Inventory of Ureaplasma urealyticum ABC transporters

Inventory of Ureaplasma urealyticum ABC transporters
NBD protein MSD protein Solute_Binding Protein      
NBD1 NBD2 MSD1 TM EAA MSD2 TM EAA SBP1 SBP2 Domain Subfamily Function
A. Importers
UU015 UU015 UU013 8 0 UU014 7 0 UU012 UU016 4 1 D-Galactose/D-Ribose?
UU093   UU092 5         UU094   3 7b Na+
UU107   UU108 6 -2 UU109 7 -1 UU110   2 5a Spermidine / Putrescine
UU200   UU199 11 -1 UU199 11 -1 UU198   8 11 phosphate
UU559 UU560 UU561 7   UU562 7 -1 UU557   1 2 Oligopeptide
                         
UU069   UU070 9 -2       UU071   3 8 iron(III)
    UU357 8   UU358 9   UU359 UU360   8 iron(III)?
    UU022 9   UU023 9 -2 UU024     8 iron(III)?
UU435   UU025 9         UU027 UU028   8 iron(III)?
    UU515 10 -2 UU516 9 -2 UU517     8 iron(III)?
    UU399 8 -2 UU400 9   UU401?     8 iron(III)?
                         
    UU041 3   UU042 3   UU043 UU045     ???
    UU048 12   UU048 12   UU047       ???
    UU579 11   UU579 11   UU578       ???
    UU223 11   UU223 11   UU224 UU225     ???
B. Exporters
UU510   UU510 5 -2           6 6 sublancin 168
UU538 UU539 UU537 5             7 12 ?
UU059 UU060 UU059     UU060         5 6 ?
UU118                     9 antibiotic

The ABC transporters are split into importers and exporters. For each ABC transporter, the nucleotide-binding domains (NBD1 and NBD2), the membrane-spanning domains (MSD1 and MSD2), and the solute-binding proteins (SBP1
and SBP2) are reported. The functions were assigned based on the similarity searches against Genbank.

TM: Transmembrane segments predicted with the PHD htm program

EAA motifs predicted with the Pattern Search.

Blue: Newer uncovered fusion protein.

Red: Newer uncovered ABC transporter components.