There are 11 copies of ISPg5 in the genome of P. gingivalis strain W83.
One copy is inserted into an ISPg1 element. One copy has an ISPg1 element inserted into it.
One copy is between two neighboring ISPg1 elements.
ISPg5 is a member of the IS3 family of IS elements. Following is the nucleic acid sequence
for a typical ISPg5. The inverted repeats are shown in
purple
, the start
and stop codons for the transposase are shown in
red.
Genome coordinates for each occurrence of ISPg5 are found in the
database
record of this insertion sequence.
1514 bp
TTGACGTGTACTGAAAAAAGTTGACAGTTGGCGGGATGCAACCAGTATCC
ATTATGGGCAAACATTTAAACAACTTTGAACGCCTTAGCATCCTTGAGGA
TTACCTCTCGGGGTCAGATAGCAAAGTAGCCATTGAGCAGAAATATGGTC
TAAGTCATGGTCTCATTCGCTCTTGGCTTCGTAAATTTGGACTCGAAGAT
AAAGTTCATCCAGTCCCAATGAAAGTGTCCCAATCCCCCCAGAGTGAGCT
ACCCCTGAACGAAAAAGAAGAATTAGAGCAGCTACGTAAAGAAAATCGTG
TCCTCAAGAGTCGTCTCAAGCGAGAAGAACTAGGGCATCAAGCCTACAAG
CTACTTGTAGAGTTGGCAGAAGAAACCTACGGCATTCAGATACGAAAAAA
CTCCGAAGCCAAGTAGTTCACCGTTTATCAGAGCCAGAGCCTAGGTATCC
TATTGCTCGACTCTGCGAACTGCTTGGCTTTAGCCGTCAGGCCTTTTATA
AACGTCATCTCAACGATTTAGCTAGGCACGAGGAGGATGTCCTATGCAGT
AGTATCATCCAATATTGTTGGCACTTAAGACAAGCAGAGCACCTACCTCA
AGCTGGCTTCCGAGAGCTCATGGTGCTTTGTCAGCAATACTTCGGCCCCA
AGTTCACGCTTGGGCGCGATCGCTTTTGCGCCCTACTCAGACGCCATGGT
ATGATGCTGCGCAAACGGTCTGTGCGCCCTCAGACAACCAACTCTCGGCA
TAGGCTCTACAAGTATGAAGACCTGCTCAATACAGAGCCTAAGTTTGTGC
CTCAAAGACCTGGGGAACTCCTTGTAGCAGACATCACCTACGTGGCTTAC
CAAGATGGGTTTGCCTATCTCTCCCTACTGACCGATGCCTATAGTCGCTG
TATCGTAGGGTATTGCTTACATCCTACCCTAGAGGTTGAAGGCTGTTTGA
ATGCTCTACATCAAGCCTTTGCTTTCTACGATCAGCATCAAATTGATACG
AGCAATATGATTCATCATAGCGACCGAGGCATTCAGTATGCCAGTAAGAG
CTACACCGATCTGTTGCATGGGCGAGGCTGTCGCATCAGCATGACTCAGA
CGGGAGATCCTCTGCATAATGCATTGGCTGAGCGGATGAACAATACGCTC
AAGAACTCGTGGCACATCTCCTCTTCGAAGCAGTCTTTTGATCAAGCACT
CCTTTCTGTAGACCGAGCCGTGCGCATGTACAACGAGGCGCGTCCACATC
AAGCTCTAGGGGCGAAAACGCCTATGCAAGTCATTGCGCCAGAGTCTAAA
AATCCGTTACTAACGAGGAGGGAGCATGGGCCAGAGATTGCCCCCGAGCT
ATACCGAAGGATGAATGTCAGACAAAGAGCTAACTTTGCTCGTGTCAACC
GAAATTAGACTTAAGGGTAAGGGGTGTCAACCTAAAGTAGAATTATAGAA
AGAACCAGTAAACCAATTGTAGAACTATCCCGCCCAACTGTCAACTTTTT
TCAGTACACGTCAA
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