BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= PG0558
(810 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34540426|ref|NP_904905.1| ATP-dependent protease La [Por... 1525 0.0
gi|154494855|ref|ZP_02033860.1| hypothetical protein PARMER... 1085 0.0
gi|150008488|ref|YP_001303231.1| ATP-dependent protease [Pa... 1069 0.0
gi|156862180|gb|EDO55611.1| hypothetical protein BACUNI_006... 977 0.0
gi|153806354|ref|ZP_01959022.1| hypothetical protein BACCAC... 974 0.0
gi|156110323|gb|EDO12068.1| hypothetical protein BACOVA_025... 972 0.0
gi|53713593|ref|YP_099585.1| ATP-dependent protease [Bacter... 970 0.0
gi|150005673|ref|YP_001300417.1| ATP-dependent protease [Ba... 923 0.0
gi|149278727|ref|ZP_01884862.1| ATP-dependent protease La [... 885 0.0
gi|89890783|ref|ZP_01202292.1| class III heat shock DNA-bin... 867 0.0
gi|83857101|ref|ZP_00950629.1| ATP-dependent protease [Croc... 864 0.0
gi|149372804|ref|ZP_01891825.1| ATP-dependent protease La [... 862 0.0
gi|88712268|ref|ZP_01106355.1| ATP-dependent protease [Flav... 858 0.0
gi|86131913|ref|ZP_01050510.1| ATP-dependent protease [Cell... 858 0.0
gi|120436204|ref|YP_861890.1| ATP-dependent protease La [Gr... 856 0.0
gi|91214809|ref|ZP_01251782.1| ATP-dependent protease [Psyc... 854 0.0
gi|88802631|ref|ZP_01118158.1| ATP-dependent protease [Pola... 853 0.0
gi|88805207|ref|ZP_01120726.1| ATP-dependent protease [Robi... 851 0.0
gi|126663821|ref|ZP_01734816.1| ATP-dependent protease La [... 850 0.0
gi|146300504|ref|YP_001195095.1| ATP-dependent protease La ... 850 0.0
gi|86133865|ref|ZP_01052447.1| ATP-dependent protease [Tena... 847 0.0
gi|150025762|ref|YP_001296588.1| S16 family, ATP-dependent ... 835 0.0
gi|86142695|ref|ZP_01061134.1| ATP-dependent protease [Flav... 831 0.0
gi|126646685|ref|ZP_01719195.1| ATP-dependent protease [Alg... 824 0.0
gi|124004961|ref|ZP_01689804.1| ATP-dependent protease La [... 809 0.0
gi|110639366|ref|YP_679575.1| ATP-dependent protease La [Cy... 799 0.0
gi|29346247|ref|NP_809750.1| ATP-dependent protease [Bacter... 689 0.0
gi|134300398|ref|YP_001113894.1| ATP-dependent protease La ... 678 0.0
gi|114567168|ref|YP_754322.1| Endopeptidase La [Syntrophomo... 675 0.0
gi|91203232|emb|CAJ72871.1| strongly similar to ATP-depende... 665 0.0
gi|118581016|ref|YP_902266.1| ATP-dependent protease La [Pe... 663 0.0
gi|89895941|ref|YP_519428.1| hypothetical protein DSY3195 [... 662 0.0
gi|121534153|ref|ZP_01665978.1| ATP-dependent protease La [... 659 0.0
gi|148262770|ref|YP_001229476.1| ATP-dependent protease La ... 658 0.0
gi|153004960|ref|YP_001379285.1| ATP-dependent protease La ... 657 0.0
gi|145620954|ref|ZP_01776962.1| ATP-dependent protease La [... 657 0.0
gi|109649194|ref|ZP_01373086.1| ATP-dependent protease La [... 657 0.0
gi|78044069|ref|YP_359193.1| ATP-dependent protease La [Car... 657 0.0
gi|110599644|ref|ZP_01387880.1| ATP-dependent protease La [... 657 0.0
gi|39998283|ref|NP_954234.1| ATP-dependent protease La [Geo... 656 0.0
gi|125972606|ref|YP_001036516.1| ATP-dependent protease La ... 653 0.0
gi|147677142|ref|YP_001211357.1| ATP-dependent Lon protease... 652 0.0
gi|86158132|ref|YP_464917.1| ATP-dependent protease La [Ana... 652 0.0
gi|51891499|ref|YP_074190.1| Lon protease [Symbiobacterium ... 651 0.0
gi|94266501|ref|ZP_01290191.1| Peptidase S16, ATP-dependent... 650 0.0
gi|120602910|ref|YP_967310.1| ATP-dependent protease La [De... 650 0.0
gi|121540675|ref|ZP_01672435.1| Endopeptidase La [Candidatu... 650 0.0
gi|46579602|ref|YP_010410.1| ATP-dependent protease La, put... 650 0.0
gi|118744367|ref|ZP_01592361.1| ATP-dependent protease La [... 649 0.0
gi|94263344|ref|ZP_01287159.1| Peptidase S16, ATP-dependent... 648 0.0
gi|113940080|ref|ZP_01425922.1| ATP-dependent protease La [... 645 0.0
gi|78357487|ref|YP_388936.1| ATP-dependent protease La [Des... 644 0.0
gi|78224405|ref|YP_386152.1| Peptidase S16, ATP-dependent p... 642 0.0
gi|94986593|ref|YP_594526.1| predicted ATP-dependent protea... 641 0.0
gi|146296519|ref|YP_001180290.1| ATP-dependent protease La ... 640 0.0
gi|108763822|ref|YP_632173.1| ATP-dependent protease La [My... 639 0.0
gi|83589395|ref|YP_429404.1| ATP-dependent protease La [Moo... 639 0.0
gi|76796021|ref|ZP_00778390.1| Peptidase S16, ATP-dependent... 638 0.0
gi|114843495|ref|ZP_01453959.1| ATP-dependent protease La [... 637 e-180
gi|77919285|ref|YP_357100.1| ATP-dependent protease La [Pel... 635 e-180
gi|20807121|ref|NP_622292.1| ATP-dependent Lon protease, ba... 633 e-179
gi|94969078|ref|YP_591126.1| ATP-dependent protease La [Aci... 633 e-179
gi|78223078|ref|YP_384825.1| Peptidase S16, ATP-dependent p... 632 e-179
gi|149917792|ref|ZP_01906287.1| ATP-dependent protease La [... 632 e-179
gi|95930401|ref|ZP_01313137.1| ATP-dependent protease La [D... 631 e-179
gi|150388894|ref|YP_001318943.1| ATP-dependent protease La ... 631 e-179
gi|138896216|ref|YP_001126669.1| Class III heat-shock ATP-d... 629 e-178
gi|154686956|ref|YP_001422117.1| LonA [Bacillus amyloliquef... 629 e-178
gi|116626097|ref|YP_828253.1| ATP-dependent protease La [So... 629 e-178
gi|126726309|ref|ZP_01742150.1| Probable ATP-dependent prot... 627 e-178
gi|148655742|ref|YP_001275947.1| ATP-dependent protease La ... 627 e-178
gi|116748161|ref|YP_844848.1| ATP-dependent protease La [Sy... 627 e-177
gi|85860155|ref|YP_462357.1| ATP-dependent protease La [Syn... 626 e-177
gi|52081303|ref|YP_080094.1| class III heat-shock ATP-depen... 625 e-177
gi|154497947|ref|ZP_02036325.1| hypothetical protein BACCAP... 625 e-177
gi|156743378|ref|YP_001433507.1| ATP-dependent protease La ... 624 e-177
gi|39996889|ref|NP_952840.1| ATP-dependent protease La [Geo... 624 e-176
gi|56697455|ref|YP_167823.1| ATP-dependent protease La [Sil... 623 e-176
gi|114327969|ref|YP_745126.1| ATP-dependent endopeptidase L... 623 e-176
gi|15605788|ref|NP_213165.1| Lon protease [Aquifex aeolicus... 623 e-176
gi|118444920|ref|YP_878860.1| ATP-dependent protease La [Cl... 622 e-176
gi|89210983|ref|ZP_01189364.1| Peptidase S16, ATP-dependent... 622 e-176
gi|94264385|ref|ZP_01288176.1| Peptidase S16, ATP-dependent... 622 e-176
gi|15603843|ref|NP_246917.1| Lon [Pasteurella multocida sub... 622 e-176
gi|119774363|ref|YP_927103.1| Endopeptidase La [Shewanella ... 622 e-176
gi|148259930|ref|YP_001234057.1| ATP-dependent protease La ... 622 e-176
gi|77360984|ref|YP_340559.1| DNA-binding ATP-dependent prot... 621 e-176
gi|126741376|ref|ZP_01757051.1| ATP-dependent protease La [... 621 e-176
gi|118738920|ref|ZP_01586999.1| ATP-dependent protease La [... 621 e-176
gi|99080616|ref|YP_612770.1| ATP-dependent protease La [Sil... 620 e-175
gi|110599105|ref|ZP_01387346.1| ATP-dependent protease La [... 620 e-175
gi|16079872|ref|NP_390698.1| class III heat-shock ATP-depen... 619 e-175
gi|89901777|ref|YP_524248.1| ATP-dependent protease La [Rho... 619 e-175
gi|114777028|ref|ZP_01452048.1| ATP-dependent protease La [... 619 e-175
gi|42525077|ref|NP_970457.1| ATP-dependent protease LA [Bde... 619 e-175
gi|126653684|ref|ZP_01725603.1| LonA [Bacillus sp. B14905] ... 619 e-175
gi|152968974|ref|YP_001334083.1| DNA-binding ATP-dependent ... 618 e-175
gi|42525197|ref|NP_970577.1| ATP-dependent protease La [Bde... 618 e-175
gi|77917645|ref|YP_355460.1| ATP-dependent protease La [Pel... 618 e-175
gi|114797553|ref|YP_759702.1| ATP-dependent protease La [Hy... 617 e-175
gi|85702911|ref|ZP_01034015.1| ATP-dependent protease La [R... 617 e-174
gi|56421185|ref|YP_148503.1| ATP-dependent Lon protease [Ge... 617 e-174
gi|106894849|ref|ZP_01361962.1| Peptidase S16, ATP-dependen... 617 e-174
gi|148263974|ref|YP_001230680.1| ATP-dependent protease La ... 615 e-174
gi|86159769|ref|YP_466554.1| ATP-dependent protease La [Ana... 615 e-174
gi|77463405|ref|YP_352909.1| Probable ATP-dependent proteas... 615 e-174
gi|115374881|ref|ZP_01462154.1| ATP-dependent protease La [... 615 e-174
gi|51246388|ref|YP_066272.1| ATP-dependent protease La [Des... 615 e-174
gi|149917074|ref|ZP_01905574.1| ATP-dependent protease La [... 615 e-174
gi|110680150|ref|YP_683157.1| ATP-dependent protease La, pu... 615 e-174
gi|119473283|ref|ZP_01614935.1| DNA-binding ATP-dependent p... 615 e-174
gi|153898937|ref|ZP_02019502.1| ATP-dependent protease La [... 615 e-174
gi|78485523|ref|YP_391448.1| ATP-dependent protease La [Thi... 615 e-174
gi|144899462|emb|CAM76326.1| Peptidase S16, ATP-dependent p... 615 e-174
gi|85859382|ref|YP_461584.1| ATP-dependent protease La [Syn... 615 e-174
gi|304908|gb|AAA16837.1| ATP-dependent protease 614 e-174
gi|17546432|ref|NP_519834.1| PROBABLE ATP-DEPENDENT PROTEAS... 614 e-174
gi|153888474|ref|ZP_02009616.1| ATP-dependent protease La [... 614 e-174
gi|48727705|gb|AAT46132.1| Lon protease [Bartonella henselae] 614 e-173
gi|108763928|ref|YP_630246.1| ATP-dependent protease La [My... 613 e-173
gi|49475382|ref|YP_033423.1| ATP-dependent protease lon [Ba... 613 e-173
gi|114563760|ref|YP_751273.1| ATP-dependent protease La [Sh... 613 e-173
gi|153955958|ref|YP_001396723.1| Lon [Clostridium kluyveri ... 613 e-173
gi|23099531|ref|NP_692997.1| ATP-dependent proteinase La 1 ... 613 e-173
gi|83745915|ref|ZP_00942972.1| ATP-dependent protease LA [R... 613 e-173
gi|49474141|ref|YP_032183.1| ATP-dependent protease lon [Ba... 613 e-173
gi|85708102|ref|ZP_01039168.1| ATP-dependent Lon protease [... 612 e-173
gi|92117750|ref|YP_577479.1| ATP-dependent protease La [Nit... 612 e-173
gi|83592887|ref|YP_426639.1| Peptidase S16, ATP-dependent p... 612 e-173
gi|118047139|ref|ZP_01515780.1| ATP-dependent protease La [... 612 e-173
gi|146277205|ref|YP_001167364.1| ATP-dependent protease La ... 612 e-173
gi|114330973|ref|YP_747195.1| ATP-dependent protease La [Ni... 612 e-173
gi|83311889|ref|YP_422153.1| ATP-dependent Lon protease [Ma... 612 e-173
gi|94264493|ref|ZP_01288280.1| Peptidase S16, ATP-dependent... 611 e-173
gi|117926914|ref|YP_867531.1| ATP-dependent protease La [Ma... 611 e-173
gi|154247520|ref|YP_001418478.1| ATP-dependent protease La ... 611 e-173
gi|30061941|ref|NP_836112.1| DNA-binding, ATP-dependent pro... 611 e-173
gi|126700920|ref|YP_001089817.1| ATP-dependent protease La ... 610 e-173
gi|27380053|ref|NP_771582.1| ATP-dependent protease LA [Bra... 610 e-172
gi|146644|gb|AAA24079.1| ATP-dependent proteinase (lon) 610 e-172
gi|77918205|ref|YP_356020.1| La-like protease [Pelobacter c... 610 e-172
gi|126462261|ref|YP_001043375.1| ATP-dependent protease La ... 610 e-172
gi|83858426|ref|ZP_00951948.1| ATP-dependent protease LA [O... 610 e-172
gi|94266599|ref|ZP_01290281.1| Peptidase S16, ATP-dependent... 610 e-172
gi|156935008|ref|YP_001438924.1| hypothetical protein ESA_0... 609 e-172
gi|90423895|ref|YP_532265.1| ATP-dependent protease La [Rho... 609 e-172
gi|86137496|ref|ZP_01056073.1| ATP-dependent protease La [R... 609 e-172
gi|146307080|ref|YP_001187545.1| ATP-dependent protease La ... 609 e-172
gi|154253668|ref|YP_001414492.1| ATP-dependent protease La ... 609 e-172
gi|89098930|ref|ZP_01171810.1| LonA [Bacillus sp. NRRL B-14... 608 e-172
gi|39936024|ref|NP_948300.1| ATP-dependent protease Lon [Rh... 608 e-172
gi|77919578|ref|YP_357393.1| ATP-dependent protease La [Pel... 608 e-172
gi|16759430|ref|NP_455047.1| Lon protease [Salmonella enter... 608 e-172
gi|153006261|ref|YP_001380586.1| ATP-dependent protease La ... 608 e-172
gi|148825258|ref|YP_001290011.1| ATP-dependent proteinase [... 608 e-172
gi|28569594|gb|AAO43974.1| Lon protease [Brevibacillus ther... 608 e-172
gi|16763831|ref|NP_459446.1| ATP-dependent protease Lon [Sa... 608 e-172
gi|91977362|ref|YP_570021.1| ATP-dependent protease La [Rho... 607 e-172
gi|75177623|ref|ZP_00697704.1| COG0466: ATP-dependent Lon p... 607 e-172
gi|84684911|ref|ZP_01012811.1| ATP-dependent protease La [R... 607 e-172
gi|91786827|ref|YP_547779.1| ATP-dependent protease La [Pol... 607 e-172
gi|16128424|ref|NP_414973.1| DNA-binding ATP-dependent prot... 607 e-172
gi|145640434|ref|ZP_01796018.1| nucleoside triphosphate pyr... 607 e-172
gi|85716435|ref|ZP_01047407.1| peptidase S16, ATP-dependent... 607 e-172
gi|145634541|ref|ZP_01790250.1| ATP-dependent proteinase [H... 607 e-171
gi|145636270|ref|ZP_01791939.1| ATP-dependent proteinase [H... 607 e-171
gi|75676088|ref|YP_318509.1| peptidase S16, ATP-dependent p... 607 e-171
gi|26246450|ref|NP_752489.1| ATP-dependent protease La [Esc... 607 e-171
gi|150396097|ref|YP_001326564.1| ATP-dependent protease La ... 607 e-171
gi|46579748|ref|YP_010556.1| ATP-dependent protease La [Des... 607 e-171
gi|120602776|ref|YP_967176.1| ATP-dependent protease La [De... 607 e-171
gi|117622699|ref|YP_851612.1| DNA-binding ATP-dependent pro... 607 e-171
gi|56964399|ref|YP_176130.1| ATP-dependent Lon protease [Ba... 607 e-171
gi|86749683|ref|YP_486179.1| ATP-dependent protease La [Rho... 607 e-171
gi|91775764|ref|YP_545520.1| ATP-dependent protease La [Met... 606 e-171
gi|88810609|ref|ZP_01125866.1| ATP-dependent protease La [N... 606 e-171
gi|114048053|ref|YP_738603.1| ATP-dependent protease La [Sh... 606 e-171
gi|145632728|ref|ZP_01788462.1| nucleoside triphosphate pyr... 606 e-171
gi|6175841|gb|AAF05300.1|AF167159_1 Lon protease [Sinorhizo... 606 e-171
gi|90410784|ref|ZP_01218799.1| putative ATP-dependent prote... 606 e-171
gi|69937874|ref|ZP_00632460.1| Peptidase S16, ATP-dependent... 606 e-171
gi|15829747|ref|NP_308520.1| endopeptidase La [Escherichia ... 606 e-171
gi|115524519|ref|YP_781430.1| ATP-dependent protease La [Rh... 606 e-171
gi|157084149|gb|ABV13827.1| hypothetical protein CKO_02721 ... 605 e-171
gi|94968586|ref|YP_590634.1| ATP-dependent protease La [Aci... 605 e-171
gi|54309796|ref|YP_130816.1| putative ATP-dependent proteas... 605 e-171
gi|121542996|ref|ZP_01674701.1| Endopeptidase La [Candidatu... 605 e-171
gi|113970828|ref|YP_734621.1| ATP-dependent protease La [Sh... 605 e-171
gi|118732941|ref|ZP_01581454.1| ATP-dependent protease La [... 605 e-171
gi|127513434|ref|YP_001094631.1| ATP-dependent protease La ... 605 e-171
gi|77956935|ref|ZP_00821007.1| COG0466: ATP-dependent Lon p... 605 e-171
gi|78046639|ref|YP_362814.1| endopeptidase La [Xanthomonas ... 605 e-171
gi|148827659|ref|YP_001292412.1| nucleoside triphosphate py... 605 e-171
gi|145630359|ref|ZP_01786140.1| ATP-dependent proteinase [H... 605 e-171
gi|21230441|ref|NP_636358.1| ATP-dependent serine proteinas... 605 e-171
gi|117921100|ref|YP_870292.1| ATP-dependent protease La [Sh... 605 e-171
gi|85058651|ref|YP_454353.1| ATP-dependent protease Lon [So... 605 e-171
gi|146341125|ref|YP_001206173.1| ATP-dependent protease La ... 605 e-171
gi|103486290|ref|YP_615851.1| ATP-dependent protease La [Sp... 605 e-171
gi|21241840|ref|NP_641422.1| ATP-dependent serine proteinas... 604 e-171
gi|77635227|ref|ZP_00797314.1| COG0466: ATP-dependent Lon p... 604 e-171
gi|113460634|ref|YP_718700.1| ATP-dependent protease La [Ha... 604 e-171
gi|46156600|ref|ZP_00132426.2| COG0466: ATP-dependent Lon p... 604 e-171
gi|76260431|ref|ZP_00768067.1| Peptidase S16, ATP-dependent... 604 e-171
gi|42629917|ref|ZP_00155462.1| COG0466: ATP-dependent Lon p... 604 e-171
gi|42630758|ref|ZP_00156297.1| COG0466: ATP-dependent Lon p... 604 e-171
gi|92114166|ref|YP_574094.1| ATP-dependent protease La [Chr... 604 e-171
gi|77962324|ref|ZP_00826145.1| COG0466: ATP-dependent Lon p... 604 e-171
gi|16123317|ref|NP_406630.1| ATP-dependent protease La [Yer... 604 e-170
gi|22124936|ref|NP_668359.1| DNA-binding ATP-dependent prot... 603 e-170
gi|24373362|ref|NP_717405.1| ATP-dependent protease La [She... 603 e-170
gi|153854551|ref|ZP_01995821.1| hypothetical protein DORLON... 603 e-170
gi|82703216|ref|YP_412782.1| ATP-dependent protease La [Nit... 603 e-170
gi|119875977|ref|ZP_01643030.1| ATP-dependent protease La [... 603 e-170
gi|118070384|ref|ZP_01538613.1| ATP-dependent protease La [... 603 e-170
gi|27904900|ref|NP_778026.1| ATP-dependent protease La [Buc... 603 e-170
gi|77979389|ref|ZP_00834808.1| COG0466: ATP-dependent Lon p... 603 e-170
gi|28198388|ref|NP_778702.1| ATP-dependent serine proteinas... 603 e-170
gi|149181758|ref|ZP_01860249.1| class III heat-shock ATP-de... 603 e-170
gi|68249064|ref|YP_248176.1| ATP-dependent protease La [Hae... 603 e-170
gi|37527727|ref|NP_931072.1| endopeptidase La, DNA-binding,... 603 e-170
gi|15965010|ref|NP_385363.1| PROBABLE ATP-DEPENDENT PROTEAS... 603 e-170
gi|146310567|ref|YP_001175641.1| ATP-dependent protease La ... 603 e-170
gi|77974301|ref|ZP_00829842.1| COG0466: ATP-dependent Lon p... 603 e-170
gi|15617075|ref|NP_240288.1| ATP-dependent protease LA [Buc... 603 e-170
gi|77164885|ref|YP_343410.1| Peptidase S16, ATP-dependent p... 603 e-170
gi|148244365|ref|YP_001219059.1| ATP-dependent protease La ... 603 e-170
gi|149186801|ref|ZP_01865111.1| ATP-dependent Lon protease ... 602 e-170
gi|120610144|ref|YP_969822.1| ATP-dependent protease La [Ac... 602 e-170
gi|16272410|ref|NP_438623.1| ATP-dependent proteinase [Haem... 602 e-170
gi|15800169|ref|NP_286181.1| DNA-binding, ATP-dependent pro... 602 e-170
gi|145298873|ref|YP_001141714.1| ATP-dependent protease La ... 602 e-170
gi|3913995|sp|P77810|LON_AZOBR ATP-dependent protease La >g... 602 e-170
gi|109899439|ref|YP_662694.1| ATP-dependent protease La [Ps... 602 e-170
gi|89068847|ref|ZP_01156230.1| ATP-dependent protease La [O... 602 e-170
gi|148255921|ref|YP_001240506.1| ATP-dependent protease La ... 602 e-170
gi|114764586|ref|ZP_01443790.1| ATP-dependent protease La [... 602 e-170
gi|94310821|ref|YP_584031.1| ATP-dependent protease La [Ral... 602 e-170
gi|90419401|ref|ZP_01227311.1| ATP-dependent protease La [A... 602 e-170
gi|120599412|ref|YP_963986.1| ATP-dependent protease La [Sh... 601 e-170
gi|86357226|ref|YP_469118.1| ATP-dependent protease LA prot... 601 e-170
gi|91203295|emb|CAJ72934.1| strongly similar to endopeptida... 601 e-170
gi|110633524|ref|YP_673732.1| ATP-dependent protease La [Me... 601 e-170
gi|37679290|ref|NP_933899.1| ATP-dependent Lon protease, ba... 600 e-170
gi|50120089|ref|YP_049256.1| ATP-dependent protease la [Erw... 600 e-170
gi|153813470|ref|ZP_01966138.1| hypothetical protein RUMOBE... 600 e-169
gi|547865|sp|P36772|LON_BRECH ATP-dependent protease La >gi... 600 e-169
gi|68055112|ref|ZP_00539260.1| Peptidase S16, ATP-dependent... 600 e-169
gi|153000124|ref|YP_001365805.1| ATP-dependent protease La ... 600 e-169
gi|113933618|ref|ZP_01419520.1| ATP-dependent protease La [... 600 e-169
gi|53805230|ref|YP_113050.1| ATP-dependent protease La [Met... 600 e-169
gi|126729592|ref|ZP_01745405.1| ATP-dependent protease La [... 600 e-169
gi|46198726|ref|YP_004393.1| ATP-dependent protease La [The... 600 e-169
gi|29654074|ref|NP_819766.1| ATP-dependent protease La [Cox... 600 e-169
gi|82703455|ref|YP_413021.1| ATP-dependent protease La [Nit... 600 e-169
gi|114321435|ref|YP_743118.1| ATP-dependent protease La [Al... 600 e-169
gi|58580658|ref|YP_199674.1| ATP-dependent serine proteinas... 600 e-169
gi|71276513|ref|ZP_00652788.1| Peptidase S16, ATP-dependent... 600 e-169
gi|126735585|ref|ZP_01751330.1| ATP-dependent protease La, ... 600 e-169
gi|65321839|ref|ZP_00394798.1| COG0466: ATP-dependent Lon p... 599 e-169
gi|86148520|ref|ZP_01066808.1| ATP-dependent protease LA [V... 599 e-169
gi|56460111|ref|YP_155392.1| ATP-dependent Lon protease [Id... 599 e-169
gi|146282420|ref|YP_001172573.1| ATP-dependent protease [Ps... 599 e-169
gi|75514563|ref|ZP_00736818.1| COG0466: ATP-dependent Lon p... 599 e-169
gi|126173840|ref|YP_001049989.1| ATP-dependent protease La ... 599 e-169
gi|15837791|ref|NP_298479.1| ATP-dependent serine proteinas... 599 e-169
gi|89073232|ref|ZP_01159762.1| putative ATP-dependent prote... 599 e-169
gi|121605846|ref|YP_983175.1| ATP-dependent protease La [Po... 599 e-169
gi|152978446|ref|YP_001344075.1| ATP-dependent protease La ... 599 e-169
gi|90579276|ref|ZP_01235086.1| putative ATP-dependent prote... 599 e-169
gi|114771034|ref|ZP_01448474.1| Probable ATP-dependent prot... 598 e-169
gi|95926423|ref|ZP_01309212.1| hypothetical protein CburR_0... 598 e-169
gi|1170812|sp|P46067|LON_ERWAM ATP-dependent protease La >g... 598 e-169
gi|91783522|ref|YP_558728.1| Peptidase S16, ATP-dependent p... 598 e-169
gi|114569890|ref|YP_756570.1| ATP-dependent protease La [Ma... 598 e-169
gi|21672726|ref|NP_660793.1| ATP-dependent protease LA [Buc... 598 e-169
gi|58038573|ref|YP_190537.1| ATP-dependent protease La [Glu... 598 e-169
gi|83719717|ref|YP_442645.1| ATP-dependent protease La [Bur... 598 e-169
gi|156973714|ref|YP_001444621.1| hypothetical protein VIBHA... 598 e-169
gi|83943255|ref|ZP_00955715.1| ATP-dependent protease La [S... 598 e-169
gi|124523506|ref|ZP_01697585.1| ATP-dependent protease La [... 598 e-169
gi|53719041|ref|YP_108027.1| ATP-dependent protease [Burkho... 598 e-169
gi|118038228|ref|ZP_01509633.1| ATP-dependent protease La [... 598 e-169
gi|118479636|ref|YP_896787.1| ATP-dependent protease La 1 [... 598 e-169
gi|83954390|ref|ZP_00963110.1| ATP-dependent protease La [S... 598 e-169
gi|149202806|ref|ZP_01879778.1| ATP-dependent protease La [... 598 e-169
gi|13476996|ref|NP_108566.1| ATP-dependent protease Lon [Me... 598 e-169
gi|30249257|ref|NP_841327.1| lonA; ATP-dependent proteinase... 598 e-169
gi|89205270|ref|ZP_01183841.1| Peptidase S16, ATP-dependent... 598 e-169
gi|89055009|ref|YP_510460.1| ATP-dependent protease La [Jan... 597 e-169
gi|126207860|ref|YP_001053085.1| ATP-dependent protease La ... 597 e-169
gi|116251456|ref|YP_767294.1| putative ATP-dependent protea... 597 e-169
gi|117621379|ref|YP_856544.1| ATP-dependent protease La [Ae... 597 e-169
gi|91228615|ref|ZP_01262533.1| ATP-dependent protease LA [V... 597 e-168
gi|84503010|ref|ZP_01001112.1| ATP-dependent protease La [O... 597 e-168
gi|30264538|ref|NP_846915.1| ATP-dependent protease La 1 [B... 597 e-168
gi|49187362|ref|YP_030614.1| ATP-dependent protease La 1 [B... 597 e-168
gi|148977890|ref|ZP_01814443.1| ATP-dependent protease LA [... 597 e-168
gi|116621146|ref|YP_823302.1| ATP-dependent protease La [So... 597 e-168
gi|91793845|ref|YP_563496.1| ATP-dependent protease La [She... 597 e-168
gi|118028958|ref|ZP_01500419.1| ATP-dependent protease La [... 597 e-168
gi|149913778|ref|ZP_01902310.1| ATP-dependent protease La [... 597 e-168
gi|42783607|ref|NP_980854.1| ATP-dependent protease La 1 [B... 596 e-168
gi|73541076|ref|YP_295596.1| Peptidase S16, ATP-dependent p... 596 e-168
gi|28897693|ref|NP_797298.1| ATP-dependent protease LA [Vib... 596 e-168
gi|121602500|ref|YP_988862.1| ATP-dependent protease La [Ba... 596 e-168
gi|1655939|gb|AAC44747.1| lon protease [Vibrio parahaemolyt... 596 e-168
gi|154706904|ref|YP_001424148.1| ATP-dependent protease La ... 596 e-168
gi|153209301|ref|ZP_01947336.1| ATP-dependent protease La [... 596 e-168
gi|28211964|ref|NP_782908.1| ATP-dependent protease La [Clo... 596 e-168
gi|91205612|ref|YP_537967.1| ATP-dependent protease La [Ric... 596 e-168
gi|94676556|ref|YP_588713.1| ATP-dependent protease La [Bau... 595 e-168
gi|71892081|ref|YP_277811.1| DNA-binding ATP-dependent prot... 595 e-168
gi|119503319|ref|ZP_01625403.1| Endopeptidase La [marine ga... 595 e-168
gi|46143236|ref|ZP_00135629.2| COG0466: ATP-dependent Lon p... 595 e-168
gi|47566660|ref|ZP_00237482.1| ATP-dependent protease La [B... 595 e-168
gi|148258942|ref|YP_001243527.1| DNA-binding ATP-dependent ... 595 e-168
gi|52141040|ref|YP_085793.1| endopeptidase La (ATP-dependen... 595 e-168
gi|16126203|ref|NP_420767.1| ATP-dependent protease LA [Cau... 595 e-168
gi|15597000|ref|NP_250494.1| Lon protease [Pseudomonas aeru... 595 e-168
gi|84387737|ref|ZP_00990753.1| ATP-dependent protease LA [V... 595 e-168
gi|71734411|ref|YP_273937.1| ATP-dependent protease La [Pse... 595 e-168
gi|113937842|ref|ZP_01423715.1| ATP-dependent protease La [... 595 e-168
gi|49478648|ref|YP_038520.1| endopeptidase La (ATP-dependen... 595 e-168
gi|113867498|ref|YP_725987.1| ATP-dependent Lon protease [R... 595 e-168
gi|118590044|ref|ZP_01547448.1| probable atp-dependent prot... 595 e-168
gi|110599215|ref|ZP_01387455.1| ATP-dependent protease La [... 594 e-168
gi|148263317|ref|YP_001230023.1| ATP-dependent protease La ... 594 e-168
gi|30022558|ref|NP_834189.1| ATP-dependent protease La [Bac... 594 e-168
gi|82775654|ref|YP_402001.1| DNA-binding, ATP-dependent pro... 594 e-168
gi|76260837|ref|ZP_00768465.1| Peptidase S16, ATP-dependent... 594 e-168
gi|121603730|ref|YP_981059.1| ATP-dependent protease La [Po... 594 e-168
gi|148656894|ref|YP_001277099.1| ATP-dependent protease La ... 594 e-168
gi|70731344|ref|YP_261085.1| ATP-dependent protease La [Pse... 594 e-168
gi|153009534|ref|YP_001370749.1| ATP-dependent protease La ... 594 e-168
gi|59711405|ref|YP_204181.1| ATP-dependent protease La [Vib... 594 e-168
gi|66044994|ref|YP_234835.1| Peptidase S16, ATP-dependent p... 594 e-168
gi|134277086|ref|ZP_01763801.1| ATP-dependent protease La [... 594 e-168
gi|156718799|ref|ZP_02060457.1| ATP-dependent protease La [... 594 e-168
gi|62549363|gb|AAX87000.1| ATP-dependent protease [Pseudomo... 594 e-167
gi|91787908|ref|YP_548860.1| ATP-dependent protease La [Pol... 593 e-167
gi|114707246|ref|ZP_01440144.1| probable atp-dependent prot... 593 e-167
gi|118047620|ref|ZP_01516252.1| ATP-dependent protease La [... 593 e-167
gi|22532108|gb|AAM97840.1|AF447727_2 Lon protease [Pseudomo... 593 e-167
gi|152976885|ref|YP_001376402.1| ATP-dependent protease La ... 593 e-167
gi|124516391|gb|EAY57899.1| ATP-dependent Lon protease, bac... 593 e-167
gi|152987172|ref|YP_001348852.1| ATP-dependent protease La ... 593 e-167
gi|15641922|ref|NP_231554.1| ATP-dependent protease LA [Vib... 593 e-167
gi|116049753|ref|YP_791440.1| Lon protease [Pseudomonas aer... 593 e-167
gi|77165151|ref|YP_343676.1| Peptidase S16, ATP-dependent p... 593 e-167
gi|15615612|ref|NP_243916.1| ATP-dependent proteinase La 1 ... 593 e-167
gi|84362131|ref|ZP_00986767.1| COG0466: ATP-dependent Lon p... 593 e-167
gi|121611287|ref|YP_999094.1| ATP-dependent protease La [Ve... 593 e-167
gi|71907346|ref|YP_284933.1| Peptidase S16, ATP-dependent p... 593 e-167
gi|71900576|ref|ZP_00682703.1| Peptidase S16, ATP-dependent... 593 e-167
gi|87199382|ref|YP_496639.1| ATP-dependent protease La [Nov... 592 e-167
gi|67153454|ref|ZP_00415199.1| Peptidase S16, ATP-dependent... 592 e-167
gi|52842084|ref|YP_095883.1| ATP-dependent protease La [Leg... 592 e-167
gi|118053702|ref|ZP_01522245.1| ATP-dependent protease La [... 592 e-167
gi|148359404|ref|YP_001250611.1| hypothetical protein LPC_1... 592 e-167
gi|94493373|ref|ZP_01300577.1| hypothetical protein Rgryl_0... 592 e-167
gi|78066691|ref|YP_369460.1| Peptidase S16, ATP-dependent p... 592 e-167
gi|71280534|ref|YP_270450.1| ATP-dependent protease La [Col... 592 e-167
gi|28870879|ref|NP_793498.1| ATP-dependent protease La [Pse... 592 e-167
gi|109728790|ref|ZP_01380201.1| hypothetical protein RbelO_... 592 e-167
gi|84515537|ref|ZP_01002899.1| Probable ATP-dependent prote... 592 e-167
gi|54294746|ref|YP_127161.1| hypothetical protein lpl1823 [... 592 e-167
gi|153093538|gb|EDN74518.1| S16 family endopeptidase La [Ma... 592 e-167
gi|148559658|ref|YP_001259028.1| ATP-dependent protease La ... 591 e-167
gi|33152266|ref|NP_873619.1| ATP-dependent protease LA [Hae... 591 e-167
gi|1667399|gb|AAB18765.1| lon protease [Caulobacter crescen... 591 e-167
gi|110799208|ref|YP_696085.1| ATP-dependent protease La [Cl... 591 e-167
gi|18310372|ref|NP_562306.1| ATP-dependent protease La [Clo... 591 e-167
gi|15888590|ref|NP_354271.1| hypothetical protein AGR_C_232... 591 e-167
gi|134295956|ref|YP_001119691.1| ATP-dependent protease La ... 591 e-167
gi|107028900|ref|YP_625995.1| ATP-dependent protease La [Bu... 591 e-167
gi|94497481|ref|ZP_01304051.1| ATP-dependent protease La [S... 591 e-167
gi|118701487|ref|ZP_01559547.1| ATP-dependent protease La [... 590 e-167
gi|118718347|ref|ZP_01570880.1| ATP-dependent protease La [... 590 e-167
gi|56551272|ref|YP_162111.1| ATP-dependent Lon protease [Zy... 590 e-167
gi|33596624|ref|NP_884267.1| ATP-dependent protease La [Bor... 590 e-166
gi|118712171|ref|ZP_01564743.1| ATP-dependent protease La [... 590 e-166
gi|156742524|ref|YP_001432653.1| ATP-dependent protease La ... 590 e-166
gi|154506028|ref|ZP_02042766.1| hypothetical protein RUMGNA... 590 e-166
gi|118594829|ref|ZP_01552176.1| ATP-dependent protease La [... 590 e-166
gi|145618254|ref|ZP_01774314.1| ATP-dependent protease La [... 590 e-166
gi|77459917|ref|YP_349424.1| Peptidase S16, ATP-dependent p... 590 e-166
gi|115351960|ref|YP_773799.1| ATP-dependent protease La [Bu... 590 e-166
gi|42523611|ref|NP_968991.1| ATP-dependent protease LA [Bde... 590 e-166
gi|121634924|ref|YP_975169.1| putative ATP-dependent protea... 590 e-166
gi|33601239|ref|NP_888799.1| ATP-dependent protease La [Bor... 590 e-166
gi|52425899|ref|YP_089036.1| Lon protein [Mannheimia succin... 590 e-166
gi|118602252|ref|YP_903467.1| ATP-dependent protease La [Ca... 590 e-166
gi|95931266|ref|ZP_01313985.1| ATP-dependent protease La [D... 590 e-166
gi|115422587|emb|CAJ49112.1| ATP-dependent protease La [Bor... 590 e-166
gi|118725349|ref|ZP_01573991.1| ATP-dependent protease La [... 589 e-166
gi|33592844|ref|NP_880488.1| ATP-dependent protease La [Bor... 589 e-166
gi|84321265|ref|ZP_00969623.1| COG0466: ATP-dependent Lon p... 589 e-166
gi|110802868|ref|YP_698701.1| ATP-dependent protease La [Cl... 589 e-166
gi|148270288|ref|YP_001244748.1| ATP-dependent protease La ... 589 e-166
gi|148553316|ref|YP_001260898.1| ATP-dependent protease La ... 588 e-166
gi|153835693|ref|ZP_01988360.1| ATP-dependent protease La [... 588 e-166
gi|78357261|ref|YP_388710.1| ATP-dependent protease La [Des... 588 e-166
gi|156867408|gb|EDO60780.1| hypothetical protein CLOLEP_023... 588 e-166
gi|85373565|ref|YP_457627.1| ATP-dependent Lon protease [Er... 588 e-166
gi|39996026|ref|NP_951977.1| ATP-dependent protease La [Geo... 588 e-166
gi|15644381|ref|NP_229433.1| ATP-dependent protease LA [The... 588 e-166
gi|27381285|ref|NP_772814.1| ATP-dependent protease LA [Bra... 588 e-166
gi|90407418|ref|ZP_01215602.1| ATP-dependent protease La [P... 588 e-166
gi|62290021|ref|YP_221814.1| Lon, ATP-dependent protease La... 588 e-166
gi|15794311|ref|NP_284133.1| ATP-dependent protease [Neisse... 587 e-166
gi|56478267|ref|YP_159856.1| ATP-dependent protease La [Azo... 587 e-166
gi|46199052|ref|YP_004719.1| ATP-dependent protease La [The... 587 e-166
gi|55981080|ref|YP_144377.1| alternative ATP-dependent prot... 587 e-165
gi|38257878|sp|Q8YHC6|LON_BRUME ATP-dependent protease La 587 e-165
gi|33519763|ref|NP_878595.1| Lon protease [Candidatus Bloch... 587 e-165
gi|119713089|gb|ABL97158.1| ATP-dependent Lon protease [unc... 587 e-165
gi|17987159|ref|NP_539793.1| ATP-DEPENDENT PROTEASE LA [Bru... 587 e-165
gi|2801672|gb|AAB97420.1| ATP-dependent serine protease [Br... 587 e-165
gi|118045922|ref|ZP_01514577.1| ATP-dependent protease La [... 587 e-165
gi|119945203|ref|YP_942883.1| ATP-dependent protease La [Ps... 586 e-165
gi|15677103|ref|NP_274255.1| ATP-dependent protease La [Nei... 586 e-165
gi|94984535|ref|YP_603899.1| ATP-dependent protease La [Dei... 586 e-165
gi|84703727|ref|ZP_01017555.1| ATP-dependent protease LA [P... 586 e-165
gi|121997402|ref|YP_001002189.1| ATP-dependent protease La ... 586 e-165
gi|23501984|ref|NP_698111.1| ATP-dependent protease La [Bru... 586 e-165
gi|90417348|ref|ZP_01225273.1| Lon protease [marine gamma p... 586 e-165
gi|90021257|ref|YP_527084.1| Endopeptidase La [Saccharophag... 585 e-165
gi|51473639|ref|YP_067396.1| ATP-dependent protease La. [Ri... 585 e-165
gi|153814161|ref|ZP_01966829.1| hypothetical protein RUMTOR... 585 e-165
gi|74317693|ref|YP_315433.1| peptidase S16, ATP-dependent p... 585 e-165
gi|87121306|ref|ZP_01077196.1| ATP-dependent Lon protease [... 585 e-165
gi|152980598|ref|YP_001353223.1| ATP-dependent Lon protease... 584 e-165
gi|149376710|ref|ZP_01894468.1| ATP-dependent protease La [... 584 e-165
gi|153839643|ref|ZP_01992310.1| ATP-dependent protease La [... 583 e-164
gi|59801189|ref|YP_207901.1| Lon [Neisseria gonorrhoeae FA ... 583 e-164
gi|145619156|ref|ZP_01775208.1| ATP-dependent protease La [... 583 e-164
gi|78223741|ref|YP_385488.1| Peptidase S16, ATP-dependent p... 583 e-164
gi|116747549|ref|YP_844236.1| ATP-dependent protease La [Sy... 583 e-164
gi|119898360|ref|YP_933573.1| ATP-dependent protease La [Az... 583 e-164
gi|67642016|ref|ZP_00440779.1| COG0466: ATP-dependent Lon p... 582 e-164
gi|32490902|ref|NP_871156.1| hypothetical protein WGLp153 [... 581 e-164
gi|148554068|ref|YP_001261650.1| ATP-dependent protease La ... 581 e-164
gi|134094956|ref|YP_001100031.1| DNA-binding ATP-dependent ... 580 e-164
gi|148322462|gb|EDK87712.1| S16 family endopeptidase La [Fu... 580 e-163
gi|15604315|ref|NP_220831.1| ATP-DEPENDENT PROTEASE LA (lon... 580 e-163
gi|19705310|ref|NP_602805.1| ATP-dependent protease La [Fus... 580 e-163
gi|102191820|ref|ZP_01347632.1| hypothetical protein RcanM_... 580 e-163
gi|150386988|ref|ZP_01925460.1| ATP-dependent protease La [... 580 e-163
gi|152995751|ref|YP_001340586.1| ATP-dependent protease La ... 580 e-163
gi|118746465|ref|ZP_01594404.1| ATP-dependent protease La [... 579 e-163
gi|145589119|ref|YP_001155716.1| ATP-dependent protease La ... 579 e-163
gi|124266487|ref|YP_001020491.1| Endopeptidase La [Methylib... 579 e-163
gi|104781015|ref|YP_607513.1| DNA-binding ATP-dependent pro... 578 e-163
gi|153932749|ref|YP_001385552.1| ATP-dependent protease La ... 578 e-163
gi|148381177|ref|YP_001255718.1| ATP-dependent Lon protease... 578 e-163
gi|120554756|ref|YP_959107.1| ATP-dependent protease La [Ma... 578 e-163
gi|121593623|ref|YP_985519.1| ATP-dependent protease La [Ac... 578 e-163
gi|107101235|ref|ZP_01365153.1| hypothetical protein PaerPA... 578 e-163
gi|52698929|ref|ZP_00340337.1| COG0466: ATP-dependent Lon p... 577 e-163
gi|71083581|ref|YP_266300.1| ATP-dependent protease La [Can... 576 e-162
gi|110601746|ref|ZP_01389917.1| ATP-dependent protease La [... 576 e-162
gi|148657914|ref|YP_001278119.1| ATP-dependent protease La ... 576 e-162
gi|88657790|ref|YP_507693.1| ATP-dependent protease La [Ehr... 575 e-162
gi|15895895|ref|NP_349244.1| ATP-dependent Lon protease [Cl... 575 e-162
gi|144225717|emb|CAM84203.1| Lon ATP-dependent protease [Ps... 575 e-162
gi|91761998|ref|ZP_01263963.1| ATP-dependent protease La [C... 575 e-162
gi|106886225|ref|ZP_01353570.1| ATP-dependent protease La [... 575 e-162
gi|146329872|ref|YP_001209152.1| ATP-dependent protease La ... 575 e-162
gi|153938644|ref|YP_001392579.1| ATP-dependent protease La ... 575 e-162
gi|150021369|ref|YP_001306723.1| ATP-dependent protease La ... 574 e-162
gi|89900348|ref|YP_522819.1| ATP-dependent protease La [Rho... 574 e-162
gi|126668933|ref|ZP_01739874.1| ATP-dependent protease La [... 574 e-162
gi|88606840|ref|YP_505535.1| ATP-dependent protease La [Ana... 573 e-161
gi|67459084|ref|YP_246708.1| ATP-dependent protease La [Ric... 573 e-161
gi|126360126|ref|ZP_01717114.1| ATP-dependent protease La [... 573 e-161
gi|34498010|ref|NP_902225.1| endopeptidase La [Chromobacter... 573 e-161
gi|73666836|ref|YP_302852.1| Peptidase S16, ATP-dependent p... 573 e-161
gi|76261289|ref|ZP_00768905.1| Peptidase S16, ATP-dependent... 573 e-161
gi|119859502|ref|ZP_01640916.1| ATP-dependent protease La [... 573 e-161
gi|94986252|ref|YP_605616.1| ATP-dependent protease La [Dei... 573 e-161
gi|150016212|ref|YP_001308466.1| ATP-dependent protease La ... 572 e-161
gi|26989026|ref|NP_744451.1| ATP-dependent protease La [Pse... 572 e-161
gi|148655610|ref|YP_001275815.1| ATP-dependent protease La ... 572 e-161
gi|42520202|ref|NP_966117.1| ATP-dependent protease La [Wol... 572 e-161
gi|156740991|ref|YP_001431120.1| ATP-dependent protease La ... 572 e-161
gi|148548675|ref|YP_001268777.1| ATP-dependent protease La ... 572 e-161
gi|83644981|ref|YP_433416.1| ATP-dependent protease La [Hah... 571 e-161
gi|84622591|ref|YP_449963.1| ATP-dependent serine proteinas... 571 e-161
gi|57238935|ref|YP_180071.1| ATP-dependent protease La [Ehr... 569 e-160
gi|134034154|sp|Q92HZ1|LON_RICCN ATP-dependent protease La 569 e-160
gi|118047971|ref|ZP_01516594.1| ATP-dependent protease La [... 569 e-160
gi|15892552|ref|NP_360266.1| ATP-dependent protease La [EC:... 569 e-160
gi|15639514|ref|NP_218964.1| ATP-dependent protease LA (lon... 568 e-160
gi|118581608|ref|YP_902858.1| ATP-dependent protease La [Pe... 568 e-160
gi|34762744|ref|ZP_00143733.1| ATP-dependent protease La [F... 568 e-160
gi|118035544|ref|ZP_01506952.1| ATP-dependent protease La [... 567 e-159
gi|153823841|ref|ZP_01976508.1| ATP-dependent protease LA [... 566 e-159
gi|94987238|ref|YP_595171.1| predicted ATP-dependent protea... 566 e-159
gi|58584808|ref|YP_198381.1| ATP-dependent Lon protease [Wo... 565 e-159
>gi|34540426|ref|NP_904905.1| ATP-dependent protease La [Porphyromonas gingivalis W83]
gi|34396739|gb|AAQ65804.1| ATP-dependent protease La [Porphyromonas gingivalis W83]
Length = 810
Score = 1525 bits (3948), Expect = 0.0, Method: Composition-based stats.
Identities = 809/810 (99%), Positives = 810/810 (100%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE
Sbjct: 1 MKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL
Sbjct: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI
Sbjct: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI
Sbjct: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
Query: 241 QEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
QEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI
Sbjct: 241 QEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP
Sbjct: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP
Sbjct: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI
Sbjct: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR
Sbjct: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV
Sbjct: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE
Sbjct: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG
Sbjct: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVI 780
GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVI
Sbjct: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVI 780
Query: 781 DTTDIYSFGKKTEEEKTEKVEKTEKKQRKK 810
DTTDIYSFGKKTEEEKTEKVEKTEKKQRKK
Sbjct: 781 DTTDIYSFGKKTEEEKTEKVEKTEKKQRKK 810
>gi|154494855|ref|ZP_02033860.1| hypothetical protein PARMER_03899 [Parabacteroides merdae ATCC
43184]
gi|154085405|gb|EDN84450.1| hypothetical protein PARMER_03899 [Parabacteroides merdae ATCC
43184]
Length = 820
Score = 1085 bits (2807), Expect = 0.0, Method: Composition-based stats.
Identities = 536/772 (69%), Positives = 658/772 (85%), Gaps = 2/772 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
EE+PIL LRNM+LFPGVAMP+M+GR KS++LI+ K G V Q+DM+ E+P DL
Sbjct: 46 EELPILPLRNMVLFPGVAMPVMIGRPKSMRLIKEAAHKKSLIGVVCQKDMNTEDPKIEDL 105
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y GVVA+I+RVLEMPDGTTT I+QG++RF L+E++A +P++ G++KLL D++P K+ D
Sbjct: 106 YATGVVADIVRVLEMPDGTTTVILQGKKRFQLEELSAYDPYLIGKIKLLEDVMPDKS-DR 164
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
EFEALVSTI+D+++KM+ E PPR+LI S++ NKN +Y INF+ N+ + KQ+LL
Sbjct: 165 EFEALVSTIKDLTIKMLGAASE-PPRDLIFSIKNNKNILYLINFSCCNVPNGSSEKQDLL 223
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I +KDR YRLL++L++E Q++ELK SIQMKT E++++QQKEYFLQQQIKTIQEELGGN
Sbjct: 224 LIGNLKDRAYRLLFILNREYQLVELKTSIQMKTHEDINQQQKEYFLQQQIKTIQEELGGN 283
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
IND+E++ELR KAA KWS VAETFEKE+RKLERLHPQSPD+S+Q QYVQ I++LPW
Sbjct: 284 INDLEIRELREKAAKKKWSLAVAETFEKEVRKLERLHPQSPDFSIQTQYVQAIVNLPWNE 343
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
+SKDNFNL AQ VLDRDH+GLEKVKERIIEHLAVLK+KGDMKSPIICLYGPPGVGKTSL
Sbjct: 344 YSKDNFNLAHAQKVLDRDHYGLEKVKERIIEHLAVLKLKGDMKSPIICLYGPPGVGKTSL 403
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
GKS+AE+L RKYVR+SLGGLHDEAEIRGHRRTYIGAM GRIIQ+LQ+AGTSNPVF+LDEI
Sbjct: 404 GKSVAEALHRKYVRVSLGGLHDEAEIRGHRRTYIGAMSGRIIQNLQKAGTSNPVFILDEI 463
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ +D+KGDP+SALLEVLDPEQNNAFHDNYLDID+DLS V+FIATAN+L++IS+PLLDR
Sbjct: 464 DKVTNDFKGDPASALLEVLDPEQNNAFHDNYLDIDYDLSKVMFIATANNLNTISQPLLDR 523
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
MELI+VSGYI+EEKVEIAARHL+PKQL HG K +KF KKT++ +I+ YTRESGVR L
Sbjct: 524 MELIEVSGYIMEEKVEIAARHLVPKQLEIHGLSKGKVKFPKKTLQAIIESYTRESGVREL 583
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
+K+IA ++RK+ ++ A++ ++ P DL +LGA YTRD+YQGN AGVV GLAWT+
Sbjct: 584 DKKIAKIMRKLARKLASSEELPAQIRPEDLHDYLGAVEYTRDKYQGNNYAGVVTGLAWTA 643
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
VGGEILF+E+SL +G+ KLTLTGNLGDVMKESA++AL+YI +H+ GI + +F NW V
Sbjct: 644 VGGEILFVESSLSKGKGSKLTLTGNLGDVMKESAMLALEYIHSHAGLFGIDEGMFENWNV 703
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
H+HVPEGAIPKDGPSAGITMVTSLVSA T+RKVR+ +AMTGEITLRGKVLPVGGIKEKIL
Sbjct: 704 HIHVPEGAIPKDGPSAGITMVTSLVSAFTQRKVRSNLAMTGEITLRGKVLPVGGIKEKIL 763
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
AAKR+GI E+ILC+EN+KDIEEI YLKGL FHYV +I +V+ ALL+EKV
Sbjct: 764 AAKRAGIKELILCQENKKDIEEIKPDYLKGLAFHYVDDIRQVVDLALLKEKV 815
>gi|150008488|ref|YP_001303231.1| ATP-dependent protease [Parabacteroides distasonis ATCC 8503]
gi|149936912|gb|ABR43609.1| ATP-dependent protease [Parabacteroides distasonis ATCC 8503]
Length = 823
Score = 1069 bits (2765), Expect = 0.0, Method: Composition-based stats.
Identities = 526/772 (68%), Positives = 657/772 (85%), Gaps = 2/772 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+ +PIL LRNM+LFPGVA+P+++GR KS++LI+ K G V Q++M E+P DL
Sbjct: 49 DTIPILPLRNMVLFPGVALPVIIGRPKSMRLIKEAVHKKSLIGVVCQKEMGTEDPILEDL 108
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y GV+A+I+RVLEMPDG+TT I+QG++RF L E+T T+P++ G++ +L D P K D
Sbjct: 109 YTTGVIADIVRVLEMPDGSTTVILQGKKRFELNELTETDPYLSGKITVLEDTKPDKT-DR 167
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
EFEAL+STI+D+++KM+ + E PPR+LI S++ NKN +Y +NF+ +NI + A KQ+LL
Sbjct: 168 EFEALISTIKDLTIKMLGAVAE-PPRDLIFSIKNNKNVLYVVNFSCSNIPSGSAEKQQLL 226
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I +K+R YRLL++L++E Q++ELKASIQMKT E++++QQKEYFLQQQIKTIQEELGGN
Sbjct: 227 LIGDLKERAYRLLFILNREYQLVELKASIQMKTHEDINQQQKEYFLQQQIKTIQEELGGN 286
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
IN++E++ELR KA+ KW +EVA+ FEKELRKLERLHPQSPDYSVQ QYVQ I++LPW
Sbjct: 287 INELEIKELREKASRKKWPAEVAQVFEKELRKLERLHPQSPDYSVQTQYVQNIVNLPWNE 346
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
+SKDNFNL AQ VLDRDH+GLEKVKERIIEHLAVLK+KGDMKSPIICLYGPPGVGKTSL
Sbjct: 347 YSKDNFNLSHAQKVLDRDHYGLEKVKERIIEHLAVLKLKGDMKSPIICLYGPPGVGKTSL 406
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
G+SIAE+L RKYVR+SLGGLHDEAEIRGHRRTYIGAMCGRIIQ++Q+AGTSNPVF+LDEI
Sbjct: 407 GRSIAEALRRKYVRVSLGGLHDEAEIRGHRRTYIGAMCGRIIQNIQKAGTSNPVFILDEI 466
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DKI +D+KGDP+SALLEVLDPEQNNAFHDNYLDID+DLS V+FIATAN+L++IS+PLLDR
Sbjct: 467 DKITNDFKGDPASALLEVLDPEQNNAFHDNYLDIDYDLSKVMFIATANNLNTISQPLLDR 526
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
MELI+VSGYI+EEKVEIAA+HL+PKQ+ HG +K +KF KKT++ +++ YTRESGVR L
Sbjct: 527 MELIEVSGYIMEEKVEIAAKHLVPKQMDVHGLKKGSVKFPKKTLQVIVEAYTRESGVREL 586
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
+K+IA ++RK+ ++ A++ T ++P DL +LGA Y+RD+YQGN AGVV GLAWT+
Sbjct: 587 DKKIAKIMRKLARKVASDEPIPTSIKPEDLYEYLGAVEYSRDKYQGNDYAGVVTGLAWTA 646
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
VGGEILF+E+SL +G+ KLTLTGNLGDVMKESA++AL+YI AH+ + I++E+F NW V
Sbjct: 647 VGGEILFVESSLSKGKGSKLTLTGNLGDVMKESAMLALEYIHAHAAQFNINEELFENWNV 706
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
HVHVPEGAIPKDGPSAGITMVTSLVSA T+RKV+ +AMTGEITLRGKVLPVGGIKEKIL
Sbjct: 707 HVHVPEGAIPKDGPSAGITMVTSLVSAFTQRKVKKNLAMTGEITLRGKVLPVGGIKEKIL 766
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
AAKR+GI E+ILC+EN KDI EI YLKGL FHYVS+I +V+ ALL EKV
Sbjct: 767 AAKRAGIKELILCKENEKDINEIKPEYLKGLVFHYVSDIQQVVDLALLREKV 818
>gi|156862180|gb|EDO55611.1| hypothetical protein BACUNI_00643 [Bacteroides uniformis ATCC 8492]
Length = 826
Score = 977 bits (2526), Expect = 0.0, Method: Composition-based stats.
Identities = 492/781 (62%), Positives = 628/781 (80%), Gaps = 3/781 (0%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
++E +PIL LRNM+LFPGV MP+ VGR+ SLKL+R EKK Y V Q+ + E P
Sbjct: 36 VEEVLPILPLRNMVLFPGVFMPVSVGRKSSLKLVREAEKKNSYIAVVCQKVAETETPLFE 95
Query: 66 DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNK 125
DL+ +G VA+I+RVLEMPD TTT I+QG +R L+EIT T P++KGR+ L + LP KN
Sbjct: 96 DLHTIGTVAKIVRVLEMPDQTTTVILQGSKRMELKEITDTTPYLKGRIATLNEELPEKN- 154
Query: 126 DHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
D EF ALV +D++++ ++ + P++ +++ NPM+ ++F N+ K E
Sbjct: 155 DKEFHALVEACKDLTVRYIK-SSDMFPQDSAFAIKNITNPMFLVDFICTNLPLKKDEKIE 213
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
LL I ++ R YRLL +L++E+Q+ E+K SIQM+ RE++D+QQ+EYFLQQQIKTIQ+ELG
Sbjct: 214 LLRIDSLRARTYRLLEILNREVQLAEIKESIQMRAREDIDQQQREYFLQQQIKTIQDELG 273
Query: 246 GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
G + E++E+R KA T+KW+ EV TF KE+ KLER HPQSPDYSVQ+ Y+QT++SLPW
Sbjct: 274 GGGQEQEIEEMRKKAETIKWNDEVKATFLKEVDKLERTHPQSPDYSVQLNYLQTMLSLPW 333
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
G+++ DN +L A+ L++DH+GLEKVKERI+EHLAVLK+KGDMKSPIICLYGPPGVGKT
Sbjct: 334 GIYTTDNLSLVNAEKTLNKDHYGLEKVKERILEHLAVLKLKGDMKSPIICLYGPPGVGKT 393
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SLG+SIA +L RKY+R+SLGG+HDEAEIRGHR+TYIGAM GRII++L +AG+SNPVF+LD
Sbjct: 394 SLGRSIAAALKRKYIRMSLGGVHDEAEIRGHRKTYIGAMPGRIIKNLIKAGSSNPVFILD 453
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ +D +GDPSSALLEVLDPEQN FHDN+LD+D+DLS V+FIATAN+L++I PLL
Sbjct: 454 EIDKVSADRQGDPSSALLEVLDPEQNTTFHDNFLDVDYDLSKVMFIATANNLNTIPGPLL 513
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRMELI+VSGYI EEK+EIA RHL+PK+L +G +KNDIK K T+E +I++YTRESGVR
Sbjct: 514 DRMELIEVSGYITEEKIEIARRHLVPKELEANGMKKNDIKIPKNTLEAIIENYTRESGVR 573
Query: 546 TLEKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLA 604
LEK+I ++RK ++ AT+ T+++P DL FLGAP YTRD+YQGN AGVV GLA
Sbjct: 574 ELEKKIGKILRKSARQYATDGYFAKTEIKPGDLYEFLGAPEYTRDKYQGNEYAGVVTGLA 633
Query: 605 WTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNN 664
WT+VGGEILF+ETSL RG+ +LTLTGNLGDVMKESA++AL+YI+AH+ L + +EIF+N
Sbjct: 634 WTAVGGEILFVETSLSRGKGGRLTLTGNLGDVMKESAMLALEYIKAHASLLNLDEEIFDN 693
Query: 665 WQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKE 724
W +HVHVPEGAIPKDGPSAGITM TSL SALT++KV+A +AMTGEITLRGKVLPVGGIKE
Sbjct: 694 WNIHVHVPEGAIPKDGPSAGITMATSLASALTQKKVKANLAMTGEITLRGKVLPVGGIKE 753
Query: 725 KILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTD 784
KILAAKR+GI EIIL +ENRK+IEEI DIYLKGL FHYV +I EV AL +EKV D D
Sbjct: 754 KILAAKRAGIKEIILSDENRKNIEEIQDIYLKGLTFHYVKDIKEVFAIALTDEKVADAID 813
Query: 785 I 785
+
Sbjct: 814 L 814
>gi|153806354|ref|ZP_01959022.1| hypothetical protein BACCAC_00615 [Bacteroides caccae ATCC 43185]
gi|149131031|gb|EDM22237.1| hypothetical protein BACCAC_00615 [Bacteroides caccae ATCC 43185]
Length = 822
Score = 974 bits (2517), Expect = 0.0, Method: Composition-based stats.
Identities = 492/788 (62%), Positives = 637/788 (80%), Gaps = 4/788 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
E +P+L LRNM+LFPGV +PI VGR+ SLKLIR EKK V QR E+P DL
Sbjct: 38 EILPVLPLRNMVLFPGVFLPITVGRKSSLKLIRDAEKKHKDIAVVCQRSAHTEDPKLEDL 97
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
++VG V I+RVLEMPD TTT I+QG +R L++IT T P++KG ++LL + +P K+ D
Sbjct: 98 HNVGTVGRIVRVLEMPDQTTTVILQGMKRLILKDITETHPYLKGEIELLEEDVPSKD-DK 156
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
EF+ALV T +D++++ ++ + ++ +++ N M+ +NF +N+ K +LL
Sbjct: 157 EFQALVETCKDLTMRYIK-SSDVMHQDSAFAIKNINNSMFLVNFICSNLPFKKDEKMDLL 215
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I+ +++R Y LL +L++E+Q+ E+KASIQM+ RE++D+QQ+EYFLQQQIKTIQ+ELGG+
Sbjct: 216 SINSLRERTYHLLEILNREVQLAEIKASIQMRAREDIDQQQREYFLQQQIKTIQDELGGS 275
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
+ E++E+R KA M+W++EV ETF KEL KLER HPQSPDYSVQ+ Y+QT+++LPWGV
Sbjct: 276 GQEQEIEEMRQKAERMRWNAEVRETFLKELAKLERTHPQSPDYSVQLNYLQTMLNLPWGV 335
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
++ DN NLK A+ L++DH+GLEKVKERI+EHLAVLK+KGDMKSPIICLYGPPGVGKTSL
Sbjct: 336 YTTDNLNLKNAEKTLNKDHYGLEKVKERILEHLAVLKLKGDMKSPIICLYGPPGVGKTSL 395
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
GKSIA +L RKYVR+SLGG+HDEAEIRGHR+TYIGAM GRII+SL +AG SNPVF+LDEI
Sbjct: 396 GKSIASALKRKYVRMSLGGVHDEAEIRGHRKTYIGAMPGRIIKSLIKAGASNPVFILDEI 455
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ +D +GDPSSALLEVLDPEQN +FHDN+LD+D+DLS VLFIATAN+L++I PLLDR
Sbjct: 456 DKVSADRQGDPSSALLEVLDPEQNTSFHDNFLDVDYDLSKVLFIATANNLNTIPGPLLDR 515
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
MELI+VSGYI EEK+EIA +HL+PK+L +G +K+DIK K+T+E +I+ YTRESGVR L
Sbjct: 516 MELIEVSGYITEEKIEIARKHLLPKELEANGLKKSDIKLPKETLEAIIESYTRESGVREL 575
Query: 548 EKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
EK+I ++RK ++ AT+ T+++P+DL FLGAP YTRD+YQGN AGVV GLAWT
Sbjct: 576 EKKIGKILRKSARQYATDGYFAKTEIKPTDLYDFLGAPEYTRDKYQGNDYAGVVTGLAWT 635
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
+VGGEILF+ETSL RG+ +LTLTGNLGDVMKESA++AL+YI++H+ L ++++IF+NW
Sbjct: 636 AVGGEILFVETSLSRGKGGRLTLTGNLGDVMKESAMLALEYIKSHASLLQLNEDIFDNWN 695
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+HVPEGAIPKDGPSAGITM TSL SALT+RKV+A IAMTGEITLRGKVLPVGGIKEKI
Sbjct: 696 IHIHVPEGAIPKDGPSAGITMATSLASALTQRKVKANIAMTGEITLRGKVLPVGGIKEKI 755
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDIY 786
LAAKR+GI EII+ EN+K+I+EI DIYLKGL FHYV++I EV AL EKV D D+
Sbjct: 756 LAAKRAGIKEIIMSVENKKNIDEIQDIYLKGLTFHYVNDIKEVFAIALTNEKVADAIDL- 814
Query: 787 SFGKKTEE 794
S K ++E
Sbjct: 815 SVKKPSQE 822
>gi|156110323|gb|EDO12068.1| hypothetical protein BACOVA_02571 [Bacteroides ovatus ATCC 8483]
Length = 821
Score = 972 bits (2512), Expect = 0.0, Method: Composition-based stats.
Identities = 489/788 (62%), Positives = 631/788 (80%), Gaps = 4/788 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
E +P+L LRNM+LFPGV +PI VGR+ SLKL+R +KK V QR E+P DL
Sbjct: 37 EILPVLPLRNMVLFPGVFLPITVGRKSSLKLVRDADKKHKDIAVVCQRSAHTEDPKLEDL 96
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
+++G V I+R+LEMPD TTT I+QG +R +L I T P++KG ++LL + +PGK+ D
Sbjct: 97 HNIGTVGRIVRILEMPDQTTTVILQGMKRLSLTSIIETHPYLKGEIELLEEDVPGKD-DK 155
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
EF+ALV T +D++++ ++ + ++ +++ N M+ +NF +N+ K +LL
Sbjct: 156 EFQALVETCKDLTMRYIK-SSDVMHQDSSFAIKNINNSMFLVNFICSNLPFKKDEKMDLL 214
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I+ +++R Y LL +L++E+Q+ E+KASIQM+ RE++D+QQ+EYFLQQQIKTIQ+ELGG
Sbjct: 215 SINSLRERTYHLLEILNREVQLAEIKASIQMRAREDIDQQQREYFLQQQIKTIQDELGGG 274
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
+ E++E+R KA M+W+ EV +TF KEL KLER HPQSPDYSVQ+ Y+QT+++LPWG
Sbjct: 275 GQEQEIEEMRQKAERMRWNLEVRDTFMKELAKLERTHPQSPDYSVQLNYLQTMLNLPWGT 334
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
++ DN NLK A+ L++DH+GLEKVKERI+EHLAVLK+KGDMKSPIICLYGPPGVGKTSL
Sbjct: 335 YTTDNLNLKNAEKTLNKDHYGLEKVKERILEHLAVLKLKGDMKSPIICLYGPPGVGKTSL 394
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
GKSIA +L RKYVR+SLGG+HDEAEIRGHR+TYIGAM GRII+SL +AG SNPVF+LDEI
Sbjct: 395 GKSIASALKRKYVRMSLGGVHDEAEIRGHRKTYIGAMPGRIIKSLIKAGASNPVFILDEI 454
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ +D +GDPSSALLEVLDPEQN +FHDN+LD+D+DLS VLFIATAN+L++I PLLDR
Sbjct: 455 DKVSADRQGDPSSALLEVLDPEQNTSFHDNFLDVDYDLSKVLFIATANNLNTIPGPLLDR 514
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
MELI+VSGYI EEKVEIA +HL+PK+L +G +K DIK K T+E +I+ YTRESGVR L
Sbjct: 515 MELIEVSGYITEEKVEIARKHLLPKELEANGLKKTDIKLPKDTLEAIIESYTRESGVREL 574
Query: 548 EKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
EK+I ++RK ++ AT+ T+++P+DL FLGAP YTRD+YQGN AGVV GLAWT
Sbjct: 575 EKKIGKILRKSARQYATDGYFAKTEIKPTDLYDFLGAPEYTRDKYQGNDYAGVVTGLAWT 634
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
+VGGEILF+ETSL RG+ +LTLTGNLGDVMKESA++AL+YI+AH+ L +++EIF+NW
Sbjct: 635 AVGGEILFVETSLSRGKGGRLTLTGNLGDVMKESAMLALEYIKAHASVLSLNEEIFDNWN 694
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+HVPEGAIPKDGPSAGITM TSL SALT+RKV+A IAMTGEITLRGKVLPVGGIKEKI
Sbjct: 695 IHIHVPEGAIPKDGPSAGITMATSLASALTQRKVKANIAMTGEITLRGKVLPVGGIKEKI 754
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDIY 786
LAAKR+GI EII+ EN+K+I+EI DIYLKGL FHYV++I EV AL EKV D D+
Sbjct: 755 LAAKRAGIKEIIMSAENKKNIDEIQDIYLKGLTFHYVNDIKEVFAIALTNEKVADPIDL- 813
Query: 787 SFGKKTEE 794
S K ++E
Sbjct: 814 SVKKPSQE 821
>gi|53713593|ref|YP_099585.1| ATP-dependent protease [Bacteroides fragilis YCH46]
gi|60681873|ref|YP_212017.1| ATP-dependent protease [Bacteroides fragilis NCTC 9343]
gi|52216458|dbj|BAD49051.1| ATP-dependent protease [Bacteroides fragilis YCH46]
gi|60493307|emb|CAH08091.1| ATP-dependent protease [Bacteroides fragilis NCTC 9343]
Length = 822
Score = 970 bits (2508), Expect = 0.0, Method: Composition-based stats.
Identities = 489/788 (62%), Positives = 633/788 (80%), Gaps = 4/788 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
E +P+L LRNM+LFPGV MP+ VGR+ SL+L+R +KK Y V Q+ + +EP DL
Sbjct: 38 ETLPVLPLRNMVLFPGVFMPVSVGRKSSLRLVREADKKKSYIAVVCQKMAETDEPAFEDL 97
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
+ +G + +I+RVLEMPD TTT I+QG +R L+ IT T P++KG V ++ + +P K+ D
Sbjct: 98 HPIGTIGKIVRVLEMPDQTTTVIIQGMKRLELKNITETHPYLKGEVNIVEEEIPSKD-DK 156
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
EF+ALV T +D++++ ++ + +E +++ N M+ ++F N+ K ELL
Sbjct: 157 EFQALVETCKDLTIRYIK-SSDTLHQESAFAIKNLTNHMFLVDFICTNLPLKKDEKIELL 215
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I +++R YRLL +L++E+Q+ E+KASIQM+ RE++D+QQ+EYFLQQQIKTIQ+ELGG
Sbjct: 216 RIDSLRERTYRLLEILNREVQLAEIKASIQMRAREDIDQQQREYFLQQQIKTIQDELGGG 275
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
+ E++E+R KA MKWS+EV ETF KEL KLER HPQSPDYSVQ+ Y+QT+++LPWGV
Sbjct: 276 GQEQEIEEMRQKAEHMKWSTEVRETFLKELAKLERTHPQSPDYSVQLNYLQTMLNLPWGV 335
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
++ DN NLK A+ L++DH+GLEKVKERI+EHLAVLK+KGDMKSPIICLYGPPGVGKTSL
Sbjct: 336 YTTDNLNLKNAEKTLNKDHYGLEKVKERILEHLAVLKLKGDMKSPIICLYGPPGVGKTSL 395
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
GKSIA +L RKY+R+SLGG+HDEAEIRGHR+TYIGAM GRII++L +AG+SNPVF+LDEI
Sbjct: 396 GKSIAAALKRKYIRMSLGGVHDEAEIRGHRKTYIGAMPGRIIKNLIKAGSSNPVFILDEI 455
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ +D +GDPSSALLEVLDPEQN AFHDN+LD+D+DLS V+FIATAN+L++I PLLDR
Sbjct: 456 DKVSADRQGDPSSALLEVLDPEQNTAFHDNFLDVDYDLSKVMFIATANNLNTIPGPLLDR 515
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
MELI+VSGYI EEKVEIA +HL+PK+L +G +K DIK K T+E +I+ YTRESGVR L
Sbjct: 516 MELIEVSGYITEEKVEIARKHLVPKELEANGMKKTDIKIPKDTLEAIIESYTRESGVREL 575
Query: 548 EKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
EK+I ++RK ++ AT+ T+++P+DL FLGAP YTRD+YQGN AGVV GLAWT
Sbjct: 576 EKKIGKILRKSARQYATDGFFLKTEIKPTDLYDFLGAPEYTRDKYQGNDYAGVVTGLAWT 635
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
+VGGEILF+ETSL RG+ +LTLTGNLG+VMKESA++AL+YI+AH+ L + +EIF+NW
Sbjct: 636 AVGGEILFVETSLSRGKGGRLTLTGNLGEVMKESAMLALEYIKAHASLLNLDEEIFDNWN 695
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+HVHVPEGAIPKDGPSAGITM TSL SALT+RKV+A +AMTGEITLRGKVLPVGGIKEKI
Sbjct: 696 IHVHVPEGAIPKDGPSAGITMATSLASALTQRKVKANLAMTGEITLRGKVLPVGGIKEKI 755
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDIY 786
LAAKR+GI EII+ EN+K+I+EI DIYLKGL FHYV+++ EV AL +EKV D D+
Sbjct: 756 LAAKRAGIKEIIMSAENKKNIDEIQDIYLKGLTFHYVNDVKEVFAIALTQEKVADAIDL- 814
Query: 787 SFGKKTEE 794
S K +E
Sbjct: 815 SVKKANQE 822
>gi|150005673|ref|YP_001300417.1| ATP-dependent protease [Bacteroides vulgatus ATCC 8482]
gi|149934097|gb|ABR40795.1| ATP-dependent protease [Bacteroides vulgatus ATCC 8482]
Length = 825
Score = 923 bits (2386), Expect = 0.0, Method: Composition-based stats.
Identities = 474/793 (59%), Positives = 615/793 (77%), Gaps = 9/793 (1%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+E+P++ LRNM++FP V MP+ +GR +LKLI KK + V Q D+++P D+
Sbjct: 38 KEIPVMPLRNMVMFPSVVMPVTIGRPSTLKLINAAYKKKLPIAVVCQIQGDMDDPGFNDV 97
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGR-QRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
Y VGV+ +I+RV EMP G TT I+Q + L IT T P++KG V +P+ D
Sbjct: 98 YHVGVIGKILRVFEMPGGNTTVIMQSNGPKVHLDSITKTSPYLKGMVTPIPEANDQLETD 157
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
EF+AL+ T +D++ K +E + P + + +++ NP +NF AN + K +L
Sbjct: 158 -EFKALIDTCKDLTSKFIEASEKMSP-DTVFAIKNLDNPEILVNFICANFPIPVEEKIKL 215
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
L+ ++ R Y L+ +L++E+Q+ ++K SIQM+TRE++D+QQ+EYFLQQQIK IQ+ELG
Sbjct: 216 LKAGDLQSRLYMLVKILNREVQLADIKQSIQMRTREDIDRQQREYFLQQQIKNIQDELGA 275
Query: 247 NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
D E+ ELR K T KWS E+AE FEKE+ KLER + QSPD++VQ+ Y+QT++ LPW
Sbjct: 276 GQED-EIDELRQKGKTKKWSPEMAELFEKEVSKLERTNSQSPDFNVQLTYLQTLLGLPWN 334
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
VF+ DN N+ A+ L++DH+GLEKVKERI+EHLAVLK+KGDMKSPIICLYGPPGVGKTS
Sbjct: 335 VFTTDNLNISNAEKTLNKDHYGLEKVKERILEHLAVLKLKGDMKSPIICLYGPPGVGKTS 394
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+SIA SL RKYVR+SLGG+HDEAEIRGHR+TYIGAM GRII+SL +A +SNPV +LDE
Sbjct: 395 LGRSIAASLKRKYVRMSLGGVHDEAEIRGHRKTYIGAMPGRIIKSLIKAESSNPVIILDE 454
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD++GDPSSA+LEVLDPEQNN FHDNYLD+D+DLS V+FIATAN+LS+I LLD
Sbjct: 455 IDKLGSDHRGDPSSAMLEVLDPEQNNTFHDNYLDVDYDLSKVMFIATANNLSTIPPALLD 514
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RMELI+VSGYI EEKVEIA RHL+PK+L +G +K +KFSK +E ++++YTRESGVR
Sbjct: 515 RMELIEVSGYITEEKVEIARRHLVPKELEANGIKKEYVKFSKAALECIVENYTRESGVRE 574
Query: 547 LEKQIAAVIRKITKEAATN---VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGL 603
LEK+I V+RKI E A + V+H +++P+D+ +LG P Y+RD+YQGN AGVV GL
Sbjct: 575 LEKKINKVMRKIALEFARDGYEVMH--EIKPADVRKYLGTPEYSRDKYQGNEYAGVVTGL 632
Query: 604 AWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFN 663
AWT+VGGEILF+ETSL +G+ KLTLTGNLGDVMKESA++AL+Y++AH+ L + ++IF+
Sbjct: 633 AWTAVGGEILFVETSLSKGKGGKLTLTGNLGDVMKESAMLALEYLKAHTKLLNLQEDIFD 692
Query: 664 NWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIK 723
NW +H+HVPEGAIPKDGPSAGITMVTSL SALT+RKV+A +AMTGEITLRGKVLPVGGIK
Sbjct: 693 NWNIHIHVPEGAIPKDGPSAGITMVTSLASALTQRKVKANLAMTGEITLRGKVLPVGGIK 752
Query: 724 EKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTT 783
EKILAAKR+GI +IILCEENRK+IEEI +YL+GL FHYV++I EVL AL EKV D
Sbjct: 753 EKILAAKRAGIKDIILCEENRKNIEEIQPMYLEGLTFHYVTDIKEVLALALTNEKVNDAI 812
Query: 784 DIYSFGKKTEEEK 796
D +KTEE+K
Sbjct: 813 DFNITNQKTEEKK 825
>gi|149278727|ref|ZP_01884862.1| ATP-dependent protease La [Pedobacter sp. BAL39]
gi|149230346|gb|EDM35730.1| ATP-dependent protease La [Pedobacter sp. BAL39]
Length = 825
Score = 885 bits (2286), Expect = 0.0, Method: Composition-based stats.
Identities = 452/782 (57%), Positives = 605/782 (77%), Gaps = 9/782 (1%)
Query: 3 EDHMQEE-----MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDM 57
ED M E + IL LRN +LFPGV +PI VGR+KS+KLI+ K G VSQRD+
Sbjct: 31 EDDMNNEATPEVLAILPLRNTVLFPGVVIPITVGRDKSIKLIKEAYKGDKIIGVVSQRDV 90
Query: 58 DVEEPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLP 117
+E+P L +VG VA II++L+MPDG TT I+QG+QRF L E +EP++K +
Sbjct: 91 SIEDPTFEQLNNVGTVAHIIKMLQMPDGNTTVIIQGKQRFRLVEEVQSEPYIKVTISKFE 150
Query: 118 DILPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANIS 177
+ D EF+ALVS+I++MS ++++L P E ++++ ++ + INF S+N++
Sbjct: 151 ET--KYKTDKEFKALVSSIKEMSSQIIQLS-PNIPSEAGIALKNIESTSFLINFISSNMN 207
Query: 178 TSIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQI 237
++ KQ++LE++ +++R ++ LL ELQ++ELK IQ K R ++DKQQ++YFL QQ+
Sbjct: 208 ADVSDKQKMLEMANLRERAMMVMELLTLELQMLELKNQIQSKVRTDLDKQQRDYFLNQQL 267
Query: 238 KTIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYV 297
KTIQEELGGN +D+E + L+ +A KWS++V+E F KEL KL R++P +PDYSVQ+ Y+
Sbjct: 268 KTIQEELGGNSSDLEYETLQQRAFKKKWSAQVSEHFNKELEKLGRMNPAAPDYSVQINYL 327
Query: 298 QTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLY 357
+ ++ LPW F+KDNF+LKRAQ VLD+DHFGLEKVK+RIIE+LAVLK+K DMK+PIICL
Sbjct: 328 ELLLDLPWNDFTKDNFDLKRAQRVLDKDHFGLEKVKQRIIEYLAVLKLKRDMKAPIICLV 387
Query: 358 GPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGT 417
GPPGVGKTSLGKSIA++L RKYVR++LGG+ DEAEIRGHR+TYIGAM GRIIQS+++AG
Sbjct: 388 GPPGVGKTSLGKSIAKALNRKYVRMALGGIRDEAEIRGHRKTYIGAMPGRIIQSIKKAGA 447
Query: 418 SNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSL 477
+NPVFVLDEIDK+ +D++GDPSSALLEVLDPEQN+AF+D+Y++ D+DLS+VLFIATANSL
Sbjct: 448 ANPVFVLDEIDKVGADFRGDPSSALLEVLDPEQNSAFNDHYVEADYDLSNVLFIATANSL 507
Query: 478 SSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDD 537
++I LLDRME+I+V+GY IEEK+EIA ++L+PKQ +HG + DI IEK+I+D
Sbjct: 508 ANIQPALLDRMEIIEVNGYTIEEKIEIAKKYLLPKQKEQHGIKTKDISLKNALIEKVIED 567
Query: 538 YTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDA 597
YTRESGVR+LEK+I +++R + + A + + D+ LGAP Y +D Y+GN A
Sbjct: 568 YTRESGVRSLEKKIGSLVRGVATKIAMEETYEPNLNNEDVERILGAPLYDKDLYEGNEVA 627
Query: 598 GVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGI 657
GVV GLAWT VGG+ILFIE SL G+ KLTLTGNLG+VMKESAVIAL Y+R+H+D GI
Sbjct: 628 GVVTGLAWTQVGGDILFIEASLSPGKG-KLTLTGNLGEVMKESAVIALAYLRSHADTFGI 686
Query: 658 SQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVL 717
++F+NW +HVHVP GA PKDGPSAGITM+T+L SA T+RKV++ +AMTGEITLRGKVL
Sbjct: 687 DYDLFDNWDIHVHVPAGATPKDGPSAGITMLTALTSAFTQRKVKSNLAMTGEITLRGKVL 746
Query: 718 PVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
PVGGIKEKILAAKR+ I +IILC+ N+KDI +I + Y+K L+FHYVS + EV++ AL +
Sbjct: 747 PVGGIKEKILAAKRANIKDIILCKSNKKDILDIKESYIKDLRFHYVSEMREVIELALTAD 806
Query: 778 KV 779
KV
Sbjct: 807 KV 808
>gi|89890783|ref|ZP_01202292.1| class III heat shock DNA-binding ATP dependent Lon protease
[Flavobacteria bacterium BBFL7]
gi|89516928|gb|EAS19586.1| class III heat shock DNA-binding ATP dependent Lon protease
[Flavobacteria bacterium BBFL7]
Length = 818
Score = 867 bits (2240), Expect = 0.0, Method: Composition-based stats.
Identities = 445/782 (56%), Positives = 601/782 (76%), Gaps = 8/782 (1%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ + + EE+PIL LRNM+LFPGV +PI GR++S+KL++ G V+Q+D +E
Sbjct: 35 MNNESVPEELPILPLRNMVLFPGVVIPITAGRDRSIKLLQEANAANKVIGVVAQKDESIE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
EP DL+ GVVA I+R+L+MPDG TT I+QG++RF + EI +P++ + +P+
Sbjct: 95 EPGANDLHKTGVVARILRILKMPDGNTTVIIQGKKRFQMGEILTEQPYITAKTTDIPEAR 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANIST 178
P + + EF A++ +I+++SL E++ + P P E +++ ++ + +NF S+N++
Sbjct: 155 PLPD-NTEFNAIIDSIKELSL---EIIKQSPNIPSEASFAIKNIESNSFLVNFVSSNMNL 210
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
++ KQ+LLE++ +KDR L ++ E Q +ELK IQ K +++KQQ+EYFL QQ+K
Sbjct: 211 KVSEKQQLLEMNDLKDRALETLRYMNIEQQKLELKNDIQSKVHSDINKQQREYFLHQQMK 270
Query: 239 TIQEELGGNIND-IEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYV 297
TIQ+ELGG ++ E+ E+R +A + KW +V E FEKEL K++R++PQ +YS+Q Y+
Sbjct: 271 TIQDELGGGVSSHQELDEMRKRAKSKKWDDKVKEHFEKELAKMQRMNPQVAEYSIQRNYL 330
Query: 298 QTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLY 357
+ LPW VFSKDNF+LKRA+ +LDRDH+GL++VK+RIIE+LAVLK++ DMKSPI+CLY
Sbjct: 331 DLFLDLPWNVFSKDNFDLKRAKKILDRDHYGLDEVKKRIIEYLAVLKLRNDMKSPILCLY 390
Query: 358 GPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGT 417
GPPGVGKTSLGKS+AE+LGR+YVRISLGGL DEAEIRGHR+TYIGAM GRIIQS+++A T
Sbjct: 391 GPPGVGKTSLGKSMAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSIKKAKT 450
Query: 418 SNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSL 477
SNPVFVLDEIDK+ S + GDPSSA+LEVLDPEQNNAF+DN+L++ FDLS V+F+AT NSL
Sbjct: 451 SNPVFVLDEIDKLSSSHNGDPSSAMLEVLDPEQNNAFYDNFLEMGFDLSKVMFVATCNSL 510
Query: 478 SSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDD 537
++I L DRME+I+V+GY IEEKVEI +HL+PKQL EHG K +K +K IEK+++
Sbjct: 511 NTIQPALRDRMEIINVTGYTIEEKVEIGKQHLLPKQLKEHGLTKEHLKIAKPQIEKIVEG 570
Query: 538 YTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDA 597
YTRESGVR+L+KQ+A ++R K A + KV +V LGAPR RD+Y+ N A
Sbjct: 571 YTRESGVRSLDKQMAKMVRYAAKSIAMEEPYDLKVTNETVVEVLGAPRMERDKYENNDVA 630
Query: 598 GVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGI 657
GVV GLAWT VGG+ILFIE+ L +G+ LT+TGNLG VMKESA IA++YI+A+++ELGI
Sbjct: 631 GVVTGLAWTRVGGDILFIESILSKGKG-SLTITGNLGKVMKESATIAMEYIKANAEELGI 689
Query: 658 SQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVL 717
E+F+ + VH+HVPEGA PKDGPSAGITM+TSLVS T+RKV+ IAMTGEITLRGKVL
Sbjct: 690 PTEVFSKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVL 749
Query: 718 PVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
PVGGIKEKILAAKR+ I EI+LCE+NR+DIEEI YLKGL FHYVS++++VL+ AL ++
Sbjct: 750 PVGGIKEKILAAKRARIKEILLCEQNRRDIEEIKPEYLKGLTFHYVSDMSDVLELALTKQ 809
Query: 778 KV 779
KV
Sbjct: 810 KV 811
>gi|83857101|ref|ZP_00950629.1| ATP-dependent protease [Croceibacter atlanticus HTCC2559]
gi|83848468|gb|EAP86337.1| ATP-dependent protease [Croceibacter atlanticus HTCC2559]
Length = 816
Score = 864 bits (2233), Expect = 0.0, Method: Composition-based stats.
Identities = 444/779 (56%), Positives = 595/779 (76%), Gaps = 3/779 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ ++ + E +PIL LRN +LFPGV +PI GR+KS+KLI+ G VSQ+ +VE
Sbjct: 35 INKEKLPETLPILPLRNTVLFPGVVIPITAGRDKSIKLIQDANNGSKVVGVVSQKSEEVE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P D+ +GVVA I+RVL+MPDG TT I+QG++RF + E+ +P+++ +K +P+
Sbjct: 95 NPTGKDINTLGVVARILRVLKMPDGNTTVIIQGKKRFEIDEVITEDPYLQATIKEVPEAR 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
P K ++ EF A+V +I++++LK+++ P E ++ ++P + INF S+N++ S+
Sbjct: 155 PEK-ENEEFSAIVDSIKELALKIIK-QSPNIPSEASFAISNIESPSFLINFVSSNMNLSV 212
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
A KQ+LL + +K+R L ++ E Q +ELK IQ K + +M +QQ+EYFL QQ+KTI
Sbjct: 213 ADKQKLLATNDLKERALATLKFMNVEQQKLELKNDIQSKVQSDMSQQQREYFLHQQMKTI 272
Query: 241 QEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
QEELGG ++ EV+E++ +A W +VA+ F+KE+ KL+R++PQ +YS+Q Y+
Sbjct: 273 QEELGGVSHEDEVEEMKQRAKKKSWGEDVAKHFKKEISKLQRMNPQVSEYSIQRNYLDLF 332
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+ LPW FSKD F+LKRA +LDRDH+GLE VK+RIIE+LAVLK++ DMKSPI+CLYGPP
Sbjct: 333 LDLPWNEFSKDKFDLKRAMKILDRDHYGLEDVKKRIIEYLAVLKLRNDMKSPILCLYGPP 392
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKS+AE+LGR+YVRISLGGL DEAEIRGHR+TYIGAM GRIIQSL++AGTSNP
Sbjct: 393 GVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTSNP 452
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VFVLDEIDKI + +GDPSSALLEVLDPEQNN FHDN+L++ FDLS V+FIAT NSL++I
Sbjct: 453 VFVLDEIDKIGTGNQGDPSSALLEVLDPEQNNEFHDNFLEMGFDLSKVMFIATCNSLNTI 512
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
L DRME+I+V+GY IEEKVEI +HL+PKQL EHG K+ +K +K +EK+++ YTR
Sbjct: 513 QPALRDRMEIINVTGYTIEEKVEIGKKHLLPKQLEEHGLTKDHLKIAKPQLEKIVEGYTR 572
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
ESGVR+LEKQIA ++R K A ++ K+ D+V LG+P+ RD+Y+ N AGVV
Sbjct: 573 ESGVRSLEKQIAKMVRYAAKNIAMEEDYSVKITNDDVVEVLGSPKLERDKYENNDVAGVV 632
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGG+ILFIE+ L +G+ L +TGNLG VMKESA IA++YI+AH++E GI
Sbjct: 633 TGLAWTRVGGDILFIESILSKGKG-NLNITGNLGKVMKESATIAMEYIKAHAEEFGIIPT 691
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
IF + VH+HVPEGA PKDGPSAGITM+TSLVS T+RKV+ +AMTGEITLRGKVLPVG
Sbjct: 692 IFEKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSVAMTGEITLRGKVLPVG 751
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
GIKEKILAAKR+ I EI+LCE+NR+DI+EI + YLKGL FHYV+++++VL AL ++KV
Sbjct: 752 GIKEKILAAKRARIKEIVLCEDNRRDIKEIKEEYLKGLTFHYVTDMSQVLDVALTKQKV 810
>gi|149372804|ref|ZP_01891825.1| ATP-dependent protease La [unidentified eubacterium SCB49]
gi|149354501|gb|EDM43066.1| ATP-dependent protease La [unidentified eubacterium SCB49]
Length = 805
Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats.
Identities = 451/782 (57%), Positives = 593/782 (75%), Gaps = 8/782 (1%)
Query: 3 EDHMQEE-----MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDM 57
ED MQ E +PIL LRN +LFPGV +PI GR+ S+KLI G G VSQ++
Sbjct: 21 EDEMQREELPETLPILPLRNTVLFPGVVVPITAGRDASIKLINETNNGGKVIGVVSQKNE 80
Query: 58 DVEEPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLP 117
+VE P D+ VG VA I+RVL+MPDG TT I+QG++RF + EI TEP+M VK +
Sbjct: 81 EVENPGIDDINTVGTVARILRVLKMPDGNTTVIIQGKKRFEVSEIVTTEPYMTATVKEVA 140
Query: 118 DILPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANIS 177
+ P K K+ EF+A++ +I++++LK+++ P E +++ ++ + INF S+N++
Sbjct: 141 EARPEK-KNKEFDAIIESIKELALKIIK-SSPNLPSEASFAIKNIESDSFLINFVSSNLN 198
Query: 178 TSIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQI 237
S+ KQ +LEI+ +KDR + L ++ E Q + LK IQ K +E M++QQ+EYFL QQ+
Sbjct: 199 ISVENKQHILEINNLKDRALQALKYMNIEFQKLSLKNDIQSKVQEGMNQQQREYFLHQQM 258
Query: 238 KTIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYV 297
KTIQEELGGN + EV+E++ +A WS EV + F+KE+ KL+R++PQ ++S+Q Y+
Sbjct: 259 KTIQEELGGNGSHAEVEEMKARAKAKNWSEEVQKHFDKEIAKLQRMNPQVAEFSIQRNYL 318
Query: 298 QTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLY 357
I+ LPW FSKD F+LKRA+ +LDRDH+GL+ VK+RIIE+LAVLK++ DMKSPI+CLY
Sbjct: 319 DLILDLPWEKFSKDKFDLKRAKKILDRDHYGLDDVKKRIIEYLAVLKLRNDMKSPILCLY 378
Query: 358 GPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGT 417
GPPGVGKTSLGKS+AE+LGR+YVRISLGGL DEAEIRGHR+TYIGAM GRIIQSL++AGT
Sbjct: 379 GPPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGT 438
Query: 418 SNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSL 477
SNPVFVLDEIDK+ + +GDPSSA+LEVLDPEQN AF+DN+L++ +DLS V+FIAT+N L
Sbjct: 439 SNPVFVLDEIDKLSTGNQGDPSSAMLEVLDPEQNGAFYDNFLELGYDLSKVMFIATSNRL 498
Query: 478 SSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDD 537
+I L DRME+I+VSGY IEEKVEIA +HL+PKQL EHG K + +K +EK+++
Sbjct: 499 DTIQPALRDRMEIINVSGYTIEEKVEIAKQHLLPKQLEEHGLTKKHLTIAKPQLEKIVEG 558
Query: 538 YTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDA 597
YTRESGVR LEKQIA ++R A + KV +V LG+P+ R++Y+ N A
Sbjct: 559 YTRESGVRGLEKQIAKMVRYAAMNIAMEEKYDIKVSNDVIVEVLGSPKLERNKYENNDTA 618
Query: 598 GVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGI 657
GVV GLAWT VGG+ILFIE+ L +G+ LT+TGNLG VMKESA IAL+YI+A++++LG+
Sbjct: 619 GVVTGLAWTRVGGDILFIESILSKGKG-TLTMTGNLGKVMKESATIALEYIKANAEKLGV 677
Query: 658 SQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVL 717
+ E+F+ + VH+HVP GA PKDGPSAGITM+TSLVS T+RKV+ IAMTGEITLRGKVL
Sbjct: 678 NPEVFSKYNVHLHVPAGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVL 737
Query: 718 PVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
PVGGIKEKILAAKR+ I EI+LCEENR DIEEIN YLKGL FHYV ++++VL AL +E
Sbjct: 738 PVGGIKEKILAAKRARIKEILLCEENRSDIEEINPDYLKGLTFHYVKDMSDVLTLALTKE 797
Query: 778 KV 779
KV
Sbjct: 798 KV 799
>gi|88712268|ref|ZP_01106355.1| ATP-dependent protease [Flavobacteriales bacterium HTCC2170]
gi|88709674|gb|EAR01907.1| ATP-dependent protease [Flavobacteriales bacterium HTCC2170]
Length = 816
Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats.
Identities = 446/776 (57%), Positives = 584/776 (75%), Gaps = 7/776 (0%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
+ E +PIL LRN +LFPGV +PI GR+KS+KLI+ G V+Q+D E P
Sbjct: 40 LPETLPILPLRNTVLFPGVVIPITAGRDKSIKLIKDANNGSKVIGVVAQKDEKTENPGVN 99
Query: 66 DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNK 125
D++ +G VA I+RVL+MPDG TT I+QG++RF + E+ +P+M V+ + P K+
Sbjct: 100 DIHTLGTVARILRVLQMPDGNTTVIIQGKKRFEVAEVLTEKPYMTATVRETLEERPEKD- 158
Query: 126 DHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANISTSIAVK 183
EF A++ +I+D+SLK++ + P P E +++ ++ + INF S+N++ + K
Sbjct: 159 GQEFLAIIESIKDLSLKIIR---DNPNIPSEASFAIKNIQSNSFLINFVSSNLNLDVKEK 215
Query: 184 QELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEE 243
QELLEI +++R L ++ ELQ +ELK IQ K R +MD+QQ+EYFL QQ+KTIQEE
Sbjct: 216 QELLEIGNLQERALTTLKYMNVELQKLELKNDIQSKVRSDMDQQQREYFLHQQMKTIQEE 275
Query: 244 LGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISL 303
LGG D E+ E+R KA KW +++ E FEKEL K++R++PQ +YS+Q Y+ I L
Sbjct: 276 LGGVSYDEEIAEMRVKAKDKKWDTKIGEHFEKELAKMQRMNPQVAEYSIQRNYLDLFIDL 335
Query: 304 PWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVG 363
PW FSKD F+LKRAQ +LDRDH+GLE VK RIIE+LAVLK++ DMKSPI+CL+GPPG G
Sbjct: 336 PWNEFSKDKFDLKRAQKILDRDHYGLEDVKRRIIEYLAVLKLRNDMKSPILCLFGPPGTG 395
Query: 364 KTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFV 423
KTSLGKS+AE+LGR+YVR+SLGGL DEAEIRGHR+TYIGAM GRI+QSL++AGTSNPVF+
Sbjct: 396 KTSLGKSVAEALGREYVRMSLGGLRDEAEIRGHRKTYIGAMPGRIVQSLKKAGTSNPVFI 455
Query: 424 LDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRP 483
LDEIDK+ S ++GDPSSA+LEVLDPEQN+ F+DN+L++ +DLS V+FIATANSL++I
Sbjct: 456 LDEIDKLASSHQGDPSSAMLEVLDPEQNSEFYDNFLEMGYDLSKVMFIATANSLATIQPA 515
Query: 484 LLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESG 543
L DRME+I+VSGY IEEKVEIA RHL+PKQL EHG D+K K+ +EK+++ YTRESG
Sbjct: 516 LRDRMEIINVSGYTIEEKVEIAKRHLLPKQLKEHGLGTKDLKIGKRQLEKIVEGYTRESG 575
Query: 544 VRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGL 603
VR+LEKQIA V+R K A + K+ D+ LG R RD+Y+ N AGVV GL
Sbjct: 576 VRSLEKQIAKVVRYAAKSIAIEEEYNIKISNEDVEKILGPARMERDKYENNDVAGVVTGL 635
Query: 604 AWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFN 663
AWT VGG+ILFIE+ L +G+ L +TGNLG VMKESA IA++YI++++D GI IF+
Sbjct: 636 AWTRVGGDILFIESILSKGKG-ALNITGNLGKVMKESATIAMEYIKSNADSFGIDPAIFD 694
Query: 664 NWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIK 723
+ VH+HVPEGA PKDGPSAGITM+TSLVS T+RKV+ +AMTGEITLRGKVLPVGGIK
Sbjct: 695 KYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSLAMTGEITLRGKVLPVGGIK 754
Query: 724 EKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
EKILAAKR+ I EIILCEENRKDI EI + YLKGL F+YVS+++EV+ A+ ++KV
Sbjct: 755 EKILAAKRAKIKEIILCEENRKDILEIKEDYLKGLTFNYVSDMSEVIDLAITKQKV 810
>gi|86131913|ref|ZP_01050510.1| ATP-dependent protease [Cellulophaga sp. MED134]
gi|85817735|gb|EAQ38909.1| ATP-dependent protease [Dokdonia donghaensis MED134]
Length = 816
Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats.
Identities = 440/781 (56%), Positives = 592/781 (75%), Gaps = 7/781 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ + + E + IL LRN +LFPGV +PI GR+ S+KLI K G G V+Q+D VE
Sbjct: 35 INNEELPESLAILPLRNTVLFPGVVIPISAGRDTSIKLIDEANKGGKVVGVVAQKDESVE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P D+ VGVVA I+RVL+MPDG T I+QG++RF + E+T TEP+++ +K P+
Sbjct: 95 NPTADDINKVGVVARILRVLKMPDGNVTVIIQGKKRFEINEVTQTEPYLRATIKEFPETR 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANIST 178
P K EF+A + +I+D++LK+++ + P P E +++ ++ + INF S+N++
Sbjct: 155 PDKGS-QEFKAAIDSIKDLALKIIQ---DSPNIPSEASFAIKNIQSDSFLINFVSSNMNL 210
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
++A KQELL I+ + R L + E Q +ELK IQ K + +M +QQ+EYFL QQ+K
Sbjct: 211 TVAEKQELLHINDLHKRAIETLKFMDMERQKLELKNDIQNKVQNDMSQQQREYFLHQQMK 270
Query: 239 TIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQ 298
TIQEELGG+ ++ +++E+R +A T KW +V + F+KEL K++R++PQ +YS+Q Y+
Sbjct: 271 TIQEELGGSTSEDDLEEMRERAKTKKWGEKVEKHFKKELSKMQRMNPQVAEYSIQRNYLD 330
Query: 299 TIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYG 358
+ LPW FS+D F+LKRA +LDRDH+GL+ VK RIIE+LAVLK++ DMKSPI+CLYG
Sbjct: 331 LFLDLPWNEFSEDKFDLKRAMKILDRDHYGLDDVKRRIIEYLAVLKLRNDMKSPILCLYG 390
Query: 359 PPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTS 418
PPGVGKTSLGKS+AE+LGR+Y+R+SLGG+ DE+EIRGHR+TYIGAM GRIIQSL++AGTS
Sbjct: 391 PPGVGKTSLGKSVAEALGREYIRMSLGGMRDESEIRGHRKTYIGAMPGRIIQSLRKAGTS 450
Query: 419 NPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
NPVFVLDEIDK+ +GDPSSALLEVLDPEQN+ FHDN+L++ FDLS V+FIAT+NSL+
Sbjct: 451 NPVFVLDEIDKLSMGSQGDPSSALLEVLDPEQNSEFHDNFLEMGFDLSKVMFIATSNSLN 510
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
+I L DRME+I+V+GY IEEK EIA RHL+PKQL EHG +K +K +EK+++ Y
Sbjct: 511 TIQPALRDRMEIINVTGYTIEEKTEIAKRHLLPKQLKEHGMTPEQLKIAKPQLEKIVEGY 570
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAG 598
TRESGVR LEKQ+A ++R K A + KV D++ LG+PR RD+Y+ N AG
Sbjct: 571 TRESGVRGLEKQVAKMVRYGAKNLAMEEEYNVKVSNEDIIEVLGSPRMERDKYENNDVAG 630
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
VV GLAWT VGG+ILFIE++L +G+ L++TGNLG VMKESA IA++YI+A+++ LG+
Sbjct: 631 VVTGLAWTRVGGDILFIESALSKGKG-TLSITGNLGKVMKESATIAMEYIKANAELLGLD 689
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
+IF+++ VH+HVPEGA PKDGPSAGITM+TSLVS T+RKV+ IAMTGEITLRGKVLP
Sbjct: 690 SKIFDSYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVLP 749
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
VGGIKEKILAAKR+ I EI+LCE+NR+DIEEI YLKGL FHYV +++EVL+ AL ++K
Sbjct: 750 VGGIKEKILAAKRAKIKEILLCEQNRRDIEEIKPDYLKGLTFHYVKDMSEVLELALTKQK 809
Query: 779 V 779
V
Sbjct: 810 V 810
>gi|120436204|ref|YP_861890.1| ATP-dependent protease La [Gramella forsetii KT0803]
gi|117578354|emb|CAL66823.1| ATP-dependent protease La [Gramella forsetii KT0803]
Length = 816
Score = 856 bits (2212), Expect = 0.0, Method: Composition-based stats.
Identities = 441/779 (56%), Positives = 586/779 (75%), Gaps = 3/779 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ +++ E +PIL LRN +LFPGV +PI GR+ S+KLI G VSQ+D +VE
Sbjct: 35 INRENLPETLPILPLRNTVLFPGVVIPITAGRDASIKLINEANNGSKTIGVVSQKDEEVE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P D+ VGVVA I+RVL+MPDG TT I+QG++RF + E+ +P+M + +PD
Sbjct: 95 NPTSKDINKVGVVARILRVLKMPDGNTTVIIQGKKRFQITEVVTEQPYMNATITEVPDNR 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
P K+ + EF A++ +I+D++L++++ P E +++ ++ + INF S+N++ S+
Sbjct: 155 PEKD-NAEFSAIIDSIKDLALQIIK-GSPNIPSEASFAIKNIESNSFLINFVSSNMNLSV 212
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
KQ+LLE++ +K+R L ++ E Q +ELK IQ K + +M +QQ+EYFL QQ+KTI
Sbjct: 213 EEKQKLLEMNDLKERALATLKHMNTENQKLELKNDIQSKVQSDMSQQQREYFLHQQMKTI 272
Query: 241 QEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
QEELGG ++ E+ E+R +A +W +V FEKEL K++R++PQ +YS+Q Y+
Sbjct: 273 QEELGGVSHEGEIVEMRDRAKDKQWDEDVKNHFEKELSKMQRMNPQVAEYSIQRNYLDLF 332
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+ LPW FSKD F+LKRA+ +LDRDH+GL+ VK RIIE+LAVLK++ DMKSPI+CLYGPP
Sbjct: 333 LDLPWNEFSKDKFDLKRAKKILDRDHYGLDDVKRRIIEYLAVLKLRNDMKSPILCLYGPP 392
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKS+AE+LGR+YVRISLGGL DEAEIRGHR+TYIGAM GRIIQSL++AGTSNP
Sbjct: 393 GVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTSNP 452
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VFVLDEIDK+ GDPSSALLEVLDPEQN+ FHDN+L++ FDLS V+FIAT NSLS+I
Sbjct: 453 VFVLDEIDKLAVGNSGDPSSALLEVLDPEQNSEFHDNFLEMGFDLSKVMFIATCNSLSTI 512
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
L DRME+I+V+GY IEEKVEIA RHL+PKQL EHG + +K KK +EK+++ YTR
Sbjct: 513 QPALRDRMEIINVTGYTIEEKVEIAKRHLLPKQLEEHGLNSDHLKIGKKQLEKVVEGYTR 572
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
ESGVR LEKQIA V+R K A + KV D++ LG+P+ RD+Y+ N AGVV
Sbjct: 573 ESGVRALEKQIAKVVRYAAKNIAMEEEYNIKVSGEDIIEILGSPKLERDKYENNDVAGVV 632
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGG+ILFIE+ L +G+ L++TGNLG VMKESA IA++YI+A+++ LGI+
Sbjct: 633 TGLAWTQVGGDILFIESILSKGKG-NLSITGNLGKVMKESATIAMEYIKANAERLGITPS 691
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
IF+ + VH+HVPEGA PKDGPSAGITM+TSLVS T++K++ IAMTGEITLRGKVLPVG
Sbjct: 692 IFDQYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQKKIKKSIAMTGEITLRGKVLPVG 751
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
GIKEKILAAKR+ I EIILCE+N++DIEEI + Y+KGL FHYV +++V+ AL + V
Sbjct: 752 GIKEKILAAKRARIKEIILCEDNKRDIEEIKEEYVKGLTFHYVKEMSDVIDIALTNQNV 810
>gi|91214809|ref|ZP_01251782.1| ATP-dependent protease [Psychroflexus torquis ATCC 700755]
gi|91187236|gb|EAS73606.1| ATP-dependent protease [Psychroflexus torquis ATCC 700755]
Length = 815
Score = 854 bits (2206), Expect = 0.0, Method: Composition-based stats.
Identities = 440/783 (56%), Positives = 593/783 (75%), Gaps = 8/783 (1%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ + + +++PIL L+N +LFPGV +PI GR+KS+KLI G V+Q + D E
Sbjct: 35 INREDLPDDLPILPLKNTVLFPGVVIPITAGRDKSIKLINDANNGNKTIGVVAQTNDDEE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P A ++ VGVVA I+RVL+MPDG TT I+QG++RF + E+ + +P++K +V+ ++
Sbjct: 95 HPSYAGIHKVGVVARILRVLKMPDGNTTVIIQGKKRFKITELVSDQPYLKCKVEEFEELK 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANIST 178
P ++ D+EFE ++ +++D+SL++++ + P P E +++ ++ + INF S+N++
Sbjct: 155 P-ESDDNEFETIIDSVKDLSLRIIK---DSPNIPSEASFAIKNIESSSFLINFVSSNMNV 210
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
+ KQ+LLE S +K+R L ++ E Q +ELK IQ K + +M +QQ+EYFL QQ+K
Sbjct: 211 DVEDKQKLLETSDLKERALSTLKYMNLEFQKLELKNDIQSKVQNDMSQQQREYFLHQQMK 270
Query: 239 TIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQ 298
TIQEELGG ++ EV ++R +A +W V F KEL KL++++PQ +YS+Q Y+
Sbjct: 271 TIQEELGGVSSEGEVDDMRERAKAKEWKETVETHFNKELGKLQKMNPQVAEYSIQRNYLD 330
Query: 299 TIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYG 358
+ LPW +S D F+LKRAQ VLDRDH+GLE VK RIIE+LAVLK++ DMKSPI+CLYG
Sbjct: 331 LFLDLPWDHYSDDIFDLKRAQKVLDRDHYGLEDVKRRIIEYLAVLKLRKDMKSPILCLYG 390
Query: 359 PPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTS 418
PPGVGKTSLGKSIAE+LGRKY R+SLGGL DEAE+RGHR+TYIGAM GRIIQSL++AGT
Sbjct: 391 PPGVGKTSLGKSIAEALGRKYARVSLGGLRDEAEVRGHRKTYIGAMPGRIIQSLKKAGTG 450
Query: 419 NPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
NPVFVLDEIDKI + ++GDPSSALLEVLDPEQNN FHDN+L++ +DLS V+F+ATAN+L+
Sbjct: 451 NPVFVLDEIDKIGNSHQGDPSSALLEVLDPEQNNDFHDNFLEVGYDLSKVMFVATANNLA 510
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
+I L DRME+I+VSGY +EEK+EIA RHL+PKQ+ EHG +K DIK K+ +EK+I+ Y
Sbjct: 511 TIHPALRDRMEIINVSGYTVEEKIEIAKRHLVPKQISEHGIKKEDIKLGKQQLEKIIEGY 570
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAG 598
TRESGVR LEKQ+A VIR I K A + KV + LG P R+ Y+ N AG
Sbjct: 571 TRESGVRNLEKQVAKVIRNIAKNIAMEEDYDVKVSDGAVEKILG-PSRPRNSYENNDVAG 629
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
VV GLAWTSVGGEILFIE+ L +G+ L++TGNLG VMKESA IA++YI++++++ ++
Sbjct: 630 VVTGLAWTSVGGEILFIESILSKGKG-NLSITGNLGKVMKESATIAMEYIKSNAEKFDLN 688
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
+IF N+ VH+HVPEGA PKDGPSAG+TM+TSLVS T+RK++ +AMTGEITLRGK+LP
Sbjct: 689 TDIFTNYNVHIHVPEGATPKDGPSAGVTMLTSLVSLFTQRKIKKNLAMTGEITLRGKILP 748
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
VGGIKEKILAAKR+ I EIILCE+NRKDIEEI + YLKGLK +YVS ++EVL ALL++K
Sbjct: 749 VGGIKEKILAAKRAKIKEIILCEDNRKDIEEIKEDYLKGLKINYVSEMHEVLDLALLKQK 808
Query: 779 VID 781
V D
Sbjct: 809 VKD 811
>gi|88802631|ref|ZP_01118158.1| ATP-dependent protease [Polaribacter irgensii 23-P]
gi|88781489|gb|EAR12667.1| ATP-dependent protease [Polaribacter irgensii 23-P]
Length = 817
Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats.
Identities = 448/774 (57%), Positives = 589/774 (76%), Gaps = 12/774 (1%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+PIL LRN +LFPGV +PI GR+ S++LI+ K G V+QR+ D EEP D++
Sbjct: 45 LPILPLRNTVLFPGVVIPITAGRDASIQLIKDANKGDKVIGVVAQRNEDEEEPTLKDIHT 104
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD--H 127
GVVA+I+RVL+MPDG TT I+QG++RF ++ I +P++K V+ + + K D
Sbjct: 105 TGVVAQILRVLKMPDGNTTVIIQGKKRFEIETIIQDKPYLKATVR---EAIEDKEIDDEK 161
Query: 128 EFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
EFEA++ +I++ +L E++ E P P E +++ K+ + +NF S+N+ S+A KQ
Sbjct: 162 EFEAIIESIKEQAL---EVIKENPMLPSEASFAIKNIKSDSFLVNFISSNMDLSVAQKQV 218
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
+LE +K+R L L+KELQ ++L+ IQ KTRE++D+QQ+EY+L QQ+KTIQEELG
Sbjct: 219 ILEKDNLKERALLALKNLNKELQKLQLRNDIQSKTREDLDQQQREYYLHQQLKTIQEELG 278
Query: 246 GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
G ND E++++RT+A + KWS EV FEKEL +L+R++PQ+ +Y VQ Y++ ++ LPW
Sbjct: 279 GVSNDEELEDMRTQAKSKKWSKEVGTIFEKELNRLKRMNPQAAEYGVQRSYLELMLELPW 338
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
GV+S+D FNLK A VLDRDHFGLE+VK+RIIEHLAVLK++GDMKSPIICLYGPPGVGKT
Sbjct: 339 GVYSEDKFNLKHATKVLDRDHFGLEEVKDRIIEHLAVLKLRGDMKSPIICLYGPPGVGKT 398
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SLGKS+AE+LGRKYVR+SLGGL DEAEIRGHR+TYIGAM GR+IQ+L+++GTSNPVFVLD
Sbjct: 399 SLGKSVAEALGRKYVRMSLGGLRDEAEIRGHRKTYIGAMPGRLIQNLKKSGTSNPVFVLD 458
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ +GDPSSA+LEVLDPEQN +F+DNYL++ +DLS VLFIATAN+L I L
Sbjct: 459 EIDKLGQSNQGDPSSAMLEVLDPEQNESFYDNYLEVGYDLSKVLFIATANNLGQIPWALR 518
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I+VSGY IEEK EI RHL+PKQL EHG +K +K +E++++ YTRESGVR
Sbjct: 519 DRMEIINVSGYTIEEKTEIGKRHLLPKQLKEHGLTAKHLKLGRKQLEQIVEGYTRESGVR 578
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LEK+IA V+R K A + + + LG PR+ RD+++ N AGVV GLAW
Sbjct: 579 GLEKKIAKVVRFAAKSIALEEDYDIALTSEKVEAILGTPRF-RDKFESNEVAGVVTGLAW 637
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG+ILFIE+ L +G+ L++TGNLG VMKESA IAL YI+A++DE GI E+ +
Sbjct: 638 TQVGGDILFIESILSKGK-GALSITGNLGTVMKESATIALQYIKANADEFGIEPEVLEKY 696
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
VH+HVPEGA PKDGPSAGITM+TSLVS+ T+RK++ +AMTGEITLRGKVLPVGGIKEK
Sbjct: 697 NVHIHVPEGATPKDGPSAGITMLTSLVSSFTQRKIKNKLAMTGEITLRGKVLPVGGIKEK 756
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
ILAAKR+ I EIILCE+NRKDI EI + YLKGL FHYVS++ +V+ AL ++KV
Sbjct: 757 ILAAKRANIKEIILCEDNRKDILEIKESYLKGLTFHYVSDMKQVIALALTKQKV 810
>gi|88805207|ref|ZP_01120726.1| ATP-dependent protease [Robiginitalea biformata HTCC2501]
gi|88784025|gb|EAR15195.1| ATP-dependent protease [Robiginitalea biformata HTCC2501]
Length = 822
Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats.
Identities = 439/778 (56%), Positives = 585/778 (75%), Gaps = 7/778 (0%)
Query: 4 DHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPD 63
+ + E +PIL LRN +LFPGV +PI GR+ S+ LIR + G V+Q+D +VE P
Sbjct: 44 EELPETLPILPLRNTVLFPGVVIPITAGRDTSINLIRDANQGSKVIGVVAQKDEEVENPG 103
Query: 64 RADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGK 123
AD++ +G VA I+RVL+MPDG TT I+QG++RF + E+ +P++ V+ + P
Sbjct: 104 IADIHTLGTVARILRVLQMPDGNTTVIIQGKKRFRVAEVLTEKPYLTATVRETREKRPAP 163
Query: 124 NKDHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANISTSIA 181
+ D EF ++ +I++++L+++ + P P E +++ ++ + INF S+N++ +
Sbjct: 164 D-DVEFSTIIDSIKELALQIIR---DNPNIPSEASFAIKNIQSDSFLINFVSSNLNLEVR 219
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
KQELLEIS ++ R L L+ E Q +EL+ +Q K R +MD+QQ+EYFL QQ+KTIQ
Sbjct: 220 EKQELLEISDLQQRALATLKHLNTEFQKLELRNELQSKVRSDMDQQQREYFLHQQMKTIQ 279
Query: 242 EELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
EELGG D E++E+ +A KWS V E F KEL KL+R++PQ +YS+Q Y+ ++
Sbjct: 280 EELGGLSYDEEIEEMEARAKKKKWSDAVGEHFGKELAKLQRMNPQVAEYSIQRNYLDLLL 339
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
LPWG +SKD F+LKRA+ +LDRDH+GLE VK RI+E+LAVLK++ DMKSPI+CLYGPPG
Sbjct: 340 DLPWGEYSKDRFDLKRAEKILDRDHYGLEDVKRRIVEYLAVLKLRNDMKSPILCLYGPPG 399
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLGKS+AE+LGR+YVR+SLGGL DEAEIRGHR+TYIGAM GRIIQ+L++AGTSNPV
Sbjct: 400 VGKTSLGKSVAEALGREYVRMSLGGLRDEAEIRGHRKTYIGAMPGRIIQNLKKAGTSNPV 459
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
F+LDEIDK+ S +GDPSSA+LEVLDPEQN+ F+DN+L++ +DLS V+FIATAN+L +I
Sbjct: 460 FILDEIDKLSSSAQGDPSSAMLEVLDPEQNSEFYDNFLEMGYDLSKVMFIATANNLGTIQ 519
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
L DRME+I+V+GY IEEKVEIA RHL+PKQL EHG D+K KK +EK+++ YTRE
Sbjct: 520 PALRDRMEIINVTGYTIEEKVEIAKRHLLPKQLKEHGLASKDLKIGKKQLEKIVEGYTRE 579
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
SGVR LEKQIA ++R + AT+ +T KV + + LGAPR RD+Y+ N AGVV
Sbjct: 580 SGVRGLEKQIAKMVRYAARHIATDEDYTVKVTNAVVEEVLGAPRMERDKYENNEVAGVVT 639
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLAWTSVGG+ILFIE+ L RG+ L +TGNLG VMKESA IAL++I+++++ GI E+
Sbjct: 640 GLAWTSVGGDILFIESILSRGKG-ALNITGNLGKVMKESATIALEFIKSNAEAFGIDPEV 698
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F + VH+HVPEGA PKDGPSAGI M+TSLVS ++RKV+ IAMTGEITLRGKVLPVGG
Sbjct: 699 FGRYNVHIHVPEGATPKDGPSAGIAMLTSLVSLFSQRKVKKSIAMTGEITLRGKVLPVGG 758
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
IKEKILAAKR+ I E+ILCEENR+DI EI + YLKGL FHYV+ + EV++ A+ KV
Sbjct: 759 IKEKILAAKRARIKEVILCEENRRDIAEIKEDYLKGLTFHYVTEMREVIEIAVTNRKV 816
>gi|126663821|ref|ZP_01734816.1| ATP-dependent protease La [Flavobacteria bacterium BAL38]
gi|126624085|gb|EAZ94778.1| ATP-dependent protease La [Flavobacteria bacterium BAL38]
Length = 820
Score = 850 bits (2196), Expect = 0.0, Method: Composition-based stats.
Identities = 433/781 (55%), Positives = 591/781 (75%), Gaps = 7/781 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ + + +++ IL LRN +LFPGV +PI GR+KS+KLI KG G V+Q D + E
Sbjct: 35 MNNEALPKDIAILPLRNTVLFPGVVIPITAGRDKSIKLINDANAKGKIIGVVAQIDENEE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
+P D++ +G VA I+RVL+MPDG TT I+QG++RF ++ T EP++K +K + +
Sbjct: 95 DPTPNDVHHIGTVARIMRVLKMPDGNTTVILQGKKRFEVEAFTQEEPYLKATIKEVSEER 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANIST 178
P +K+ EF+ +V I+++++++++ E P P E +++ ++ + INF S+N++
Sbjct: 155 P-DDKNVEFKTIVDAIKELAIQIIK---ESPNIPTEATFAIKNIESNPFLINFVSSNMNL 210
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
S+ KQ+LL I +KDR L ++ ELQ +E++ IQ K R ++D+QQ+EYFLQQQ+K
Sbjct: 211 SVDEKQKLLSIPNLKDRALETLRFMNLELQKLEVRNDIQSKVRFDLDQQQREYFLQQQMK 270
Query: 239 TIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQ 298
TIQEELGG + E++E+R K KW A+ FEKEL KL+R +P SPD+ +Q Y++
Sbjct: 271 TIQEELGGVSYEAEIEEMRAKGLKKKWDDNTAKHFEKELSKLQRTNPNSPDFGIQRNYIE 330
Query: 299 TIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYG 358
+ LPW F+KDNF+LKRAQ +LDRDH+GLE+VK+RIIEHLAVLK++ DMKSPI+CLYG
Sbjct: 331 LFLELPWNEFTKDNFDLKRAQKILDRDHYGLEEVKKRIIEHLAVLKLRNDMKSPILCLYG 390
Query: 359 PPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTS 418
PPGVGKTS+GKS+AE+LGR+Y+R+SLGGL DEAEIRGHR+TYIGAM GRI+Q++++A TS
Sbjct: 391 PPGVGKTSIGKSVAEALGREYIRMSLGGLRDEAEIRGHRKTYIGAMPGRILQNIKKAKTS 450
Query: 419 NPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
NPVFVLDEIDK+ S + GDPSSALLEVLDPEQN FHDN+L++ +DLS V+FIAT+NSLS
Sbjct: 451 NPVFVLDEIDKLSSSHNGDPSSALLEVLDPEQNKEFHDNFLELGYDLSKVMFIATSNSLS 510
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
I L DRME+I+++GY IEEK+EIA HL+PKQL EHG D++ KK +EK++ Y
Sbjct: 511 PIQPALRDRMEIIEMTGYTIEEKIEIAKTHLLPKQLKEHGLTAKDLQIGKKQLEKIVVGY 570
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAG 598
TRESGVR LEK+IA V+R K A + KV +D++ L +PR RD+Y+ N AG
Sbjct: 571 TRESGVRGLEKKIAQVVRHAAKSIAMEEPYNVKVSDADILEVLKSPRMERDKYENNDVAG 630
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
VV GLAWTSVGG+ILFIE+ + +G+ +T+TGNLG VMKES IAL+YIRA+++ LGI
Sbjct: 631 VVTGLAWTSVGGDILFIESLISKGKG-SMTMTGNLGIVMKESVTIALEYIRANAENLGIE 689
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
E+ NN+ +H+HVPEGA PKDGPSAGI M+TS+VS+ T+++++ IAMTGEITLRGKVLP
Sbjct: 690 PEVLNNYNIHIHVPEGATPKDGPSAGIAMLTSMVSSFTQKRIKKNIAMTGEITLRGKVLP 749
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
VGGIKEKILAAKR+ I EIILC+EN++DIEEI Y++GL FHYV ++EVL A+ ++K
Sbjct: 750 VGGIKEKILAAKRANIKEIILCKENKRDIEEIKPDYIEGLTFHYVDKMSEVLAIAITDQK 809
Query: 779 V 779
V
Sbjct: 810 V 810
>gi|146300504|ref|YP_001195095.1| ATP-dependent protease La [Flavobacterium johnsoniae UW101]
gi|146154922|gb|ABQ05776.1| ATP-dependent protease La [Flavobacterium johnsoniae UW101]
Length = 817
Score = 850 bits (2195), Expect = 0.0, Method: Composition-based stats.
Identities = 439/772 (56%), Positives = 584/772 (75%), Gaps = 7/772 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+PIL LRN +LFPGV +PI GR+KS+KLI G G VSQ + + E+P + D++
Sbjct: 44 LPILPLRNTVLFPGVVIPISAGRDKSIKLINDANAGGKIIGVVSQINEEDEDPSKDDIHK 103
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G VA I+RVL+MPDG T I+QG++RF + E+ + EP+M +K + + P +N D EF
Sbjct: 104 IGTVARILRVLKMPDGNVTVILQGKKRFEIDEVVSEEPYMTASIKEVSEERPDEN-DSEF 162
Query: 130 EALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
A++ +++++++++++ E P P E +++ ++ + INF S+N++ S+ KQ LL
Sbjct: 163 TAILDSVKELAIQIIK---ESPNIPSEATFAIKNIESQSFLINFVSSNMNLSVKEKQGLL 219
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I+ +K+R L ++ ELQ +ELK IQ K R ++D+QQ+EYFL QQ+KTIQEELGG
Sbjct: 220 SINGLKERALETLRYMNVELQKLELKNDIQSKVRFDLDQQQREYFLHQQMKTIQEELGGV 279
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
+ E+ E+ KA T KW + + FEKEL K+ R++PQSPD+ +Q Y++ + LPWG
Sbjct: 280 SQEEEMDEMGQKAKTKKWDEKTQKHFEKELSKMRRMNPQSPDFGIQRNYLELFLELPWGE 339
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
+SKD F+LK AQ VLD+DHFGL++VK+R+IEHLAVLK++ DMKSPIICL GPPGVGKTS+
Sbjct: 340 YSKDKFDLKHAQKVLDKDHFGLDEVKKRMIEHLAVLKLRNDMKSPIICLTGPPGVGKTSI 399
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
G+S+AE+LGR+YVRISLGGL DEAEIRGHR+TYIGAM GRIIQSL++AGTSNPVF+LDEI
Sbjct: 400 GRSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTSNPVFILDEI 459
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ S GDPSSALLEVLDPEQNNAF+DN+L++ +DLS V+FIAT+N++++I L DR
Sbjct: 460 DKLSSGNSGDPSSALLEVLDPEQNNAFYDNFLEMGYDLSKVMFIATSNNMAAIQPALRDR 519
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
ME+I +SGY IEEKVEIA RHL PKQL HG D+ KK +EK+++ YTRESGVR L
Sbjct: 520 MEVIKMSGYTIEEKVEIAKRHLFPKQLEAHGLTSKDLTIGKKQLEKIVEGYTRESGVRNL 579
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
E +IA VIR K A + KV D+V LG PR RD+Y+ N AGVV GLAWTS
Sbjct: 580 ETKIAQVIRNAAKAVAMEEEYNKKVTDEDIVKVLGVPRLERDKYENNDVAGVVTGLAWTS 639
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
VGG+ILFIE+ + G+ LT+TGNLG+VMKESA IAL+YI+A++ +LG++ E+F + +
Sbjct: 640 VGGDILFIESLISEGKG-ALTITGNLGNVMKESATIALEYIKANAKKLGLAIELFQKYNI 698
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
H+HVPEGA PKDGPSAGI M+TSLVS LT++KV+ +AMTGEITLRGKVLPVGGIKEKIL
Sbjct: 699 HLHVPEGATPKDGPSAGIAMLTSLVSLLTQKKVKKSLAMTGEITLRGKVLPVGGIKEKIL 758
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
AAKR+GI EIILC EN+ DI+EI + YL+GL FHYV ++EVL AL ++ V
Sbjct: 759 AAKRAGIKEIILCHENKSDIDEIKEEYLEGLTFHYVKEMSEVLAIALTDQNV 810
>gi|86133865|ref|ZP_01052447.1| ATP-dependent protease [Tenacibaculum sp. MED152]
gi|85820728|gb|EAQ41875.1| ATP-dependent protease [Polaribacter dokdonensis MED152]
Length = 817
Score = 847 bits (2188), Expect = 0.0, Method: Composition-based stats.
Identities = 455/781 (58%), Positives = 595/781 (76%), Gaps = 8/781 (1%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ ++ + E +PIL LRN +LFPGV +PI GR+KS++LI+ K G V+QR+ + E
Sbjct: 36 INKESVPEVLPILPLRNTVLFPGVVIPITAGRDKSIQLIKEANKGDKIIGVVAQRNEEEE 95
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P D++ GVVA+I+RVL+MPDG TT I+QG++RF + E+ TEP++K VK +
Sbjct: 96 VPTLKDIHTTGVVAQILRVLKMPDGNTTVIIQGKKRFEIDELVQTEPYLKATVKEALEDR 155
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANIST 178
++K EF+A++ +I++ +L E++ E P P E +++ K+ + +NF ++N+
Sbjct: 156 EIEDKK-EFDAIIDSIKEQAL---EVIKENPMLPSEASFAIKNIKSNSFLVNFIASNMDL 211
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
S+ KQ +LE +K+R L L+KELQ ++L+ IQ KTRE++D+QQ+EY+L QQ+K
Sbjct: 212 SVMQKQVILEKDNLKERALLTLKNLNKELQKLQLRNDIQSKTREDLDQQQREYYLNQQLK 271
Query: 239 TIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQ 298
TIQEELGG ND E++E+R +A KWS EVA+TF+KE+ +L+R++PQ+ +Y VQ Y++
Sbjct: 272 TIQEELGGVSNDQELEEMRKQAKKKKWSKEVAQTFDKEIARLKRMNPQAAEYGVQRSYLE 331
Query: 299 TIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYG 358
++ LPWGVFS+D F+LK A VLDRDHFGLEKVKERIIE+LAVLK++ DMKSPIICLYG
Sbjct: 332 LMLELPWGVFSEDKFDLKHATKVLDRDHFGLEKVKERIIEYLAVLKLRNDMKSPIICLYG 391
Query: 359 PPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTS 418
PPGVGKTSLGKS+AESLGRKYVR+SLGGL DEAEIRGHR+TYIGAM GR+IQ+L++AGTS
Sbjct: 392 PPGVGKTSLGKSVAESLGRKYVRMSLGGLRDEAEIRGHRKTYIGAMPGRLIQNLKKAGTS 451
Query: 419 NPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
NPVFVLDEIDK+ ++GDPSSA+LEVLDPEQN AF+DNYL++ +DLS VLFIATAN+L
Sbjct: 452 NPVFVLDEIDKLGQSHQGDPSSAMLEVLDPEQNTAFYDNYLEVGYDLSKVLFIATANNLG 511
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
I L DRME+I+V+GY IEEKVEIA RHL+PKQL EHG D+K KK IE++++ Y
Sbjct: 512 QIPWALRDRMEIINVTGYTIEEKVEIAKRHLLPKQLKEHGLTTKDLKLGKKQIEQIVEGY 571
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAG 598
TRESGVR LEKQ+A V+R K A + + + LG PR R +Y+ N AG
Sbjct: 572 TRESGVRGLEKQVAKVVRFAAKSIALEEEYDVNLSTEKVEEILGTPR-NRGKYENNDVAG 630
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
VV GLAWTSVGG+ILFIE+ L +G+ L++TGNLG VMKESA IAL YI+++++E GI
Sbjct: 631 VVTGLAWTSVGGDILFIESILSKGKG-TLSITGNLGTVMKESATIALQYIKSNAEEFGIK 689
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
EI + VH+HVPEGA PKDGPSAGITM+TSLVS T+RKV+ +AMTGEITLRGKVLP
Sbjct: 690 PEIIEKYNVHIHVPEGATPKDGPSAGITMLTSLVSTYTQRKVKNKLAMTGEITLRGKVLP 749
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
VGGIKEKILAAKR+ I EIILCE+NRKDI EI + YLKGL FHYV+ + +VL AL ++K
Sbjct: 750 VGGIKEKILAAKRANIKEIILCEDNRKDILEIKESYLKGLTFHYVTEMKQVLDIALTKQK 809
Query: 779 V 779
V
Sbjct: 810 V 810
>gi|150025762|ref|YP_001296588.1| S16 family, ATP-dependent endopeptidase La [Flavobacterium
psychrophilum JIP02/86]
gi|149772303|emb|CAL43781.1| S16 family, ATP-dependent endopeptidase La [Flavobacterium
psychrophilum JIP02/86]
Length = 816
Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats.
Identities = 426/776 (54%), Positives = 582/776 (75%), Gaps = 7/776 (0%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
+ ++ IL LRN +LFPGV +PI GR+KS++LI G VSQ++ + E+P
Sbjct: 40 LPSDLLILPLRNTVLFPGVVIPITAGRDKSIRLIDAANAGDKIIGVVSQKNEEDEDPTEN 99
Query: 66 DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNK 125
D+ VG VA+I+RVL+MPDG T I+QG++RF ++++T+TEP+MK +K + + P K K
Sbjct: 100 DINKVGTVAKILRVLKMPDGNVTVILQGKKRFEIEQVTSTEPYMKASIKEVTEERPTK-K 158
Query: 126 DHEFEALVSTIQDMSLKMMELMVERP--PRELILSMRRNKNPMYQINFASANISTSIAVK 183
D EF A++ +++D+++ +++ E P P E +++ + + +NF S+N++ S+ K
Sbjct: 159 DKEFSAIIESVRDLAI---QIITESPNIPTEATFAIKNIDSSSFLVNFVSSNMNLSVVEK 215
Query: 184 QELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEE 243
Q+LLEI+ +K+R L ++ E Q +ELK IQ K R ++D+QQ+EYFL QQ+KTIQEE
Sbjct: 216 QDLLEINNLKERALATLKYMNIEFQKLELKNDIQSKVRFDLDQQQREYFLHQQMKTIQEE 275
Query: 244 LGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISL 303
LGG + E++E+R K+ T W + + F+KEL K++R +P SPD+ +Q Y++ + L
Sbjct: 276 LGGVSQEEEIEEMRAKSKTKIWDEKTQKHFDKELSKMQRSNPNSPDFGIQRNYLELFLDL 335
Query: 304 PWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVG 363
PWG +SKDNF+LKRAQ +LD+DHFGLE VK+R+IEHLAVLK++ DMKSPI+CL GPPGVG
Sbjct: 336 PWGKYSKDNFDLKRAQKILDKDHFGLEDVKKRMIEHLAVLKLRNDMKSPILCLTGPPGVG 395
Query: 364 KTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFV 423
KTS+G+SIAE+LGR+YVR+SLGGL DEAEIRGHR+TYIGA+ GRI+QSL++AGTSNPVFV
Sbjct: 396 KTSIGRSIAEALGREYVRVSLGGLRDEAEIRGHRKTYIGALPGRILQSLKKAGTSNPVFV 455
Query: 424 LDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRP 483
LDEIDK+ + +GDPSSALLEVLDPEQN+ F+DN+L+I +DLS V+FIAT+N++++I
Sbjct: 456 LDEIDKLSNSNQGDPSSALLEVLDPEQNSEFYDNFLEIGYDLSKVMFIATSNNMATIQPA 515
Query: 484 LLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESG 543
L DRME+I +SGY IEEKVEIA +HL+PKQL HG ++ KK +EK+++ YTRESG
Sbjct: 516 LKDRMEIIKMSGYTIEEKVEIAKQHLLPKQLAIHGLTSKHLQIGKKQLEKIVEGYTRESG 575
Query: 544 VRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGL 603
VR LE ++A VIR K A + + KV D+V LG PR RD+ + N AGVV GL
Sbjct: 576 VRGLENKMAQVIRNAAKCVAMDEEYNIKVSDDDIVKILGVPRLERDKSENNEVAGVVTGL 635
Query: 604 AWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFN 663
AWTSVGG+ILFIE+ + G+ +T+TGNLG VMKESA IAL+YI+A++ LG++ E+
Sbjct: 636 AWTSVGGDILFIESLISPGKG-TMTITGNLGTVMKESATIALEYIKANAQLLGLNSEMLA 694
Query: 664 NWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIK 723
+ +H+HVPEGA PKDGPSAGI M+TSLVS T++K++ +AMTGEITLRGKVLPVGGIK
Sbjct: 695 KYNIHLHVPEGATPKDGPSAGIAMLTSLVSVFTQKKIKKSLAMTGEITLRGKVLPVGGIK 754
Query: 724 EKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
EKILAAKR+ I EIILC EN+ DI+EI YL GL FHYV +NEVL A+ ++ V
Sbjct: 755 EKILAAKRANIKEIILCHENKSDIDEIKPEYLTGLTFHYVKEMNEVLAIAITKDNV 810
>gi|86142695|ref|ZP_01061134.1| ATP-dependent protease [Flavobacterium sp. MED217]
gi|85830727|gb|EAQ49185.1| ATP-dependent protease [Leeuwenhoekiella blandensis MED217]
Length = 816
Score = 831 bits (2146), Expect = 0.0, Method: Composition-based stats.
Identities = 426/779 (54%), Positives = 582/779 (74%), Gaps = 3/779 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ + + E +PIL LRN +LFPGV +PI GR+ S+ LI K G VSQ+D +VE
Sbjct: 35 INREELPETLPILPLRNTVLFPGVVIPITAGRDMSIDLINEANKGSKIIGVVSQKDGEVE 94
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P D+ GVVA I+RVL+MPDG T I+QG++RF + E+ +P++ V+ + +
Sbjct: 95 NPSADDINTTGVVARILRVLKMPDGNVTVIIQGKKRFNIAEVITEKPYLVATVREVSETR 154
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
P K+ EF+A++ +I++ +L++++ P E +++ ++ + INF S+N++ ++
Sbjct: 155 PEKDS-AEFKAIIDSIKEQALQIIK-QSPNIPSEAGFAIKNIESESFLINFVSSNMNLTV 212
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
KQ LLEI+ +++R + L ++ E+Q +ELK IQ + +M +QQ+EYFL QQ+KTI
Sbjct: 213 EEKQGLLEINDLQERALQTLRYMNTEMQKLELKNDIQSRVHNDMSQQQREYFLHQQMKTI 272
Query: 241 QEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
QEELGG + E++E+R +A KW +V + F+KEL K++R++PQ +YS+Q Y+
Sbjct: 273 QEELGGVSQEDEIEEMRERAKKKKWDEKVGKQFKKELAKMQRMNPQVAEYSIQRNYLDLF 332
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+ LPW FSKD F+LKRA+ +LDRDH+GL+ VK+RIIE+LAVLK++ DMKSPI+CLYGPP
Sbjct: 333 LDLPWNKFSKDKFDLKRAKKILDRDHYGLDDVKKRIIEYLAVLKLRNDMKSPILCLYGPP 392
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKS+AE+LGR+YVR+SLGGL DEAEIRGHR+TYIGAM GRI+Q+L++AGTSNP
Sbjct: 393 GVGKTSLGKSVAEALGREYVRMSLGGLRDEAEIRGHRKTYIGAMPGRILQNLKKAGTSNP 452
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VFVLDEIDK+ + +GDPSSALLEVLDPEQN FHDN+L++ FDLS V+FIATAN+L I
Sbjct: 453 VFVLDEIDKLSNSNQGDPSSALLEVLDPEQNAEFHDNFLELGFDLSKVMFIATANNLGGI 512
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
L DRME+I+V+GY IEEKVEI RHL+PKQL EHG + +K +K +EK+++ YTR
Sbjct: 513 QPALRDRMEIINVTGYTIEEKVEIGKRHLLPKQLKEHGVTADQLKIAKPQLEKIVEGYTR 572
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
ESGVR LEKQIA ++R K A + KV+ +V LG+P+ R++Y+ N AGVV
Sbjct: 573 ESGVRGLEKQIAKMVRYAAKNIAMEEEYKVKVDNDTVVEVLGSPKLERNKYENNDVAGVV 632
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGG+ILFIE+ L +G+ L++TGNLG VMKESA +A++YI+++++ L +
Sbjct: 633 TGLAWTQVGGDILFIESILSKGKG-NLSVTGNLGKVMKESATLAMEYIKSNAERLELDPT 691
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
+F + VH+HVPEGA PKDGPSAGITM+TSLVS T+RKV+ IAMTGEITLRGKVLPVG
Sbjct: 692 VFEKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVLPVG 751
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
GIKEKILAAKR+ I EII+C EN +DI+EIN+ YLKGL FHYV++++EVL AL +KV
Sbjct: 752 GIKEKILAAKRAHIKEIIMCAENERDIKEINEDYLKGLTFHYVNDMSEVLDIALTNQKV 810
>gi|126646685|ref|ZP_01719195.1| ATP-dependent protease [Algoriphagus sp. PR1]
gi|126576733|gb|EAZ80981.1| ATP-dependent protease [Algoriphagus sp. PR1]
Length = 823
Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats.
Identities = 413/772 (53%), Positives = 582/772 (75%), Gaps = 4/772 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+E+PIL++RN +LFPGV +PI VGR++S++L++ +K G +Q + ++++P D+
Sbjct: 42 DELPILSVRNTVLFPGVVIPITVGRQRSIRLVKKAQKGNKLIGVCAQINPNIDDPAWDDI 101
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y VG +A+II+++ +PDG TT I+QG++RF + E +P+ +V L + P +K
Sbjct: 102 YQVGTLAKIIKMIVLPDGNTTIIIQGKKRFEINEQVTDDPYFIAKVNYLEENFPKSSK-- 159
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
+ AL ++++ + +++ L E PRE +++ N + +F S+NI+ ++ KQ LL
Sbjct: 160 KIRALEESLKEAATRILHLNPE-IPREAQVALDNIDNTSFLTHFLSSNINAAVESKQRLL 218
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
EI+ DR LL + K++Q++ELK+ IQ K ++D+QQ++YFL+QQ+K +Q ELG
Sbjct: 219 EINDGVDRATLLLEFMMKDIQMLELKSEIQKKVHTDIDQQQRDYFLRQQMKVLQTELGEE 278
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
+ EV++LR + KW EV + FEKEL K+ R++P + +Y + + Y +T++ LPW
Sbjct: 279 GPEKEVEDLRARGDLKKWPEEVKKHFEKELDKILRINPSAAEYPIALNYAETMVELPWNE 338
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
F++DNF+LK A+++LD+DHFGLEKVKERIIE+LAVLK+K D+K PI+CLYGPPGVGKTSL
Sbjct: 339 FTQDNFDLKNAKAILDKDHFGLEKVKERIIEYLAVLKLKNDLKGPILCLYGPPGVGKTSL 398
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
GKSIA +LGRKY+R+SLGGLHDEAEIRGHR+TY+GAM G+IIQ++++ SNPV+VLDEI
Sbjct: 399 GKSIAAALGRKYIRMSLGGLHDEAEIRGHRKTYVGAMPGKIIQNMKKVKISNPVYVLDEI 458
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ SD++GDPSSA LEVLDPEQN+ F DNYL++++DLS VLFIATANSL SI L DR
Sbjct: 459 DKLSSDFRGDPSSAFLEVLDPEQNSTFLDNYLEVEYDLSKVLFIATANSLDSIQPALRDR 518
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
ME+I+V+GY EEKVEIA RHL+PKQ EHG + DI F+K ++ K+I+DYTRESGVR+L
Sbjct: 519 MEIIEVTGYTQEEKVEIAKRHLVPKQRKEHGLKSKDISFNKASLVKIIEDYTRESGVRSL 578
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
E+ I VIR I K A ++ K+ P + LG+ + ++ Y+ N AGVV GLAWTS
Sbjct: 579 ERAIGKVIRNIAKSIAMEEEYSPKITPDAVRKILGSEIFDKETYEDNSVAGVVTGLAWTS 638
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
VGGEILFIE+SL RG+ KLTL+G LGDVMKESAV AL Y+++ ++ LGI IF+ + +
Sbjct: 639 VGGEILFIESSLSRGK-GKLTLSGQLGDVMKESAVTALSYLKSKAETLGIDHRIFDQYDL 697
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
H+HVP GA+PKDGPSAGITM+T++ S T+RK++A +AMTGEI+L GKV+PVGGIKEKIL
Sbjct: 698 HIHVPAGAVPKDGPSAGITMLTAMASVFTQRKIKAKVAMTGEISLIGKVMPVGGIKEKIL 757
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
AAKR+GI EIILC++N++DIEEI+ Y+ G+ FH+V ++EVL+ ALL+ KV
Sbjct: 758 AAKRAGIKEIILCKKNKRDIEEIDPQYVTGIDFHFVDRVDEVLEIALLKTKV 809
>gi|124004961|ref|ZP_01689804.1| ATP-dependent protease La [Microscilla marina ATCC 23134]
gi|123989639|gb|EAY29185.1| ATP-dependent protease La [Microscilla marina ATCC 23134]
Length = 799
Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats.
Identities = 410/783 (52%), Positives = 575/783 (73%), Gaps = 3/783 (0%)
Query: 3 EDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEP 62
ED + +++PIL ++N +LFPGV +P+ VGR+KS+KL++ G ++Q + D+E+P
Sbjct: 11 EDIIIDDLPILPVKNTVLFPGVVIPVTVGRQKSIKLVKKAYNSDKTIGVIAQDNPDIEDP 70
Query: 63 DRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPG 122
DLY VG +A I+++L +PDG TT I+QG++RF + T EPF+K R++ + + P
Sbjct: 71 TTDDLYQVGTIAHILKMLVLPDGNTTIILQGKKRFNVLNFTEDEPFIKARIETISESFPT 130
Query: 123 KNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAV 182
K+ D E AL+S++++ + K+++L E P+E +++ ++ + +F S+NI+
Sbjct: 131 KD-DRETTALISSLKEAASKILKLNPE-IPQEAQIALDNIESASFLTHFLSSNINADTLE 188
Query: 183 KQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQE 242
KQ LLE + R LL +HK++Q++ELK IQ K ++D+QQ++YFL+QQ+K +Q+
Sbjct: 189 KQRLLETNDGLKRATMLLEFMHKDIQLLELKREIQSKVHSDIDQQQRDYFLRQQMKVLQD 248
Query: 243 ELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
ELG D E+ L+ +A KW +EVA+ FEKE+ K+ R++P S +Y + + Y + ++
Sbjct: 249 ELGSETGDQELDGLKMRAKKKKWPAEVAKQFEKEIVKISRMNPASAEYPIAVNYAELLVD 308
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
LPW ++D+ +L +AQ +LD DH GLEKVKERIIE+LAVLK+K +M+ PI+C YGPPGV
Sbjct: 309 LPWNDITRDSLDLSKAQKILDSDHHGLEKVKERIIEYLAVLKLKNNMRGPILCFYGPPGV 368
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSLGKSIA+SL RKY+R++LGGLHDEAEIRGHR+TYIGAM G+IIQ++++AG+SNPV
Sbjct: 369 GKTSLGKSIAKSLNRKYIRMALGGLHDEAEIRGHRKTYIGAMPGKIIQNIKKAGSSNPVI 428
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
+LDEIDK+ SD++GDP+SALLEVLDPEQNN F DNYL++ +DLS VLFIATANSL +I
Sbjct: 429 ILDEIDKVSSDFRGDPASALLEVLDPEQNNTFSDNYLELAYDLSKVLFIATANSLDTIHP 488
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRES 542
L DRME+I+++GY EEKV+IA +HLIPKQ EHG ++KF I K+I++YTRES
Sbjct: 489 ALRDRMEIIEITGYTEEEKVQIAKKHLIPKQRKEHGLSAKEVKFQPLAINKIIENYTRES 548
Query: 543 GVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
GVR LE+QI VIRK+ K A ++ ++P D+ LG + ++ YQ +GVV G
Sbjct: 549 GVRNLERQIGKVIRKVAKSVAMEEKYSKTIQPKDITRLLGIELFDKEEYQTEDVSGVVTG 608
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LAWT VGGEIL+IE+ L RG+ KLTL+G LGDVMKESA AL Y++A + L I +F
Sbjct: 609 LAWTQVGGEILYIESILSRGKG-KLTLSGQLGDVMKESASAALSYLKATASHLDIDHRVF 667
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
++ +HVH+P GA+PKDGPSAGI M TSL S T+RKV+ +AMTGEITLRG+VLPVGGI
Sbjct: 668 EHFDLHVHIPAGAVPKDGPSAGIAMFTSLASVYTQRKVKEKLAMTGEITLRGRVLPVGGI 727
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDT 782
KEKILAAKR+GI E+ILCE+NRKDI+EI Y++ L FH+V+++++VL ALL EKV
Sbjct: 728 KEKILAAKRAGIKEVILCEKNRKDIDEIQSNYIEDLTFHFVNHVDQVLDIALLPEKVKRQ 787
Query: 783 TDI 785
D+
Sbjct: 788 FDL 790
>gi|110639366|ref|YP_679575.1| ATP-dependent protease La [Cytophaga hutchinsonii ATCC 33406]
gi|110282047|gb|ABG60233.1| ATP-dependent protease La [Cytophaga hutchinsonii ATCC 33406]
Length = 813
Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats.
Identities = 405/770 (52%), Positives = 575/770 (74%), Gaps = 3/770 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+PIL +RN++LFPGV +PI VGR+KS++L++ K G V+Q + EEP D++
Sbjct: 30 LPILPVRNIVLFPGVVLPITVGRQKSIRLVKKFYKGDRTIGVVAQENQKSEEPSFQDIFK 89
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VG VA+I+R+ +PDG TT I+QG++RF ++E EPFM+ +V +L DI P +K E
Sbjct: 90 VGTVAKILRMFVLPDGNTTIIIQGKRRFKIEEQVQDEPFMQAKVSMLKDIHPDMSKK-EV 148
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+AL+ ++++ + K++++ E P++ +++ ++ + +F S+NI+ + KQ+LLE
Sbjct: 149 KALLQSVKESATKILKMNPE-IPQDAQIAINNIESENFLTHFLSSNINAELKDKQKLLEF 207
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+R LL L+ K++Q++E+K I K ++D+QQ++YFL+QQIK +Q+ELG +
Sbjct: 208 DDAVERATWLLQLMDKDIQMLEIKREIHTKVHTDIDQQQRDYFLRQQIKVLQDELGDFSS 267
Query: 250 DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFS 309
+ E + L+ KA T KWS +V F+KE+ KL+R++P +PDY V Y++ ++ LPWG S
Sbjct: 268 EQEFERLKEKALTKKWSDKVRAHFDKEMSKLQRVNPMAPDYPVTFNYLELLVDLPWGENS 327
Query: 310 KDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGK 369
DNF+L RA+ +LD DHFGL KVK+RI+E+LAVLK+K +MK+PI+CLYGPPGVGKTSLGK
Sbjct: 328 TDNFDLVRAKEILDEDHFGLTKVKQRILEYLAVLKLKNNMKAPILCLYGPPGVGKTSLGK 387
Query: 370 SIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDK 429
SIA++L RKY+R+SLGG+HDE+EIRGHR+TYIGAM G+IIQ ++R+ TSNPVF+LDEIDK
Sbjct: 388 SIAKALDRKYIRMSLGGVHDESEIRGHRKTYIGAMPGKIIQGIKRSETSNPVFILDEIDK 447
Query: 430 IDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRME 489
I D++GDPSSALLEVLDPEQN++F DN+L++++DLS VLFIAT+N+L +I L DRME
Sbjct: 448 ISKDFRGDPSSALLEVLDPEQNSSFMDNFLEVEYDLSKVLFIATSNALDTIQPALRDRME 507
Query: 490 LIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEK 549
+I+++GY +EEK++IA ++LIPKQ EHG + DI F+ I K+I+DYTRESGVR LE+
Sbjct: 508 IIEINGYTLEEKIQIAKKYLIPKQKEEHGLKAKDISFTDAAIVKIIEDYTRESGVRNLER 567
Query: 550 QIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSVG 609
+I AV+R I A +T K++P+ + LG+ + +D YQ + AG+V GLAWT G
Sbjct: 568 KIGAVVRNIAVAIAMETAYTKKIQPAQVREILGSEDFEKDTYQQDDLAGIVTGLAWTPYG 627
Query: 610 GEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVHV 669
GEIL IE+ + +G+ KLTL+G LGDVMKESA AL +RA+ D +GI +F+++ +HV
Sbjct: 628 GEILTIESIISKGKG-KLTLSGQLGDVMKESASAALSLLRANVDAIGIDHRVFDHFDLHV 686
Query: 670 HVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILAA 729
HVP GA PKDGPSAGI + TSL S T+RK++ +AMTGEITLRGKVLPVGGIKEKILAA
Sbjct: 687 HVPAGATPKDGPSAGIALYTSLASTFTQRKIKPALAMTGEITLRGKVLPVGGIKEKILAA 746
Query: 730 KRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
KR+GI EIIL ++N+KDIEEI+ + LKFH+V +EVL ALL++K+
Sbjct: 747 KRAGIKEIILSKKNKKDIEEIHPPDIADLKFHFVETADEVLAIALLKQKI 796
>gi|29346247|ref|NP_809750.1| ATP-dependent protease [Bacteroides thetaiotaomicron VPI-5482]
gi|29338142|gb|AAO75944.1| ATP-dependent protease [Bacteroides thetaiotaomicron VPI-5482]
Length = 626
Score = 689 bits (1777), Expect = 0.0, Method: Composition-based stats.
Identities = 346/581 (59%), Positives = 458/581 (78%), Gaps = 4/581 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LRNM+LFPGV +PI VGR+ SLKL+R EKK + QR E+P DL++
Sbjct: 40 LPVLPLRNMVLFPGVFLPITVGRKASLKLVREAEKKHKDIAVICQRSAHTEDPKLEDLHN 99
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VG V I+RVLEMPD TTT I+QG +R L++I T P++KG V+LL + +P K+ D EF
Sbjct: 100 VGTVGRIVRVLEMPDQTTTVILQGMKRLRLKDIVDTHPYLKGEVELLEEDVPNKD-DKEF 158
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+ALV T +D++++ ++ ++ +++ NPM+ INF AN+ K +LL I
Sbjct: 159 QALVETCKDLTMRYIK--SSEMHQDSSFAIKNISNPMFLINFICANLPFKKDEKMDLLSI 216
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+ +++R Y LL +L++E+Q+ E+KASIQM+ RE++D+QQ+EYFLQQQIKTIQ+ELGG+
Sbjct: 217 NSLRERTYHLLEILNREVQLAEIKASIQMRAREDIDQQQREYFLQQQIKTIQDELGGSGQ 276
Query: 250 DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFS 309
+ E++E+R KA M W++EV +TF KEL KLER HPQSPD+SVQ+ Y+QT+++LPWGV++
Sbjct: 277 EQEIEEMRLKAVKMHWNAEVRDTFLKELAKLERTHPQSPDFSVQLNYLQTMLNLPWGVYT 336
Query: 310 KDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGK 369
DN NLK A+ L++DH+GLEKVKERI+EHLAVLK+KGDMKSPIICLYGPPGVGKTSLGK
Sbjct: 337 TDNLNLKNAEKTLNKDHYGLEKVKERILEHLAVLKLKGDMKSPIICLYGPPGVGKTSLGK 396
Query: 370 SIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDK 429
SIA +L RKYVR+SLGG+HDEAEIRGHR+TYIGAM GRII+SL +AG SNPVF+LDEIDK
Sbjct: 397 SIASALKRKYVRMSLGGVHDEAEIRGHRKTYIGAMPGRIIKSLIKAGASNPVFILDEIDK 456
Query: 430 IDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRME 489
+ +D +GDPSSALLEVLDPEQN +FHDN+LD+D+DLS VLFIATAN+L++I PLLDRME
Sbjct: 457 VSADRQGDPSSALLEVLDPEQNTSFHDNFLDVDYDLSKVLFIATANNLNTIPGPLLDRME 516
Query: 490 LIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEK 549
LI+VSGYI EEKVEIA +HL+PK+L +G +K DIK K T+E +I+ YTRESGVR LEK
Sbjct: 517 LIEVSGYITEEKVEIARKHLLPKELEANGLKKTDIKIPKDTLEAIIESYTRESGVRELEK 576
Query: 550 QIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRD 589
+I ++RK ++ AT+ ++++P+DL FLGAP YTRD
Sbjct: 577 KIGKILRKSARQYATDGYFAKSEIKPTDLYEFLGAPEYTRD 617
>gi|134300398|ref|YP_001113894.1| ATP-dependent protease La [Desulfotomaculum reducens MI-1]
gi|134053098|gb|ABO51069.1| ATP-dependent protease La [Desulfotomaculum reducens MI-1]
Length = 810
Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats.
Identities = 367/779 (47%), Positives = 535/779 (68%), Gaps = 6/779 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+ +P+L LR +++FP + + + VGREKS++ I + +QR+ +EP D+
Sbjct: 6 KSLPLLPLRGILVFPYMVIHLDVGREKSIQAIEEAMVQDRMIFLATQREAQTDEPTVDDI 65
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y++G VAE+ ++L++P GT +V+G R +++ +P+ + V+ + K
Sbjct: 66 YNIGTVAEVKQLLKLPGGTIRVLVEGIARAKIEKYEHQDPYFRVEVQQYSEEF---EKGA 122
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EAL+ ++ + ++L PP E ++S+ + P + +++++ I KQ +L
Sbjct: 123 EVEALMRSLVYQFEQYVKLSKRIPP-ETVVSVVNLEEPGRLADIIASHLALKIEDKQNVL 181
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
E ++ DR +L ++ KEL+++EL+ I ++ R++M+K QKEY+L++Q+K IQ+ELG
Sbjct: 182 ESVEIVDRLEKLCGIVAKELEIVELERKINIRVRKQMEKTQKEYYLREQMKAIQKELGEK 241
Query: 248 INDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
+ E +E R K + K+ E E KE+ +LE++ P + + +V Y+ ++SLPW
Sbjct: 242 DERVAECEEFREKISKAKFPKEAEEKALKEVERLEKMPPMAAEAAVVRNYLDWMLSLPWS 301
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
+KD ++ A+ VL+ DH+GL+ KERI E+LA+ K+ MK PI+CL GPPGVGKTS
Sbjct: 302 KSTKDRIDINAAEEVLEADHYGLKDPKERITEYLAIRKLAKKMKGPILCLVGPPGVGKTS 361
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+S+A +L RK+VRISLGG+ DEAEIRGHRRTY+GAM GR+IQ ++ AG+ NPVF+LDE
Sbjct: 362 LGRSVARALDRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRVIQGMRTAGSKNPVFLLDE 421
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD++GDPSSALLEVLDPEQN+ F D+Y++ FDLS+V+FI TAN++ SI RPLLD
Sbjct: 422 IDKMASDFRGDPSSALLEVLDPEQNSTFSDHYIETPFDLSNVMFITTANNMYSIPRPLLD 481
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I +SGY EEK++IA RHL+PKQ+ +HG + I+ S+ TI K+I +YTRESGVR
Sbjct: 482 RMEVIQISGYTEEEKLQIAKRHLMPKQIKDHGLTEEMIQISENTILKVIREYTRESGVRN 541
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE++IA++ RK K+ KV +L FLG PRY + N + G V G+AWT
Sbjct: 542 LERKIASICRKTAKKIVAGQAEKVKVTTQNLEQFLGIPRYRYGVAEQNDEVGTVTGMAWT 601
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
VGG+ L IE + ++G ++TLTG LGDVMKESA +IR+ + ELGI QE+F W
Sbjct: 602 EVGGDTLVIEVTTYKG-TGRMTLTGKLGDVMKESAQAGYSFIRSRAQELGIDQEMFEKWD 660
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+H+PEGAIPKDGPSAGITM T++ S LT RKVR IAMTGEITLRG+VLPVGGIKEK+
Sbjct: 661 LHIHIPEGAIPKDGPSAGITMATAMASVLTGRKVRHDIAMTGEITLRGRVLPVGGIKEKV 720
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDI 785
+AA R+GI IIL +N+KD+E+I K L+F V +I++VL ALLE++V+DTT +
Sbjct: 721 MAAHRAGIKLIILPNDNKKDLEDIPVNIKKQLEFKLVDHIDQVLAIALLEKEVVDTTTV 779
>gi|114567168|ref|YP_754322.1| Endopeptidase La [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338103|gb|ABI68951.1| Endopeptidase La [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 812
Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats.
Identities = 368/780 (47%), Positives = 533/780 (68%), Gaps = 6/780 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E E+P+L LR +++FP + + VGR+KS+ I +Q++ +E
Sbjct: 4 EEHQTYRELPMLPLRGVLVFPYTVIHLDVGRKKSINAIEDAMLGSKEIFLATQKEAQTDE 63
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
PD D+Y+VG VAEI ++L+MP GT +V+G R + A +P+MK RV+ L D
Sbjct: 64 PDEEDIYEVGTVAEIRQILKMPGGTMRVLVEGLFRAEINAYLANDPYMKVRVEELRD--- 120
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
K K E EAL+ + + + + + PP E ++S+ + + +++++ I
Sbjct: 121 KKIKSPELEALMRNLVGQFEQYVRMSKKIPP-ETVVSVVAIEEGGRLADVIASHLNLRIN 179
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
KQ +LE+S + R L LL KE++V+EL+ I ++ R++M+K QKEY+L++QIK IQ
Sbjct: 180 EKQRILELSDINKRLNYLCELLAKEMEVLELERKINIRVRKQMEKTQKEYYLREQIKAIQ 239
Query: 242 EELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG + EV+E R + + E KEL +LE++ P + V Y+ I
Sbjct: 240 KELGEKDERSSEVEEFRERIKKANMPKDAEEKAFKELERLEKMPPMVAEAVVVRNYLDWI 299
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+SLPW + ++D +LK A+++LD DH+GLEK KERI+E+LA+ K+ MK PI+CL GPP
Sbjct: 300 LSLPWSLETRDRLDLKAAEAILDEDHYGLEKPKERILEYLAIRKLAKKMKGPILCLVGPP 359
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKS+ SLGRK++R+SLGG+ DEAEIRGHRRTY+G+M GRI+Q ++ AG+ NP
Sbjct: 360 GVGKTSLGKSVGRSLGRKFIRMSLGGIRDEAEIRGHRRTYVGSMPGRILQGMKTAGSKNP 419
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VF+LDEIDK+ D++GDP+SALLEVLDPEQN F D+YL+I FDLS V+FI TANS+ +I
Sbjct: 420 VFLLDEIDKMTMDFRGDPASALLEVLDPEQNYIFSDHYLEIPFDLSKVMFITTANSVFNI 479
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
RPLLDRME+I+++GY E+KV IA +L+PKQ+ EHG ++++I FS+ T+ ++I +YTR
Sbjct: 480 PRPLLDRMEIIEITGYTEEDKVHIATDYLVPKQIKEHGLKESNITFSEGTLRRIIREYTR 539
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+GVR LE+QIA++ RK+ ++ + V + L FLGA RY + GV
Sbjct: 540 EAGVRNLERQIASICRKVARQVVEDKDTFVHVASNSLNRFLGAGRYRYGVAESENQVGVA 599
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT GG+IL IE +L +G+ LTLTG LG+VMKESA AL Y+R+ +DELGI+ E
Sbjct: 600 TGLAWTESGGDILSIEVALLKGKG-NLTLTGKLGEVMKESAQAALTYVRSKADELGINDE 658
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
I + + VH+H+PEGAIPKDGPSAGIT+ T+L SA++ VR+ +AMTGEITLRG++LP+G
Sbjct: 659 IRDKYDVHIHIPEGAIPKDGPSAGITLATALASAMSGLPVRSDVAMTGEITLRGRILPIG 718
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVI 780
G+KEKILAA R+GI +++L EN+KD+ EI + +K VS+++EVL+E LL+ + I
Sbjct: 719 GVKEKILAAHRAGIAKVLLPVENKKDLAEIPAPVKRKIKLVLVSHMDEVLEETLLKLEAI 778
>gi|91203232|emb|CAJ72871.1| strongly similar to ATP-dependent protease La [Candidatus Kuenenia
stuttgartiensis]
Length = 805
Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats.
Identities = 346/763 (45%), Positives = 518/763 (67%), Gaps = 6/763 (0%)
Query: 9 EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLY 68
E P+L +++ ++FPG+ + V ++ +KL+ V + +Q+D D++ ++D+Y
Sbjct: 36 ETPVLPVKDTVVFPGMVAALSVYTDRDIKLLNDVLAGNRFLTLTAQKDKDIKVLKQSDIY 95
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHE 128
+ A ++++L MPD + +VQG +R + E ++P+ K ++ + DI+ D E
Sbjct: 96 ECATAAVVLQMLRMPDNSAKMLVQGLRRVKIGEYVQSDPYFKAKISAIEDII---EDDRE 152
Query: 129 FEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLE 188
EAL D M+ +M P EL +++ +NP + +++++ S+A KQ++LE
Sbjct: 153 TEALARNAADQFAHMISMMPSLP-EELKIAVVNIENPSRLADLITSHLNVSVAEKQKVLE 211
Query: 189 ISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG-GN 247
++ +K R ++ L+ EL+V+E+ IQ + R EM+K QKEY+L+QQ+K IQ+ELG G+
Sbjct: 212 LANVKLRLQKVTTLIASELEVLEMATKIQSQVRNEMEKGQKEYYLRQQLKAIQDELGEGD 271
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
+E++EL+ K K +E + E+EL +L ++H S +Y+V Y+ +I+LPW V
Sbjct: 272 ERSMEIKELKEKIENAKMPAEAKKEAERELERLAKMHSASAEYTVSRTYLDLLIALPWSV 331
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
+KD ++K A ++LD DH+ LEK+KERI+E+LAV K+K DMK PI+C GPPG GKTS+
Sbjct: 332 STKDQLDIKTASTILDEDHYDLEKLKERILEYLAVRKLKDDMKGPILCFVGPPGTGKTSV 391
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
G SIA S+GRK+VR+SLGG+ DEAEIRGHRRTYIGA+ GRIIQ L++A ++NPVF+LDEI
Sbjct: 392 GMSIARSMGRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRIIQGLKKAESNNPVFMLDEI 451
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ +D++GDPS+ALLEVLDPEQN+AF D+YLD+ FDLS+V+FI TAN L ++ L DR
Sbjct: 452 DKLGADFRGDPSAALLEVLDPEQNHAFSDHYLDVAFDLSNVMFITTANILDTVPPALKDR 511
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
ME++++SGY EEK+ I + ++PKQL HG ++ + + I+ +I DYTRE+G+R L
Sbjct: 512 MEVLELSGYTAEEKISIVKKFILPKQLKAHGLKEEQLTITDDAIKMVITDYTREAGLRNL 571
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
E++IA + RK K+ A+ + + L T LG ++ + + DAGV GLAWT
Sbjct: 572 EREIAHLCRKTAKKIASGEETSVTINAEQLNTLLGPIKFFSEAAERTTDAGVATGLAWTQ 631
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
GG+ILFIE + G KLTLTG LGD+MKESA A+ YIR+ + L IS + F+ +
Sbjct: 632 AGGDILFIEATFMPG-TGKLTLTGCLGDIMKESAQAAMSYIRSKLESLKISFKDFDKYDF 690
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
H+HVP GAIPKDGPSAG+TM +L+S L + + +AMTGEITLRG+VLPVGGIKEK+L
Sbjct: 691 HIHVPAGAIPKDGPSAGVTMAMALISLLKGTPILSNVAMTGEITLRGRVLPVGGIKEKVL 750
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVL 770
AAKR+GIT ++L + N KD+ E+ + K L F +V ++E+L
Sbjct: 751 AAKRAGITTVVLPKRNEKDLTEVPENAKKRLNFAFVERVDEML 793
>gi|118581016|ref|YP_902266.1| ATP-dependent protease La [Pelobacter propionicus DSM 2379]
gi|118503726|gb|ABL00209.1| ATP-dependent protease La [Pelobacter propionicus DSM 2379]
Length = 823
Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats.
Identities = 359/773 (46%), Positives = 528/773 (68%), Gaps = 3/773 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E + +E+P+L +R+++++P + +P+ VGRE S+K + +Q ++ E+
Sbjct: 14 EELKIPDELPLLPVRDVVVYPFMIIPLFVGREMSVKAVDSALAGDRMILLATQYEISEED 73
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P +Y VG VA I+R+L++PDG +VQG + + E T+ +PF RV+ L D +P
Sbjct: 74 PPPDKIYGVGTVAMIMRMLKLPDGRIKILVQGLAKARITEFTSEKPFYTVRVERLND-MP 132
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+ E EALV T+++ K++EL + P E+I+ + ++P + ++N+ +A
Sbjct: 133 LLDATLETEALVRTVREQLAKVVELGKQVSP-EVIVILENIQDPGSMADLIASNMGLKVA 191
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
Q+LLE R ++ LL++E++++ ++A IQ REEM K Q+EY+L++Q++ IQ
Sbjct: 192 DAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQREYYLREQMRAIQ 251
Query: 242 EELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
+ELG ++ E+R + + V + K+L +LE +HP + + + Y+ ++
Sbjct: 252 QELGDGEGKEDLIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEAGIIRTYLDWLV 311
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
+PW S+D+ ++ RA+ +L+ DHF L+K+KERI+E L+V K+K MK PI+C GPPG
Sbjct: 312 EIPWSKSSRDSLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMKGPILCFVGPPG 371
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLGKSIA ++ RK+VRISLGG+ DEAEIRGHRRTYIGA+ GRIIQ +++AGT+NPV
Sbjct: 372 VGKTSLGKSIARAMNRKFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQGMKQAGTNNPV 431
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
F+LDE+DK+ DYKGDPSSALLEVLDPEQN++F D+Y++ ++LS+V+FIATAN + +
Sbjct: 432 FMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMFIATANQIDPVP 491
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
L DRME+I +SGY EEK+EI+ R L+P+Q+ E+G ++ +I F + I ++I YTRE
Sbjct: 492 SALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEAIAEIIAKYTRE 551
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+G+R LE++I V RK+ ++ A T+V +L TFLGAP++ R+ + GVV
Sbjct: 552 AGLRNLEREIGTVCRKVARKVAEGQKRITRVTAKNLHTFLGAPKFMREEDLDRNEIGVVN 611
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLAWT VGGEIL IE S +G+ LTLTG LGDVMKESA A YIRAH++EL I E
Sbjct: 612 GLAWTPVGGEILHIEASQMQGK-AGLTLTGQLGDVMKESAQAAHSYIRAHAEELSIKPEF 670
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F ++HVHVP GAIPKDGPSAG+ M T+LVS +TR VR +AMTGEITLRGKVLP+GG
Sbjct: 671 FQQHEIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEITLRGKVLPIGG 730
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
+KEKILAA RS + +I+ +N+KD+E++ LK +K V+ I+EVLK AL
Sbjct: 731 LKEKILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLKLAL 783
>gi|89895941|ref|YP_519428.1| hypothetical protein DSY3195 [Desulfitobacterium hafniense Y51]
gi|89335389|dbj|BAE84984.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 804
Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats.
Identities = 361/770 (46%), Positives = 524/770 (68%), Gaps = 5/770 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
+ E+P+L LR +++FP + + + VGRE+S+ I +Q++ +++ PD D
Sbjct: 4 ERELPLLPLRGILVFPYMVIHLDVGRERSMAAIEQAMMDERLILLSAQKETEIDSPDPDD 63
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
++ +G +AEI ++L++P GT +V+G+ R + E EP+ K RV+ + + K
Sbjct: 64 IHTIGTLAEIKQLLKLPGGTMRVLVEGKSRGKILEFITDEPYFKVRVEEAEEGV--KENT 121
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E +AL + + +L ++ P+E + ++ + + +++++ + KQ +
Sbjct: 122 PEIDALTHGVIHQFEEYAKLS-KKVPQETLGTVLGVNDSGRLADIVASHLNLKLGDKQAI 180
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LE ++ R RL ++ +E +++EL+ I ++ R++M+K QKEY+L++Q+K IQ+ELG
Sbjct: 181 LESLEVAQRLERLTEIIMRENEILELERRIGLRVRKQMEKTQKEYYLREQMKAIQKELGD 240
Query: 247 -NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
+ EV+E R K A K EVAE KE+ +LE++ S + +V Y+ I++LPW
Sbjct: 241 KDEKQAEVEEYREKVAQAKLPEEVAERALKEIDRLEKMPQASSEGTVVRTYLDWILALPW 300
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
SKD ++KRA+ +L+ DH+GL K+KERI+E LA+ K+ MKSPIIC GPPGVGKT
Sbjct: 301 TTMSKDKTDIKRAEKILNDDHYGLAKIKERILEFLAIRKLTPKMKSPIICFVGPPGVGKT 360
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SL KS+A +L RK+VR+SLGG+ DEAEIRGHRRTYIGA+ GRIIQ ++ AGT+NPVF+LD
Sbjct: 361 SLAKSVARALDRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRIIQGMRTAGTANPVFLLD 420
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ SD++GDP++ALLEVLDPEQN +F D+YLD+ +DLSH LFI TANSL SI RPLL
Sbjct: 421 EIDKMASDFRGDPAAALLEVLDPEQNFSFSDHYLDLPYDLSHTLFIMTANSLYSIPRPLL 480
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I +SGY +EKV IA R+L+PKQ+ HG + + ++ K I KL+ YTRESGVR
Sbjct: 481 DRMEVISLSGYTEDEKVNIAKRYLVPKQMKAHGLKASQLEIGDKVILKLVQGYTRESGVR 540
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE+QIA + RK+ T ++ P L FLG+PRY ++ + + G GLA+
Sbjct: 541 NLERQIANLCRKVATRVVKKEWKTAELRPEMLEEFLGSPRYQFEKARIKPEIGAATGLAY 600
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG++L IE G+ +LTLTG LGDVMKESA ++R+HS ELGI + +
Sbjct: 601 TEVGGDVLTIEVIPLPGKG-QLTLTGKLGDVMKESAYAGRTFVRSHSRELGIPDDFYEKT 659
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGAIPKDGPSAGITM T++ SAL +R V + +AMTGEITLRG VLP+GG+KEK
Sbjct: 660 DLHIHVPEGAIPKDGPSAGITMATAMASALAKRAVPSDLAMTGEITLRGNVLPIGGVKEK 719
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
+LAA R+GI ++IL E+NRKD+EE+ + K L+FH+VS + EV+K ALL
Sbjct: 720 VLAAHRAGIKQVILPEQNRKDLEEVPENVRKELEFHFVSRMEEVIKIALL 769
>gi|121534153|ref|ZP_01665978.1| ATP-dependent protease La [Thermosinus carboxydivorans Nor1]
gi|121307256|gb|EAX48173.1| ATP-dependent protease La [Thermosinus carboxydivorans Nor1]
Length = 773
Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats.
Identities = 354/769 (46%), Positives = 521/769 (67%), Gaps = 6/769 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR +++FP + + + VGREKS+ + SQ+D + P+ D++
Sbjct: 8 IPLLPLRGILVFPYMIIHLDVGREKSISALEEAMVHDRLIMLASQKDAQNDRPEPDDIFR 67
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G +AEI ++L++P GT +V+G R + T +PF + ++ +I + K E
Sbjct: 68 IGTIAEIKQLLKLPGGTIRVLVEGLHRAQILRYTELDPFFQVEIEEFDEI---QTKTPEI 124
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL T + ++L + PP LI S+ + P + +++++ I KQ LLE
Sbjct: 125 EALTRTAISQFEQWVKLSKKIPPETLI-SVVTVEEPGRLSDLIASHLALKIEDKQALLEA 183
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
K+R +L +L +E++++EL+ I ++ R++M+K QKEY+L++Q+K IQ+ELG +
Sbjct: 184 VGYKERLEKLCEILGREMEILELEKKINVRVRKQMEKTQKEYYLREQLKAIQKELGEKDD 243
Query: 250 DI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
+ E E R + + EVAE KE+ +LE++ P + + +V Y+ +++LPW
Sbjct: 244 RLAEADEYRQRLKELDIPKEVAEKINKEIERLEKMPPMAAESAVIRTYLDWLLALPWTKE 303
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
+ D ++ A+ +LD DH+GL+KVKERI+E+L+V K+ MK PI+CL GPPGVGKTSL
Sbjct: 304 TTDRLDIAVAEKILDEDHYGLQKVKERILEYLSVRKLTETMKGPILCLVGPPGVGKTSLA 363
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA ++ RK+VR+SLGG+ DEAEIRGHRRTY+GA+ GRIIQ ++ G+ NPVF+LDEID
Sbjct: 364 RSIARAMERKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGMRTVGSKNPVFLLDEID 423
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ +D++GDPS+ALLEVLDPEQNN F D+Y+++ FDLS VL++ TAN + +I RPLLDRM
Sbjct: 424 KMSADFRGDPSAALLEVLDPEQNNTFSDHYIEVPFDLSRVLWVVTANVMHNIPRPLLDRM 483
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I + GY EEKV+IA R+LIPKQ +HG + I FS+ TI+K+I DYTRE+GVR LE
Sbjct: 484 EVISIPGYTEEEKVQIAKRYLIPKQTRDHGLSEGQIIFSEGTIQKVIRDYTREAGVRNLE 543
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
+ IA + RK ++ K+ +L TFLGAP+Y + + + GV GLAWT V
Sbjct: 544 RNIAGLCRKAARQIVQEQRTAVKITAQNLHTFLGAPKYRHAQAEKSPQVGVATGLAWTEV 603
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GG++L E S+ +G+ KLTLTG LG+VM+ESA YIR + ELGI +E +H
Sbjct: 604 GGDVLAAEVSIMKGKG-KLTLTGQLGEVMRESAQAGFTYIRTRAKELGIDEEFHEKTDIH 662
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+H+PEGAIPKDGPSAGITM T++ SALT + VR+ +AMTGEITLRG+VLPVGGIKEK+LA
Sbjct: 663 IHLPEGAIPKDGPSAGITMATAVASALTGQPVRSDLAMTGEITLRGRVLPVGGIKEKVLA 722
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
A R+GI ++IL +ENR+D+EEI + L+F +V +++EVL+ AL+ +
Sbjct: 723 AHRAGIKKVILPQENRRDLEEIPANVKRSLEFIFVEHMDEVLRAALVTD 771
>gi|148262770|ref|YP_001229476.1| ATP-dependent protease La [Geobacter uraniumreducens Rf4]
gi|146396270|gb|ABQ24903.1| ATP-dependent protease La [Geobacter uraniumreducens Rf4]
Length = 817
Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats.
Identities = 352/774 (45%), Positives = 526/774 (67%), Gaps = 4/774 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E + + +P+L +R+++++P + +P+ VGRE S+ + Y K +Q+D+ E+
Sbjct: 8 EELSIPDVLPLLPVRDVVVYPYMILPLFVGREISINAVDYALSKDRLIFLATQKDVSEED 67
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P +Y VG VA I+R+L++PDG +VQG + + A +PF R++ L + +
Sbjct: 68 PAPDMIYGVGTVAMIMRMLKLPDGRVKILVQGLTKGRITGYEAEKPFYSVRIERLVEPMV 127
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+N E EA + T+++ K++ L P E+++ + + P + ++NI +
Sbjct: 128 PENS-LETEAFIRTVKEQLAKIVSLGKVVSP-EVMVIVENMQEPGSLADLIASNIGLKVE 185
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
Q LLEI +R R+ L+KE +++ ++A IQ +EEM K Q+EY+L++Q++ IQ
Sbjct: 186 EAQGLLEIIDPIERLKRVNEFLNKEFELLSMQARIQSAAKEEMGKSQREYYLREQLRAIQ 245
Query: 242 EELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG + E+ ELR +K V + K+L +LE++HP + + + ++ +
Sbjct: 246 QELGETDARSEEIAELRKAIENVKMPPNVEKEALKQLGRLEQMHPDAAESGMLRTFLDWM 305
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+ LPW +KD+ +K+A+ +LD DH+ LEK+K+RI+E LAV K+K MK PI+C GPP
Sbjct: 306 VELPWSKSTKDSLEIKKAKEILDEDHYYLEKIKDRILEFLAVRKLKKKMKGPILCFVGPP 365
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKSIA ++GRK+VRISLGG+ DEAEIRGHRRTY+GAM GRIIQ L++AG++NP
Sbjct: 366 GVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGLKQAGSNNP 425
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VF+LDE+DK+ +D++GDPSSALLEVLDPEQN++F D+Y+++ F LS V+FIATAN + ++
Sbjct: 426 VFMLDELDKLGADFRGDPSSALLEVLDPEQNHSFSDHYINLPFSLSDVMFIATANQIDTV 485
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PL DRME+I +SGY EEK++IA R+L+P+Q+ E+G + I FS + I+ +I YTR
Sbjct: 486 PGPLRDRMEVISLSGYTEEEKLQIAKRYLVPRQIKENGITEKVITFSDEAIKGVISKYTR 545
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+G+R LE++I +V RK+ ++ A + + + +LG PR+ R+ + GVV
Sbjct: 546 EAGLRNLEREIGSVCRKVARKVAEGEKKQFVINAATVAKYLGPPRFLREEEMEYNEIGVV 605
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGGE+LF+E ++ +G+ LTLTG LGDVMKES AL YIRA + EL + ++
Sbjct: 606 TGLAWTPVGGEVLFVEATIMKGKG-GLTLTGQLGDVMKESVQAALSYIRARAAELQLPED 664
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
++ +HVHVP GAIPKDGPSAG+TM T+LVSAL + V+ +AMTGEITLRGKVLP+G
Sbjct: 665 FYSTMDIHVHVPAGAIPKDGPSAGVTMATALVSALAKIPVKKDVAMTGEITLRGKVLPIG 724
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
G+KEKILAA R GIT II+ E+NRKD+E++ LK +K + I++VLK AL
Sbjct: 725 GLKEKILAAIRLGITTIIIPEQNRKDLEDVPRHILKKVKIVFAKTIDDVLKVAL 778
>gi|153004960|ref|YP_001379285.1| ATP-dependent protease La [Anaeromyxobacter sp. Fw109-5]
gi|152028533|gb|ABS26301.1| ATP-dependent protease La [Anaeromyxobacter sp. Fw109-5]
Length = 828
Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats.
Identities = 363/784 (46%), Positives = 525/784 (66%), Gaps = 13/784 (1%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
KED + + +PIL LRN + FPG +P+ VGR+K++ LI+ + G V+QR + E+
Sbjct: 26 KED-IPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDEQVIGVVTQRRAEEED 84
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P ADLY VG VA ++++L+M + + +VQG RF + E+ P++K RV + D
Sbjct: 85 PGAADLYSVGTVARVVKLLKMGEDNYSLVVQGLARFKVLELVQESPYLKARVDPVED--K 142
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPP--RELILSMRRNKNPMYQINFASANISTS 179
D E EAL ++ ++ +++ELM E P EL+ S+ +P + + +AN+
Sbjct: 143 SITDDVEVEALAINLKKLAREVIELMPELPAAATELVESI---THPGHLADLIAANVDVP 199
Query: 180 IAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKT 239
I KQ++LE + +K R +L LL+++ ++++L I + EM K Q+EY+L+QQ+K
Sbjct: 200 IEEKQQVLETTDLKSRMKLVLELLNRKREILKLSNKIDSAVKGEMSKTQREYYLRQQLKA 259
Query: 240 IQEELGGNINDIEVQELRTKAATMK-WSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQ 298
I+EELG + E + + EV + +KEL +L+ + S +Y+V Y+
Sbjct: 260 IKEELGELGEEEEELDELQERLKKAGLPPEVEKVAQKELNRLKSIPTASSEYTVARTYLD 319
Query: 299 TIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYG 358
I LPW S DN +++ A+ +LD DH+GL+K+K+RI+E+LAV K+K DM+ PI+C G
Sbjct: 320 WIADLPWSKKSDDNLDIENARQILDADHYGLDKIKKRILEYLAVRKLKNDMRGPILCFVG 379
Query: 359 PPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTS 418
PPGVGKTSLG+SIA S+GRK+VR+SLGG+ DEAEIRGHRRTY+GA+ GRIIQS+++AGT
Sbjct: 380 PPGVGKTSLGQSIARSIGRKFVRLSLGGVRDEAEIRGHRRTYVGALPGRIIQSMKKAGTV 439
Query: 419 NPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
NPV +LDEIDK+ +D++GDPS+ALLEVLDPEQN++F D+YLD+ +DLS V+FI TAN L
Sbjct: 440 NPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNHSFSDHYLDLAYDLSKVMFIGTANLLD 499
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
I PL DRME++++ GY EEKV IA HLIPKQL EHG + I ++K + K+I Y
Sbjct: 500 PIPGPLKDRMEILELPGYTFEEKVHIAQNHLIPKQLREHGLSADAIAITEKALIKIIMAY 559
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHT---TKVEPSDLVTFLGAPRYTRDRYQGNG 595
TRE+GVR LE++IA V R + E A+ + +E SD+ + LG ++ + +
Sbjct: 560 TREAGVRNLERRIADVCRAVAVEVASGKLQAGGKRAIEDSDVESMLGPEKFYNETAERTE 619
Query: 596 DAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDEL 655
GV GLAWT+ GG+ILFIE + G+ LTLTG LGDVMKESA AL Y+R+ +D L
Sbjct: 620 IPGVATGLAWTAAGGDILFIEATKMTGKG-SLTLTGQLGDVMKESAQAALSYLRSKADNL 678
Query: 656 GISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGK 715
GI +H+H P G+IPKDGPSAG+T++T+LVS LT +VR+ +AMTGE+TLRG
Sbjct: 679 GIPSNFLERTDIHIHFPAGSIPKDGPSAGVTILTALVSLLTGNRVRSDVAMTGEVTLRGL 738
Query: 716 VLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
VLPVGGIKEK+LAA R+GI II+ N +D+ ++ + K L+F + ++++EVLK AL
Sbjct: 739 VLPVGGIKEKVLAAHRAGIKRIIIPARNERDLVDVPEQARKELEFVFAAHMDEVLKAALE 798
Query: 776 EEKV 779
E+ +
Sbjct: 799 EDPI 802
>gi|145620954|ref|ZP_01776962.1| ATP-dependent protease La [Geobacter bemidjiensis Bem]
gi|144942731|gb|EDJ77848.1| ATP-dependent protease La [Geobacter bemidjiensis Bem]
Length = 816
Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats.
Identities = 350/774 (45%), Positives = 526/774 (67%), Gaps = 4/774 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E ++ + +P+L +R+++++P + +P+ VGRE S+ + Y K +QRD+ E+
Sbjct: 8 EELNIPDVLPLLPVRDVVVYPYMILPLFVGREISISAVDYALSKDRMIFLATQRDVGDED 67
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P +Y+VG VA I+R+L++PDG +VQG + + E A +PF R+ + +
Sbjct: 68 PAPEAIYEVGTVAMIMRMLKLPDGRVKILVQGLTKARITEYLAEKPFYSVRIDRIVEPAL 127
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+N E EAL+ T+++ K++ L P E+++ + + P + ++NI +
Sbjct: 128 QENT-LEAEALIRTVKEELGKIVALGKAVSP-EVMVIVENMQEPGSLADLVASNIGLKVE 185
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
Q LLE+ +R R+ LL+KE +++ ++A IQ +EEM K Q+EY+L++Q++ IQ
Sbjct: 186 EAQGLLEVIDPLERLKRVNDLLNKESELLNMQARIQSAAKEEMGKSQREYYLREQLRAIQ 245
Query: 242 EELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG + E+ ELR + K V + K+L +LE++HP + + + ++ +
Sbjct: 246 QELGETDARSEEIAELRKSIESAKMPQPVEKEALKQLGRLEQMHPDAAEAGMLRTFLDWM 305
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+ +PWG +KD+ + RA +L+ DH+ LEKVKERI+E LAV K+K MK PI+C GPP
Sbjct: 306 VDIPWGKSTKDSLEINRASEILNEDHYFLEKVKERILEFLAVRKLKKKMKGPILCFVGPP 365
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKSIA ++GRK+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ L++AG++NP
Sbjct: 366 GVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGSNNP 425
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VF+LDE+DK+ SD++GDPSSALLEVLDPEQNN+F D+Y+++ F+LS+V+FIATAN + +I
Sbjct: 426 VFMLDELDKLGSDFRGDPSSALLEVLDPEQNNSFSDHYINLPFNLSNVMFIATANQMDTI 485
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PL DRME+I++SGY EEK+ IA R+L+P+Q+ E+G + + FS + + +I YTR
Sbjct: 486 PGPLRDRMEVINLSGYTEEEKLGIAKRYLVPRQVKENGITDDIVAFSDEALRTVISKYTR 545
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+G+R LE+++ ++ RK+ ++ A + + +LG P++ R+ + GVV
Sbjct: 546 EAGLRNLEREVGSICRKVARKVAEGKGEHFAISAGTVAKYLGPPKFLREEEMEKNEVGVV 605
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGGE+LF+E ++ +G+ LTLTG LGDVMKES AL YIR+ + + I ++
Sbjct: 606 TGLAWTPVGGEVLFVEATVMKGK-GALTLTGQLGDVMKESVQAALSYIRSKTADFDIPED 664
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
+ +HVHVP GAIPKDGPSAG+TM T+LVSALT+ VR +AMTGEITLRGKVLP+G
Sbjct: 665 FNSTTDIHVHVPAGAIPKDGPSAGVTMATALVSALTKIPVRKEVAMTGEITLRGKVLPIG 724
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
G+KEKILAA R G+T +++ +N+KD+E++ LK LK SNI+EVL AL
Sbjct: 725 GLKEKILAAARLGVTTVVIPVQNQKDLEDVPKTILKKLKIVPASNIDEVLAVAL 778
>gi|109649194|ref|ZP_01373086.1| ATP-dependent protease La [Desulfitobacterium hafniense DCB-2]
gi|109639592|gb|EAT49149.1| ATP-dependent protease La [Desulfitobacterium hafniense DCB-2]
Length = 804
Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats.
Identities = 361/770 (46%), Positives = 525/770 (68%), Gaps = 5/770 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
+ E+P+L LR +++FP + + + VGRE+S+ I +Q++ +++ PD D
Sbjct: 4 ERELPLLPLRGILVFPYMVIHLDVGRERSMAAIEQAMMDERLILLSAQKETEIDSPDPDD 63
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
++ +G +AEI ++L++P GT +V+G+ R + E EP+ K RV+ + + +
Sbjct: 64 IHTIGTLAEIKQLLKLPGGTMRVLVEGKSRGKILEFITDEPYFKVRVEEVEEGVKENTP- 122
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E +AL + + +L ++ P+E + ++ + + +++++ + KQ +
Sbjct: 123 -EIDALTHGVIHQFEEYAKLS-KKVPQETLGTVLGVNDSGRLADIVASHLNLKLGDKQAI 180
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LE ++ R RL ++ +E +++EL+ I ++ R++M+K QKEY+L++Q+K IQ+ELG
Sbjct: 181 LESLEVAQRLERLTEIIMRENEILELERRIGLRVRKQMEKTQKEYYLREQMKAIQKELGD 240
Query: 247 -NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
+ EV+E R K A K EVAE KE+ +LE++ S + +V Y+ I++LPW
Sbjct: 241 KDEKQAEVEEYREKVAQAKLPEEVAERALKEIDRLEKMPQASSEGTVVRTYLDWILALPW 300
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
SKD ++KRA+ +L+ DH+GLEK+KERI+E LA+ K+ MKSPIIC GPPGVGKT
Sbjct: 301 TTMSKDKTDIKRAEKILNDDHYGLEKIKERILEFLAIRKLTPKMKSPIICFVGPPGVGKT 360
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SL KS+A +L RK+VR+SLGG+ DEAEIRGHRRTYIGA+ GRIIQ ++ AGT+NPVF+LD
Sbjct: 361 SLAKSVARALDRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRIIQGMRTAGTANPVFLLD 420
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ SD++GDP++ALLEVLDPEQN +F D+YLD+ +DLSH LFI TANSL SI RPLL
Sbjct: 421 EIDKMASDFRGDPAAALLEVLDPEQNFSFSDHYLDLPYDLSHTLFIMTANSLYSIPRPLL 480
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I +SGY +EKV IA R+L+PKQ+ HG + + ++ K I KL+ YTRESGVR
Sbjct: 481 DRMEVISLSGYTEDEKVNIAKRYLVPKQMKAHGLKASQLEIGDKVILKLVQGYTRESGVR 540
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE+QIA + RK+ T ++ P L FLG+PRY ++ + + G GLA+
Sbjct: 541 NLERQIANLCRKVATRVVKKEWKTAELRPEMLEEFLGSPRYQFEKARIKPEIGAATGLAY 600
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG++L IE G+ +LTLTG LGDVMKESA ++R+HS ELGI + +
Sbjct: 601 TEVGGDVLTIEVIPLPGKG-QLTLTGKLGDVMKESAYAGRTFVRSHSRELGIPDDFYEKT 659
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGAIPKDGPSAGITM T++ SAL +R V + +AMTGEITLRG VLP+GG+KEK
Sbjct: 660 DLHIHVPEGAIPKDGPSAGITMATAMASALAKRAVPSDLAMTGEITLRGNVLPIGGVKEK 719
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
+LAA R+GI ++IL E+NRKD+EE+ + K L+FH+VS + EV+K ALL
Sbjct: 720 VLAAHRAGIKQVILPEQNRKDLEEVPENVRKELEFHFVSRMEEVIKIALL 769
>gi|78044069|ref|YP_359193.1| ATP-dependent protease La [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996184|gb|ABB15083.1| ATP-dependent protease La [Carboxydothermus hydrogenoformans
Z-2901]
Length = 794
Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats.
Identities = 366/760 (48%), Positives = 521/760 (68%), Gaps = 6/760 (0%)
Query: 20 LFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYDVGVVAEIIRV 79
+FP + + + VGREKS+ I +Q+D ++EP D++ VG +AEI ++
Sbjct: 16 VFPYMVIHLDVGREKSIAAIDQAMISDRIICLATQKDAQIDEPTPDDIFAVGTIAEIKQL 75
Query: 80 LEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEFEALVSTIQDM 139
L++P GT +V+G QR +++ EPF + V++ + +K E +AL ++
Sbjct: 76 LKLPGGTLRVLVEGIQRAKIKKYIEKEPFFRVEVEVTQEE---VSKTPEIQALTRSLIYQ 132
Query: 140 SLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEISKMKDRGYRL 199
+ ++L PP E +++ + P + ++++ I KQ +LE +K R L
Sbjct: 133 FEQYVKLSKRIPP-ETAITVVNLEEPGRLADVVASHLPLKIEDKQRILEALDVKKRLEIL 191
Query: 200 LYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNINDI-EVQELRT 258
L +L +EL+++E++ I ++ R++M+K QKEY+L++Q+K IQ ELG + E +E R
Sbjct: 192 LEILARELEIVEIERRINLRVRKQMEKTQKEYYLREQLKAIQRELGEKDERVAEGEEYRE 251
Query: 259 KAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFSKDNFNLKRA 318
K K EV E KE+ KLE++ P + + +V Y+ I++LPW +KD ++K A
Sbjct: 252 KIKEAKLPKEVEEKALKEVEKLEKMPPMAAEATVVRNYLDWILALPWNRRTKDRLDIKLA 311
Query: 319 QSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGKSIAESLGRK 378
+ +L+ DH+GLEKVKERI+E+LAV K+ MK PI+C GPPGVGKTSL KSIA +L RK
Sbjct: 312 EQILEEDHYGLEKVKERILEYLAVRKLTKKMKGPILCFVGPPGVGKTSLAKSIARALERK 371
Query: 379 YVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDKIDSDYKGDP 438
+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ ++ AG+ NPVF+LDEIDK+ D++GDP
Sbjct: 372 FVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRNAGSQNPVFLLDEIDKMSMDFRGDP 431
Query: 439 SSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRMELIDVSGYII 498
S+ALLEVLDPEQNN+F D+Y+++ FDLSHVLFI TAN+L +I RPLLDRME+I + GY
Sbjct: 432 SAALLEVLDPEQNNSFSDHYIELPFDLSHVLFITTANNLYNIPRPLLDRMEVIHIPGYTE 491
Query: 499 EEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEKQIAAVIRKI 558
EEK+ IA ++L+PKQL EHG + ++K S T K+I +YTRESGVR LE+QIA++ RK
Sbjct: 492 EEKLVIAEKYLLPKQLKEHGLKPKNLKISTNTFLKIIREYTRESGVRNLERQIASLCRKA 551
Query: 559 TKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSVGGEILFIETS 618
KE T+ V K+ S+L +LG P+Y + + GV GLAWT VGG+++FIE S
Sbjct: 552 AKEIVTDNVEEVKITVSNLERYLGIPKYRYGIAEAEDEVGVATGLAWTEVGGDVMFIEVS 611
Query: 619 LHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVHVHVPEGAIPK 678
+ +G KL LTG LG+VMKESA YIR+ + ELGI + + +H+HVPEGAIPK
Sbjct: 612 VLKG-SGKLYLTGKLGEVMKESAQAGFSYIRSRAKELGIEENFHEKYDLHIHVPEGAIPK 670
Query: 679 DGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILAAKRSGITEII 738
DGPSAGITM T++VSAL+ +KVR +AMTGEITLRGKVLP+GG+KEKILAAKR+GI II
Sbjct: 671 DGPSAGITMATAMVSALSGQKVRKDVAMTGEITLRGKVLPIGGLKEKILAAKRAGIKTII 730
Query: 739 LCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
+ ENRK+++EI+ +GLKF V +++EVL+ AL+ ++
Sbjct: 731 IPHENRKELDEISPQVKRGLKFILVKHMDEVLEAALIRKE 770
>gi|110599644|ref|ZP_01387880.1| ATP-dependent protease La [Geobacter sp. FRC-32]
gi|110549691|gb|EAT62881.1| ATP-dependent protease La [Geobacter sp. FRC-32]
Length = 817
Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats.
Identities = 352/774 (45%), Positives = 526/774 (67%), Gaps = 4/774 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E ++ + +P+L +R+++++P + +P+ VGRE S+ + K +Q+D+ E+
Sbjct: 8 EELNIPDVLPLLPVRDVVVYPYMILPLFVGREISINAVDSALSKDRLIFLATQKDVSEED 67
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P +Y VG VA I+R+L++PDG +VQG + + E +PF R++ + + L
Sbjct: 68 PAPDMIYGVGTVAMIMRMLKLPDGRVKILVQGLTKGRITEYMEQKPFYSVRIERIVEPLL 127
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+N E EA + T+++ K++ L P E+++ + + + ++NI +
Sbjct: 128 PENT-LETEAFMRTVKEQLAKIVSLGKVVSP-EVMVIVENMQEAGSLADLIASNIGLKVE 185
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
Q LLEI +R R+ L+KE +++ ++A IQ +EEM K Q+EY+L++Q++ IQ
Sbjct: 186 EAQGLLEIIDPIERLKRVNDFLNKEFELLSMQARIQSAAKEEMGKSQREYYLREQLRAIQ 245
Query: 242 EELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG + E+ ELR A + + + K+L +LE++HP + + + ++ +
Sbjct: 246 QELGETDARSEEIAELRKAIANARMPQNIEKEALKQLGRLEQMHPDAAESGMLRTFLDWM 305
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+ LPW +KD+ +K+A+ +LD DH+ LEK+KERI+E LAV K+K MK PI+C GPP
Sbjct: 306 VELPWSKSTKDSLEIKKAKEILDEDHYFLEKIKERILEFLAVRKLKKKMKGPILCFVGPP 365
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKSIA ++GRK+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ L++AG++NP
Sbjct: 366 GVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGSNNP 425
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VF+LDE+DK+ +D++GDPSSALLEVLDPEQN++F D+Y+++ F+LS V+FIATAN + +I
Sbjct: 426 VFMLDELDKLGADFRGDPSSALLEVLDPEQNHSFSDHYINLPFNLSDVMFIATANQMDTI 485
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PL DRME+I +SGY EEK++IA R+L+P+Q E+G + I FS + ++ +I YTR
Sbjct: 486 PGPLRDRMEVISLSGYTEEEKLQIAKRYLVPRQTKENGITEKIITFSDEALKTIISKYTR 545
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+G+R LE++I +V RK+ + A + + + +LG PR+ R+ + GVV
Sbjct: 546 EAGLRNLEREIGSVCRKVARRVAEGEKRQFPINAATVTKYLGPPRFIREEEMKQNEIGVV 605
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGGE+LFIE ++ +G+ L+LTG LGDVMKES AL YIR + EL ++++
Sbjct: 606 TGLAWTPVGGEVLFIEATIMKGKG-GLSLTGQLGDVMKESVHAALSYIRTRAVELHLTED 664
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
++N +HVHVP GAIPKDGPSAG+TM T+LVSALT+ V+ +AMTGEITLRGKVLP+G
Sbjct: 665 FYSNMDIHVHVPAGAIPKDGPSAGVTMATALVSALTKTPVKKDVAMTGEITLRGKVLPIG 724
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
G+KEKILAA R GI II+ E+NRKDIE++ LK +K Y S I++VLK AL
Sbjct: 725 GLKEKILAAIRLGIVTIIIPEQNRKDIEDVPRHILKKVKIVYASTIDDVLKVAL 778
>gi|39998283|ref|NP_954234.1| ATP-dependent protease La [Geobacter sulfurreducens PCA]
gi|39985229|gb|AAR36584.1| ATP-dependent protease La [Geobacter sulfurreducens PCA]
Length = 819
Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats.
Identities = 353/781 (45%), Positives = 526/781 (67%), Gaps = 12/781 (1%)
Query: 3 EDHMQEE--------MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQ 54
+DH QE +P+L +R+++++P + +P+ VGRE S+ + K +Q
Sbjct: 2 DDHKQENEELKIPDVLPLLPVRDVVVYPYMILPLFVGREISINAVDQALSKDRLIFLATQ 61
Query: 55 RDMDVEEPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVK 114
+++ E+P +Y VG VA I+R+L++PDG +VQG + + ++P+ ++
Sbjct: 62 KEIGDEDPTPEGIYPVGTVAMIMRMLKLPDGRVKILVQGLAKGRITSFVESKPYYSVAIE 121
Query: 115 LLPDILPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASA 174
+ + P ++ E EAL+ +++ K++ L P E+++ + + P + ++
Sbjct: 122 RVVEPTPPEDS-LEVEALMRAVKEQLTKIVSLGKPVSP-EVLVIVENMQEPGSLADLVAS 179
Query: 175 NISTSIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQ 234
NI + Q+LLEI +R R+ LL KE ++++++A IQ +EEM K Q+EYFL+
Sbjct: 180 NIGLKVEEAQKLLEIIDPVERLQRVNELLSKEHELLDMQAKIQTAAKEEMGKSQREYFLR 239
Query: 235 QQIKTIQEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQ 293
+Q++ IQ+ELG + E+ ELR K V + K+L +LE++HP++ + +
Sbjct: 240 EQLRAIQQELGETDARSEEIMELRKAIEQAKMPPPVEKEALKQLGRLEQMHPEAAEAGML 299
Query: 294 MQYVQTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPI 353
Y+ ++ LPW ++D ++KRA+++LD DH+ L+K+KERI+E LAV K++ MK PI
Sbjct: 300 RTYLDWMVELPWSTSTRDILDIKRARNILDEDHYYLDKIKERILEFLAVRKLRKKMKGPI 359
Query: 354 ICLYGPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQ 413
+C GPPGVGKTSLGKSIA +LGRK+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ L+
Sbjct: 360 LCFVGPPGVGKTSLGKSIARALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLK 419
Query: 414 RAGTSNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIAT 473
+AG++NPVF+LDE+DK+ +D++GDPSSALLEVLDPEQN+ F D+Y+++ F+LS+V+FIAT
Sbjct: 420 QAGSNNPVFMLDELDKLGADFRGDPSSALLEVLDPEQNHMFSDHYINLPFNLSNVMFIAT 479
Query: 474 ANSLSSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEK 533
AN +I PLLDRME+I++SGY EEK+EIA R+LIP+Q E+G I F+ +
Sbjct: 480 ANQYDTIPGPLLDRMEMINLSGYTEEEKLEIAKRYLIPRQTKENGITGKHISFTDDALRT 539
Query: 534 LIDDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQG 593
+I YTRE+G+R LE++I +V RK+ ++ A ++ P+ + +LG +Y R+
Sbjct: 540 IIAKYTREAGLRNLEREIGSVCRKVARKIAEGEKKLYRITPATVAKYLGPAKYLREVEME 599
Query: 594 NGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSD 653
+ D GVV GLAWT VGGE+LF+E ++ +G+ LTLTG+LGDVMKES AL YIR+ +
Sbjct: 600 HNDVGVVTGLAWTPVGGEVLFVEATIMKGK-GGLTLTGHLGDVMKESVQAALSYIRSKAQ 658
Query: 654 ELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLR 713
EL + ++ +HVHVP GAIPKDGPSAGITM T+LVSALTR VR +AMTGEITLR
Sbjct: 659 ELHLPEDFLAGVDIHVHVPAGAIPKDGPSAGITMATALVSALTRVPVRKDVAMTGEITLR 718
Query: 714 GKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEA 773
GKVLP+GG+KEK+LAA R+GIT I++ E+N KD++E+ LK + I++VLK A
Sbjct: 719 GKVLPIGGLKEKMLAAIRAGITTIVIPEQNVKDLDEVPKPILKKVTVVSAKVIDDVLKVA 778
Query: 774 L 774
L
Sbjct: 779 L 779
>gi|125972606|ref|YP_001036516.1| ATP-dependent protease La [Clostridium thermocellum ATCC 27405]
gi|125712831|gb|ABN51323.1| ATP-dependent protease La [Clostridium thermocellum ATCC 27405]
Length = 815
Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats.
Identities = 358/773 (46%), Positives = 517/773 (66%), Gaps = 3/773 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
++ +P+L LR + +FP + + VGR KS+K + V+Q+D + P D
Sbjct: 10 KQVLPLLPLRGLTVFPYMILHFDVGRIKSIKALEEAMINNQLIFLVAQKDAKNDSPGPED 69
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
+Y +G ++++ ++L++P T +V+G R + E T TEPF V+ + KN
Sbjct: 70 IYTIGTISKVKQLLKLPGDTIRVLVEGISRAEICEFTQTEPFFMAEVEEKIYVEEDKNSK 129
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E EAL + + +L + P E +LS+ +P + +AN+ + KQE+
Sbjct: 130 TEIEALKRRVLSTFEEYSKLNNKVSP-ETVLSIMNIDDPDQLADIITANLMLKVEQKQEI 188
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
L K K R +LL L +E+++M+++ I +K R+++DK QKEY+L++Q+K IQ ELG
Sbjct: 189 LNEFKTKIRLQKLLETLVREIEIMQIEREINIKVRKQIDKTQKEYYLREQLKAIQSELGD 248
Query: 247 NINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
+ EV+E + K A + EV + KEL +L ++ P S + SV Y+ I LPW
Sbjct: 249 KDGVVGEVEEYKRKLAEGNFGEEVEKKVLKELDRLLKMPPGSAEGSVIRTYLDWIFDLPW 308
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
+++ +L RAQ +LD DH+GLEKVKERIIE+LA+ K+K D+K PI+CL GPPGVGKT
Sbjct: 309 NKKTEEIIDLDRAQQILDEDHYGLEKVKERIIEYLAIRKLKKDLKGPILCLAGPPGVGKT 368
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
S+ KSIA +L R YVR+SLGG+ DEAEIRGHRRTY+GAM GRII +L++AG+ NP+ +LD
Sbjct: 369 SIAKSIARALNRNYVRMSLGGVRDEAEIRGHRRTYVGAMPGRIISALKQAGSKNPLILLD 428
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ SD++GDP++A+LEVLD EQN AF D+YL++ FDLS VLFI TAN+L ++ RPLL
Sbjct: 429 EIDKMSSDFRGDPAAAMLEVLDSEQNYAFRDHYLELPFDLSDVLFITTANNLDTVPRPLL 488
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I +S Y EEKV+IA ++L PKQ+ HGF+K+++K + + ++I+ YTRE+GVR
Sbjct: 489 DRMEVISLSSYTEEEKVQIAMKYLFPKQIEAHGFKKSNLKIDEPAVREIINCYTREAGVR 548
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE+QIA V RK+ ++ ++ T K+ + + +LG +Y D + GV GLAW
Sbjct: 549 ELERQIAGVCRKVARKLVSSNQKTVKITAASIEKYLGTKKYRYDMANEKDEVGVATGLAW 608
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG+ L IE +L G+ L LTG LGDVMKESA A+ YIR+ ++ GI ++ +N +
Sbjct: 609 TPVGGDTLSIEVTLMEGK-GSLELTGQLGDVMKESARAAMSYIRSRAEYYGIDKDFYNKY 667
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGAIPKDGPSAGIT+ T++VSALT + VR +AMTGEITLRG+VLP+GG+KEK
Sbjct: 668 DIHIHVPEGAIPKDGPSAGITLATAMVSALTGKPVRKNVAMTGEITLRGRVLPIGGVKEK 727
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
+LAA R+GI II+ EN+KD+EEI + K +KF N+ VL AL++ K
Sbjct: 728 VLAAHRAGIDTIIIPVENKKDLEEIPENVRKTIKFVLADNMETVLNTALVKTK 780
>gi|147677142|ref|YP_001211357.1| ATP-dependent Lon protease [Pelotomaculum thermopropionicum SI]
gi|146273239|dbj|BAF58988.1| ATP-dependent Lon protease [Pelotomaculum thermopropionicum SI]
Length = 805
Score = 652 bits (1681), Expect = 0.0, Method: Composition-based stats.
Identities = 353/770 (45%), Positives = 521/770 (67%), Gaps = 6/770 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR +++FP + + + VGREKS+ I + +Q++ ++P D+Y
Sbjct: 8 LPLLPLRGILVFPYMVIHLDVGREKSVLAIEETMIRDRVIFLATQKEAQTDDPGEDDIYQ 67
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G VAE+ ++L++P GT +V+G R ++ + EPF + V+ + K+ E
Sbjct: 68 IGTVAEVKQLLKLPGGTIRVLVEGIARARVRRFISMEPFFRVEVEQYYEDF---QKNSEI 124
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL+ ++ + ++L PP E ++S+ + P + +++++ I KQ +LE
Sbjct: 125 EALMRSLVYQFEQYVKLSKRIPP-ETVVSVVNLEEPGRLADIIASHLALRIEDKQSILES 183
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+ R +L ++ +EL+++EL+ I ++ R++M+K QKEY+L++Q+K IQ ELG
Sbjct: 184 VNIIGRLEKLCAIVARELEIVELERKINIRVRKQMEKTQKEYYLREQMKAIQRELGEKDE 243
Query: 250 DI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
+ E +ELR K A +K +V E KE+ +LE++ P + + +V Y+ ++SLPW
Sbjct: 244 RMAEGEELREKIAEVKLPKDVEEKALKEVERLEKMPPMAAEAAVVRNYLDWLLSLPWNKS 303
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D ++K A+++L+ DH+GL+ VKERI+E+LA+ K+ MK PIIC GPPGVGKTSLG
Sbjct: 304 TRDRLDIKAAEAILEEDHYGLKTVKERILEYLAIRKLAKKMKGPIICFVGPPGVGKTSLG 363
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA +L RK+VR+SLGG+ DEAEIRGHRRTY+GA+ GRIIQ +++AG+ NPVF+LDEID
Sbjct: 364 RSIARALERKFVRMSLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGSKNPVFLLDEID 423
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ D++GDPS+ALLEVLDPEQN+ F D+Y+++ FDLS+V+FI TAN +I RPL DRM
Sbjct: 424 KMSMDFRGDPSAALLEVLDPEQNSNFSDHYIEVPFDLSNVMFITTANLQHNIPRPLQDRM 483
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I +SGY EEKV+IA RHL+PKQ+ EHG + +K S+ TI K+I +YTRESGVR LE
Sbjct: 484 EIIYISGYTEEEKVQIAMRHLLPKQIKEHGLSNDMLKISENTIRKIIREYTRESGVRNLE 543
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
+QIA + RK K ++ V +L FLG PR+ + + GV GLAWT V
Sbjct: 544 RQIATICRKTAKLVVSDKARKIHVTAQNLNQFLGTPRFRYGVAELDDQVGVATGLAWTEV 603
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GG+ L IE ++++G +LTLTG LG+VMKESA YIR + EL I E F+ +H
Sbjct: 604 GGDTLAIEVTIYKG-SGRLTLTGKLGEVMKESAQAGYSYIRGRAAELAIDGEFFDKQDIH 662
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+H+PEGA PKDGPSAGITM +L SA+T RKVR +AMTGEITLRG+VLPVGG+KEK+LA
Sbjct: 663 IHIPEGATPKDGPSAGITMACALASAITGRKVRHDVAMTGEITLRGRVLPVGGVKEKVLA 722
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
A R+GI +IL ++N+KD++EI L F V ++++VL+ ALLE++
Sbjct: 723 AHRAGIKTVILPKDNKKDLDEIPKKVKDKLNFILVDHMDQVLEAALLEKE 772
>gi|86158132|ref|YP_464917.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774643|gb|ABC81480.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-C]
Length = 843
Score = 652 bits (1681), Expect = 0.0, Method: Composition-based stats.
Identities = 362/785 (46%), Positives = 524/785 (66%), Gaps = 12/785 (1%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ ++ + +PIL LRN + FPG +P+ VGR+K++ LI+ + G V+QR + E
Sbjct: 33 INKEDIPAVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDEQVIGVVTQRRAEEE 92
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
+P ADLY VG VA ++++L+M + + +VQG RF + E+ P++K R++ + D
Sbjct: 93 DPGAADLYTVGTVARVVKLLKMGEDNYSLVVQGLARFKVLELVQESPYLKARIEAVED-- 150
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPP--RELILSMRRNKNPMYQINFASANIST 178
D E EAL ++ ++ +++ELM E P EL+ S+ +P + + +AN+
Sbjct: 151 RSVVDDVEVEALAINLKKLAREVIELMPELPAAATELVESI---THPGHLADLIAANVDV 207
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
I KQ++LE ++K R +L LL+++ ++++L I + EM K Q+EY+L+QQ+K
Sbjct: 208 PIEEKQQVLETVELKARMKLVLELLNRKREILKLSNKIDSAVKGEMSKTQREYYLRQQLK 267
Query: 239 TIQEELGGNINDIEVQELRTKAATMK-WSSEVAETFEKELRKLERLHPQSPDYSVQMQYV 297
I+EELG + E + + EV + +KEL +L+ + S +Y+V Y+
Sbjct: 268 AIKEELGELGEEEEELDELQERLKKAGLPPEVEKVAQKELNRLKSIPTASSEYTVARTYL 327
Query: 298 QTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLY 357
I LPW + DN +++ A+ +LD DH+GL+K+K+RI+E+LAV K+K DM+ PI+C
Sbjct: 328 DWIADLPWTKRTDDNLDIENARQILDTDHYGLDKIKKRILEYLAVRKLKNDMRGPILCFV 387
Query: 358 GPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGT 417
GPPGVGKTSLG+SIA + GRK+VR+SLGG+ DEAEIRGHRRTY+GA+ GRIIQS+++A T
Sbjct: 388 GPPGVGKTSLGQSIARATGRKFVRLSLGGVRDEAEIRGHRRTYVGALPGRIIQSMKKAAT 447
Query: 418 SNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSL 477
NPV +LDEIDK+ +D++GDPS+ALLEVLDPEQN+AF D+YLD+ +DLS V+FI TAN L
Sbjct: 448 VNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNHAFSDHYLDLSYDLSKVMFIGTANLL 507
Query: 478 SSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDD 537
I PL DRME++++ GY EEKV IA HLIPKQL EHG + I S+K + K+I
Sbjct: 508 DPIPGPLKDRMEILELPGYTFEEKVHIAQNHLIPKQLREHGLSADAIAISEKALIKIIMA 567
Query: 538 YTRESGVRTLEKQIAAVIRKITKEAATNVVHTT---KVEPSDLVTFLGAPRYTRDRYQGN 594
YTRE+GVR LE++IA V R I E A+ + + +E +D++ LG ++ + +
Sbjct: 568 YTREAGVRNLERRIADVCRAIAVEVASGKIGASAKRSIEEADVLEILGPEKFYNETAERT 627
Query: 595 GDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDE 654
AGV GLAWT+ GG+ILFIE + G+ LTLTG LGDVMKESA AL Y+R+ SD
Sbjct: 628 EIAGVATGLAWTAAGGDILFIEATKMPGKG-ALTLTGQLGDVMKESAQAALSYLRSKSDS 686
Query: 655 LGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRG 714
LGI +H+H P GAIPKDGPSAG+T++T+LVS LT +VR+ +AMTGE+TLRG
Sbjct: 687 LGIPVNFLEKTDLHIHFPAGAIPKDGPSAGVTILTALVSLLTGIRVRSDVAMTGEVTLRG 746
Query: 715 KVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
VLPVGGIKEK+LAA R+GI II+ N KD+ ++ + K L+F + ++++EVL+ AL
Sbjct: 747 LVLPVGGIKEKVLAAHRAGIKRIIIPARNEKDLLDVPEQARKELEFVFAAHMDEVLQAAL 806
Query: 775 LEEKV 779
E V
Sbjct: 807 EENPV 811
>gi|51891499|ref|YP_074190.1| Lon protease [Symbiobacterium thermophilum IAM 14863]
gi|51855188|dbj|BAD39346.1| Lon protease [Symbiobacterium thermophilum IAM 14863]
Length = 803
Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats.
Identities = 353/765 (46%), Positives = 515/765 (67%), Gaps = 6/765 (0%)
Query: 16 RNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYDVGVVAE 75
+ I+FP + +P+ VGREKS++ + +G Q+D E P D+Y VG + E
Sbjct: 18 KGQIVFPTMIVPLEVGREKSMRAVEAAMNEGRRMVLAMQKDAKNEMPTPDDIYLVGTIVE 77
Query: 76 IIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEFEALVST 135
I +V+++P GT + +G R + + EP+M+ V +P+ + E EAL+
Sbjct: 78 IKQVVKVPGGTLKVVFEGVARARIDHYVSEEPYMRAAVAQVPE---PTTRSAEAEALMRM 134
Query: 136 IQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEISKMKDR 195
+ + ++ + PP L+ +++ + A+ + + KQ +LE + +R
Sbjct: 135 VISQYERYVKSAKKVPPESLVTAVQVEEPGRLADTIAAYMTNLDMKDKQAVLEAFDVVER 194
Query: 196 GYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN-DIEVQ 254
R+ +L +E++V++L+ I ++ R++M+K Q+EY+L++QIK IQ+ELG + E +
Sbjct: 195 LERISDILSREMEVLDLERKINVRVRKQMEKTQREYYLREQIKAIQKELGERDDRGTEAE 254
Query: 255 ELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFSKDNFN 314
+ R K + EV E +E+ + E++ P + + V Y++ + SLPW F++D +
Sbjct: 255 QFREKIEKLGMPDEVKEKALREVDRFEKMPPMAAEAVVVRNYLEWLTSLPWSTFTEDQDD 314
Query: 315 LKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGKSIAES 374
LKRA+ +L+ +H+GL+K K+RI+E+LAV K+ MK PI+CL GPPGVGKTSL KS+A +
Sbjct: 315 LKRAEEILESEHYGLKKPKDRILEYLAVRKLVKKMKGPILCLAGPPGVGKTSLAKSVAHA 374
Query: 375 LGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDKIDSDY 434
LGRK+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ +++AG+ NPVF+LDEIDK+ SD+
Sbjct: 375 LGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGSRNPVFLLDEIDKMSSDF 434
Query: 435 KGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRMELIDVS 494
+GDP+SALLEVLDPEQN++F D+Y+++ FDLS VLFI TAN + +I RPLLDRMELI +S
Sbjct: 435 RGDPASALLEVLDPEQNHSFSDHYIEVPFDLSDVLFITTANVVWNIPRPLLDRMELITIS 494
Query: 495 GYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEKQIAAV 554
GY +EKVEIA RHL+PKQ +HG + +++ S+ I ++ +YTRE+GVR LE+Q+AA+
Sbjct: 495 GYTEDEKVEIAKRHLLPKQRKDHGLSEENLEVSENVIRTIVREYTREAGVRNLERQLAAL 554
Query: 555 IRKITKEAAT-NVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSVGGEIL 613
RK +E AT + V T +V +L TFLGAPRY + GV G+ +T GG+IL
Sbjct: 555 CRKAAREIATHDGVQTVRVTTQNLHTFLGAPRYQWGKKLKEDQVGVATGMVYTETGGDIL 614
Query: 614 FIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVHVHVPE 673
IE SL +G+ L LTG LG+VMKESA L YIR+ + +LG+ ++ +H+HVPE
Sbjct: 615 PIEVSLMKGKG-SLILTGKLGEVMKESAQAGLSYIRSRARDLGLEEDFHAKHDIHIHVPE 673
Query: 674 GAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILAAKRSG 733
GA+PK+GPSAGI M T++VSALT R VRA +AMTGEITLRG+VLP+GG+KEK+L A R+G
Sbjct: 674 GAVPKEGPSAGIAMATAVVSALTNRPVRADLAMTGEITLRGRVLPIGGVKEKLLGAHRAG 733
Query: 734 ITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
IT IIL EN KD+EEI K L H V +++EVL+ ALLE +
Sbjct: 734 ITHIILPRENEKDLEEIPGNVRKKLHVHLVDHMDEVLRLALLEPR 778
>gi|94266501|ref|ZP_01290191.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
gi|93452888|gb|EAT03402.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
Length = 827
Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats.
Identities = 355/789 (44%), Positives = 513/789 (65%), Gaps = 28/789 (3%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE------ 61
EE+P+L L + FPG+ P+ + S++L+ V+ R + EE
Sbjct: 39 EELPVLPLHGFVFFPGMGFPMQIRHPSSMQLVDEAILHDRLVAVVTHRQLQEEETAKEQE 98
Query: 62 ----------------PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITAT 105
P +LY GVV I ++++ DG ++ ++ + E T
Sbjct: 99 SGDNDPQALLDPGGLPPSPDNLYGAGVVGYIHKLVKSEDGAYQVLISAVKKLRIVEYTQR 158
Query: 106 EPFMKGRVKLLPDILPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNP 165
P++K RV+++P + D E EA++ I+ KM EL P EL++++ NP
Sbjct: 159 RPYLKARVEVVP---MAEEHDQEIEAMLLNIRTQFKKMAEL--GGTPEELVMTVNALTNP 213
Query: 166 MYQINFASANISTSIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMD 225
Y + + ++E+LEI +K+ R+ + L+K+L+ +E+ IQ +++MD
Sbjct: 214 FYVAYLVLSQTGLGLEQEEEILEIVDLKELLNRVGHELNKKLETVEMSHKIQKGIKQDMD 273
Query: 226 KQQKEYFLQQQIKTIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHP 285
K+Q+E+FL++Q+K I++ELG + +++++ELR + K E ++ EKEL +L R+ P
Sbjct: 274 KRQREFFLREQLKAIKKELGEDDENLDLKELRGRLEEAKLPEEARKSAEKELDRLGRISP 333
Query: 286 QSPDYSVQMQYVQTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKM 345
SP+Y+V Y+ I+ LPW + ++D+ +L+RA+ VLD DH+GL+K+K+RIIE LAV K+
Sbjct: 334 SSPEYTVSRTYLDWILDLPWLIATEDHLDLERARRVLDEDHYGLDKIKKRIIEFLAVRKL 393
Query: 346 KGDMKSPIICLYGPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMC 405
K DM+ PI+C GPPGVGKTSLG+SIA S+GR +VRISLGG+ DEAEIRGHRRTYIGA+
Sbjct: 394 KQDMRGPILCFVGPPGVGKTSLGQSIARSMGRNFVRISLGGVRDEAEIRGHRRTYIGALP 453
Query: 406 GRIIQSLQRAGTSNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDL 465
GRIIQSL++AG NP+F+LDE+DK+ D++GDPSSALLEVLDPEQN +F D+YL+I FDL
Sbjct: 454 GRIIQSLRKAGAHNPLFMLDEVDKLGMDFRGDPSSALLEVLDPEQNFSFSDHYLEIAFDL 513
Query: 466 SHVLFIATANSLSSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIK 525
S V+FI TAN L +I PL DRME+I+++GY +EK+ IA RHL+PKQL + +D++
Sbjct: 514 SKVMFITTANLLDNIPGPLKDRMEVIELTGYTEDEKLHIARRHLLPKQLEANALSADDLQ 573
Query: 526 FSKKTIEKLIDDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPR 585
+ + +I YTRE+GVR LE++I V R + ++ +V P DL +LG +
Sbjct: 574 INDDGLRGIIRSYTREAGVRNLEREIGGVCRGVARQIVEGHSGRLEVGPDDLAQYLGPLK 633
Query: 586 YTRDRYQGNGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIAL 645
+ + G+ GLAWT VGG++LFIET+ +G+ +LTLTG LG+VMKESA AL
Sbjct: 634 FFAETKARTWGPGLATGLAWTPVGGDLLFIETARMQGKG-ELTLTGKLGEVMKESATAAL 692
Query: 646 DYIRAHSDELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIA 705
YIR+H+ ELGI +E+F HVHVPEGAIPKDGPSAG+ MV SLVS LT R V +A
Sbjct: 693 TYIRSHAKELGIDEELFAKSDFHVHVPEGAIPKDGPSAGVAMVVSLVSQLTGRAVSREVA 752
Query: 706 MTGEITLRGKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSN 765
MTGEITLRG VLPVGG+KEK++AA R+GI +IL N KD++E+ + L+ H V++
Sbjct: 753 MTGEITLRGDVLPVGGVKEKVVAAVRAGIPRVILPRLNDKDLDELPAGTREQLEVHLVND 812
Query: 766 INEVLKEAL 774
INE L+ AL
Sbjct: 813 INEALEVAL 821
>gi|120602910|ref|YP_967310.1| ATP-dependent protease La [Desulfovibrio vulgaris subsp. vulgaris
DP4]
gi|120563139|gb|ABM28883.1| ATP-dependent protease La [Desulfovibrio vulgaris subsp. vulgaris
DP4]
Length = 856
Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats.
Identities = 350/768 (45%), Positives = 503/768 (65%), Gaps = 4/768 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+E+P+L +R++++F + +P+ VGREKS++ + Y +Q D V++P DL
Sbjct: 89 QELPVLPVRDVVVFNYMILPLFVGREKSVQAVDAALNGSRYLMVCTQHDEQVDDPTPDDL 148
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
+ G V I+R+L+MPDG +VQG R + T+ EP + RV +P++ G
Sbjct: 149 HHTGTVVMIMRMLKMPDGRIKVLVQGVTRAHVDAFTSEEPHISARVTPMPEVDSGP-LTV 207
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EA++ T ++ S K++ L E++ + P + +AN+ ++ Q++L
Sbjct: 208 EQEAMMRTAREQSEKILSLR-GISTSEIMSVLNSVDEPGRLADLIAANLRMKVSDAQDIL 266
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
E R + L KE +V ++A IQ RE MDK QK+YFL++Q+K I+ ELG +
Sbjct: 267 ECVDPVARLELVNKQLMKEAEVASMQAKIQSMAREGMDKAQKDYFLREQLKAIRRELGES 326
Query: 248 IN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
N D E++EL K +V + +K+LR+L +HP S + +V Y++ + LPW
Sbjct: 327 GNEDEELEELARALDIAKLPRDVRKEADKQLRRLAAMHPDSSEATVTRTYLEWLSELPWR 386
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
S+D ++++A+ +LD DHFGL+KVK+RI+E+L+V K+ D K PI+C GPPGVGKTS
Sbjct: 387 KLSRDRLDIRKAKVILDEDHFGLDKVKDRILEYLSVRKLNPDSKGPILCFAGPPGVGKTS 446
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+SIA +LGRK+ RISLGG+ DEAEIRGHRRTYIG+M GRIIQSL++ GT NPV +LDE
Sbjct: 447 LGRSIARTLGRKFQRISLGGMRDEAEIRGHRRTYIGSMPGRIIQSLKQCGTRNPVIMLDE 506
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDKI +D++GDPSSALLEVLDPEQN +F D+YL++ FDLS V+FI TAN L +I PL D
Sbjct: 507 IDKIGADFRGDPSSALLEVLDPEQNWSFSDHYLNVPFDLSKVMFICTANQLDTIPAPLRD 566
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I + GY ++EKV IA RHL+P+Q +G +N+I IE L+ YTRE+G+R
Sbjct: 567 RMEIISIPGYTMQEKVAIARRHLVPRQATSNGLGENEITIGDAAIETLVRGYTREAGLRN 626
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE++I +V RK+ + A +V P+ LGAPR+ D ++ GV +GLAWT
Sbjct: 627 LEREIGSVCRKLARRKAEGAKGPFRVTPALTQKLLGAPRFLEDEHEKELLPGVALGLAWT 686
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
GGE+L +E S +G+ KL LTG LGDVMKESA A+ Y R+ ++EL I +
Sbjct: 687 PYGGEVLNVEVSPLKGK-GKLILTGQLGDVMKESAQAAVSYARSRAEELDIDPGFAEDRD 745
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+HVP GA PKDGPSAG+T+VT+L+SALT R VR+ + MTGEITLRG+VLPVGGIKEKI
Sbjct: 746 LHIHVPAGATPKDGPSAGVTLVTALISALTGRPVRSDLCMTGEITLRGRVLPVGGIKEKI 805
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
LA G+ +++ +N KD+E++ L+ ++ H S+I++VL A
Sbjct: 806 LAGVARGLKHVVIPAQNAKDLEDVPADLLRRIEVHLASHIDDVLPVAF 853
>gi|121540675|ref|ZP_01672435.1| Endopeptidase La [Candidatus Desulfococcus oleovorans Hxd3]
gi|121519469|gb|EAX56317.1| Endopeptidase La [Candidatus Desulfococcus oleovorans Hxd3]
Length = 817
Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats.
Identities = 347/773 (44%), Positives = 515/773 (66%), Gaps = 7/773 (0%)
Query: 4 DHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE-EP 62
D + E +PI+ L + +LFP + +P+++ + + + LI V ++ + + + +
Sbjct: 16 DKLPETVPIMPLSDGVLFPKMIIPVVITQNEYMTLIDEVMSGNRLVALITPKSGERKSDY 75
Query: 63 DRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPG 122
DL +G +A I+++ + + ++QG R + T+P+++ I
Sbjct: 76 GPGDLSPIGTLALILKMAKPDESRIHLMLQGISRIRTKNFIKTDPYLEAA---FAQITEN 132
Query: 123 KNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAV 182
+ KD E E L+S I ++ +++ + P EL P + ++ I++S
Sbjct: 133 EKKDKETEGLMSNISNVYQELVRIS-PAIPNELGAMAVTIDEPGSLADMVASTINSSTEE 191
Query: 183 KQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQE 242
KQ +LE +K R ++ L+ +L++++L IQ + +E+MDKQQKE++L++Q+K I+E
Sbjct: 192 KQNILETLDVKLRLKKVTRQLNHQLEILKLGDKIQSQIKEDMDKQQKEFYLRKQLKAIRE 251
Query: 243 ELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
ELG ++E +E RTK E + +EL + R+HP S +Y+V Y+ +
Sbjct: 252 ELGEKEEGNVEAEEYRTKIEEGNLPEEAYKAATRELERFSRMHPSSSEYTVSSTYLDWLT 311
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
+LPW ++D+ ++K+A+++LD+DHFGLEK K+RI+E+LAV K+ D K PI+C GPPG
Sbjct: 312 TLPWDKQTEDHLDIKKARAILDKDHFGLEKPKKRILEYLAVRKLNPDSKGPILCFLGPPG 371
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
GKTSLG+SIA +LGR+++RISLGG+ DEAEIRGHRRTY+GA+ GRIIQ +++AGT+NPV
Sbjct: 372 TGKTSLGRSIARALGREFIRISLGGVRDEAEIRGHRRTYVGALPGRIIQEIRKAGTNNPV 431
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
F+LDEIDK+ +D+KGDPSSALLEVLDPEQN +F D+YLD+ FDLS V+F+ATAN + +I
Sbjct: 432 FMLDEIDKVGADFKGDPSSALLEVLDPEQNFSFADHYLDVSFDLSRVMFVATANVIDTIP 491
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
L DRME+I + GY +EEKV+IA ++LIP+Q E+G I FS+ I +I DYTRE
Sbjct: 492 PALRDRMEVIGLRGYTLEEKVKIARQYLIPRQRKENGLAAKHISFSQSAIRHIISDYTRE 551
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+G+R E++IA+V R + + A + ++P DL +LG R+T + + GVV+
Sbjct: 552 AGLRNAEREIASVCRGVAAKIAEGKKVSGAIKPEDLYEYLGPVRFTSETGENALTPGVVM 611
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLAWT VGGEILFIE + +G+ LTLTG LGDVMKESA AL +IRAH+ + I ++
Sbjct: 612 GLAWTPVGGEILFIEATSMKGKR-GLTLTGQLGDVMKESATAALSFIRAHARDYDIDEDF 670
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F+ + H+HVP GAIPKDGPSAG+TM+T+LVS LT RKV+ G+AMTGEITLRGKV+PVGG
Sbjct: 671 FDKYDFHIHVPSGAIPKDGPSAGVTMLTALVSLLTGRKVKKGLAMTGEITLRGKVMPVGG 730
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
IKEK++AA R+GI E+IL N+KD+EEI +KFH+ + +VL+ AL
Sbjct: 731 IKEKVIAAHRAGIKEVILPRPNKKDLEEIPAKVKSAMKFHFAEKMGDVLELAL 783
>gi|46579602|ref|YP_010410.1| ATP-dependent protease La, putative [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|46449017|gb|AAS95669.1| ATP-dependent protease La, putative [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
Length = 856
Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats.
Identities = 350/768 (45%), Positives = 503/768 (65%), Gaps = 4/768 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+E+P+L +R++++F + +P+ VGREKS++ + Y +Q D V++P DL
Sbjct: 89 QELPVLPVRDVVVFNYMILPLFVGREKSVQAVDAALNGSRYLMVCTQHDEQVDDPTPDDL 148
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
+ G V I+R+L+MPDG +VQG R + T+ EP + RV +P++ G
Sbjct: 149 HHTGTVVMIMRMLKMPDGRIKVLVQGVTRAHVDAFTSEEPHISARVTPMPEVDSGP-LTV 207
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EA++ T ++ S K++ L E++ + P + +AN+ ++ Q++L
Sbjct: 208 EQEAMMRTAREQSEKILSLR-GISTSEIMSVLNSVDEPGRLADLIAANLRMKVSDAQDIL 266
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
E R + L KE +V ++A IQ RE MDK QK+YFL++Q+K I+ ELG +
Sbjct: 267 ECVDPVARLELVNKQLMKEAEVASMQAKIQSMAREGMDKAQKDYFLREQLKAIRRELGES 326
Query: 248 IN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
N D E++EL K +V + +K+LR+L +HP S + +V Y++ + LPW
Sbjct: 327 GNEDEELEELARALDIAKLPRDVRKEADKQLRRLAAMHPDSSEATVTRTYLEWLSELPWR 386
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
S+D ++++A+ +LD DHFGL+KVK+RI+E+L+V K+ D K PI+C GPPGVGKTS
Sbjct: 387 KLSRDRLDIRKAKVILDEDHFGLDKVKDRILEYLSVRKLNPDSKGPILCFAGPPGVGKTS 446
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+SIA +LGRK+ RISLGG+ DEAEIRGHRRTYIG+M GRIIQSL++ GT NPV +LDE
Sbjct: 447 LGRSIARTLGRKFQRISLGGMRDEAEIRGHRRTYIGSMPGRIIQSLKQCGTRNPVIMLDE 506
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDKI +D++GDPSSALLEVLDPEQN +F D+YL++ FDLS V+FI TAN L +I PL D
Sbjct: 507 IDKIGADFRGDPSSALLEVLDPEQNWSFSDHYLNVPFDLSKVMFICTANQLDTIPAPLRD 566
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I + GY ++EKV IA RHL+P+Q +G +N+I IE L+ YTRE+G+R
Sbjct: 567 RMEIISIPGYTMQEKVAIARRHLVPRQATSNGLGENEITIGDAAIETLVRGYTREAGLRN 626
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE++I +V RK+ + A +V P+ LGAPR+ D ++ GV +GLAWT
Sbjct: 627 LEREIGSVCRKLARRKAEGSKGPFRVTPALTQKLLGAPRFLEDEHEKELLPGVALGLAWT 686
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
GGE+L +E S +G+ KL LTG LGDVMKESA A+ Y R+ ++EL I +
Sbjct: 687 PYGGEVLNVEVSPLKGK-GKLILTGQLGDVMKESAQAAVSYARSRAEELDIDPGFAEDRD 745
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+HVP GA PKDGPSAG+T+VT+L+SALT R VR+ + MTGEITLRG+VLPVGGIKEKI
Sbjct: 746 LHIHVPAGATPKDGPSAGVTLVTALISALTGRPVRSDLCMTGEITLRGRVLPVGGIKEKI 805
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
LA G+ +++ +N KD+E++ L+ ++ H S+I++VL A
Sbjct: 806 LAGVARGLKHVVIPAQNAKDLEDVPADLLRRIEVHLASHIDDVLPVAF 853
>gi|118744367|ref|ZP_01592361.1| ATP-dependent protease La [Geobacter lovleyi SZ]
gi|118682744|gb|EAV89149.1| ATP-dependent protease La [Geobacter lovleyi SZ]
Length = 816
Score = 649 bits (1673), Expect = 0.0, Method: Composition-based stats.
Identities = 354/773 (45%), Positives = 516/773 (66%), Gaps = 4/773 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E + E +P+L +R+++++P + +P+ VGRE S+K + +Q D+ E+
Sbjct: 19 EELRIPELLPLLPIRDVVVYPFMIIPLFVGREMSIKAVDQALAGDRMIMLATQHDIGDED 78
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P +Y+VG VA I+R+L++PDG +VQG + + E +PF R++ L + P
Sbjct: 79 PTPDKIYNVGTVAMIMRMLKLPDGRVKILVQGLVKARIAEFVEFKPFHTVRIERL--VEP 136
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+ E EAL+ T+++ K+ EL + P E+++ + +P + ++N+ ++
Sbjct: 137 VAVDNLETEALMRTVREQLAKIAELGKQISP-EVMVILENITDPGSMADLIASNLGLKLS 195
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
Q LLEI R ++ LL +E +++ ++A IQ REEM K QKEY+L++Q+K IQ
Sbjct: 196 EAQMLLEIEDPVRRLTKVNDLLAREHEMLSVQAQIQNAAREEMGKNQKEYYLREQMKAIQ 255
Query: 242 EELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
+ELG + E++ELR T + V + K+L +LER+H S + V Y+ +I
Sbjct: 256 QELGDHDGKEELEELRKAIETARMPENVEKEALKQLGRLERMHGDSGEAGVIRTYLDWLI 315
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
+PW ++D+ ++ RA+ +LD DH L+KVKERI+E LAV K+ MK PI+C GPPG
Sbjct: 316 EIPWSKTTRDSLDIIRAKKILDEDHSYLDKVKERILEFLAVRKLNKQMKGPILCFVGPPG 375
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLGKSIA +L RK+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ +++AGT NPV
Sbjct: 376 VGKTSLGKSIARALNRKFVRISLGGVRDEAEIRGHRRTYLGALPGRIIQGMKQAGTRNPV 435
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
F+LDE+DK+ DYKGDPS+ALLEVLDP+QNNAF D+Y+++ +DLS+VLF+ATAN I
Sbjct: 436 FMLDELDKLGYDYKGDPSAALLEVLDPQQNNAFSDHYVNLPYDLSNVLFVATANHSDPIP 495
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
L DRME+I++ GY EEK+EIA R+L+P+Q+ ++G + I F ++ ++++I YTRE
Sbjct: 496 SALFDRMEVINIPGYTEEEKLEIAIRYLVPRQMKDNGLKAKHIVFEEEALKEIIAKYTRE 555
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+G+R LE++I V RK+ ++ A +V P+ + TFLGA ++ RD + GVV
Sbjct: 556 AGLRNLEREIGNVCRKVARKIAEGHKRQIRVTPAAVATFLGAAKFLRDDEMDKNEVGVVN 615
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLAWTSVGGE+L IE + G+ + LTG LGDVMKES AL YIR+H E I+ +
Sbjct: 616 GLAWTSVGGEVLHIEATTMAGKG-GMALTGQLGDVMKESVQAALAYIRSHGSEFHINPDW 674
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F ++HVHVP GA+PKDGPSAG M T+L+S LT+ V+ +AMTGEI+LRGKVLP+GG
Sbjct: 675 FQENEIHVHVPAGAVPKDGPSAGCAMATALISVLTKVPVKKDVAMTGEISLRGKVLPIGG 734
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
+KEKILAA R+G+ +I+ E+NRKD+E+I K +K V I+EVLK AL
Sbjct: 735 LKEKILAAVRAGMKMVIIPEQNRKDLEDIPKAMQKKVKIVPVKEIDEVLKLAL 787
>gi|94263344|ref|ZP_01287159.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
gi|93456299|gb|EAT06429.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
Length = 827
Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats.
Identities = 354/789 (44%), Positives = 512/789 (64%), Gaps = 28/789 (3%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE------ 61
EE+P+L L + FPG+ P+ + S++L+ V+ R + EE
Sbjct: 39 EELPVLPLHGFVFFPGMGFPMQIRHPSSMQLVDEAILHDRLVAVVTHRQLQEEETAKEQE 98
Query: 62 ----------------PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITAT 105
P +LY GVV I ++++ DG ++ ++ + E T
Sbjct: 99 SGDNDPQALLDPGGLPPSPDNLYGAGVVGYIHKLVKSEDGAYQVLISAVKKLKIVEYTQR 158
Query: 106 EPFMKGRVKLLPDILPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNP 165
P++K RV+++P + D E EA++ I+ KM EL P EL++++ NP
Sbjct: 159 RPYLKARVEVVP---MAEEHDQEIEAMLLNIRTQFKKMAEL--GGTPEELVMTVNALTNP 213
Query: 166 MYQINFASANISTSIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMD 225
Y + + ++E+LEI +K+ R+ + L+K+L+ +E+ IQ +++MD
Sbjct: 214 FYVAYLVLSQTGLGLEQEEEILEIVDLKELLNRVGHELNKKLETVEMSHKIQKGIKQDMD 273
Query: 226 KQQKEYFLQQQIKTIQEELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHP 285
K+Q+E+FL++Q+K I++ELG + +++++ELR + K E ++ EKEL +L R+ P
Sbjct: 274 KRQREFFLREQLKAIKKELGEDDENLDLKELRGRLEEAKLPEEARKSAEKELDRLGRISP 333
Query: 286 QSPDYSVQMQYVQTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKM 345
SP+Y+V Y+ I+ LPW + ++D+ +L+RA+ VLD DH+GL+K+K+RIIE LAV K+
Sbjct: 334 SSPEYTVSRTYLDWILDLPWLIATEDHLDLERARRVLDEDHYGLDKIKKRIIEFLAVRKL 393
Query: 346 KGDMKSPIICLYGPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMC 405
K DM+ PI+C GPPGVGKTSLG+SIA S+GR +VRISLGG+ DEAEIRGHRRTYIGA+
Sbjct: 394 KQDMRGPILCFVGPPGVGKTSLGQSIARSMGRNFVRISLGGVRDEAEIRGHRRTYIGALP 453
Query: 406 GRIIQSLQRAGTSNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDL 465
GRIIQSL++AG NP+F+LDE+DK+ D++GDPSSALLEVLDPEQN +F D+YL+I FDL
Sbjct: 454 GRIIQSLRKAGAHNPLFMLDEVDKLGMDFRGDPSSALLEVLDPEQNFSFSDHYLEIAFDL 513
Query: 466 SHVLFIATANSLSSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIK 525
S V+FI TAN L +I PL DRME+I+++GY +EK+ IA RHL+PKQL + +D++
Sbjct: 514 SKVMFITTANLLDNIPGPLKDRMEVIELTGYTEDEKLHIARRHLLPKQLEANALSADDLQ 573
Query: 526 FSKKTIEKLIDDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPR 585
+ + +I YTRE+GVR LE++I V R + ++ +V P DL +LG +
Sbjct: 574 INDDGLRGIIRSYTREAGVRNLEREIGGVCRGVARQIVEGHSGRLEVGPDDLAQYLGPLK 633
Query: 586 YTRDRYQGNGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIAL 645
+ + G+ GLAWT VGG++LFIET+ +G+ +LTLTG LG+VMKESA AL
Sbjct: 634 FFAETKARTWGPGLATGLAWTPVGGDLLFIETARMQGKG-ELTLTGKLGEVMKESATAAL 692
Query: 646 DYIRAHSDELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIA 705
YIR+H+ ELGI +E+F HVHVPEGAIPKDGP AG+ MV SLVS LT R V +A
Sbjct: 693 TYIRSHAKELGIDEELFAKSDFHVHVPEGAIPKDGPLAGVAMVVSLVSQLTGRAVSREVA 752
Query: 706 MTGEITLRGKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSN 765
MTGEITLRG VLPVGG+KEK++AA R+GI +IL N KD++E+ + L+ H V++
Sbjct: 753 MTGEITLRGDVLPVGGVKEKVVAAVRAGIPRVILPRLNDKDLDELPAGTREQLEVHLVND 812
Query: 766 INEVLKEAL 774
INE L+ AL
Sbjct: 813 INEALEVAL 821
>gi|113940080|ref|ZP_01425922.1| ATP-dependent protease La [Herpetosiphon aurantiacus ATCC 23779]
gi|113898271|gb|EAU17291.1| ATP-dependent protease La [Herpetosiphon aurantiacus ATCC 23779]
Length = 815
Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats.
Identities = 347/786 (44%), Positives = 521/786 (66%), Gaps = 7/786 (0%)
Query: 9 EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLY 68
E+P+L L N +LFP + P+ V RE S+ I AV+QR +++EE D + LY
Sbjct: 18 ELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMSADRQIVAVAQRAIEIEEHDTSQLY 77
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHE 128
VGV+A I RVL++PDGTT+ +VQG+QR + + ATEP++ +V++ I P
Sbjct: 78 QVGVIAHIERVLKLPDGTTSVLVQGQQRVQIVDWLATEPYINAQVQI---IEPDHESSLA 134
Query: 129 FEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLE 188
EA++ + K+++L P + ++ ++ + ++ + I +Q+LLE
Sbjct: 135 IEAMMRGVLASYEKVVKLSRTMPDDAYVAALNL-EDASALADLIASTLPLDIVRRQQLLE 193
Query: 189 ISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG-N 247
+ ++++R RL +L +E+ V+EL+ IQ + ++E+DK Q+++FL++Q+K IQ ELG +
Sbjct: 194 LFEVEERLRRLSVVLSQEIDVLELEHHIQNQVQKEVDKSQRDFFLREQLKAIQTELGQED 253
Query: 248 INDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
E+ EL + ++ +EL +LE + P +P+YSV Y+ ++ LPW
Sbjct: 254 PLTRELNELHDRIVAANLPAKAQAKALEELGRLEMMPPAAPEYSVIRTYLDWLLELPWSK 313
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGD-MKSPIICLYGPPGVGKTS 366
S D +L+ A VL+ +H+GL+KVKERI+E +AV + GD KSPI+C GPPGVGKTS
Sbjct: 314 TSADVADLEVAAKVLENNHYGLKKVKERILEFIAVRMLAGDSTKSPILCFVGPPGVGKTS 373
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+S+AE+LGR++VR+SLGG+HDEAEIRGHRRTYIGAM GRIIQ+++ AGT NPVF+LDE
Sbjct: 374 LGRSVAEALGREFVRLSLGGVHDEAEIRGHRRTYIGAMPGRIIQTMKDAGTINPVFMLDE 433
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ +D++GDP++ALLEVLDPEQNN F D+YLD+ +DLS ++FI TAN L I PLLD
Sbjct: 434 IDKLGNDFRGDPAAALLEVLDPEQNNTFADHYLDLPYDLSKIMFITTANMLDPIDEPLLD 493
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME++++ GYI EEKV+IA + LIPKQ+ +G +++ I S + + ++I YT E+GVR
Sbjct: 494 RMEIVELPGYIEEEKVQIARKFLIPKQIEANGLKQHPITISDEALRQIIRTYTWEAGVRN 553
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE++I + RKI + A + ++ P+ L FLG P + R + GV G+ W+
Sbjct: 554 LEREIGGICRKIARRVAEKKRYPRRITPTMLTDFLGQPPFDYSRANDRDEIGVATGMVWS 613
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
S GG+++ IET++ G+ TLTG LGDVM+ESA AL Y RA S LGI + F
Sbjct: 614 SNGGDVVAIETAIVDGKGTT-TLTGQLGDVMQESAQAALSYARASSRRLGIDGKRFEKID 672
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+HVPEG +PKDGPSAGIT+ S++SALT R +R +AMTGEITLRG+VLP+GG+++KI
Sbjct: 673 IHIHVPEGGVPKDGPSAGITLACSVISALTHRPLRRDVAMTGEITLRGRVLPIGGLRDKI 732
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDIY 786
L A R+GIT +++ ++N +D+EE+ + + + V +++EVL A + + +
Sbjct: 733 LGAYRAGITTMLIPKKNLRDLEEVPNNVRRQITVVAVEHMDEVLPIAFVSNPLERGSQHT 792
Query: 787 SFGKKT 792
S G +T
Sbjct: 793 SDGDQT 798
>gi|78357487|ref|YP_388936.1| ATP-dependent protease La [Desulfovibrio desulfuricans G20]
gi|78219892|gb|ABB39241.1| ATP-dependent protease La [Desulfovibrio desulfuricans G20]
Length = 809
Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats.
Identities = 348/779 (44%), Positives = 513/779 (65%), Gaps = 11/779 (1%)
Query: 4 DHMQE-------EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRD 56
+HM E E+P+LA+R++++F + +P+ VGREKS++ + Y +Q D
Sbjct: 29 EHMNELLNDFPAELPVLAVRDIVVFNYMILPLFVGREKSVQAVDAALNGSRYMMICTQHD 88
Query: 57 MDVEEPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLL 116
V++P DL+ G V I+R+L+MPDG +VQG R ++ + +P++ V+ +
Sbjct: 89 EAVDDPTGDDLHKTGTVVMIMRMLKMPDGRLKVLVQGISRAKVKNFVSEDPYLLAEVEAI 148
Query: 117 PDILPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANI 176
+ G E EA++ + ++ S K++ L P +++ + P + +AN+
Sbjct: 149 EEPEAGP-LTVEQEAMIRSAREQSEKILSLR-GVPTADIMAVLNGVDEPGRLADLIAANL 206
Query: 177 STSIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQ 236
+A Q +LE + +R + L KE++V ++A IQ +E MDK QK+YFL++Q
Sbjct: 207 RMKVADAQTILECTDPDERLTLVNEQLVKEVEVAAMQAKIQSMAKEGMDKAQKDYFLREQ 266
Query: 237 IKTIQEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQ 295
+K I+ ELG G D ++ EL A +V + +K+LR+L +HP+S + +V
Sbjct: 267 MKAIRRELGEGPDGDEDMDELIESLAKAGLPKDVRKEADKQLRRLSVMHPESSEATVVRT 326
Query: 296 YVQTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIIC 355
Y++ + LPW S+D ++ RAQ++LD DH+GLEKVK+RI+E+L+V K+ K PI+C
Sbjct: 327 YLEWLAELPWKKLSRDRIDIPRAQAILDEDHYGLEKVKDRILEYLSVRKLNPKSKGPILC 386
Query: 356 LYGPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRA 415
GPPGVGKTSLG+SIA +LGRK+ RISLGG+ DEAEIRGHRRTYIGAM GRIIQ++++
Sbjct: 387 FSGPPGVGKTSLGRSIARALGRKFQRISLGGMRDEAEIRGHRRTYIGAMPGRIIQTIKQL 446
Query: 416 GTSNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATAN 475
GT NPV +LDEIDK+ SD++GDPSSALLEVLDPEQN +F D+YL++ FDLS V+FI TAN
Sbjct: 447 GTRNPVIMLDEIDKLGSDFRGDPSSALLEVLDPEQNFSFSDHYLNVPFDLSKVMFICTAN 506
Query: 476 SLSSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLI 535
L +I PL DRME+I + GY ++EK +IA R+L+P+Q E+G ++D++ + I K+I
Sbjct: 507 QLETIPAPLRDRMEIIRIPGYTMQEKAKIARRYLLPRQAGENGLNEDDVQIADNVITKII 566
Query: 536 DDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNG 595
D+YTRE+G+R LE+++ V RK+ + A +V L LGAPR+ ++ +
Sbjct: 567 DEYTREAGLRNLERELGTVCRKLARRKAEGEDGPFRVTVKVLEKLLGAPRFIDEQKEREL 626
Query: 596 DAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDEL 655
GV +GLAWT GGE+L +E S +G+ KLTLTG LGDVMKESA A+ Y+R+H+ EL
Sbjct: 627 LPGVALGLAWTPYGGEVLNVEVSTMKGKG-KLTLTGQLGDVMKESAQAAVSYVRSHAAEL 685
Query: 656 GISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGK 715
+ E +N +H+HVP GA PKDGPSAG+T++T+L+SALT R V + + MTGEITLRG+
Sbjct: 686 DVDPEFSSNLDIHIHVPAGATPKDGPSAGVTLLTALISALTGRSVNSDLCMTGEITLRGR 745
Query: 716 VLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
VLPVGGIKEKILAA G++ + +N+KD+E+I L+ + H +IN++L AL
Sbjct: 746 VLPVGGIKEKILAAVARGLSHAFIPHQNKKDLEDIPADLLRKINVHPAEHINDILPLAL 804
>gi|78224405|ref|YP_386152.1| Peptidase S16, ATP-dependent protease La [Geobacter metallireducens
GS-15]
gi|78195660|gb|ABB33427.1| Peptidase S16, ATP-dependent protease La [Geobacter metallireducens
GS-15]
Length = 823
Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats.
Identities = 345/775 (44%), Positives = 523/775 (67%), Gaps = 6/775 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E + + +P+L +R+++++P + +P+ VGRE S+ + + +Q++M EE
Sbjct: 14 EELKIPDVLPLLPVRDVVVYPYMILPLFVGREISINAVDQALSRDRLIFLATQKEMGDEE 73
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRV-KLLPDIL 120
P +Y VG VA I+R+L++PDG +VQG + + E ++P R+ +++ +
Sbjct: 74 PTPEGMYTVGTVAMIMRMLKLPDGRVKVLVQGLAKGLITEFVESKPAYTVRIERIVEPSV 133
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
P + E EAL+ +++ +++ L P E+++ + + P + ++NI +
Sbjct: 134 P--EESLETEALMRAVKEQLTQIVSLGKAVSP-EVLVIVENMQEPGSLADLIASNIGLKV 190
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
Q LLEI R ++ L+KE ++++++ IQ +EEM K Q+EYFL++Q++ I
Sbjct: 191 DDAQALLEIIDPVQRLQKVNEHLNKEHELLDMQVKIQSAAKEEMGKSQREYFLREQLRAI 250
Query: 241 QEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQT 299
Q+ELG + E+ ELR K V + K+L +LE++HP + + + ++
Sbjct: 251 QQELGETDPRSEELNELRKAIEQAKMPPVVEKEAFKQLGRLEQMHPDAAEAGMLRTFLDW 310
Query: 300 IISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGP 359
++ LPWG +KD ++KRA+ +LD DHF LEK+KERI+E LAV K++ MK PI+C GP
Sbjct: 311 MVELPWGKATKDVLDIKRARQILDEDHFYLEKIKERILEFLAVRKLRKKMKGPILCFVGP 370
Query: 360 PGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSN 419
PGVGKTSLGKSIA ++GRK+VRISLGG+ DEAEIRGHRRTY+GA+ GRIIQ L++AG++N
Sbjct: 371 PGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGSNN 430
Query: 420 PVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSS 479
PVF+LDE+DK+ +D++GDPSSALLEVLDPEQN+ F D+Y+++ F+LS+V+FIATAN + +
Sbjct: 431 PVFMLDELDKLGADFRGDPSSALLEVLDPEQNHMFSDHYINLPFNLSNVMFIATANQIDT 490
Query: 480 ISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYT 539
+ PL DRME+I +SGY EEK+EIA R+LIP+Q+ E+G + +I S + + +I YT
Sbjct: 491 VPGPLRDRMEVIQLSGYTEEEKLEIAKRYLIPRQMKENGISEKEIVISDEAVRTIIAKYT 550
Query: 540 RESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGV 599
RE+G+R LE++I +V RK+ ++ A ++ P+ + +LG R+ R+ + G+
Sbjct: 551 REAGLRNLEREIGSVCRKVARKVAEGDGRRFRITPATVAKYLGPARFIREGEMEKNEVGI 610
Query: 600 VIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQ 659
V GLAWT VGGE+LF+E ++ +G+ LTLTG+LGDVMKES AL YIR+ + E +++
Sbjct: 611 VTGLAWTPVGGEVLFVEATIMKGKG-GLTLTGHLGDVMKESVQAALSYIRSKAKEFHLAE 669
Query: 660 EIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPV 719
+ + + +HVHVP GAIPKDGPSAG+TM T+LVSALTR VR +AMTGEITLRGKVLP+
Sbjct: 670 DFLSGYDIHVHVPAGAIPKDGPSAGVTMATALVSALTRVPVRKDVAMTGEITLRGKVLPI 729
Query: 720 GGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
GG+KEK+LAA R+GI I++ E+N KD+EEI LK + I++VL AL
Sbjct: 730 GGLKEKMLAAIRAGIKTIVIPEQNEKDLEEIPKHILKKVTVVSAKVIDDVLAVAL 784
>gi|94986593|ref|YP_594526.1| predicted ATP-dependent protease [Lawsonia intracellularis
PHE/MN1-00]
gi|94730842|emb|CAJ54204.1| predicted ATP-dependent protease [Lawsonia intracellularis
PHE/MN1-00]
Length = 830
Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats.
Identities = 346/777 (44%), Positives = 506/777 (65%), Gaps = 4/777 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
V+ + +PIL LR++++F + +P+ VGRE+S++ + G + +Q+D +E
Sbjct: 41 VQPQEIPSSIPILPLRDVVVFNYMIVPLFVGRERSIQAVESATTHGQHIFLCAQKDSQIE 100
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P DLY VG VA I+R+L+MPDG A+VQG R I + ++ V+LL +
Sbjct: 101 NPTEEDLYSVGTVALILRLLKMPDGRLKALVQGISRARCLTIHNEDGYLTATVELLQEPQ 160
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
P K E EAL+ ++ K++ L P E++ + P + +AN+
Sbjct: 161 P-TVKPTEQEALLRYAREQCEKILALR-GIPTGEIMGVLSNVNEPGRLADLIAANLRLKT 218
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
QE+L+ + DR + ++ L E +V ++ IQ RE MDK QK+YFL++Q+K I
Sbjct: 219 EEAQEILQCLEPIDRLHLVITHLTHEAEVATMQVKIQTSAREGMDKAQKDYFLREQLKAI 278
Query: 241 QEELGGNIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQT 299
++ELG I+ D E++E+ + +EV + +K+LR+L +H S + V Y+
Sbjct: 279 RKELGDAIDADEEIEEVSSALNKAGLPAEVRKEVDKQLRRLSTMHADSAEAGVIRTYLDW 338
Query: 300 IISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGP 359
I LPW SKD ++ +A+++L+ DH+GL K+K+RI+E+L+V K+ K PI+C GP
Sbjct: 339 IAELPWKKTSKDQLDIHKAKTILNEDHYGLVKIKDRILEYLSVRKLNPKSKGPILCFAGP 398
Query: 360 PGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSN 419
PGVGKTSLG+SIA+SLGRK+ RISLGG+HDEAEIRGHRRTYIGAM GR+IQ++++AGT N
Sbjct: 399 PGVGKTSLGRSIAKSLGRKFQRISLGGMHDEAEIRGHRRTYIGAMPGRLIQAMKQAGTKN 458
Query: 420 PVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSS 479
PV +LDEIDK+ +D++GDPSSALLE LDPEQN+ F D+YL++ FDLS VLF+ TAN L
Sbjct: 459 PVILLDEIDKLGNDFRGDPSSALLEALDPEQNHNFSDHYLNVPFDLSKVLFLCTANHLEH 518
Query: 480 ISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYT 539
I L DR+E+I + GY +EK+ IA ++++PKQL E+G ++N++ S +EK+I +YT
Sbjct: 519 IPAALKDRLEIISLPGYTQQEKLAIARKYILPKQLKENGLKENELIISDTCLEKIIREYT 578
Query: 540 RESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGV 599
RE+G+R +E++I ++ RK+ ++ A ++ + + FLG PR+ D + GV
Sbjct: 579 REAGLRNMEREIGSLCRKVARKKAEGKKPPFRITTNQIEKFLGIPRFIDDDTEKTLPPGV 638
Query: 600 VIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQ 659
+GLAWT GGEIL+IE S +G+ L LTG LGDVMKESA AL Y R+ + L IS
Sbjct: 639 ALGLAWTPAGGEILYIEVSTVKGKG-NLLLTGQLGDVMKESAQAALSYARSKASSLNISP 697
Query: 660 EIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPV 719
+ + +H+H+P GA PKDGPSAG+T+ T+L+SALT + VR + MTGEITLRG+VLPV
Sbjct: 698 DFAKSMDIHIHIPAGATPKDGPSAGVTLTTALISALTGKSVRGDLCMTGEITLRGRVLPV 757
Query: 720 GGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLE 776
GGIKEK+LA G+ +I+ +N KD+EEI K +K H VS+I+EVL A E
Sbjct: 758 GGIKEKVLAGVARGLGHVIIPTKNTKDLEEIPQELKKKIKIHTVSHIDEVLPLAFSE 814
>gi|146296519|ref|YP_001180290.1| ATP-dependent protease La [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410095|gb|ABP67099.1| ATP-dependent protease La [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 774
Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats.
Identities = 355/771 (46%), Positives = 512/771 (66%), Gaps = 4/771 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
+ +P++ LR +++FP + + VGR+ SLK + ++Q+D EEP D
Sbjct: 7 KRTIPVIPLRGLVVFPYMMLHFDVGRQISLKALEEAMNSDQQVLLLAQKDPKQEEPSPED 66
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
LY G VA+I ++L++P T+ +V+G R + + +P+ V+ + G D
Sbjct: 67 LYQYGTVAKIKQMLKLPSETSRILVEGLSRAKVIGYVSVDPYFLVEVEEYKE-KGGNLDD 125
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E EAL+ + + + + R P + ILS+ +NP + +AN+ + KQ L
Sbjct: 126 PELEALIRNVVS-AFEEYARLTSRIPPDAILSVTTIQNPGQLADVIAANVIVKLEDKQLL 184
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LE +K+R +L L+ +E +++E++ I +K ++++DK QKEY+L++Q+K IQ ELG
Sbjct: 185 LEQVDLKERLTKLYELILREKEIIEIERKITIKVKKQIDKMQKEYYLREQLKAIQSELGE 244
Query: 247 NINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
+ E QE R + + S+E + KE+ +LE+L P SP+ V Y++ II LPW
Sbjct: 245 KDSLFSEAQEYREQVQKLGLSNENLQKVYKEIDRLEKLPPNSPEIGVIRTYLEWIIDLPW 304
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
V S++ ++ ++VLD DH+GL KVKERI+E++AV K+K ++K PI+CL GPPGVGKT
Sbjct: 305 NVKSEEKIDINVVKNVLDEDHYGLTKVKERILEYIAVRKLKNNLKGPILCLVGPPGVGKT 364
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
S+ KSIA +L R YVRISLGGL DEAEIRGHR+TY+GAM GRII +L++A T NP+ +LD
Sbjct: 365 SIAKSIARALNRNYVRISLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLD 424
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ D++GDP+SALLEVLD EQN AF D+Y++I FDLS V+FIATAN+L +I RPLL
Sbjct: 425 EIDKMSQDFRGDPASALLEVLDSEQNYAFRDHYVEIPFDLSEVMFIATANTLETIPRPLL 484
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DR+E+I+++GY EEKVEIA R+L PKQ+ ++G +K+ I++ + I +I YTRESGVR
Sbjct: 485 DRLEVIEITGYTEEEKVEIAKRYLFPKQIEQNGLKKSQIRYDEAVIRDIISFYTRESGVR 544
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE++IA + R++ KE ++ +L +LG +Y RD G+V GLAW
Sbjct: 545 NLEREIARLCRRVAKEILEENKKMVRITTRNLEKYLGVRKYRRDELIEEDRIGIVTGLAW 604
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T GGE L +E + G KL LTG LGDVMKESA A+ IRA + ELGI + + +
Sbjct: 605 TPFGGETLSVEALVMPG-SGKLELTGQLGDVMKESAKAAVSIIRARAKELGIDENFYKEY 663
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGAIPKDGPSAG+TM T++VSAL+++ VR +AMTGEITL G+VLP+GG+KEK
Sbjct: 664 DIHIHVPEGAIPKDGPSAGVTMATAMVSALSKKPVRHDVAMTGEITLSGRVLPIGGVKEK 723
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLE 776
ILAAKR GI +IL EN+KD++E+ D K + F +V I+EV K A+ E
Sbjct: 724 ILAAKRVGIKNVILPYENKKDVDELEDYVKKDMNFVFVKAIDEVFKIAIKE 774
>gi|108763822|ref|YP_632173.1| ATP-dependent protease La [Myxococcus xanthus DK 1622]
gi|547861|sp|P36774|LON2_MYXXA ATP-dependent protease La 2
gi|309546|gb|AAA72018.1| ATP-dependent protease
gi|435451|dbj|BAA02491.1| ATP-dependent protease La [Myxococcus xanthus]
gi|108467702|gb|ABF92887.1| ATP-dependent protease La [Myxococcus xanthus DK 1622]
Length = 827
Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats.
Identities = 351/777 (45%), Positives = 510/777 (65%), Gaps = 9/777 (1%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ ++ + + +PIL LRN + FPG +P+ VGR+K++ LI+ + G V+QR + E
Sbjct: 24 INKEDIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDDQVIGVVTQRRAEEE 83
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
+P ADLY +G VA I+++L+M + + +VQG RF + E+ P++K RV + D
Sbjct: 84 DPGAADLYTMGTVARIVKLLKMGEDNYSLVVQGLARFRVVELVQEAPYLKARVDAVEDKT 143
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPP--RELILSMRRNKNPMYQINFASANIST 178
+N E EAL ++ ++ +++ELM E P EL+ S+ +P + + +AN+
Sbjct: 144 SSENV--EVEALGINLKKLAREVIELMPELPAAATELVESI---THPGHLADLIAANVDV 198
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
I KQ +LE +K R +L LL+++ ++++L I + EM K Q+EY+L+QQ+K
Sbjct: 199 PIEEKQAVLETVDLKARMKLVLELLNRKREILKLSNKIDSAVKGEMSKTQREYYLRQQLK 258
Query: 239 TIQEELGGNINDIEVQELRTKAATMK-WSSEVAETFEKELRKLERLHPQSPDYSVQMQYV 297
I+EELG + E + + +V + KEL +L+ + S +Y+V Y+
Sbjct: 259 AIKEELGEMGEEEEELDELQERLKKAGLPPDVEKVANKELNRLKTIPAASSEYTVARTYL 318
Query: 298 QTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLY 357
I LPW S+DN +++ A+ LD+DHFG++KVK+RI+E+LAV K+K DM+ PI+CL
Sbjct: 319 DWIADLPWAKISEDNLDIENARQQLDKDHFGIKKVKKRILEYLAVRKLKNDMRGPILCLV 378
Query: 358 GPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGT 417
GPPGVGKTSLG+S+A++ GRK+VR+SLGG+ DEAEIRGHRRTY+GA+ GR IQS+++AGT
Sbjct: 379 GPPGVGKTSLGQSVAKATGRKFVRLSLGGVRDEAEIRGHRRTYVGALPGRFIQSMKKAGT 438
Query: 418 SNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSL 477
NPV +LDEIDK+ +D++GDPS+ALLEVLDPEQNN F D+YLD+ FDLS V+F+ATAN L
Sbjct: 439 KNPVMMLDEIDKLGADFRGDPSAALLEVLDPEQNNTFSDHYLDVPFDLSKVMFVATANQL 498
Query: 478 SSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDD 537
I PL DRME+I+++GY EEK IA HL+PKQL EHG + I + + + L
Sbjct: 499 DPIPGPLRDRMEIIELTGYTFEEKQSIARIHLVPKQLKEHGLSPDHIDITDEALLTLTTA 558
Query: 538 YTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDA 597
YTRE+GVR LE++IA + R + E A + + LG + + +
Sbjct: 559 YTREAGVRNLERRIADICRAVAVEVAGGKTEKQTINADRVKEILGPEMFYSEVAERTEVP 618
Query: 598 GVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGI 657
GV GLAWT+ GG++LFIE + G+ +TLTG LGDVMKESA AL Y+R+ +++LGI
Sbjct: 619 GVATGLAWTAAGGDLLFIEATKMAGKG-GMTLTGQLGDVMKESATAALSYLRSKAEQLGI 677
Query: 658 SQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVL 717
S +H+H P G+IPKDGPSAG+T++T+L S LT +VR AMTGE TLRG VL
Sbjct: 678 SPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTSLLTGIRVRHDTAMTGEATLRGLVL 737
Query: 718 PVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
PVGGIKEK+LAA R+GI +IL E RKD+ ++ D L+F +V+++++VLK AL
Sbjct: 738 PVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQARNELEFIFVTHMDDVLKAAL 794
>gi|83589395|ref|YP_429404.1| ATP-dependent protease La [Moorella thermoacetica ATCC 39073]
gi|83572309|gb|ABC18861.1| ATP-dependent protease La [Moorella thermoacetica ATCC 39073]
Length = 768
Score = 639 bits (1647), Expect = 0.0, Method: Composition-based stats.
Identities = 351/770 (45%), Positives = 514/770 (66%), Gaps = 6/770 (0%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
M+ +P+L LR +I+FP + + +GRE+S+ I Q++ ++P
Sbjct: 1 MRRALPLLPLRGVIVFPYTVIHLDIGRERSVSAIEAAMLGDRVIFLAMQKEAQDDDPGED 60
Query: 66 DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNK 125
D+Y G +AEI ++L++P GT +V+G +R ++E + +PF+K V+ P+
Sbjct: 61 DIYTTGTIAEIKQLLKLPGGTIRILVEGIRRGEIKEYISHDPFLKVEVEEAPEP---AET 117
Query: 126 DHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
E EAL+ + D + M ++ P E ++++ + P + +++++ + KQ
Sbjct: 118 SPEIEALMRCLID-EFETYVKMAKKIPPETVVAVVSLEEPGRLADVVASHLNLKLTDKQA 176
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
+LE +K R L +L KE +++EL+ I ++ R++M+K QKEY+L++QIK IQ+ELG
Sbjct: 177 VLEAVDIKTRLNILCDILAKEKEILELERKISLRVRKQMEKAQKEYYLREQIKAIQKELG 236
Query: 246 GNINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
+ + E +ELR + A + E+ E KE+ +LE++ P + +V Y+ I++LP
Sbjct: 237 EKDDRVAEAEELRERIAKARLPKEIRERALKEVERLEKMPPMVAEVTVVRNYLDWILALP 296
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGK 364
W ++D ++K A+ +LD DH+GL++VKERI+E+LA+ ++ M+ PI+C GPPGVGK
Sbjct: 297 WHKQTRDRLDIKVAEEILDEDHYGLKEVKERILEYLAIRQLAKKMRGPILCFVGPPGVGK 356
Query: 365 TSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVL 424
TSL KSIA +L RK+VRISLGG DEAEIRGHRRTY+GA+ GRIIQ +++AGT NPVF+L
Sbjct: 357 TSLAKSIARALQRKFVRISLGGTRDEAEIRGHRRTYVGALPGRIIQGMKQAGTKNPVFLL 416
Query: 425 DEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPL 484
DEIDK+ SD++GDP+SALLEVLDPEQN F D+Y++ FDLS V+FI TAN SI RPL
Sbjct: 417 DEIDKLSSDFRGDPASALLEVLDPEQNYMFSDHYIEAPFDLSKVMFITTANVEYSIPRPL 476
Query: 485 LDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGV 544
LDRME+I + GY EEKV+IA HL+PKQL EHG +K ++ S+ + +++ +YTRE+GV
Sbjct: 477 LDRMEVIRIPGYTEEEKVKIAELHLLPKQLEEHGLKKQQLEVSENALRRIVREYTREAGV 536
Query: 545 RTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLA 604
R LE++IA + RK ++ + KV +++ +LG PR+ + N GVV GLA
Sbjct: 537 RNLEREIATICRKTARDIVSGKTKAVKVTANNVEQYLGIPRFHHTQAIRNEMVGVVNGLA 596
Query: 605 WTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNN 664
WT VGGE+L +E S+ +G+ LTLTG LGDVMKESA Y+R+ + ELG+ ++
Sbjct: 597 WTEVGGEVLNVEVSILKGKG-NLTLTGKLGDVMKESAYAGFSYLRSRAAELGLEEDFHEK 655
Query: 665 WQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKE 724
+ +H+HVPEGAIPKDGPSAGITM T++ SAL VR+ +AMTGEITLRG+VLPVGGIKE
Sbjct: 656 FDLHIHVPEGAIPKDGPSAGITMATAMASALKGVPVRSDLAMTGEITLRGRVLPVGGIKE 715
Query: 725 KILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
KILAA R GI IIL EN K++E+I + + F V +++EVLKEAL
Sbjct: 716 KILAAHREGIKNIILPRENEKNLEDIPANIKRKMNFILVEHMDEVLKEAL 765
>gi|76796021|ref|ZP_00778390.1| Peptidase S16, ATP-dependent protease La [Thermoanaerobacter
ethanolicus ATCC 33223]
gi|76588603|gb|EAO65006.1| Peptidase S16, ATP-dependent protease La [Thermoanaerobacter
ethanolicus ATCC 33223]
Length = 793
Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats.
Identities = 354/769 (46%), Positives = 507/769 (65%), Gaps = 4/769 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P++ LR + +FP + + +GREKS++ + K +Q++ ++E+P D+Y
Sbjct: 23 LPMIPLRGLTIFPYMVLHFDIGREKSIRALEEAFMKNQLIFVTTQKEAEIEDPSIDDVYK 82
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VG + ++ ++L++P +V+G R +Q++T + F + V + K E
Sbjct: 83 VGTITKVKQMLKLPGELIRVLVEGISRAEIQQVTRDDEFFEVEVIEKEEQKE-IEKTPEL 141
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL+ ++ + + M R P + + S+ + P + +A+IS + Q+LLE
Sbjct: 142 EALMRSVISAFEEYVN-MTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTNQSQQLLEC 200
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+ R LL L KEL+++ ++ I K R ++DK QKEY+L++Q+K I+ ELG
Sbjct: 201 FDVNKRLETLLGFLMKELEILNIEREINAKVRSQIDKLQKEYYLREQLKAIKAELGETDE 260
Query: 250 -DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
D E++E K EV + ++EL++L ++ P S + SV Y+ I+ LPW
Sbjct: 261 IDQEIEEYEKKINEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYE 320
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D +LKRAQ +LD DH+GL+KVKERIIE LAV +KSPI+CL GPPGVGKTSLG
Sbjct: 321 TEDILDLKRAQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLG 380
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA ++ RK+VR+SLGG+ DEAEIRGHRRTY+GA+ G II S++ AG+ NPVF+LDEID
Sbjct: 381 RSIARAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEID 440
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ SD++GDP+SA+LEVLDPEQN+ F D+YLD+ FDLS VLFI TAN++ +I PLLDRM
Sbjct: 441 KMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRM 500
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I VSGY EEK+ IA +LIPK L EHG N I + I +I +YTRE+GVR LE
Sbjct: 501 EVIYVSGYTEEEKLHIAKDYLIPKILKEHGVPDNKIIIQESAIYGIISEYTREAGVRGLE 560
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
K ++ ++RK K+ KV +L ++LG P Y D+ + G+V GLAWT V
Sbjct: 561 KNLSQIVRKAIKKIVEENAQVVKVGKRNLQSYLGKPIYRPDKANQKDEVGIVFGLAWTRV 620
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GGEIL +E S+ G KL LTG LGDVMKESA YIRA++++L I ++ + N +H
Sbjct: 621 GGEILTVEASIMPG-SGKLNLTGQLGDVMKESAQAGFSYIRANAEKLNIDKDFYKNIDIH 679
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+HVPEGAIPKDGPSAGITMVT++VSAL + VR +AMTGEITL GKVLP+GG+KEK+LA
Sbjct: 680 IHVPEGAIPKDGPSAGITMVTAMVSALKKVPVRKDVAMTGEITLTGKVLPIGGVKEKVLA 739
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
A R+GI ++IL +EN++D++EI + L+F +V I+EVL AL++E
Sbjct: 740 AHRAGIGKVILPQENKRDLDEIPQSVKRKLEFKFVEKIDEVLDFALVKE 788
>gi|114843495|ref|ZP_01453959.1| ATP-dependent protease La [Thermoanaerobacter ethanolicus X514]
gi|114806476|gb|EAU58253.1| ATP-dependent protease La [Thermoanaerobacter ethanolicus X514]
Length = 778
Score = 637 bits (1642), Expect = e-180, Method: Composition-based stats.
Identities = 353/769 (45%), Positives = 509/769 (66%), Gaps = 4/769 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P++ LR + +FP + + +GREKS++ + K +Q++ ++E+P D+Y
Sbjct: 8 LPMIPLRGLTIFPYMVLHFDIGREKSIRALEEAFMKNQLIFVTTQKEAEIEDPSIDDVYK 67
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VG + ++ ++L++P +V+G R +Q++T + F + V + ++ K E
Sbjct: 68 VGTITKVKQMLKLPGELIRVLVEGISRAEIQQVTRDDEFFEVEV-IEKEVQKEIEKTPEL 126
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL+ ++ + + M R P + + S+ + P + +A+IS + + Q+LLE
Sbjct: 127 EALMRSVISAFEEYVN-MTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTSQSQQLLEC 185
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
R LL L KEL+++ ++ I K R ++DK QKEY+L++Q+K I+ ELG
Sbjct: 186 FDANKRLETLLGFLMKELEILNIEKEINAKVRSQIDKLQKEYYLREQLKAIKAELGETDE 245
Query: 250 -DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
D E++E K EV + ++EL++L ++ P S + SV Y+ I+ LPW
Sbjct: 246 VDQEIEEYEKKLNEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYE 305
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D +LKRAQ +LD DH+GL+KVKERIIE LAV +KSPI+CL GPPGVGKTSLG
Sbjct: 306 TEDILDLKRAQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLG 365
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA ++ RK+VR+SLGG+ DEAEIRGHRRTY+GA+ G II S++ AG+ NPVF+LDEID
Sbjct: 366 RSIARAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEID 425
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ SD++GDP+SA+LEVLDPEQN+ F D+YLD+ FDLS VLFI TAN++ +I PLLDRM
Sbjct: 426 KMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRM 485
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I VSGY EEK+ IA +LIPK L EHG N I + I+ +I +YTRE+GVR LE
Sbjct: 486 EVIYVSGYTEEEKLHIAKDYLIPKILKEHGVPDNKIIIQESAIKGIISEYTREAGVRGLE 545
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
K ++ ++RK K+ KV +L ++L P Y D+ + G+V GLAWT V
Sbjct: 546 KNLSQIVRKAIKKIVEENAQVVKVGKRNLQSYLDKPIYRPDKANQKDEVGIVFGLAWTRV 605
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GGEIL +E S+ G KL LTG LGDVMKESA YIRA++++L I ++ + N +H
Sbjct: 606 GGEILTVEASIMPG-SGKLNLTGQLGDVMKESAQAGFSYIRANAEKLNIDKDFYKNIDIH 664
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+HVPEGAIPKDGPSAGITMVT++VSAL + VR +AMTGEITL GKVLP+GG+KEK+LA
Sbjct: 665 IHVPEGAIPKDGPSAGITMVTAMVSALKKVPVRKDVAMTGEITLTGKVLPIGGVKEKVLA 724
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
A R+GI ++IL +EN++D++EI + L+F +V I+EVL AL++E
Sbjct: 725 AHRAGIGKVILPQENKRDLDEIPQSVKRKLEFKFVEKIDEVLDFALVKE 773
>gi|77919285|ref|YP_357100.1| ATP-dependent protease La [Pelobacter carbinolicus DSM 2380]
gi|77545368|gb|ABA88930.1| ATP-dependent protease La [Pelobacter carbinolicus DSM 2380]
Length = 801
Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats.
Identities = 346/770 (44%), Positives = 519/770 (67%), Gaps = 11/770 (1%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR++++FP + P+ V R+KS++ + + +Q D V+EP D+Y+
Sbjct: 13 VPLLPLRDIVIFPFMVTPLFVARDKSIRALEEAMEGEKLIFLATQEDPQVDEPSLDDVYE 72
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G +A I+++L++PDGT +V+G+ R + + + ++ L D +N E
Sbjct: 73 IGTLANIVQLLKLPDGTLKVLVEGQSRGRIDHWASADECIRVEFTELSDAEVVENA--EL 130
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL+ ++ ++ + L ++ P E+ S+ + P + +A++S + KQELL +
Sbjct: 131 EALLRSVCELFETYVSLS-KKIPAEVAASVSATQAPGRLSDTVAAHLSLRVDEKQELLAL 189
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+R RL+ LL +E++++E++ I+ + + +M++ QKEY+L +Q++ IQ+ELG +
Sbjct: 190 VDPIERLERLITLLAREVEILEIEKKIRSRVKGQMERSQKEYYLNEQMRAIQKELGESDE 249
Query: 250 -DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
IE++EL + + + E ELRKL + P S + +V YV + S+PW
Sbjct: 250 FKIELKELEDRIQQASMTKDAQERAMAELRKLRMMSPTSAEATVVRNYVDWLASVPWKKK 309
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D ++ A+ +L+ DH+GLEKVKERI+E+LAV + +K PI+CL GPPGVGKTSLG
Sbjct: 310 TRDRRDMVYAEKILEADHYGLEKVKERILEYLAVQALVKKIKGPILCLVGPPGVGKTSLG 369
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
KSIA +LGRK+ RISLGGL DEAEIRGHRRTYIGAM G+I+Q++++ NPVF+LDEID
Sbjct: 370 KSIARALGRKFARISLGGLRDEAEIRGHRRTYIGAMPGKIVQNMRKVAVKNPVFLLDEID 429
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ SD++GDPSSALLEVLDPEQN F D+Y+++++DLS V+FIATANS+ SI+RPLLDRM
Sbjct: 430 KVSSDFRGDPSSALLEVLDPEQNGTFGDHYMEVEYDLSDVMFIATANSMHSIARPLLDRM 489
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I + GY +EKV IA ++L+ KQ+ HG + F I +I YTRE+GVR LE
Sbjct: 490 EVIRIEGYTEDEKVNIAQKYLVEKQIKAHGLNAKGLNFQDSAIYAIIRSYTREAGVRNLE 549
Query: 549 KQIAAVIRKITKEAATNVVHTTKVE---PSDLVT-FLGAPRYTRDRYQGNGDAGVVIGLA 604
++IA + RK+ ++ + KVE +D V FLG PRY + + G+ GLA
Sbjct: 550 REIANICRKVARQVVLS--KGKKVEFNLDADAVKEFLGVPRYEHGIKEEDSCVGMATGLA 607
Query: 605 WTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNN 664
WT VGGE+L IETS+ G KLT+TG LG+VM+ESA AL YIR+ +EL + ++ ++
Sbjct: 608 WTEVGGELLTIETSILPG-HGKLTVTGKLGEVMQESAKAALSYIRSRWEELQLEKDFYHK 666
Query: 665 WQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKE 724
+H+HVPEGAIPKDGPSAGITM T+L SALT R+V +AMTGEITLRG+VLP+GG+KE
Sbjct: 667 IDIHIHVPEGAIPKDGPSAGITMATALASALTGREVDRNLAMTGEITLRGRVLPIGGLKE 726
Query: 725 KILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
K+LAAKR+GIT +++ EN+K++E++ + L L+ VS+++EVL++ L
Sbjct: 727 KLLAAKRAGITRVLIPAENKKNLEDVPETILSALEVLPVSHMDEVLEQGL 776
>gi|20807121|ref|NP_622292.1| ATP-dependent Lon protease, bacterial type [Thermoanaerobacter
tengcongensis MB4]
gi|20515615|gb|AAM23896.1| ATP-dependent Lon protease, bacterial type [Thermoanaerobacter
tengcongensis MB4]
Length = 778
Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats.
Identities = 356/770 (46%), Positives = 512/770 (66%), Gaps = 4/770 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P++ LR + +FP + + +GREKS++ + K +Q+D ++E+P D+Y
Sbjct: 8 LPMIPLRGLTIFPYMVIHFDIGREKSIRALEEAFMKNQLIFVTTQKDPELEDPSIEDVYK 67
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VG + ++ ++L++P +V+G R + ++T + F + + + K E
Sbjct: 68 VGTITKVKQMLKLPGELIRILVEGISRAEIDKVTREDEFFE-VEVVEKEEQAEIEKTPEL 126
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL+ ++ + + M R P E + ++ + P + +A+IS S A QELLE
Sbjct: 127 EALMRSVVSAFEEYVN-MTSRVPIESLYNVISIEEPGRLADMIAAHISLSTAQNQELLEC 185
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+K R LL L KEL++++++ I K R ++DK QKEY+L++Q+K I+ ELG +
Sbjct: 186 FDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLREQLKAIKAELGETED 245
Query: 250 -DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
D E++E K EV + ++EL++L ++ P S + SV Y+ I+ LPW
Sbjct: 246 FDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVRTYLDWILELPWNYE 305
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D +LKRAQ +LD DH+GL+KVKERIIE LAV +KSPI+CL GPPGVGKTSLG
Sbjct: 306 TEDILDLKRAQRILDEDHYGLKKVKERIIEFLAVRAFYNKVKSPILCLVGPPGVGKTSLG 365
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA+++ RK+VR+SLGG+ DEAEIRGHRRTY+GA+ G II S++ AG+ NPVF+LDEID
Sbjct: 366 RSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEID 425
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ SD++GDP+SA+LEVLDPEQN+ F D+YLD+ FDLS VLFI TAN+ +I PLLDRM
Sbjct: 426 KMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAPLLDRM 485
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I +SGY EEK IA +LIPK L EHG N I I+ +I +YTRE+GVR LE
Sbjct: 486 EVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKGIISEYTREAGVRGLE 545
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
K +A ++RK ++ + V KV +L ++LG P + D+ + G V+GLAWT V
Sbjct: 546 KHLATIVRKAIRKIMEDNVPYVKVGKKNLQSYLGKPLFRPDKANEKSEIGTVMGLAWTRV 605
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GGEIL +E S+ G KL LTG LGDVMKESA L YIRA+++ LGI ++ + N +H
Sbjct: 606 GGEILTVEASIMPG-SGKLNLTGQLGDVMKESAQAGLSYIRANAERLGIDKDFYKNVDIH 664
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+HVPEG+IPKDGPSAG+TMVT++VSAL + VR +AMTGEITL G+VLP+GG+KEK+LA
Sbjct: 665 IHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPIGGVKEKVLA 724
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
A R+GI +IL EN++D++EI K L+F +V I+EVL+ AL++E+
Sbjct: 725 AHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYALVKEE 774
>gi|94969078|ref|YP_591126.1| ATP-dependent protease La [Acidobacteria bacterium Ellin345]
gi|94551128|gb|ABF41052.1| ATP-dependent protease La [Acidobacteria bacterium Ellin345]
Length = 814
Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats.
Identities = 354/785 (45%), Positives = 516/785 (65%), Gaps = 19/785 (2%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYV-EKKGVYFGAVSQRDMDVEEPDRADLY 68
+P+L +R+ +LFP +P+ VGRE S++LI + E K + V+QR+ V+ P +DL+
Sbjct: 25 LPLLPVRDTVLFPHAVLPLTVGRESSVQLINSLGEDKTIV--VVAQREARVDSPQPSDLF 82
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHE 128
+G +A + +V++MP+ + +G +R + E P+M+ V+ +P+ P K+ E
Sbjct: 83 AIGSLAVVHKVVKMPNQSLFVFAEGLERVRVTEYVQLNPYMRATVETVPEAFPPKSA--E 140
Query: 129 FEALVSTIQDMSLKMMELMVERPPR---ELILSMRRNKNPMYQINFASANI-STSIAVKQ 184
EAL Q L + + +V P EL + P ++F ++++ S S KQ
Sbjct: 141 IEAL----QRNVLTLFQQIVTGSPTLSDELSTVAMNIEEPGRLVDFVASSLPSLSTKDKQ 196
Query: 185 ELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEEL 244
E+LE + ++ R ++ L KEL+V +L+ IQ + ++ + + Q+EY+L++Q+K IQ+EL
Sbjct: 197 EILETADVQIRLDKINQHLAKELEVQQLRNKIQSEVQDRVQQTQREYYLREQLKAIQKEL 256
Query: 245 GGNINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISL 303
G + + ELR K +V + KEL +L R+ P + DYSV Y++ + L
Sbjct: 257 GEQDDSTRDADELREKVEAAGMPDDVKKEALKELGRLARMSPMAADYSVTRNYIEWLAVL 316
Query: 304 PWGVFS-KDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
PW S ++ +A+ +LD DH+ L+KVK+RI+++L+V ++K +MK PI+C GPPGV
Sbjct: 317 PWQKSSGAGEIDIPKAKDILDEDHYDLQKVKDRILDYLSVRRLKPNMKGPILCFSGPPGV 376
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSLGKSIA +LGRK+VRISLGG+HDEAEIRGHRRTYIGA+ G+I+Q ++RA T++PVF
Sbjct: 377 GKTSLGKSIARALGRKFVRISLGGVHDEAEIRGHRRTYIGALPGQIMQGIRRAETNDPVF 436
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
+LDEIDK+ D++GDPS+ALLE LDPEQNN+F DNYLD+ FDLS VLFI TAN L I
Sbjct: 437 MLDEIDKVGRDFRGDPSAALLEALDPEQNNSFRDNYLDVPFDLSKVLFITTANQLDPIPE 496
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRES 542
PL DRME+ID+ GY EEKV IA R+LIP+Q E+G K+ I+FS++ + ++I YTRE+
Sbjct: 497 PLRDRMEIIDLQGYSEEEKVHIAFRYLIPRQEEENGITKDMIEFSEEAVRRIIRHYTREA 556
Query: 543 GVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDR--YQGNGDAGVV 600
GVR LE+ I V RK+ + A V P + LG + D + AGVV
Sbjct: 557 GVRNLERNIGTVCRKLARRIAEGKTEKLAVTPQTITEMLGGEKVRVDTEIAERTKRAGVV 616
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
+GLAWT GG+ILF+E + +G+ T+TG LGDVM+ES AL ++++++ +LGI +E
Sbjct: 617 VGLAWTPAGGDILFVEATTMKGK-GGFTMTGQLGDVMRESMQAALSWVKSNAGKLGIDEE 675
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
F +H+HVP GAIPKDGPSAG+TMVT+LVS LT + +R AMTGEITL G VLP+G
Sbjct: 676 FFEKHDIHIHVPAGAIPKDGPSAGVTMVTALVSLLTDKPLRPLTAMTGEITLSGNVLPIG 735
Query: 721 GIKEKILAAKRSGITEIILCEENRKDI-EEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
G+KEK LAAKR+G+ IIL EN+ ++ E++ L+G++ HYV I+EVL+ AL K
Sbjct: 736 GVKEKTLAAKRAGVKTIILPSENKMNMDEDLTPEQLQGIEVHYVKTIDEVLEIALPSNKA 795
Query: 780 IDTTD 784
+ D
Sbjct: 796 EEKQD 800
>gi|78223078|ref|YP_384825.1| Peptidase S16, ATP-dependent protease La [Geobacter metallireducens
GS-15]
gi|78194333|gb|ABB32100.1| Peptidase S16, ATP-dependent protease La [Geobacter metallireducens
GS-15]
Length = 805
Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats.
Identities = 338/772 (43%), Positives = 518/772 (67%), Gaps = 10/772 (1%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
E P+L LR++++FP + +P+ VGREKS+ + +Q++ EEP+ D+
Sbjct: 16 ERFPLLPLRDIVVFPHMVVPLFVGREKSISALEAAMNDNRLIFLATQKNAKTEEPNEEDI 75
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEI-TATEPFMKGRVKLLPDILPGKNKD 126
Y +G V+++I++L++PDGT +V+G++R + F+ V++ P LPG+++
Sbjct: 76 YSIGTVSQVIQLLKLPDGTVKVLVEGKRRGVIASYHPEANHFI---VEVQP--LPGESET 130
Query: 127 -HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
E EALV + + ++L + P+E + + +P + + +++ ++ +QE
Sbjct: 131 TSEMEALVRSARSTFESYVKL-TKGIPQETVSATLNITDPGRLADTLAPHLNLKLSDRQE 189
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
LL +++ R RLL + E+++++L++ I+ + +++M+K QKEY+L +Q++ IQ+ELG
Sbjct: 190 LLALAESGHRLERLLAFMESEVEILQLESKIRTRVKKQMEKNQKEYYLNEQMRAIQKELG 249
Query: 246 GNIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
G + E+ EL K + K S E + EL+KL+ + P S + +V YV + +LP
Sbjct: 250 GKDDYKQEIAELEEKVSQGKLSKEAKQKALAELKKLKLMSPASAEAAVVRNYVDWLATLP 309
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGK 364
WG S++ ++ A+ +LD DH+GL KVKERI+E L+V + ++ PI+CL GPPGVGK
Sbjct: 310 WGKLSREKHDIVAAERILDEDHYGLVKVKERILEFLSVQTLVKKIRGPILCLVGPPGVGK 369
Query: 365 TSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVL 424
TSL +SIA + GRK+V++SLGG+ DEAEIRGHRRTY+GAM G+IIQ+L++AG++NPVF+L
Sbjct: 370 TSLARSIATATGRKFVKMSLGGMRDEAEIRGHRRTYVGAMPGKIIQNLKKAGSNNPVFLL 429
Query: 425 DEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPL 484
DE+DK+ SD++GDP+SA+LEVLDPEQN F D++LD+++DLS V+FIATANS+ I RPL
Sbjct: 430 DELDKMSSDFRGDPASAMLEVLDPEQNAHFSDHFLDVEYDLSRVMFIATANSIHGIPRPL 489
Query: 485 LDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGV 544
LDR+E+I + GY EK+ IA R+L+ KQ+ +G + S K I +I Y+RE+GV
Sbjct: 490 LDRLEVIRLDGYTEHEKLAIAERYLVKKQMEANGLALERVSISSKAILDMIRFYSREAGV 549
Query: 545 RTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLA 604
R LE++IA+V RK+ ++P L FLG PR+ + AG V GLA
Sbjct: 550 RNLEREIASVCRKVAHRIVRGEKKKFTLQPKHLKDFLGPPRFRIGTAEEKDSAGAVTGLA 609
Query: 605 WTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNN 664
WT VGG++L IE ++ G+ KLT+TG LG+VM+ESA A+ Y+R+ + LG+ ++ +
Sbjct: 610 WTEVGGDLLTIEVAIVPGKG-KLTITGKLGEVMQESAQAAMTYVRSRAHILGLERDFYQA 668
Query: 665 WQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKE 724
+H+HVPEGAIPKDGPSAGIT+ T++ SALT R VR IAMTGE+TLRG VLP+GG+KE
Sbjct: 669 IDIHIHVPEGAIPKDGPSAGITIATAITSALTGRGVRRDIAMTGEVTLRGNVLPIGGLKE 728
Query: 725 KILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLE 776
K+LAA+R GI E+I+ +N+KD+ EI +G+ VS+++EVL ALLE
Sbjct: 729 KLLAARRGGIKEVIIPGDNQKDLHEIPQEVYEGMTITSVSHMDEVLSRALLE 780
>gi|149917792|ref|ZP_01906287.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
gi|149821312|gb|EDM80714.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
Length = 794
Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats.
Identities = 348/778 (44%), Positives = 509/778 (65%), Gaps = 12/778 (1%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIR-YVEKKGVYFGAVSQRDMDVEEPDR 64
+ E + +L LRN +LFPG +PI VGR KS+KLI + + G V+QR E+P
Sbjct: 13 LPEVISLLPLRNSVLFPGSIIPIDVGRPKSVKLIEEAIAAERPVIGIVAQRQARTEDPKL 72
Query: 65 ADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKN 124
DL+ VG I++V+++ + I+QG R ++E+ A EPF++ RV LP+ P +
Sbjct: 73 EDLHSVGCAVRILKVIKLARDNYSVILQGVMRIRVEELVADEPFLQARVTELPETEPSRV 132
Query: 125 KDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQ 184
E EA+V+ I++ + K++ L+ E P RE + P + ++N+ KQ
Sbjct: 133 ---ESEAMVANIKETAKKLISLVPELP-REAAALLDSVTEPGQVADLVASNLDIEPNEKQ 188
Query: 185 ELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEEL 244
E+LE + R ++L LL ++L+++E++ I + +EEM Q+EY L+QQ+K I+ EL
Sbjct: 189 EVLEAFDVGVRLRKVLTLLTRQLEILEIRERINTQVQEEMGHSQREYVLRQQLKAIKGEL 248
Query: 245 GGNIND--IEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
G I+D + E K A K E + K+L +L+++ P S +Y+V Y++ +
Sbjct: 249 G-EIDDENADADEFEQKIAEAKMPEEAEKAAFKQLNRLKQMQPSSAEYTVTRTYLEWLTD 307
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
LPW ++D + + VL+ DH+ LEKVK+RI+E++AVLK+ K PI+CL GPPGV
Sbjct: 308 LPWSKSTEDQLEIGMVRDVLNEDHYDLEKVKKRILEYMAVLKLNASKKGPILCLAGPPGV 367
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSLGKS+A ++GR +VRISLGG+ DEAEIRGHRRTY+G++ GRIIQ+L+RAGT+NPV
Sbjct: 368 GKTSLGKSVARAIGRSFVRISLGGVRDEAEIRGHRRTYVGSLPGRIIQALKRAGTNNPVI 427
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
VLDEIDK+ D++GDP+SALLEVLDPEQN+ F D+YL++ FDLS V+FIATAN++ I
Sbjct: 428 VLDEIDKLGHDFRGDPASALLEVLDPEQNHTFSDHYLEVTFDLSRVMFIATANTIDPIPP 487
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIK--FSKKTIEKLIDDYTR 540
L DR+E++++ GY +EK IA R L+PKQ+ EHG ++D++ FS+ + +LID YTR
Sbjct: 488 ALRDRLEILELPGYTRQEKAAIAKRFLLPKQISEHGLTRDDLEVDFSEGAVMELIDSYTR 547
Query: 541 ESGVRTLEKQIAAVIRKIT-KEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGV 599
E+GVR L+++I++V+R + K V +E + FLG +Y + GV
Sbjct: 548 EAGVRNLQREISSVVRGVAVKFVEGEVSGKVTIEAEQIPEFLGPQKYIPEMADRTASPGV 607
Query: 600 VIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQ 659
GLAWT GGEI+FIE + G+ L LTG LGDVMKESA A+ Y+++H ++LGI +
Sbjct: 608 ATGLAWTPTGGEIMFIEATSMPGKG-GLMLTGQLGDVMKESAQAAMSYLKSHLEDLGIDK 666
Query: 660 EIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPV 719
+ + +H+HVP GAIPKDGPSAG+ + ++LVS LT R +R+ +AMTGEITLRG VLPV
Sbjct: 667 DALDGRDIHIHVPAGAIPKDGPSAGVAIFSALVSLLTGRCIRSDVAMTGEITLRGLVLPV 726
Query: 720 GGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
GGIKEK+L A R+GI I L E N KD+ ++ + ++ Y ++EVL AL +E
Sbjct: 727 GGIKEKLLGAHRAGIRRIFLPERNEKDVVDVPEEIRSEIEIIYAKAVHEVLGRALEDE 784
>gi|95930401|ref|ZP_01313137.1| ATP-dependent protease La [Desulfuromonas acetoxidans DSM 684]
gi|95133441|gb|EAT15104.1| ATP-dependent protease La [Desulfuromonas acetoxidans DSM 684]
Length = 793
Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats.
Identities = 347/771 (45%), Positives = 512/771 (66%), Gaps = 8/771 (1%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR++++FP + P+ VGR +S+ + V+Q D +++EP R DL+
Sbjct: 17 IPLLPLRDIVIFPEMVTPLFVGRPRSIAALEKAMDGQRLIFLVAQNDAEIDEPGRDDLFS 76
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G VA+I ++L++PDGT +V+G R L E+ E + +I G E
Sbjct: 77 IGTVAKISQLLKLPDGTMKLLVEGMVRAELLELIDEEACT---LACCEEIQEGSCGSLET 133
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+ALV + +++ + + P E++ ++ + + +A+++ + KQE+LE
Sbjct: 134 QALVRSAKELFDAYVSFS-SKVPAEVVTAVENVTSAGNLADIITAHLNLRVDEKQEVLEQ 192
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+ DR LL L+ +E+++++++ I+ + + +M++ QKEY+L +Q++ IQ+ELG
Sbjct: 193 IDVCDRLELLLELMEREVEILKIEKKIRKRVKNQMERTQKEYYLNEQMRAIQKELGDKDE 252
Query: 250 -DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
E+ EL + K S E E ELRKL+ + P S + +V Y+ ++S+PW
Sbjct: 253 FKQELIELEEQIEKRKMSREATEKATAELRKLKMMSPMSAEATVVRNYIDWLLSMPWQKS 312
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D+ +L+RA+++LD DH+GL+KVKERI+EHLAV + +K PI+CL GPPGVGKTSLG
Sbjct: 313 TRDSTDLERAKAILDEDHYGLDKVKERILEHLAVQTLVKKIKGPILCLVGPPGVGKTSLG 372
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA ++ RK++RISLGG+ DEAEIRGHRRTYIGAM G++IQS+++AG NPVF+LDEID
Sbjct: 373 RSIARAINRKFIRISLGGVRDEAEIRGHRRTYIGAMPGKVIQSMKKAGVRNPVFLLDEID 432
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ D++GDPSSALLEVLDPEQN F D++LD+D+DLSHV+FI TANSL I PLLDRM
Sbjct: 433 KMSMDFRGDPSSALLEVLDPEQNKTFGDHFLDMDYDLSHVMFITTANSLQGIPAPLLDRM 492
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E++ + GY EEK++IA HLI KQ+ EHG ++FS + +++ YTRESGVR LE
Sbjct: 493 EIVQLDGYTEEEKLQIACEHLINKQVKEHGLDGRGVRFSAAALREIVRRYTRESGVRDLE 552
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPS--DLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
++IAA+ RKI ++ + K+ + FLG P Y R + +GV GLAWT
Sbjct: 553 RRIAAICRKIARQMVDDSAGKEKISIGVPQVNKFLGVPSYRFGRKDQSSQSGVATGLAWT 612
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
GGEIL IE L + KLT+TG LGDVM+ESA A+ Y+R+ ELG+ ++ +
Sbjct: 613 QSGGEILMIEV-LELPGQGKLTITGKLGDVMQESAQAAMAYVRSRWQELGLEKDFYRQID 671
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
VH+HVPEGAIPKDGPSAGITM T++ SALTRR V + MTGEI LRG+VL +GG+KEK+
Sbjct: 672 VHIHVPEGAIPKDGPSAGITMATAISSALTRRPVDCNLGMTGEINLRGEVLAIGGLKEKL 731
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
LAAKR+G+ +++ +EN KD++EI + KGL V ++++VL ALLE+
Sbjct: 732 LAAKRAGLEMVLVPQENEKDLKEIPESLKKGLDICCVGHMDQVLARALLEQ 782
>gi|150388894|ref|YP_001318943.1| ATP-dependent protease La [Alkaliphilus metalliredigens QYMF]
gi|149948756|gb|ABR47284.1| ATP-dependent protease La [Alkaliphilus metalliredigens QYMF]
Length = 783
Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats.
Identities = 344/767 (44%), Positives = 519/767 (67%), Gaps = 4/767 (0%)
Query: 9 EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLY 68
++P++ LR + +FP + + VGRE+S+ + SQ++ D+ P D Y
Sbjct: 12 QLPLIPLRGLTIFPYMVLHFDVGRERSIHALEEAMVNDQLVFLASQKEADINLPSADDFY 71
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHE 128
VG +++I ++L++P T +V+G R ++ I EP+ V+ + K++E
Sbjct: 72 KVGTISKIKQMLKLPGDTIRVLVEGITRAEIKGIVKEEPYFLVEVEE-QNYQEEITKNNE 130
Query: 129 FEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLE 188
EAL+ ++ D + +E+ + P E+++S+ + P + ++N++ KQE+LE
Sbjct: 131 TEALMRSVLDSFEEYIEVSNKISP-EVLISLSEIEEPGRLADTIASNMALKPPQKQEILE 189
Query: 189 ISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNI 248
K+R L +L +E+++++++ +I + +++++K QKEY+L++Q+K IQ+ELG +
Sbjct: 190 AFNPKERLETLYRILLEEIEILQIEQTINTRVKKQINKVQKEYYLREQMKAIQKELGEDE 249
Query: 249 NDIE-VQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
N +E + R K +K E E ++E+ +L +L P + + V Y+ I+SLPW
Sbjct: 250 NVVEEADDYRQKLKKLKLPKESHEKVQREIDRLLKLSPAAAESGVIRNYIDWILSLPWNK 309
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
+KD +LK++ +LD DH+GLEKVKERI+E+LA+ ++ MK PI+CL GPPGVGKTS+
Sbjct: 310 ETKDRLDLKKSAEILDEDHYGLEKVKERILEYLAIRQLTKSMKGPIVCLVGPPGVGKTSI 369
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
KSIA SL RK+VR+SLGG+ DEAEIRGHRRTY+GA+ GRII S+++ + NP+F+LDEI
Sbjct: 370 AKSIARSLNRKFVRMSLGGVRDEAEIRGHRRTYVGAIPGRIISSMRQVESKNPLFLLDEI 429
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ D++GDP++ALLEVLDPEQN+ F D+YL++ FDLS VLFI TANSL +I RPLLDR
Sbjct: 430 DKLAGDFRGDPAAALLEVLDPEQNDDFTDHYLEMPFDLSKVLFITTANSLDTIPRPLLDR 489
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
ME+I ++GY EEKV+IA ++L+PKQL HG +KN I S++TI + + YTRESGVR+L
Sbjct: 490 MEVIRIAGYTEEEKVKIAEKYLVPKQLKVHGLKKNQINISERTIRDISNYYTRESGVRSL 549
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
E+Q+A + RKI K + + ++ P +L +LG+P Y + + G+V GLAWTS
Sbjct: 550 ERQVANLCRKIGKRVIVEKLQSVRITPRNLKKYLGSPIYRYEMINEKDEVGIVRGLAWTS 609
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
VGGE L +E + +G + KL LTG LGDVMKESA L YIR+ +EL I + +
Sbjct: 610 VGGETLSVEVTPMQG-DGKLVLTGQLGDVMKESARAGLSYIRSRVNELKIDPDFHKKIDI 668
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
H+H+PEGAIPKDGPSAGITM T+++SALT V +AMTGEITLRG+VLP+GG+KEK+L
Sbjct: 669 HIHIPEGAIPKDGPSAGITMATAMISALTNIPVSKDVAMTGEITLRGRVLPIGGVKEKVL 728
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
AA R+GI +I+L +N++D+E+I D + L F +VS+++EVL+ L
Sbjct: 729 AANRAGIKKILLPIDNKRDMEDIPDNVKRKLSFEFVSHMDEVLEHTL 775
>gi|138896216|ref|YP_001126669.1| Class III heat-shock ATP-dependent Lon protease [Geobacillus
thermodenitrificans NG80-2]
gi|134267729|gb|ABO67924.1| Class III heat-shock ATP-dependent Lon protease [Geobacillus
thermodenitrificans NG80-2]
Length = 780
Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats.
Identities = 339/769 (44%), Positives = 520/769 (67%), Gaps = 10/769 (1%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR +++FP + + + VGREKS+K + + SQ+D+ ++EPD DLY
Sbjct: 15 VPLLPLRGLLVFPTMVLHLDVGREKSVKALEQAMVEDHIILLTSQKDVAIDEPDMDDLYK 74
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G +A + ++L++P+GT +V+G R + E+ + EP+ +V+ D +KD E
Sbjct: 75 MGTIARVKQLLKLPNGTFRVLVEGIARALITEVVSEEPYFSVKVEKFAD---RASKDLED 131
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL T+ + + + L +R ++ S+ P + ++++ + KQ +LE
Sbjct: 132 EALKRTMLEYFEQYINLS-KRLSADIYASIVDIDEPGRMADIIASHLPLKLEEKQRILET 190
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG---G 246
+K+R +++ +LH E +V++L+ I + ++ M++ QKEY+L++Q+K IQ+ELG G
Sbjct: 191 IDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYLREQMKAIQKELGEKEG 250
Query: 247 NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
++E + + +AA M V ET KEL + E++ S + +V Y+ +I+LPW
Sbjct: 251 KTGEVEALKEKIEAAGM--PEHVKETALKELDRYEKIPATSAESAVIRNYLDWLIALPWS 308
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
+KD ++KRA+++L+ +H+GL+KVKER++E L+V ++ +K PI+CL GPPGVGKTS
Sbjct: 309 KETKDIHDIKRAETILNEEHYGLDKVKERVLEFLSVQQLTQSLKGPILCLAGPPGVGKTS 368
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
L +SIA++LGR++VR+SLGG+ DE+EIRGHRRTY+GAM GRIIQ +++AGT NPVF+LDE
Sbjct: 369 LARSIAKALGRRFVRMSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDE 428
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD++GDPS+A+LEVLDPEQN+ F D+Y++ +DLS V+FIATAN+L++I +PLLD
Sbjct: 429 IDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFIATANNLATIPQPLLD 488
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I + GY EK+ IA RHL+PKQL EHG +K ++ + +I YTRE+GVR
Sbjct: 489 RMEIIHIPGYTEVEKLHIAKRHLLPKQLAEHGLKKAALQVRDDAMLDIIRHYTREAGVRE 548
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE+Q+AA+ RK + + V +++ FLG +Y + + GV GLA+T
Sbjct: 549 LERQLAAICRKAARLIVSGEKKRVVVTQNNIEEFLGKRKYRYGQAEAEDQIGVATGLAYT 608
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
+ GG+ L IE SL +G KL LTG LGDVMKESA A Y+R+ ++ELGI + +
Sbjct: 609 AFGGDTLAIEVSLAKG-NGKLVLTGKLGDVMKESAQAAFSYVRSRAEELGIDPKFHETYD 667
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+H+HVPEGA+PKDGPSAGIT+ T+L+SALT + V + MTGEITLRG+VLP+GG+KEK
Sbjct: 668 IHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRVLPIGGLKEKT 727
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
L+A R+G+ +IL ++N KD+ +I D + L+F VS+++EVL AL+
Sbjct: 728 LSAHRAGLKTVILPKDNEKDLADIPDTVKRDLRFVLVSHLDEVLPHALV 776
>gi|154686956|ref|YP_001422117.1| LonA [Bacillus amyloliquefaciens FZB42]
gi|154352807|gb|ABS74886.1| LonA [Bacillus amyloliquefaciens FZB42]
Length = 774
Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats.
Identities = 346/773 (44%), Positives = 518/773 (67%), Gaps = 6/773 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
+ +P+L LR ++++P + + + VGR+KS++ + +Q+D+ ++EP D
Sbjct: 6 KRSIPLLPLRGLLVYPTMVLHLDVGRDKSVQALEQAMMHDHMIFLATQQDISIDEPGEED 65
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
++ VG +I ++L++P+GT +V+G QR + E T E + ++L+ + +KD
Sbjct: 66 IFAVGTYTKIKQMLKLPNGTIRVLVEGIQRAQILEYTELEDYTSVDIQLMHE---DDSKD 122
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E EAL+ T+ D + +++ ++ E ++ + P + ++++ + KQ++
Sbjct: 123 VEDEALMRTLLDHFDQYIKIS-KKISAETYAAVTDIEEPGRMADIVASHLPLKLKDKQDI 181
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LE + +K+R +++ +H E +V+E++ I + + M++ QKEY+L++Q+K IQ+ELG
Sbjct: 182 LETADIKERLNKVIRSIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGD 241
Query: 247 NINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
EVQ L K V ET KEL + E++ S + SV Y+ +I+LPW
Sbjct: 242 KEGKTGEVQSLTEKIEEAGMPERVKETALKELSRYEKVPSSSAESSVIRNYIDWLIALPW 301
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
++D ++K+A +LD++H GLEKVKERI+E+LAV ++ +K PI+CL GPPGVGKT
Sbjct: 302 SDETEDKLDIKKAGEILDKEHHGLEKVKERILEYLAVKQLTKTLKGPILCLAGPPGVGKT 361
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SL KSI+ S+GR++VRISLGG+ DE+EIRGHRRTY+GAM GRIIQ +++AG NPVF+LD
Sbjct: 362 SLAKSISTSMGRRFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKQNPVFLLD 421
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ SD++GDPSSA+LEVLDPEQN+ F D+Y++ FDLS VLFIATAN+L+SI PL
Sbjct: 422 EIDKMSSDFRGDPSSAMLEVLDPEQNSTFSDHYIEETFDLSKVLFIATANNLASIPGPLR 481
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I +SGY EK+EI HL+PKQ+ EHG K++++ + I +I YTRE+GVR
Sbjct: 482 DRMEIISLSGYTENEKLEIVKDHLLPKQIKEHGLTKSNLQIRDQAITDIIRYYTREAGVR 541
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
TLE+QIAA+ RK K + V +L +LG + + + GVV GLA+
Sbjct: 542 TLERQIAAICRKAAKAIVSEERKRITVTEKNLADYLGKRIFRYGQAETEDQIGVVTGLAY 601
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T+VGG+ L IE SL G+ KL LTG LGDVM+ESA A Y+R+ +++ GI + +
Sbjct: 602 TTVGGDTLSIEVSLSPGKG-KLILTGKLGDVMRESAQAAFSYVRSKAEQFGIDPKFHEKY 660
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGA+PKDGPSAGITM T+LVSALT R V+ + MTGEITLRG+VLP+GG+KEK
Sbjct: 661 DIHIHVPEGAVPKDGPSAGITMATALVSALTDRAVKREVGMTGEITLRGRVLPIGGLKEK 720
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
L A R+G+T II ++N KDIE+I + +GLKF +VS++++VL+ AL+ EK
Sbjct: 721 ALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLKFIFVSHLDDVLEHALVGEK 773
>gi|116626097|ref|YP_828253.1| ATP-dependent protease La [Solibacter usitatus Ellin6076]
gi|116229259|gb|ABJ87968.1| ATP-dependent protease La [Solibacter usitatus Ellin6076]
Length = 790
Score = 629 bits (1621), Expect = e-178, Method: Composition-based stats.
Identities = 351/782 (44%), Positives = 501/782 (64%), Gaps = 17/782 (2%)
Query: 3 EDHMQ-EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
E+H EE+P+L +R+ +++PG +PI VGR SL L++ + + VSQ D VE
Sbjct: 11 ENHATPEELPVLTVRDTVIYPGALLPITVGRPASLALVQSLGENRT-LAIVSQLDPRVES 69
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P DLY +G V + + +++P +G R E TATEPF++ RV LPDI P
Sbjct: 70 PTPEDLYQIGTVCVMHKAIKVPKDNLLLFCEGIARIRTAEFTATEPFLRARVDRLPDIEP 129
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPR---ELILSMRRNKNPMYQINFASANIST 178
+ E EAL + + + + +V P EL ++ P ++ + +
Sbjct: 130 PASA--EVEALRQNV----VSLFQQIVTASPNLSDELGINAANITEPGRLADYVAGTLPA 183
Query: 179 SIAV-KQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQI 237
+ +Q+LLE R + L +EL+++EL++ IQ + + ++ + Q+E++L++Q+
Sbjct: 184 LGHIERQKLLEELDGMVRLNEIHRHLTRELELVELRSRIQDQVQGQLSQNQREFYLREQL 243
Query: 238 KTIQEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQY 296
K IQ+ELG G+ +V+ELR K + +V +EL +L R+ P SP+Y + Y
Sbjct: 244 KAIQKELGEGDDASRDVEELRKKLESAGMKEDVKIEALRELNRLARMSPASPEYGMTRTY 303
Query: 297 VQTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICL 356
++ + +LPW V S N+KRA +LD DH+ LEKVK+RI+++LAVL++K +K PI+C
Sbjct: 304 LEWMANLPWSVSSGSQVNVKRAAEILDEDHYDLEKVKDRILDYLAVLQLKPVLKGPILCF 363
Query: 357 YGPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAG 416
G PGVGKTSLG+SIA SLGRK+ RIS+GG+HDEAEIRGHRRTYIGA+ G+I+Q+L+RAG
Sbjct: 364 VGAPGVGKTSLGRSIARSLGRKFARISMGGMHDEAEIRGHRRTYIGALPGQIVQALRRAG 423
Query: 417 TSNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANS 476
+++PVF+LDE+DK+ D++GDP+SALLEVLDPEQN+ F DNYLD+ FDLS VLFI TAN
Sbjct: 424 SNDPVFMLDEVDKLGRDFRGDPASALLEVLDPEQNSTFRDNYLDVPFDLSKVLFITTANV 483
Query: 477 LSSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFR-KNDIKFSKKTIEKLI 535
L I L DRME+I + GY +EKV IA R+LIP+Q E+G DI+F + ++
Sbjct: 484 LDPIPDALRDRMEIITLEGYTEQEKVIIAFRYLIPRQTAENGLDGTQDIEFGDDAVRHIV 543
Query: 536 DDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNG 595
YTRE+GVR LE+ I + RK + A V P + LGAPRY D +
Sbjct: 544 RRYTREAGVRNLERLIGTICRKQARRIAEGTREKMTVTPELVEKDLGAPRYRTDTEVADR 603
Query: 596 DA--GVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSD 653
+ GV +GLAWT VGG++LFIE G L +TG LG VM+ES AL ++R ++
Sbjct: 604 TSRPGVAVGLAWTPVGGDVLFIEAGRMPGGNKGLIMTGQLGPVMQESVQAALTWVRGNAT 663
Query: 654 ELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLR 713
+ GI ++F +H+HVP GAIPKDGPSAGITM T+L+S LT R+VR +AMTGEITL
Sbjct: 664 KYGIDPDLFKTSDIHIHVPAGAIPKDGPSAGITMATALLSMLTERRVRTNLAMTGEITLT 723
Query: 714 GKVLPVGGIKEKILAAKRSGITEIILCEENRKD-IEEINDIYLKGLKFHYVSNINEVLKE 772
G+VLP+GGIKEK+LAAKRSG+ E+IL EN + IE++ + ++ HYV + EV++
Sbjct: 724 GQVLPIGGIKEKVLAAKRSGVREVILPFENEVNVIEDLKSEQIDDIQLHYVKAMEEVVEL 783
Query: 773 AL 774
AL
Sbjct: 784 AL 785
>gi|126726309|ref|ZP_01742150.1| Probable ATP-dependent protease La protein [Rhodobacterales
bacterium HTCC2150]
gi|126704172|gb|EBA03264.1| Probable ATP-dependent protease La protein [Rhodobacterales
bacterium HTCC2150]
Length = 802
Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats.
Identities = 340/775 (43%), Positives = 510/775 (65%), Gaps = 7/775 (0%)
Query: 4 DHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPD 63
+ + + P+L LR++++FP + +P+ VGR+KS++ + V + SQ D V++PD
Sbjct: 4 EQLNQSYPVLPLRDIVVFPHMIVPLFVGRDKSVRALEQVMQDDKQILLSSQIDPAVDDPD 63
Query: 64 RADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGK 123
+Y +GV+A ++++L++PDGT +V+GR+R + + F + ++L +I
Sbjct: 64 AEGIYPIGVLANVLQLLKLPDGTVKVLVEGRKRVKIVDYIDNIDFFEAHAEVLEEI---D 120
Query: 124 NKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVK 183
EAL+ ++ + + + + P E + S+ + P + + ++S + K
Sbjct: 121 GDADTLEALLRSVTE-DFERYTKIKKNVPDEALASIAETREPAKLADLVAGHLSLEVDQK 179
Query: 184 QELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEE 243
QELLE + DR ++ L+ E+ V+ ++ I+ + + +M++ Q+EY+L +Q+K IQ+E
Sbjct: 180 QELLETLPVADRLEKIYGLMQGEMSVLRVEKKIKTRVKSQMERTQREYYLNEQMKAIQKE 239
Query: 244 LG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
LG G EV EL K A K+S E E E++KL+ + P S + +V Y+ +++
Sbjct: 240 LGDGEDGQNEVAELEAKVADTKFSKEAEEKVAAEIKKLKNMSPMSAEATVVRNYLDWMLA 299
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
+PWGV S+ NL A+ VLD DH+GLEKVKERI+E+LAV + +K PI+CL GPPGV
Sbjct: 300 IPWGVKSRVKKNLANAEKVLDSDHYGLEKVKERIVEYLAVQQRSAKLKGPILCLVGPPGV 359
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSLGKS+A++ GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP+
Sbjct: 360 GKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPLI 419
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
+LDEIDK+ D++GDP+SA+LEVLDPEQN+ F D+Y+++++DLS+V+F+ TANS ++
Sbjct: 420 LLDEIDKMGQDFRGDPASAMLEVLDPEQNSTFVDHYMEVEYDLSNVMFLTTANSY-NMPG 478
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRES 542
PLLDRME+I +SGY +EK EIA +HLI KQ+ HG RK +++ + + ++I YTRE+
Sbjct: 479 PLLDRMEIIPLSGYTEDEKSEIAKQHLIGKQVKNHGLRKGELEITDDALTEVIRTYTREA 538
Query: 543 GVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
GVR LE+++A + RK + KV SDL FLG R+ + GVV G
Sbjct: 539 GVRNLERELAKIARKTVTKIVRKTTDAVKVGISDLEEFLGVKRFRYGLAESEDQVGVVTG 598
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LAWTSVGGE+L IE +L + ++ TG LGDVMKES A Y+R+ S E+G+ F
Sbjct: 599 LAWTSVGGELLSIE-ALKLPGKGRMKTTGKLGDVMKESIDAASSYVRSISPEIGVKPPKF 657
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+HVHVPEGA PKDGPSAG+ MVTS+VS LT+ VR IAMTGE+TLRG LP+GG+
Sbjct: 658 ETVDIHVHVPEGATPKDGPSAGLAMVTSIVSVLTQIPVRKDIAMTGEVTLRGNALPIGGL 717
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
KEK+LAA R GI +++ EN KD+ EI D +GL VS++ EVL+ AL+ +
Sbjct: 718 KEKLLAALRGGIKTVLIPSENEKDLTEIPDNVKEGLTIIPVSHVREVLEHALVRK 772
>gi|148655742|ref|YP_001275947.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
gi|148567852|gb|ABQ89997.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
Length = 835
Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats.
Identities = 350/797 (43%), Positives = 511/797 (64%), Gaps = 39/797 (4%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P++ L N +LFP + P+ VGRE+S+ I AV+QR+ D+E+ ADLY
Sbjct: 29 LPVVPLINTVLFPHMLTPLFVGRERSVAAIEEAMSSDRMILAVAQREPDIEDVGPADLYT 88
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPD---ILPGKNKD 126
+GV A I R+L+MPDG+ + +VQG++R + E +++ R L I K
Sbjct: 89 IGVEAVIQRILKMPDGSISIVVQGQRRMRVVE------YIQDRQALHAHSVAIYENTEKT 142
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
EA++ + + K+++L P I++M ++ P + + ++ + + +QE+
Sbjct: 143 IAVEAMMRAVLSLFEKVVKLSRTLPDDAYIMAMNVSE-PGWLADLIASTLPLDVPRRQEI 201
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LE +++R RL +L +EL V+EL++ I + ++E+D+ Q+E+FL++Q+K IQ ELG
Sbjct: 202 LETLDVEERLRRLSIMLSQELDVLELESRIHTQVQKEVDRSQREFFLREQMKAIQRELG- 260
Query: 247 NINDI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
+ I E+ ELR + +EL ++E + P SP+YSV Y+ +I +P
Sbjct: 261 QTDPIQREMDELRERILAAAMPERAQAKALEELERMEMMPPASPEYSVLRTYLDWLIHVP 320
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGD-MKSPIICLYGPPGVG 363
W ++D+ +L RA + L+R+H+GL +VKERI+E +A + G +KSPIIC GPPGVG
Sbjct: 321 WSQQTEDDTDLVRAAATLERNHYGLPRVKERILEFMAARMLAGPRLKSPIICFVGPPGVG 380
Query: 364 KTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFV 423
KTSLG+SIAE+LGR++VRISLGG+HDEAEIRGHRRTYIGA+ GRII++++ AGT NPVF+
Sbjct: 381 KTSLGRSIAEALGRRFVRISLGGVHDEAEIRGHRRTYIGALPGRIIKAMKDAGTINPVFM 440
Query: 424 LDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRP 483
LDEIDK+ SD++GDP+SALLEVLDPEQN AF D+YLD+ +DLS VLFI TAN L I
Sbjct: 441 LDEIDKLGSDFRGDPASALLEVLDPEQNVAFTDHYLDLPYDLSRVLFITTANLLDPIPPA 500
Query: 484 LLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKND-------------------- 523
L DRME+I + GY EEK+EIA R L+P+QL +G +
Sbjct: 501 LRDRMEVIHLPGYTEEEKLEIARRFLVPRQLEANGLASPEYAAQSAVAAVHNRDASLENL 560
Query: 524 ----IKFSKKTIEKLIDDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVT 579
++FS + ++I YT E+GVR LE++I A+ RK+ + A + V PS L+
Sbjct: 561 PGAALRFSDSALRQIIRGYTYEAGVRNLEREIGAICRKVARRVAEGRSYAHIVHPSALMR 620
Query: 580 FLGAPRYTRDRYQGNGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKE 639
+LG PRY + + GV G++WT+ GG+++ +E SL +GR L+LTG LG+VM+E
Sbjct: 621 YLGPPRYLYGLAEQQDEIGVATGMSWTANGGDVMAVEVSLMKGR-GVLSLTGQLGEVMRE 679
Query: 640 SAVIALDYIRAHSDELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRK 699
SA AL + R++++ LGI + F +H+HVP GA+PKDGPSAGITM T+L+SA T R
Sbjct: 680 SAQAALSFARSNAETLGIKPKRFETTDIHIHVPVGAVPKDGPSAGITMATALISAFTGRP 739
Query: 700 VRAGIAMTGEITLRGKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLK 759
VR +AMTGEITLRG+VLPVGG+KEK+L A R+GI IIL N D+EE+ + L
Sbjct: 740 VRRDVAMTGEITLRGRVLPVGGVKEKVLGAHRAGIHTIILPRRNAVDLEEVPAHVKRRLN 799
Query: 760 FHYVSNINEVLKEALLE 776
F YV ++ +V++ AL E
Sbjct: 800 FVYVDHMMDVIRCALCE 816
>gi|116748161|ref|YP_844848.1| ATP-dependent protease La [Syntrophobacter fumaroxidans MPOB]
gi|116697225|gb|ABK16413.1| ATP-dependent protease La [Syntrophobacter fumaroxidans MPOB]
Length = 790
Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats.
Identities = 333/776 (42%), Positives = 503/776 (64%), Gaps = 7/776 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+K++ + E++ IL LRNM+L+P + +P+ V R +L V ++ V+QR+ + E
Sbjct: 9 LKKEGLPEKLRILPLRNMVLYPDLVLPLHVTRAGYRRLADEVYRENGLLAVVAQRNEEAE 68
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
E AD+Y VG V II++L+ DGT IV ++ L+ I+ +++ V+ +P+
Sbjct: 69 EASPADIYQVGTVGSIIKLLKQADGTYQIIVGASEKVRLRNISQAGDYLEAEVEAVPE-- 126
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
++ E EAL ++ K + L P +L + PM + +++++ S+
Sbjct: 127 -DRSTSPEIEALALNLRMGFQKFVSL--ASLPLDLANFALNAERPMQLVYAVASHLALSV 183
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
+Q +LE+ + K + + + ++L+ +EL IQ + + MDK+Q++Y+L++Q++ I
Sbjct: 184 VERQSILEMPETKAALEHVTFYMTRQLEKLELAQRIQDRVKSVMDKRQRDYYLREQLQAI 243
Query: 241 QEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQT 299
++ELG G EV EL + ++ +E EKE+ +L R+ P +P+Y V Y+
Sbjct: 244 RKELGEGEDTSEEVHELAARLRDLEMPAEARGAAEKEIERLGRMSPSAPEYHVSRNYLDW 303
Query: 300 IISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGP 359
++ +PW V ++D ++++A +LD DHF LEKVK RI+E+LAVL++K D+K PI+C GP
Sbjct: 304 LLEMPWSVSTEDRIDVRQAAVILDEDHFDLEKVKRRILEYLAVLQLKKDLKGPILCFVGP 363
Query: 360 PGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSN 419
PGVGKTSLG+SIA +LGRK++RISLGG+ DEAEIRGHRRTY+GA+ GRI+Q L+R G++N
Sbjct: 364 PGVGKTSLGQSIARTLGRKFLRISLGGVRDEAEIRGHRRTYVGALPGRIVQGLRRVGSNN 423
Query: 420 PVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSS 479
PVF+LDEIDKI D++GDPSSALLEVLDPEQN +F D+YL + FDLS V+FIAT N L +
Sbjct: 424 PVFMLDEIDKIGMDFRGDPSSALLEVLDPEQNFSFSDHYLGVPFDLSRVMFIATGNLLDT 483
Query: 480 ISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYT 539
+ L DRME+I++ GY EEK+EIA + L+ ++ HG + I+ + I ++I YT
Sbjct: 484 VPAALKDRMEVIEIPGYTAEEKLEIARKFLVERETANHGLTSDHIRIGEDAILEIIRSYT 543
Query: 540 RESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGV 599
RE+GVR+L++ +A+V R K A ++ S + LG ++ + + G+
Sbjct: 544 REAGVRSLQRNLASVCRNTAKAIAEGASGPIHIDASGIPEILGPVQFLPETATRSWGCGI 603
Query: 600 VIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQ 659
GLAWT GG+++FIET G KL LTG LG+VMKESA AL ++RAH+ +L I
Sbjct: 604 ATGLAWTPSGGQLIFIETLRTHG-NGKLLLTGQLGEVMKESATAALTFVRAHAADLEIEG 662
Query: 660 EIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPV 719
E F+ +HVHVP GA PKDGPSAG MV +L S +T R+VR +AMTGEITLRG +LPV
Sbjct: 663 EEFDRSDIHVHVPAGATPKDGPSAGAPMVVALASLMTGREVRKDVAMTGEITLRGDILPV 722
Query: 720 GGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
GGIKEK+LAA+R+G+ EI++ N KD+ +I D + + H + I++VL+ ALL
Sbjct: 723 GGIKEKVLAARRAGVKEIMIPHANMKDLADIPDHLRRDMTIHELQTISDVLQLALL 778
>gi|85860155|ref|YP_462357.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
gi|85723246|gb|ABC78189.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
Length = 790
Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats.
Identities = 348/777 (44%), Positives = 504/777 (64%), Gaps = 16/777 (2%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
+ E +PI+ + + + FP + P+ + + ++L+ K G V R E
Sbjct: 19 LPEILPIMPIFHTVAFPKMMFPMDIVGNRFIQLVDEAMAKDRLLGLVLTRKAPSAEGPLC 78
Query: 66 ---DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRV-KLLPDILP 121
DL+ VG I+++ + +VQG RF + E EP+++ RV K+ DIL
Sbjct: 79 QCEDLHRVGTCVSILKLAKQAGEKAQLVVQGLARFRIVEFLEEEPYIQARVEKIEADILI 138
Query: 122 GKNKDHEFEAL---VSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANIST 178
KD E EAL +ST+ D +K+ + P+E + + P + ++ ++
Sbjct: 139 ---KDLEIEALMANLSTLFDRVIKLSPFL----PQEFAAMAKSIQEPGDLADIIASIVNA 191
Query: 179 SIAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIK 238
S+ KQ++LE ++ R + +++ +L+++EL + IQ + +E++DK Q++++L+QQ+K
Sbjct: 192 SVEDKQKILETLDIRQRLREITLIVNHQLEILELGSKIQSQVQEDIDKSQRDFYLRQQLK 251
Query: 239 TIQEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYV 297
I+EELG + N +EV E R K + E + +EL ++ R+HP S +YSV Y+
Sbjct: 252 AIREELGESDENRVEVAEYRKKIEEKMLTEEARKEAFRELDRMSRMHPASAEYSVATTYL 311
Query: 298 QTIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLY 357
I SLPW ++DN ++++A+ +LD DH+GL+K K+RIIE+LAV K+K D K PI+C
Sbjct: 312 DWITSLPWNERTQDNQDIRQARRILDEDHYGLDKAKKRIIEYLAVRKLKPDTKGPILCFV 371
Query: 358 GPPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGT 417
GPPG GKTSL +SIA +LGRK+ RISLGG+HDEAEIRGHRRTY+GA+ GRIIQ ++RA +
Sbjct: 372 GPPGTGKTSLAQSIARALGRKFYRISLGGVHDEAEIRGHRRTYVGALPGRIIQGIRRAES 431
Query: 418 SNPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSL 477
SNPVFVLDEIDK+ SD++GDPSSALLEVLDPEQN AF D+YL + FDLSHV FI TAN L
Sbjct: 432 SNPVFVLDEIDKVGSDFRGDPSSALLEVLDPEQNFAFMDHYLGVAFDLSHVTFITTANIL 491
Query: 478 SSISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDD 537
+I L DR+E+I++ GY +EK+ IA R+LIP+Q +G IKF++ +I
Sbjct: 492 DTIPPALRDRLEVIELPGYTQDEKLRIAERYLIPRQREANGLTPEQIKFTRGAARLIISG 551
Query: 538 YTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDA 597
YTRE+GVR LE++IAAV R + + A + + + D+ +LG R D +
Sbjct: 552 YTREAGVRNLEREIAAVCRGVASQIAEGEISSALISARDIHRYLGPVRMISDARERISKP 611
Query: 598 GVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGI 657
G+ +GLAWT GG++LF+E + +GR+ LTLTG LG+VMKESA AL +IR+++ ++GI
Sbjct: 612 GIAMGLAWTPTGGDLLFVEATAMKGRK-GLTLTGQLGEVMKESASAALSFIRSNAVKIGI 670
Query: 658 SQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVL 717
+ F +H+HVP GAIPKDGPSAG+TM+ +L S LT R V+ +AMTGEITLRG VL
Sbjct: 671 PVDFFEETDIHIHVPAGAIPKDGPSAGVTMLAALASLLTNRTVKNDLAMTGEITLRGLVL 730
Query: 718 PVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
PVGGIKEK+LAA R+GI IIL + NRKD+EEI K + F +V+++ EVL AL
Sbjct: 731 PVGGIKEKVLAAHRAGIKTIILPKWNRKDLEEIPSKVRKEMNFVFVNDMREVLNIAL 787
>gi|52081303|ref|YP_080094.1| class III heat-shock ATP-dependent Lon protease [Bacillus
licheniformis ATCC 14580]
gi|52786682|ref|YP_092511.1| LonA [Bacillus licheniformis ATCC 14580]
gi|52004514|gb|AAU24456.1| class III heat-shock ATP-dependent Lon protease [Bacillus
licheniformis ATCC 14580]
gi|52349184|gb|AAU41818.1| LonA [Bacillus licheniformis DSM 13]
Length = 774
Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats.
Identities = 347/776 (44%), Positives = 517/776 (66%), Gaps = 6/776 (0%)
Query: 4 DHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPD 63
D + +P+L LR ++++P + + + VGREKS++ + +Q+D+ ++EPD
Sbjct: 3 DETKRNIPLLPLRGLLVYPTMVLHLDVGREKSVQALEQAMMNDHMIFLATQKDISIDEPD 62
Query: 64 RADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGK 123
+++ G +I ++L++P+GT +V+G QR + E + + +++ + +
Sbjct: 63 EDEIFTFGTYTKIKQMLKLPNGTIRVLVEGLQRARILEYHDLDEYTSVKIERIDE---ET 119
Query: 124 NKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVK 183
KD E EAL+ T+ D + +++ ++ E ++ + P + ++++ + K
Sbjct: 120 EKDVEDEALMRTLLDHFDQYIKIS-KKISAETFAAVTDIEEPGRMADIVASHLPLKLKDK 178
Query: 184 QELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEE 243
QE+LE +K R +++ L+H E +V+E++ I + + M++ QKEY+L++Q+K IQ+E
Sbjct: 179 QEVLETIDVKARLNKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKE 238
Query: 244 LGGNINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
LG EVQ+L K V ET KEL + E++ S + SV Y++ +IS
Sbjct: 239 LGDKEGKTGEVQKLTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLIS 298
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
LPW ++D +LK A +LD +H GLEKVKER++E+LAV K+ +K PI+CL GPPGV
Sbjct: 299 LPWNDATEDRLDLKLASQILDEEHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGV 358
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSL KSIA+SLGRK+VRISLGG+ DE+EIRGHRRTY+GAM GRIIQ +++AG +NPVF
Sbjct: 359 GKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKNNPVF 418
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
+LDEIDK+ SD++GDP+SA+LEVLDPEQN+ F D+Y++ FDLS VLFIATAN+L++I
Sbjct: 419 LLDEIDKMASDFRGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPG 478
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRES 542
PL DRME+I ++GY EKVEI HL+PKQL EHG +K++++ ++ + +I YTRE+
Sbjct: 479 PLRDRMEIITIAGYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREA 538
Query: 543 GVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
GVR LE+QIAA+ RK K + V +L +LG + + + + GVV G
Sbjct: 539 GVRNLERQIAAICRKAAKLIVSGERKRITVTDKNLEDYLGKRMFRYGQAELDDQIGVVTG 598
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LA+T+VGG+ L IE SL G+ KL LTG LGDVM+ESA A Y+R+ ++EL IS +
Sbjct: 599 LAYTTVGGDTLSIEVSLSPGK-GKLILTGKLGDVMRESAQAAFSYVRSKAEELNISPDFH 657
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+H+HVPEGA+PKDGPSAGITM T+LVSALT R V + MTGEITLRG+VLP+GG+
Sbjct: 658 EKHDIHIHVPEGAVPKDGPSAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGL 717
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
KEK L A R+G+ +I+ ++N KDIE+I + +GL F V++++EVLK AL+ E+
Sbjct: 718 KEKALGAHRAGLKTVIMPKDNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVGEE 773
>gi|154497947|ref|ZP_02036325.1| hypothetical protein BACCAP_01927 [Bacteroides capillosus ATCC
29799]
gi|150272937|gb|EDN00094.1| hypothetical protein BACCAP_01927 [Bacteroides capillosus ATCC
29799]
Length = 816
Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats.
Identities = 347/778 (44%), Positives = 499/778 (64%), Gaps = 4/778 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
+ E + MP LALR + +FP + M VGRE S+K + V+QRD+ VE
Sbjct: 16 MSEQKISAVMPALALRGLTIFPNMLMHFDVGREASIKALDEAMTNSQPIFLVAQRDLMVE 75
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P + DLY +G V+ + ++L MP +V+G R L+ +T T P+++ +V +
Sbjct: 76 NPQQNDLYTIGTVSTVRQILRMPGDNVRVMVEGVARGRLEALTQTTPYLQAQVGEIEAGE 135
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
P K EAL+ D+ EL P +++LS+ + +P Y ++ + NI
Sbjct: 136 PVKTSART-EALIRQTYDLFESYTELAPRMTP-DVLLSVMASDDPGYIADYIAQNIVMRG 193
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
KQ +LE + R +L +L +E++++EL+ S+Q K RE + + Q+++ L++Q+K I
Sbjct: 194 EDKQVILEELRPVRRLEKLQQMLRREVEILELEQSMQNKVREGLSRSQRDFVLREQLKVI 253
Query: 241 QEELGGNIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQT 299
++ELG + + D E++E R K A K +EV E KEL +LE+ S + +V Y+
Sbjct: 254 RQELGEDPDGDSEIEEYRQKIAHAKLPAEVEEKLIKELGRLEKQPFGSAEATVMRNYLDV 313
Query: 300 IISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGP 359
+ LPW +K+ ++ A+ VLD DHFGLEKVKERI+E LAV ++ D+K ++CL GP
Sbjct: 314 CLELPWNKKTKERVDVAAARKVLDGDHFGLEKVKERILEFLAVKQLAPDLKGQVLCLVGP 373
Query: 360 PGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSN 419
PGVGKTS+ S+A + RK RISLGG+HDEAEIRGHR+TY+GAM GRII ++++AG++N
Sbjct: 374 PGVGKTSIAMSVARATNRKLARISLGGVHDEAEIRGHRKTYVGAMPGRIISAIKQAGSNN 433
Query: 420 PVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSS 479
P+ +LDEIDK+ SD GDPSSALLEVLD EQN+ F DN+L++ FDLS VLFI TAN+ +
Sbjct: 434 PLLLLDEIDKLASDVHGDPSSALLEVLDGEQNSTFRDNFLELPFDLSDVLFITTANTTDT 493
Query: 480 ISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYT 539
I RPLLDRME+I+++ Y EEK++IA RHL+PK+L HG +K ++ + I ++I YT
Sbjct: 494 IPRPLLDRMEVIELTSYTDEEKLQIAKRHLLPKELKRHGLKKAQLRITDDAIREIISGYT 553
Query: 540 RESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGV 599
RESGVR LE+Q+AAV RK T+ V + V +L + LG RY ++ GV
Sbjct: 554 RESGVRVLERQLAAVCRKAAMRVVTDDVKSVSVTGDNLESLLGVRRYQPEKRPTQALVGV 613
Query: 600 VIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQ 659
V GLAWT VGGE+L +E ++ G K+ LTGNLGDVMKESA AL YIR+ + LG+
Sbjct: 614 VNGLAWTQVGGELLEVEANVVPG-SGKIELTGNLGDVMKESAHAALTYIRSRAARLGVEP 672
Query: 660 EIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPV 719
+ + +HVH PEGA+PKDGPSAGI + ++VSALT VR +AMTGEITLRG+ L +
Sbjct: 673 DFYKTKDIHVHFPEGAVPKDGPSAGIAITVAMVSALTGTPVRQDVAMTGEITLRGRALAI 732
Query: 720 GGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
GG+KEK +AA R+GI +++ +N KD+EEI+ L F + ++ L EAL +E
Sbjct: 733 GGLKEKTMAALRNGIRTVLIPADNVKDLEEIDQTVRSALHFVPIEEADQALAEALCQE 790
>gi|156743378|ref|YP_001433507.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
gi|156234706|gb|ABU59489.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
Length = 836
Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats.
Identities = 350/793 (44%), Positives = 504/793 (63%), Gaps = 32/793 (4%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P++ L N +LFP + P+ VGRE+S+ I AV+QR+ D+E+ ADLY
Sbjct: 29 LPVVPLINTVLFPHMLTPLFVGRERSVAAIEEAMSGDRTILAVAQREPDIEDVGPADLYA 88
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VGV A I R+L+MPDG+ + +VQG++R + + + I K
Sbjct: 89 VGVEAVIQRILKMPDGSISIVVQGQRRMRVVAYVQDRQVLHAQSIA---IYENTEKTIAV 145
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EA++ + + K+++L P I++M ++ P + + + + + +QE+LE
Sbjct: 146 EAMMRAVLSLFEKVVKLSRTLPDDAYIMAMNVSE-PGWLADLIVSTLPLDVPRRQEILET 204
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+++R RL +L +EL V+EL++ I + ++E+D+ Q+E+FL++Q+K IQ ELG +
Sbjct: 205 LDVEERLRRLSIMLSQELDVLELESRIHTQVQKEVDRSQREFFLREQMKAIQRELG-QTD 263
Query: 250 DI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
I E+ ELR + +EL ++E + P SP+YSV Y+ +I LPW
Sbjct: 264 PIQREMDELRERILAAAMPERAQAKALEELERMEMMPPASPEYSVLRTYLDWLIHLPWSQ 323
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGD-MKSPIICLYGPPGVGKTS 366
++D+ +L RA + L+R+H+GL +VKERI+E +A + G +KSPIIC GPPGVGKTS
Sbjct: 324 QTEDDTDLVRAAATLERNHYGLPRVKERILEFMAARMLAGSRLKSPIICFVGPPGVGKTS 383
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+SIAE+LGR++VRISLGG+HDEAEIRGHRRTYIGAM GRI+++++ AGT NPVF+LDE
Sbjct: 384 LGRSIAEALGRRFVRISLGGVHDEAEIRGHRRTYIGAMPGRIVKAMKDAGTINPVFMLDE 443
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD++GDP+SALLEVLDPEQN AF D+YLD+ +DLS VLFI TAN L I L D
Sbjct: 444 IDKLGSDFRGDPASALLEVLDPEQNVAFTDHYLDLPYDLSRVLFITTANLLDPIPPALRD 503
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKND----------------------- 523
RME+I + GY EEK+EIA R L+P+QL +G +
Sbjct: 504 RMEVIHLPGYTEEEKLEIARRFLVPRQLEANGLASPEYVAQSAIALMKDPVALSKMPGTV 563
Query: 524 IKFSKKTIEKLIDDYTRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGA 583
++FS + ++I YT E+GVR LE++I A+ RK+ + A + ++ S L +LG
Sbjct: 564 LRFSDSALRQIIRGYTYEAGVRNLEREIGAICRKVARRLAEGRNYAHIIQASALNRYLGP 623
Query: 584 PRYTRDRYQGNGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVI 643
PRY + + GV G++WT+ GG+++ +E SL +GR L+LTG LG+VM+ESA
Sbjct: 624 PRYLYGLAEQQDEVGVATGMSWTANGGDVMAVEVSLMKGRG-VLSLTGQLGEVMRESAQA 682
Query: 644 ALDYIRAHSDELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAG 703
AL + RA+++ LGI + F +H+HVP GA+PKDGPSAGITM T+L+SA T R VR
Sbjct: 683 ALSFARANAEALGIKPKRFETTDIHIHVPVGAVPKDGPSAGITMATALISAFTGRPVRRD 742
Query: 704 IAMTGEITLRGKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYV 763
+AMTGEITLRG+VLPVGGIKEK+L A R+GI IIL N D+EE+ + L F YV
Sbjct: 743 VAMTGEITLRGRVLPVGGIKEKVLGAHRAGILTIILPRRNAVDLEEVPAHVKRRLNFVYV 802
Query: 764 SNINEVLKEALLE 776
++ EV+ AL E
Sbjct: 803 DHMMEVIACALCE 815
>gi|39996889|ref|NP_952840.1| ATP-dependent protease La [Geobacter sulfurreducens PCA]
gi|39983777|gb|AAR35167.1| ATP-dependent protease La [Geobacter sulfurreducens PCA]
Length = 807
Score = 624 bits (1608), Expect = e-176, Method: Composition-based stats.
Identities = 338/774 (43%), Positives = 504/774 (65%), Gaps = 8/774 (1%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+ P+L LR++++FP + +P+ VGRE+S+ + +QR+ E+P + D+
Sbjct: 16 QRFPLLPLRDIVVFPHMVVPLFVGRERSISALEAAMNGNRMIFLAAQRNAKTEDPRQEDI 75
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y G +++II++L++PDGT +V+G+QR +L + ++ L +
Sbjct: 76 YTTGTISQIIQLLKLPDGTVKVLVEGKQRGSLVSFLPNPDYFMAEIQ---PYLESLEANP 132
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EAL+ + + + ++L + P+E++ ++ P + + +++ ++ KQ LL
Sbjct: 133 ELEALIRSTKSVFEGYVKL-TKGIPQEVVSAVGGIVEPGKLADTLAPHLNLKLSDKQLLL 191
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
I +R +LL + EL++++L+ I+ + +++M+K QKEY+L +Q++ IQ+ELG
Sbjct: 192 GIMTPHERLEKLLSFMEAELEILQLENKIRTRVKKQMEKNQKEYYLNEQMRAIQKELGTK 251
Query: 248 INDI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
+D E+ EL KA K S E + EL+KL+ + P S + +V YV ++SLPW
Sbjct: 252 -DDFRQELLELENKATKGKLSKEARQKALAELKKLKLMSPASAEAAVVRNYVDWLVSLPW 310
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
+++ ++ A+ VL+ DH+GLEKVKERI+E+L+V + +K PI+CL GPPGVGKT
Sbjct: 311 AKMTREKHDIIGAEEVLNADHYGLEKVKERILEYLSVQALVKKLKGPILCLVGPPGVGKT 370
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SL +SIA + GR +V++SLGG+ DEAEIRGHRRTY+GAM G+IIQ+L++AG++NPVF+LD
Sbjct: 371 SLARSIATATGRHFVKMSLGGMRDEAEIRGHRRTYVGAMPGKIIQNLKKAGSNNPVFLLD 430
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ SD++GDP+SALLEVLDPEQN F D++LD+++DLSHV+FIATANS SI RPLL
Sbjct: 431 EIDKMSSDFRGDPASALLEVLDPEQNAHFSDHFLDVEYDLSHVMFIATANSTHSIPRPLL 490
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I + GY EK+ IA R+L+ KQ+ +G + I S K + ++I YTRE+GVR
Sbjct: 491 DRMEVIRLEGYTEHEKLAIAERYLVGKQMAANGLSEQQISISGKAVSEIIRYYTREAGVR 550
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE+ IA + RK ++P +L FLG +Y + G GLAW
Sbjct: 551 NLERDIATLCRKAAHRVVKGEKKKIVIQPKNLSGFLGPRKYRIGTAEDKDAPGYATGLAW 610
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG++L IE ++ G KL +TG LG+VM+ESA A+ Y+R+ + LGI +E
Sbjct: 611 TEVGGDLLTIEVAIVPG-TGKLLITGKLGEVMQESAQAAMTYVRSRAQILGIDKEFHKKA 669
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGAIPKDGPSAGITM T++VSALT R VR +AMTGEITLRG VL +GG+KEK
Sbjct: 670 DIHIHVPEGAIPKDGPSAGITMATAIVSALTGRPVRHDLAMTGEITLRGNVLAIGGLKEK 729
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKV 779
+LAA R GI+ +++ EEN+KD+ EI GL +++EVL ALL E V
Sbjct: 730 LLAAGRGGISTVVIPEENKKDLAEIPREVTVGLTIVPARHMDEVLSRALLAEGV 783
>gi|56697455|ref|YP_167823.1| ATP-dependent protease La [Silicibacter pomeroyi DSS-3]
gi|56679192|gb|AAV95858.1| ATP-dependent protease La [Silicibacter pomeroyi DSS-3]
Length = 803
Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats.
Identities = 339/777 (43%), Positives = 507/777 (65%), Gaps = 11/777 (1%)
Query: 6 MQEEM----PILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
MQE + P+L LR++++FP + +P+ VGREKS++ + V ++ SQ D +++
Sbjct: 1 MQEPLNASYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMQEDKQILLSSQVDPGIDD 60
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
PD +Y GV+A ++++L++PDGT +V+G+ R + + F + R + L +I P
Sbjct: 61 PDSDGIYRTGVLANVLQLLKLPDGTVKVLVEGQARVKITGFLENDVFFEARAEYLTEI-P 119
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
G + AL+ T+ D + + + P E + ++ P + + ++ +
Sbjct: 120 GDVTTTQ--ALIRTVGD-EFERYAKVRKNIPEEALAAVGETTEPAKLADLVAGHLGIEVG 176
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
KQ+LLE + +R ++ L+ E+ V++++ I+ + + +M+K Q+EY+L +Q+K IQ
Sbjct: 177 QKQDLLETLSVSERLEKVYGLMQGEMSVLQVEKKIKTRVKSQMEKTQREYYLNEQMKAIQ 236
Query: 242 EELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
ELG G E+ EL K A K S E E E EL+KL+ + P S + +V Y+ +
Sbjct: 237 RELGDGEEGAGEIAELEDKIAATKLSKEAREKAEAELKKLKNMSPMSAEATVVRNYLDWL 296
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+S+PWGV S+ +L RA+ VLD DH+GLEKVKERI+E+LAV + +K PI+CL GPP
Sbjct: 297 LSIPWGVKSRVKKDLGRAEGVLDADHYGLEKVKERIVEYLAVQQRSAKLKGPILCLVGPP 356
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKS+A + GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP
Sbjct: 357 GVGKTSLGKSVARATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNP 416
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
+ +LDEIDK+ D++GDP+SA+LEVLDPEQNN F D+YL++++DLS+V+F+ T+NS ++
Sbjct: 417 LILLDEIDKMGQDFRGDPASAMLEVLDPEQNNTFMDHYLEVEYDLSNVMFLTTSNSY-NM 475
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PLLDRME+I ++GY EK EIA RHL+PKQ HG R + + S + +I YTR
Sbjct: 476 PGPLLDRMEIIPLAGYTEVEKREIAKRHLLPKQTKNHGLRAKEFELSDGALTDIIRYYTR 535
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+GVR LE+++A + RK + V +L FLG R+ + + GVV
Sbjct: 536 EAGVRNLEREVAKICRKALTKILKKEAEKVSVTSENLEDFLGVRRFKFGLAEKDDQIGVV 595
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWTSVGG++L IE +L + ++ TG LG+VMKES A Y+R+ + +G+
Sbjct: 596 TGLAWTSVGGDLLSIE-ALRLPGKGRMKTTGKLGEVMKESIDAAASYVRSIAPAIGVKPP 654
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
+ W +HVHVPEGA PKDGPSAGI MVTS+VS LT+ VR IAMTGE+TLRG VL +G
Sbjct: 655 RLDRWDIHVHVPEGATPKDGPSAGIAMVTSIVSVLTQTPVRKDIAMTGEVTLRGNVLAIG 714
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
G+KEK+LAA R G+ +++ EN KD+ EI D +GL V++++EVLK+AL+ +
Sbjct: 715 GLKEKLLAALRGGVKTVLIPAENEKDLPEIPDNVKEGLTIIPVAHVSEVLKQALVRQ 771
>gi|114327969|ref|YP_745126.1| ATP-dependent endopeptidase Lon [Granulibacter bethesdensis
CGDNIH1]
gi|114316143|gb|ABI62203.1| ATP-dependent endopeptidase Lon [Granulibacter bethesdensis
CGDNIH1]
Length = 810
Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats.
Identities = 350/793 (44%), Positives = 514/793 (64%), Gaps = 12/793 (1%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
E +P+L LR++++FP + +P+ VGREKS++ + V K V+Q++ ++P D+
Sbjct: 18 EMLPVLPLRDIVVFPHMIVPLFVGREKSVRALEAVMKDDKQILLVAQKNASQDDPGIDDI 77
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y +G V+ I+++L++PDGT +V+G +R + TE + + + ++L D D
Sbjct: 78 YRIGTVSTILQLLKLPDGTVKVLVEGSRRARITGFGETEAYFEAKTEILADT---GETDK 134
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EAL T+ + ++L + P E+++S+ + + P + ++++S IA KQELL
Sbjct: 135 ELEALGRTVVGQFEQYIKLNKKIAP-EVLVSVNQIEEPSKLADTVASHLSLKIAEKQELL 193
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG-G 246
EI + +R R+ + E+ V++++ I+ + + +M+K Q+EY+L +Q+K IQ+ELG G
Sbjct: 194 EIVPISERLERVFAHMESEIGVLQVEKRIRNRVKRQMEKTQREYYLNEQMKAIQKELGEG 253
Query: 247 NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
E+ EL + + + E E EL+KL + P S + +V Y+ ++ +PW
Sbjct: 254 EDGKDEIAELEERIKKTRLTKEATEKCLSELKKLRSMSPMSAEATVVRNYLDWMLGIPWK 313
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
SK +++ A+ VLD DH+GLEKVKERI+E+LAV ++ PI+CL GPPGVGKTS
Sbjct: 314 KRSKVRNDVEEAEKVLDADHYGLEKVKERILEYLAVQSRSDKLRGPILCLVGPPGVGKTS 373
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LGKSIA++ GR +VR+SLGG+ DEAE+RGHRRTYIG+M G++IQ +++A TSNP+F+LDE
Sbjct: 374 LGKSIAKATGRNFVRMSLGGVRDEAEVRGHRRTYIGSMPGKVIQGMKKAKTSNPLFLLDE 433
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD++GDPSSALLEVLDPEQN F D+YL++D+DLS V+F+ TANSL + +PLLD
Sbjct: 434 IDKLGSDWRGDPSSALLEVLDPEQNGTFADHYLEVDYDLSDVMFVTTANSL-RMPQPLLD 492
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I + GY +EKVEIA RHL+ KQ H + + ++ I LI YTRE+GVR
Sbjct: 493 RMEIIRIPGYTEDEKVEIAKRHLLQKQTEAHSLKPEEWSVTEDAIRDLIRYYTREAGVRN 552
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE++IA + RK KE T + +L + G ++ + GVV GLAWT
Sbjct: 553 LEREIAGLARKAVKEIVTKKAKKVAINRKNLEKYAGVQKFRYGEIEAEDMIGVVAGLAWT 612
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
VGGEIL IE+ L G+ + TG LGDVM+ES AL Y+R+ S GI +F
Sbjct: 613 EVGGEILTIESVLLPGK-GAIKHTGKLGDVMQESVSAALSYVRSRSASFGIKPTVFEKRD 671
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+HVHVPEGA PKDGPSAGI M TSLVS LT VR IAMTGEITLRG+VLP+GG+KEK+
Sbjct: 672 IHVHVPEGATPKDGPSAGIAMATSLVSVLTGIPVRRDIAMTGEITLRGRVLPIGGLKEKL 731
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDIY 786
LAA R+G++ + + ++N KD+ EI D K L+ VS+++EV+ +AL+ + T D
Sbjct: 732 LAALRAGLSTVFIPKDNEKDLAEIPDNVKKNLRIVPVSHVDEVIGQALVRKPEAITWD-- 789
Query: 787 SFGKKTEEEKTEK 799
+ EE T+K
Sbjct: 790 ---ESMEESVTKK 799
>gi|15605788|ref|NP_213165.1| Lon protease [Aquifex aeolicus VF5]
gi|3913992|sp|O66605|LON_AQUAE ATP-dependent protease La
gi|2982953|gb|AAC06568.1| Lon protease [Aquifex aeolicus VF5]
Length = 795
Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats.
Identities = 355/778 (45%), Positives = 519/778 (66%), Gaps = 12/778 (1%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+E P++ LR++++FP + P+ VGR S++ I KK V Q+D DVEEP D+
Sbjct: 15 KEYPLMPLRDIVIFPTMVQPLFVGRRFSIRAIEEANKKDKLIFLVLQKDKDVEEPKEEDI 74
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDI-LPGKNKD 126
Y VGVVA I+R + + D +VQG +R ++++ E +V ++ + +P +++
Sbjct: 75 YKVGVVAYILRTVPIEDARVKVLVQGLKRGVIKKLEWKEDHYVAQVDVIEERDIPPESQT 134
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E +AL+ +++ K++ L + P +L++ ++ + P + ++ + + QE+
Sbjct: 135 IEDKALIKAVKESIDKLVSLGKQIIP-DLVVLIKELEEPGKLADMVASILDIKSSQAQEI 193
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG- 245
LE ++R ++ L E+ ++E+K I RE M+K+Q+EY+L+QQ+K IQEELG
Sbjct: 194 LETFDPRERLKKVYKFLQDEIGLLEVKQRISEIARERMEKEQREYYLRQQLKAIQEELGE 253
Query: 246 -GNINDIEVQELRTKAATMK--WSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
G I E++E K +K E + EK +++LERLHP+S + V ++ ++
Sbjct: 254 AGGIK-AEIEEYTKKFEEVKECMPEEGVKEVEKNIKRLERLHPESAEAGVIRTWLDWVLD 312
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSP--IICLYGPP 360
LPW ++DN++L+RA+ +LDRDH+ LEKVK+RIIE+LA+ K+ ++P I+ GPP
Sbjct: 313 LPWCTRTEDNYDLERAREILDRDHYDLEKVKDRIIEYLAIRKLTQGKEAPTQILAFVGPP 372
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLG+SIAE+LGRK+VRI+LGG+ DEAEIRGHRRTY+GAM GRIIQ++++AGT NP
Sbjct: 373 GVGKTSLGRSIAEALGRKFVRIALGGIRDEAEIRGHRRTYVGAMPGRIIQAIKQAGTKNP 432
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
V +LDEIDK+ ++GDP++ALLEVLDPEQN F D Y+ I FDLS V+FI T N +I
Sbjct: 433 VIMLDEIDKLAISFQGDPAAALLEVLDPEQNKKFTDLYIGIPFDLSEVIFICTGNRADTI 492
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PLLDRMELI +SGY EEK+ IA +HLIPK + HGF +I+F+ + I ++I YTR
Sbjct: 493 PTPLLDRMELIMLSGYSEEEKLFIAKKHLIPKLIPLHGFSPEEIEFTDEAILEIIRGYTR 552
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+GVR L++QI+AV+RKI + + P + LG PRY +R + GV
Sbjct: 553 EAGVRNLQRQISAVLRKIAVKKLQGEKGPFNITPELVRKLLGVPRYRPER-EKKPLVGVA 611
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLAWT VGGEI+FIE + +G+ L LTG+LGD+MKESA AL YIR+ +++ GI +
Sbjct: 612 TGLAWTEVGGEIMFIEATKMKGKG-SLVLTGSLGDIMKESAQAALSYIRSKAEDYGIDPD 670
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
IF+ VHVHVPEGA+PKDGPSAG+ + T+L+S T VR +AMTGEITLRG+VLPVG
Sbjct: 671 IFSQVDVHVHVPEGAVPKDGPSAGVAIATALLSLFTDIPVRMDVAMTGEITLRGRVLPVG 730
Query: 721 GIKEKILAAKRSGITEIILCEENRKDI-EEINDIYLKGLKFHYVSNINEVLKEALLEE 777
G+KEKILAAKR+ I E+IL +N+ ++ EE+ + + + H+V N+ EV K AL+ E
Sbjct: 731 GLKEKILAAKRAEIYEVILPAKNKDEVMEELPEYVREKMTLHFVDNLEEVFKIALVRE 788
>gi|118444920|ref|YP_878860.1| ATP-dependent protease La [Clostridium novyi NT]
gi|118135376|gb|ABK62420.1| ATP-dependent protease La [Clostridium novyi NT]
Length = 771
Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats.
Identities = 337/772 (43%), Positives = 494/772 (63%), Gaps = 6/772 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
Q+ +P++ LR + +FP + + VGREKSL I G SQ++ +EEPD +
Sbjct: 5 QKVLPLIPLRGLTIFPHMVLHFDVGREKSLLAIEEAMMNGQEIFLASQKEAKIEEPDENE 64
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
+Y++G + I +VL++P T +V+G R + EPF K V +L D+ + +
Sbjct: 65 IYNIGTICNIKQVLKLPGDTVRVLVEGISRAKILTYIQEEPFFKTEVSILEDVC---SDE 121
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E EAL+ +++D + L P E+++++ +P + S+ + A KQ+L
Sbjct: 122 MECEALIRSVKDAFEDYIRLS-NNPSSEVLINIEELDDPGRFADVVSSYLILKEATKQQL 180
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
+E + +R +LL ++ E+QV+E++ I +K + ++DK QKEYFL++Q+K IQEELG
Sbjct: 181 VEAYDVNERLEKLLLIIKNEIQVLEIEKKIGLKVKNKIDKSQKEYFLKEQLKAIQEELGE 240
Query: 247 -NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
+ N E+ E K K E + EL +L+ + S + V Y+ I+ +PW
Sbjct: 241 EDENKKEIDEYAKKIKKAKLPKEAKDKALYELNRLKNIGSYSSEGGVIRTYLDWILDIPW 300
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
+KDN ++KRA+ +L+ +H+GLE VK+RIIE LAV + +K PI+CL GPPGVGKT
Sbjct: 301 NKKTKDNLDIKRARQILENEHYGLEDVKDRIIEFLAVKSVSNSLKGPILCLVGPPGVGKT 360
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
S+ +SIA +L R +VR+SLGG+ DEAEIRGHR+TY+GA+ GRI+ S++ A + NP+F+LD
Sbjct: 361 SIARSIANALNRNFVRMSLGGVRDEAEIRGHRKTYVGAIPGRIVYSMKEAKSKNPLFLLD 420
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ D++GDP+SALLEVLD EQN F D+YL++D DLS V+FI TANSL +I RPLL
Sbjct: 421 EIDKLSGDFRGDPASALLEVLDTEQNKTFRDHYLELDLDLSDVMFITTANSLDTIPRPLL 480
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME+I+VSGY EEK +IA RHLI KQL EHG I FS I K+++DYTRESGVR
Sbjct: 481 DRMEVIEVSGYTTEEKFQIAKRHLINKQLEEHGITNKKISFSDGAIYKIVEDYTRESGVR 540
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
L ++IA +RK E + + + + +LG ++ D+ GVV+G+AW
Sbjct: 541 NLNRKIATTLRKCIAEMLEKNKKSVNITANQIRKYLGPEIFSYDKADKKDRVGVVMGMAW 600
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T+ GG+ L +E ++ +G+ L LTG LGDVMKES Y+R++ + GI + + N
Sbjct: 601 TAYGGDTLPLEVTVMKGK-GTLQLTGQLGDVMKESGEAGYSYVRSNCKKYGIDPDFYKNT 659
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+H PEGA+PKDGPSAG+TM+T++VSAL+ +KV+ +AMTGEITL G+VLP+GG+KEK
Sbjct: 660 DIHIHAPEGAVPKDGPSAGVTMITAMVSALSNKKVKHNVAMTGEITLTGRVLPIGGLKEK 719
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
LAA R+GI II+ + N KD+ I L + I VL+ AL+EE
Sbjct: 720 TLAAFRAGIDTIIIPKANEKDLRNIPKSILSKINIIPAETIETVLENALVEE 771
>gi|89210983|ref|ZP_01189364.1| Peptidase S16, ATP-dependent protease La [Halothermothrix orenii H
168]
gi|89159441|gb|EAR79108.1| Peptidase S16, ATP-dependent protease La [Halothermothrix orenii H
168]
Length = 783
Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats.
Identities = 341/769 (44%), Positives = 526/769 (68%), Gaps = 4/769 (0%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
KE E+P+LA R +++FP + +P++VGREKS++ + K +SQ+D +E+
Sbjct: 8 KETEKYIELPLLASRGVVVFPHMVIPLLVGREKSIEALEKAMVKDKEIIILSQKDEKIED 67
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
PD DLY +G +AE+ +++++P+G +V+G +R + + + + + R ++L +P
Sbjct: 68 PDPEDLYTIGTIAEVKQLVKLPNGMLKVVVEGIKRARIIDFIEIDEYFEVRAEILDQTVP 127
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
D E +AL+ + + + ++ P E I+++ + P + ++++
Sbjct: 128 --EVDLEMKALMKAVLNKFQEYIKYN-RNLPSETIMTVTNIEEPARFSDTIASHLELKFR 184
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
+Q+LLE +K+R +LL ++ E+++++++ IQ K R++++K QKEY+L++Q+K I+
Sbjct: 185 QEQDLLEAISIKERLNKLLEIIKDEIEILKVEQKIQKKVRKQVEKTQKEYYLREQLKAIK 244
Query: 242 EELGGNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
EEL + D E++E R KA + ++ E +KE+ KL++ SP+ +V Y+ ++
Sbjct: 245 EELDEDEEDDEIEEYRNKAEELDLPEKIREKVDKEIEKLKKTPSMSPEATVIRNYLDCVL 304
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
LPW ++ +L A++VLD +H+GLE VKERI+E+LAV K+ KSPI+CL G PG
Sbjct: 305 DLPWNKVREEKIDLDEAKNVLDSEHYGLEDVKERILEYLAVRKLAPQKKSPILCLIGAPG 364
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLG+SIA +LGR +VR+SLGG+ DEAEIRGHRRTYIG+ GRII +++ AG+ NPV
Sbjct: 365 VGKTSLGRSIARALGRDFVRLSLGGVRDEAEIRGHRRTYIGSRPGRIINAMREAGSKNPV 424
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
F+LDE+DK+ SD++GDP++ALLEVLDPEQNN F D+YL++ FDLS VLF+ TAN I
Sbjct: 425 FLLDEVDKMSSDFRGDPAAALLEVLDPEQNNEFTDHYLELPFDLSKVLFVTTANVAYPIP 484
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
PLLDRME+I++ GY +EKVEIA RHLIP+ L EHG +++I FS +I ++I +YTRE
Sbjct: 485 APLLDRMEVIELPGYTEDEKVEIALRHLIPRILNEHGLTEDEIHFSSNSIYRIIREYTRE 544
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+GVR LE+++AA+ RK++KE +V + +LG P++ ++ Q GV
Sbjct: 545 AGVRNLERKLAAITRKVSKEIVEGRGRQARVTTQSIEKYLGVPKFKYEKAQKKDRVGVAT 604
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
G+A+T GG+IL IE ++ G+ KLTLTG+LGDVMKESA AL YIR+ +ELG+S
Sbjct: 605 GMAYTQTGGDILDIEVAVVPGKG-KLTLTGSLGDVMKESARAALSYIRSKQEELGLSDNF 663
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
+ +HVHVP+GA PKDGPSAGIT+ +++ SALT + V+ AMTGE+TLRG+VLPVGG
Sbjct: 664 HEEYDLHVHVPKGATPKDGPSAGITIASAIASALTGQPVKGKYAMTGEVTLRGRVLPVGG 723
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVL 770
IK KI+AA+R+G+ +II+ EEN+KD EEI K ++ ++V+++++VL
Sbjct: 724 IKTKIMAARRAGLKDIIMPEENKKDFEEIPVKIKKDIRVNFVNHMDQVL 772
>gi|94264385|ref|ZP_01288176.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
gi|93455214|gb|EAT05430.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
Length = 802
Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats.
Identities = 340/773 (43%), Positives = 507/773 (65%), Gaps = 5/773 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
V E + ++P++A+R++++F + +P+ VGR S+ + + V+Q+D V+
Sbjct: 15 VSERDIPAQLPVMAVRDVVVFNYMILPLFVGRPSSVGAVNEAMGRDKLIMLVAQKDSAVD 74
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
EP D+Y G+V ++R L++PDG +VQ + + T +PF+ +++L D
Sbjct: 75 EPGIDDIYRTGMVCMVMRTLKLPDGRLKVLVQAVSKARITNFTQEKPFLLADIEVLHDHE 134
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
G+ E EA++ +++ + K++ L +L++ + P + +N+ +
Sbjct: 135 IGE-LGVETEAMMRNVREQTEKILSLK-GIMSSDLMVVLNNVDEPGRLADLVVSNLQLKV 192
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
Q +LEI +R R+ LL KEL+V ++A IQ + +EEM + Q+EY+L++Q++ +
Sbjct: 193 PESQAVLEILDPVERLRRVADLLQKELEVSTVQARIQSEAKEEMGRSQREYYLREQLQAL 252
Query: 241 QEELGG-NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQT 299
++ELG + E+ ELR K + +E + K+L++LE +HP + + S+ Y+
Sbjct: 253 KKELGDVDERSQELDELRDKFKKARMPAEAKKEGLKQLKRLEMMHPDASEASIIRTYLDW 312
Query: 300 IISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGP 359
++ +PW SK +LK A+ VLD DH+GLEKVKERI+E+LAV K+ K PI+C GP
Sbjct: 313 LLEVPWRKASKARLDLKVAREVLDTDHYGLEKVKERILEYLAVRKLNKTTKGPILCFVGP 372
Query: 360 PGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSN 419
PGVGKTSLG+SIA +LGRK+ RISLGG+ DEAEIRGHRRTYIGAM GRIIQ L+ GT+N
Sbjct: 373 PGVGKTSLGQSIARALGRKFHRISLGGMRDEAEIRGHRRTYIGAMPGRIIQGLKTVGTNN 432
Query: 420 PVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSS 479
PVF++DEIDK+ SDY+GDPSSALLEVLDP QN +F D+YL++ DLS+V+FI TAN +
Sbjct: 433 PVFMMDEIDKVGSDYRGDPSSALLEVLDPAQNTSFSDHYLNLPCDLSNVMFITTANLTDT 492
Query: 480 ISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYT 539
I LLDRME+I ++GY +EEK EIA R+L+P+Q+ E+G ++ I F++ I +LI YT
Sbjct: 493 IPAALLDRMEVIRLAGYTLEEKTEIAKRYLVPRQVKENGLKEAQIDFAEDAIVRLITHYT 552
Query: 540 RESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDA-G 598
RE+G+R LE++I A+ RK+ ++ A K+ L +LG P++ + D G
Sbjct: 553 REAGLRNLEREIGALCRKVARKIAEGGKGPYKITTRTLAKYLGPPKHLPEAESERIDQPG 612
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
+ GLAWT GGE+L++E S+ +G KLTLTG LGDVMKESA AL + RA EL ++
Sbjct: 613 MATGLAWTEFGGEVLYVEVSIMKG-TGKLTLTGQLGDVMKESAQAALSFCRARLQELQLT 671
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
++ F +HVHVP GAIPKDGPSAG+TM T+L SAL+ + VR +AMTGEITLRG+VLP
Sbjct: 672 EDYFEKNDIHVHVPAGAIPKDGPSAGVTMATALYSALSSQVVRPDVAMTGEITLRGRVLP 731
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLK 771
+GG+KEK LAA R+G+ +++ ++N KD+EEI L F N++++LK
Sbjct: 732 IGGLKEKALAALRAGLDTVVIPQQNSKDLEEIPKDLRAKLNFVAARNMDDILK 784
>gi|15603843|ref|NP_246917.1| Lon [Pasteurella multocida subsp. multocida str. Pm70]
gi|12722417|gb|AAK04062.1| Lon [Pasteurella multocida subsp. multocida str. Pm70]
Length = 804
Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats.
Identities = 346/769 (44%), Positives = 509/769 (66%), Gaps = 7/769 (0%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
Q+ +P+L LR++++FP + MP+ VGR KS++ + + G VSQ+ D+EEP D
Sbjct: 8 QQSIPVLPLRDVVVFPYMVMPLFVGRPKSIRSLDEAMETGKQLLLVSQKQADLEEPTVDD 67
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKD 126
+Y VG VA II++L++PDGT +V+G+QR ++++ + +++L+ D
Sbjct: 68 VYRVGTVANIIQLLKLPDGTVKVLVEGQQRATIEQLDDNGEYFSAQIRLIETEF---GDD 124
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E E + K +L + P ++ ++ R + + +A++ ++ KQ++
Sbjct: 125 KELEVVKKATLAEFEKYAKLNKKVQP-DVHAALERIEEFDRLSDTLAAHMPVAVKHKQKV 183
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LEI+K+ R LL L+ E +++++ I+ + +E+M+K Q++Y+L +QIK IQ+ELG
Sbjct: 184 LEIAKVVARFEYLLGLMESETDLLQIEKRIRGRVKEQMEKTQRDYYLNEQIKAIQKELGE 243
Query: 247 NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
+ E+++LR K K +E E EL+KL+ + P S + +V Y+ +I +PW
Sbjct: 244 GDSADEIEQLRQKIEEAKMPAEAKSKAEAELQKLKMMSPMSAEATVVRSYIDWMIQVPWH 303
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
+K +L +AQ VLD DH+GLE+VKERI+E+LAV +K PI+CL GPPGVGKTS
Sbjct: 304 KRTKVKKDLTKAQQVLDADHYGLERVKERILEYLAVQTRLNQIKGPILCLVGPPGVGKTS 363
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+SIA++ GRKYVR++LGG+ DEAEIRGHR+TYIGA+ G++IQ + + G NP+F+LDE
Sbjct: 364 LGQSIAQATGRKYVRMALGGVRDEAEIRGHRKTYIGALPGKLIQKMAKVGVKNPLFLLDE 423
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD +GDP+SALLEVLDPEQN +F+D+YL++D+DLS V+F+AT+NS+ I PLLD
Sbjct: 424 IDKMSSDMRGDPASALLEVLDPEQNTSFNDHYLEVDYDLSDVMFVATSNSM-RIPAPLLD 482
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I +SGY +EK+ IA RHLI KQ+ +G + ++ I +I YTRE+GVR+
Sbjct: 483 RMEVIRLSGYTEDEKLNIATRHLIAKQMERNGLKAGELTIEDSAILDIIRYYTREAGVRS 542
Query: 547 LEKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE++I+ + RK K + V + KV ++L +LG R+ R G V GLAW
Sbjct: 543 LEREISKICRKAVKNLLLDKKVKSLKVNATNLHDYLGVKRFEFGRADTQNRVGEVTGLAW 602
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG++L IET+ G+ KLT TG+LGDVMKES A+ +R+ +++LGI+ +
Sbjct: 603 TEVGGDLLTIETASVLGKG-KLTYTGSLGDVMKESIQAAMTVVRSRAEKLGIASDFHEKR 661
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGA PKDGPSAGI M T+LVS LT V+A +AMTGEITLRGKVLP+GG+KEK
Sbjct: 662 DIHIHVPEGATPKDGPSAGIAMCTALVSCLTGNPVKADVAMTGEITLRGKVLPIGGLKEK 721
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
+LAA R GI +I+ +EN KD+EEI D L H V I+EVL AL
Sbjct: 722 LLAAHRGGIKTVIIPKENVKDLEEIPDNAKSNLTIHAVETIDEVLTIAL 770
>gi|119774363|ref|YP_927103.1| Endopeptidase La [Shewanella amazonensis SB2B]
gi|119766863|gb|ABL99433.1| Endopeptidase La [Shewanella amazonensis SB2B]
Length = 785
Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats.
Identities = 342/775 (44%), Positives = 511/775 (65%), Gaps = 8/775 (1%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
+E E+P+L LR+++++P + +P+ VGREKS++ + + V+QRD D++E
Sbjct: 3 QEREAHFELPVLPLRDVVVYPHMVIPLFVGREKSIRCLETAMAQDKQIMLVAQRDADLDE 62
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P D+++VG +A I+++L++PDGT +V+G +R + T EPF GR++ LP
Sbjct: 63 PGADDIFEVGTIASILQLLKLPDGTVKVLVEGGRRARVARYTQEEPFFIGRIEELPS--- 119
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+D E E LV + ++L + PP E++ SM + +A++ +
Sbjct: 120 APLEDKEEEVLVRSAIAQFEGYIKLNKKIPP-EVLTSMSGIDEAARLADTMAAHMPLKLE 178
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
KQ +LE+ + +R L+ ++ E+ +++++ I+ + +++M+K Q+EY+L +Q+K IQ
Sbjct: 179 DKQSVLEMVNVGERLEYLMAMMEGEIDLLQVEKRIRSRVKKQMEKSQREYYLNEQMKAIQ 238
Query: 242 EELGG-NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG + E + L K K ++ + + EL KL + P S + +V YV +
Sbjct: 239 KELGDLDEGHDEFETLNRKIEEAKMPADAKDKAQAELNKLRMMSPMSAEATVVRSYVDWM 298
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
S+PW SK +L +A+ VL+ DH+GLEKVKERI+E+LAV +K PI+CL GPP
Sbjct: 299 TSVPWFERSKIKRDLSKAEQVLNADHYGLEKVKERILEYLAVQTRVKQLKGPILCLVGPP 358
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLG+SIA++ GRKYVR++LGG+ DEAEIRGHRRTYIG+M G+IIQ + + G NP
Sbjct: 359 GVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKIIQKMAKVGVKNP 418
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
+F+LDEIDK+ SD +GDP+SALLEVLDPEQN F+D+YL++D+DLS V+F+AT+NS+ I
Sbjct: 419 LFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSNSM-DI 477
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PLLDRME+I +SGY +EK+ IA +HL+PKQ+ +G + +I I +I YTR
Sbjct: 478 PGPLLDRMEVIRLSGYTEDEKLNIAKQHLLPKQVERNGLKPQEISVDDGAILGIIRYYTR 537
Query: 541 ESGVRTLEKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGV 599
E+GVR LE++++ + RK+ K+ + V V +L +FLG R+ + + N G
Sbjct: 538 EAGVRALERELSKICRKVVKQILLDKAVKHVDVTGENLKSFLGVQRHDYGKAESNNQVGQ 597
Query: 600 VIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQ 659
V GLAWT VGG++L IE + G+ KLT TG+LGDVM+ES A+ +RA +++LGI+
Sbjct: 598 VTGLAWTQVGGDLLTIEATSVAGKG-KLTYTGSLGDVMQESIQAAMTVVRARAEQLGINP 656
Query: 660 EIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPV 719
+ + +HVHVPEGA PKDGPSAG M T+LVS LT VRA +AMTGEITLRG+VLP+
Sbjct: 657 DFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSTLTGNPVRADVAMTGEITLRGEVLPI 716
Query: 720 GGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
GG+KEK+LAA R GI +++ +EN +D+EEI + L+ H V ++EVLK AL
Sbjct: 717 GGLKEKLLAAHRGGIKHVLIPKENERDLEEIPANVVADLQIHPVRWVDEVLKLAL 771
>gi|148259930|ref|YP_001234057.1| ATP-dependent protease La [Acidiphilium cryptum JF-5]
gi|146401611|gb|ABQ30138.1| ATP-dependent protease La [Acidiphilium cryptum JF-5]
Length = 813
Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats.
Identities = 346/771 (44%), Positives = 505/771 (65%), Gaps = 7/771 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
E + +L LR++++FP + +P+ VGREKS++ + V K V+Q++ ++P D+
Sbjct: 21 ETLAVLPLRDIVVFPHMIVPLFVGREKSVRALEGVMKDDKQILLVAQKNAQQDDPSANDI 80
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
YDVG ++ ++++L +PDGT +V+G +R + + + + + L +I+ G
Sbjct: 81 YDVGTISTVLQLLRLPDGTVKVLVEGVRRARITKFHEVDSHFEVTAQPLDEIVTGGK--- 137
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E E L + + ++L + P E+++S+ + +P + ++++ IA KQELL
Sbjct: 138 ELEGLARGVVSQFEQYIKLNKKIAP-EVLVSINQIDDPSKLADTIASHLGLKIADKQELL 196
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG-G 246
E + +R R+ + E+ V++++ I+ + + +M+K Q+EY+L +Q+K IQ+ELG G
Sbjct: 197 ETGSVTERLERVFAHMEAEIGVLQVEKRIRNRVKRQMEKTQREYYLNEQLKAIQKELGEG 256
Query: 247 NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
E EL K T K S E + EL+KL + P S + +V Y+ ++ +PW
Sbjct: 257 EEGKDETAELEEKIRTTKLSKEARDKAMAELKKLRTMSPMSAEATVVRNYLDWLLGIPWK 316
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
+K ++ A+ VLD DH+GL+KVKERIIE+LAV +K PI+CL GPPGVGKTS
Sbjct: 317 KRAKIKNDVIEAERVLDADHYGLDKVKERIIEYLAVQSRSPKLKGPILCLVGPPGVGKTS 376
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LGKSIA++ GR +VR+SLGG+ DEAEIRGHRRTYIG+M G+IIQ +++A TSNP+F+LDE
Sbjct: 377 LGKSIAKATGRNFVRMSLGGMRDEAEIRGHRRTYIGSMPGKIIQGMKKAKTSNPLFLLDE 436
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ +D++GDP+SALLEVLDPEQN F+D+YL++D+DLS V+F+ TANSL + +PLLD
Sbjct: 437 IDKLGADWRGDPTSALLEVLDPEQNGTFNDHYLEVDYDLSDVMFVTTANSL-RMPQPLLD 495
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I + GY +EK+EIA RHLI KQ HG + + S + +LI YTRE+GVR
Sbjct: 496 RMEIIRIPGYTEDEKIEIAKRHLIGKQAEAHGLKDGEWSVSDDAVRELIRTYTREAGVRN 555
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE++IA + RK KE T V + ++ F G PR+ + GVV GLAWT
Sbjct: 556 LEREIANLARKAVKEIVTKKVTKVAITKKNIEKFAGVPRFRFGETEAEDMVGVVTGLAWT 615
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
VGGEIL IE+ L G+ + TG LGDVM+ES A+ YIR+ + GI IF
Sbjct: 616 EVGGEILTIESVLLPGKG-NVKQTGKLGDVMQESVSAAISYIRSRAISFGIKPPIFEKRD 674
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
+HVHVPEGA PKDGPSAGI M TS+VS LT VR IAMTGEITLRG+VLP+GG+KEK+
Sbjct: 675 IHVHVPEGATPKDGPSAGIAMATSIVSVLTGIPVRKDIAMTGEITLRGRVLPIGGLKEKL 734
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
LAA R+GIT +++ ++N+KD+ EI + K LK VS+++EV+ EAL+ +
Sbjct: 735 LAALRAGITTVLIPKDNQKDLAEIPENVKKSLKIIPVSHVDEVIAEALVRK 785
>gi|77360984|ref|YP_340559.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas haloplanktis TAC125]
gi|76875895|emb|CAI87116.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas haloplanktis TAC125]
Length = 786
Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats.
Identities = 343/770 (44%), Positives = 514/770 (66%), Gaps = 10/770 (1%)
Query: 9 EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLY 68
E+P+LALR+++++P + +P+ VGREKS+K + K V+Q+D V+EP++ D+Y
Sbjct: 10 EIPVLALRDVVVYPHMVIPLFVGREKSIKCLEAAMDKDKQIFLVAQKDATVDEPEQDDIY 69
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHE 128
VG +A ++++L++PDGT +V+G QR ++E +E F + I +HE
Sbjct: 70 RVGTIATVLQLLKLPDGTVKVLVEGTQRAKIEEFIDSEEFFVANAQF---IESESIDEHE 126
Query: 129 FEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLE 188
+ + + ++L + PP E++ S+ +P + +A++ + KQ++LE
Sbjct: 127 QDVFIRSAISQFEGYVKLNKKIPP-EVLTSVSGIDDPARLADTMAAHMPLKVPEKQKVLE 185
Query: 189 ISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNI 248
S + +R L+ L+ E+ +++++ I+ + +++M+K Q+EY+L +Q+K IQ+ELG +
Sbjct: 186 TSSVTERLEYLMALMEGEIDLLQVEKKIRSRVKKQMEKSQREYYLNEQMKAIQKELG-EL 244
Query: 249 NDI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
+D+ E + L+ + +E E EL KL+ + P S + SV Y+ T+IS+PW
Sbjct: 245 DDVPDEFEALKKRIEESGMPTEAKEKATAELSKLKMMSPMSAEASVVRSYIDTLISVPWK 304
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
SK +L AQ +LD DH+GLEKVKERI+E+LAV + +K PI+CL GPPGVGKTS
Sbjct: 305 KRSKVKKDLAGAQKILDSDHYGLEKVKERILEYLAVQQRTNKLKGPILCLVGPPGVGKTS 364
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LG+SIA S GRKY+R++LGG+ DEAEIRGHRRTYIG+M G++IQ++ + G NP+F+LDE
Sbjct: 365 LGQSIARSTGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKMIQNMTKVGVKNPLFLLDE 424
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD +GDP+SALLEVLDPEQN+ F D+YL++D+DLS V+F+AT+NS +I PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNSHFADHYLEVDYDLSDVMFVATSNSF-NIPGPLLD 483
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I +SGY +EK+ IA +HLI KQ+ +G ++++I+ + I +I YTRE+GVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLITKQVKRNGLKEHEIEIADSAITGIIRYYTREAGVRN 543
Query: 547 LEKQIAAVIRKITKEAATNVVHTT-KVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE++I+ + RK K TT ++ +L FLG R+ + + G V GLAW
Sbjct: 544 LEREISKLCRKAVKNILIEKDTTTVTIDEHNLEDFLGVQRFDYGKAEDGDRIGQVTGLAW 603
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG++L IE + G+ KL+ TG+LGDVM+ES A+ +R ++E I+ + +
Sbjct: 604 TEVGGDLLTIECAAVPGKG-KLSYTGSLGDVMQESIQAAMTVVRNRAEEFRINSDFYEKR 662
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+HVHVPEGA PKDGPSAG MVT LVS+LT VRA +AMTGEITLRG+VLP+GG+KEK
Sbjct: 663 DIHVHVPEGATPKDGPSAGAAMVTGLVSSLTGNPVRADVAMTGEITLRGEVLPIGGLKEK 722
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
+LAA R GI +I+ + N +D++EI D L GL H V+ I+EVLK AL+
Sbjct: 723 LLAAHRGGIKTVIIPKINERDLKEIPDNVLAGLDIHPVTWIDEVLKLALV 772
>gi|126741376|ref|ZP_01757051.1| ATP-dependent protease La [Roseobacter sp. SK209-2-6]
gi|126717542|gb|EBA14269.1| ATP-dependent protease La [Roseobacter sp. SK209-2-6]
Length = 805
Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats.
Identities = 343/776 (44%), Positives = 509/776 (65%), Gaps = 7/776 (0%)
Query: 3 EDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEP 62
++ + P+L LR++++FP + +P+ VGREKS++ + V SQ D +EP
Sbjct: 2 KEPLNSSYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMADDKQILLSSQIDPAEDEP 61
Query: 63 DRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPG 122
+Y GV+A ++++L++PDGT +V+G R + E + + + R + L +I PG
Sbjct: 62 QADGIYQAGVLANVLQLLKLPDGTVKVLVEGSARVEITEFLENDDYFEARAEYLSEI-PG 120
Query: 123 KNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAV 182
EALV T+ D + + + P E + ++ P + + ++ +
Sbjct: 121 DVT--TIEALVRTVGD-EFERYAKVRKNIPEEALSAVGETTEPAKLADLVAGHLGIEVDR 177
Query: 183 KQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQE 242
KQELLE + +R ++ L+ E+ V++++ I+ + + +M+K Q+EY+L +Q+K IQ+
Sbjct: 178 KQELLETLSVSERLEKVYGLMQGEMSVLQVEKKIKTRVKSQMEKTQREYYLNEQMKAIQK 237
Query: 243 ELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
ELG G EV EL K A K S E E + EL+KL+ + P S + +V Y+ ++
Sbjct: 238 ELGDGEEGAGEVAELEEKIAATKLSKEAREKADAELKKLKNMSPMSAEATVVRNYLDWML 297
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
S+PWG S+ +L RA+ +LD DH+GLEKVKERI+E+LAV + +K PI+CL GPPG
Sbjct: 298 SIPWGTKSRVKKDLGRAEEILDADHYGLEKVKERIVEYLAVQQRSAKLKGPILCLVGPPG 357
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLGKS+A++ GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP+
Sbjct: 358 VGKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPL 417
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
+LDEIDK+ D++GDP+SA+LEVLDPEQN+ F D+YL++++DLS+V+F+ T+NS ++
Sbjct: 418 ILLDEIDKMGQDFRGDPASAMLEVLDPEQNSTFVDHYLEVEYDLSNVMFLTTSNSY-NMP 476
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
PLLDRME+I +SGY +EK EIA +HL+ KQ+ HG + + + + + + +I YTRE
Sbjct: 477 GPLLDRMEIIPLSGYTEDEKREIAKQHLVSKQVKNHGLKAKEFELTDEALTDIIRVYTRE 536
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+GVR LE++IA V RK + T V P +L FLG ++ + GVV
Sbjct: 537 AGVRNLEREIAKVARKSLTKIIKKEAETVSVTPENLDDFLGVAKFRYGLAEKEDQVGVVT 596
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLA+TSVGGE+L IE +L + ++ TG LGDVMKES A Y+R+ S +LGI
Sbjct: 597 GLAYTSVGGELLSIE-ALRLPGKGRMKTTGKLGDVMKESIEAASSYVRSVSPKLGIKPPR 655
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F+ W +HVHVPEGA PKDGPSAG+ MVTS+VS LT+ VR IAMTGE+TLRG L +GG
Sbjct: 656 FDKWDIHVHVPEGATPKDGPSAGLAMVTSIVSVLTQIPVRKDIAMTGEVTLRGNALAIGG 715
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
+KEK+LAA R GI +++ EEN KD+ EI D +GL+ VS+++EVLK AL+E+
Sbjct: 716 LKEKLLAALRGGIKTVLIPEENAKDLPEIPDNVKEGLEIITVSHVSEVLKHALVEQ 771
>gi|118738920|ref|ZP_01586999.1| ATP-dependent protease La [Dinoroseobacter shibae DFL 12]
gi|118671830|gb|EAV78406.1| ATP-dependent protease La [Dinoroseobacter shibae DFL 12]
Length = 802
Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats.
Identities = 344/779 (44%), Positives = 511/779 (65%), Gaps = 19/779 (2%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
+ + P+L LR++++FP + +P+ VGREKS++ + V K SQ D V++P
Sbjct: 5 LNQYYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMKDDKQILLSSQIDPAVDDPTPE 64
Query: 66 DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLL------PDI 119
++ GVVA ++++L++PDGT +V+GRQR A+ E T E F + +LL PD
Sbjct: 65 GIFAYGVVANVLQLLKLPDGTVKVLVEGRQRVAITEYTDNEDFFEAHAELLEEEAGDPDT 124
Query: 120 LPGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTS 179
L ALV ++ + + + P E + ++ + P + S ++
Sbjct: 125 L---------RALVGSVS-AEFERYAKIKKNVPEEALAAVAESTEPAKLADMVSGHLGIE 174
Query: 180 IAVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKT 239
+ KQELLE + +R ++ L+ E+ V++++ I+ + + +M++ Q+EY+L +Q+K
Sbjct: 175 VGRKQELLETLSVAERLEKVYGLMQGEMSVLQVEKKIKSRVKSQMERTQREYYLNEQMKA 234
Query: 240 IQEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQ 298
IQ+ELG G EV EL + A K S E E E E++KL+ + P S + +V Y+
Sbjct: 235 IQKELGDGEDGANEVAELENRIAETKLSKEAREKAEGEIKKLKNMSPMSAEATVVRNYLD 294
Query: 299 TIISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYG 358
++S+PWG S+ +L RAQ +LD DH+GLEKVKERI+E+LAV + +K PI+CL G
Sbjct: 295 WMLSIPWGTKSRVKKDLGRAQKILDTDHYGLEKVKERIVEYLAVQQRSKKLKGPILCLVG 354
Query: 359 PPGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTS 418
PPGVGKTSLGKS+A++ GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+
Sbjct: 355 PPGVGKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTT 414
Query: 419 NPVFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
NP+ +LDEIDK+ D++GDP+SA+LEVLDPEQN F D+YL++++DLS+V+F+ TANS
Sbjct: 415 NPLILLDEIDKMGQDFRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSY- 473
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
++ PLLDRME+I ++GY +EK EIA +HLI KQ+ HG ++++ + + ++++I Y
Sbjct: 474 NMPGPLLDRMEIIPLAGYTEDEKAEIAKQHLISKQVKNHGLKRDEFSLTDEALQEIIRRY 533
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAG 598
TRE+GVR LE++IA + RK + +V L LG R+ + G
Sbjct: 534 TREAGVRNLEREIAKLARKAVTKIVRKEADKVEVTAESLEDMLGVKRFKYGLAEEEDQIG 593
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
VV GLAWTSVGG++L IE +L + ++ TG LGDVMKES A ++R+ S ++G+
Sbjct: 594 VVTGLAWTSVGGDLLSIE-ALRLPGKGRMKTTGKLGDVMKESIDAAASFVRSISPQIGVK 652
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
F+ W +HVHVPEGA PKDGPSAGI MVTS+VS LT+ V+ IAMTGE+TLRG VLP
Sbjct: 653 PPRFDKWDIHVHVPEGATPKDGPSAGIAMVTSIVSVLTQIPVKRDIAMTGEVTLRGNVLP 712
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
+GG+KEK+LAA R GIT +++ EN KD+ EI D +GL VS+++EVLK AL+ E
Sbjct: 713 IGGLKEKLLAALRGGITTVLIPAENEKDLPEIPDNVKEGLTIIPVSHVSEVLKVALVSE 771
>gi|99080616|ref|YP_612770.1| ATP-dependent protease La [Silicibacter sp. TM1040]
gi|99036896|gb|ABF63508.1| ATP-dependent protease La [Silicibacter sp. TM1040]
Length = 802
Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats.
Identities = 340/776 (43%), Positives = 507/776 (65%), Gaps = 7/776 (0%)
Query: 3 EDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEP 62
++ + P+L LR++++FP + +P+ VGREKS+ + V SQ D ++P
Sbjct: 2 QEPLNSSYPVLPLRDIVVFPHMIVPLFVGREKSVHALEEVMSDDKQILLSSQIDPSEDDP 61
Query: 63 DRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPG 122
D+ +Y GV+A ++++L++PDGT +V+G QR + E E F + R + L + +PG
Sbjct: 62 DQDGIYRTGVLANVLQLLKLPDGTVKVLVEGHQRVKITEFLDNETFFEARAEALSE-MPG 120
Query: 123 KNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAV 182
E AL+ + D + + + P E + ++ P + + ++ +
Sbjct: 121 DVTTTE--ALLRAVGD-EFERYAKVRKNIPEEALTAVGETTEPAKLADLVAGHLGIEVER 177
Query: 183 KQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQE 242
KQELLE + +R ++ L+ EL V++++ I+ + + +M+K Q+EY+L +Q+K IQ+
Sbjct: 178 KQELLETLPISERLEKVYALMQSELSVLQVEKKIKTRVKTQMEKTQREYYLNEQMKAIQK 237
Query: 243 ELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
ELG G E+ EL K K S E E + E++KL+ + P S + +V Y+ ++
Sbjct: 238 ELGDGEDGAGEIAELEEKIEGTKLSKEAREKADAEIKKLKNMSPMSAEATVVRNYLDWML 297
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
S+PWG S+ +L RAQ +LD+DH+GLEKVKERI+E+LAV + +K PI+CL GPPG
Sbjct: 298 SIPWGTKSRVKKDLGRAQDILDKDHYGLEKVKERIVEYLAVQQRSAKLKGPILCLVGPPG 357
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLGKS+A++ GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP+
Sbjct: 358 VGKTSLGKSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPL 417
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
+LDEIDK+ D++GDP+SA+LEVLDPEQN+ F D+YL++++DLS+V+F+ T+NS ++
Sbjct: 418 ILLDEIDKMGQDFRGDPASAMLEVLDPEQNSTFVDHYLEVEYDLSNVMFLTTSNSY-NMP 476
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
PLLDRME+I +SGY +EK EI+ +HLI KQ+ HG + + + + + + ++I YTRE
Sbjct: 477 GPLLDRMEIIPLSGYTEDEKREISKQHLISKQVKNHGLKAKEFELTDEALTEIIRTYTRE 536
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+GVR LE++IA V RK + KV P +L FLG +Y + GVV
Sbjct: 537 AGVRNLEREIAKVARKALTSIVKKETESVKVTPENLGDFLGVAKYRYGLAELEDQVGVVT 596
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLA+TSVGGE+L IE +L + ++ TG LGDVMKES A Y+R+ S LGI
Sbjct: 597 GLAYTSVGGELLSIE-ALRLPGKGRMKTTGKLGDVMKESIEAASSYVRSVSPRLGIKPPR 655
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F+ W +HVHVPEGA PKDGPSAG+ MVTS+VS LT VR IAMTGE+TLRG L +GG
Sbjct: 656 FDKWDIHVHVPEGATPKDGPSAGLAMVTSIVSVLTGIPVRKDIAMTGEVTLRGNALAIGG 715
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
+KEK+LAA R GI +++ +EN KD+ EI D +GL+ V +++EVLK AL+ +
Sbjct: 716 LKEKLLAALRGGIKTVLIPKENEKDLPEIPDNVKEGLEIIPVDHVSEVLKHALVSQ 771
>gi|110599105|ref|ZP_01387346.1| ATP-dependent protease La [Geobacter sp. FRC-32]
gi|110550100|gb|EAT63285.1| ATP-dependent protease La [Geobacter sp. FRC-32]
Length = 809
Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats.
Identities = 339/795 (42%), Positives = 515/795 (64%), Gaps = 12/795 (1%)
Query: 11 PILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYDV 70
P+ LR+M++FP + +P+ VGREKS+ + Y +Q++ VE+P + ++Y
Sbjct: 19 PLFPLRDMVIFPHMVVPLFVGREKSIHALEAAMNGNKYIFLATQKNAKVEDPKQDEIYST 78
Query: 71 GVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEFE 130
G + II++L++PDGT +V+G++R + + + V D+ NK + E
Sbjct: 79 GTICHIIQLLKLPDGTVKVLVEGKKRGTILSYLNCDGYFTVEVA---DVSETSNKTAKLE 135
Query: 131 ALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEIS 190
ALV I+ S + + + P E+ + P + + +++ I KQ+LL ++
Sbjct: 136 ALVRGIRS-SFERYVKLTKTIPAEVTNVVSGISEPSRLADSIATHLNLKITDKQDLLSLA 194
Query: 191 KMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIND 250
R +LL + E+++++++ I + +++M+K QK+Y+L +Q++ IQ+ELG N ++
Sbjct: 195 DPLKRLEKLLVFMESEIEILQIENRIHSRVKKQMEKAQKDYYLNEQMRAIQKELG-NKDE 253
Query: 251 I--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
E+ EL K A K EV+E EL+KL+ + P S + +V Y+ ++S+PW
Sbjct: 254 FKQELAELEKKIARQKMPVEVSEKALSELKKLKSMSPASAEAAVIRNYLDWLLSVPWTES 313
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
S +N ++ A+SVLD DHFGLEKVKERI+E+LAV + +K PIICL GPPGVGKTSL
Sbjct: 314 SAENKDIATAESVLDADHFGLEKVKERILEYLAVTSLVA-LKGPIICLVGPPGVGKTSLV 372
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
KSIA + GRK++++SLGG+ DEAEIRGHRRTY+GAM G+IIQS++RAGT NPVF+LDEID
Sbjct: 373 KSIARATGRKFIKMSLGGVRDEAEIRGHRRTYVGAMPGKIIQSMKRAGTINPVFLLDEID 432
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ +D++GDP+SALLEVLDPEQN F D++LD+D+DLS V+F+ TANSL SI RPLLDR+
Sbjct: 433 KMSTDFRGDPASALLEVLDPEQNFTFTDHFLDVDYDLSRVMFVTTANSLHSIPRPLLDRL 492
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I + GY+ EK+ IA ++L+ KQL HG + + F+ K I ++I YTRE+GVR LE
Sbjct: 493 EVIRLDGYLEMEKLAIAKQYLVKKQLAAHGLEEKNATFTDKAILEIIRHYTREAGVRNLE 552
Query: 549 KQIAAVIRKITKEAATNVVHTTK---VEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
++IA + RK +K + ++ FLG PR+ + GVV GLAW
Sbjct: 553 REIANICRKTAHALVKGKNSRSKKISISDREIKNFLGVPRFRYGMGEETDSIGVVTGLAW 612
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG++L IE + G+ K+ +TG LG+VM+ESA A+ Y+R+ + LG+ + + N
Sbjct: 613 TEVGGDLLKIEVATLPGKG-KMIITGKLGEVMQESAQAAMTYVRSRALMLGLEPDFYQNL 671
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
+H+HVPEGAIPKDGPSAGITM T+++SALT + V IAMTGEITL G+VL +GG+KEK
Sbjct: 672 DIHIHVPEGAIPKDGPSAGITMATAIISALTNKAVLNSIAMTGEITLLGRVLAIGGLKEK 731
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDI 785
ILAA+R I ++++ +N KD+ E+ + GL+ V ++++V+ A + ++ D
Sbjct: 732 ILAARRGLIKKVLIPLDNEKDLVEMPKELIAGLEIRSVKHMDDVILNAFVSSPLVAKADS 791
Query: 786 YSFGKKTEEEKTEKV 800
+S + ++EKV
Sbjct: 792 FSDAGGMMKSQSEKV 806
>gi|16079872|ref|NP_390698.1| class III heat-shock ATP-dependent Lon protease [Bacillus subtilis
subsp. subtilis str. 168]
gi|585415|sp|P37945|LON1_BACSU ATP-dependent protease La 1
gi|496557|emb|CAA53984.1| protease La [Bacillus subtilis]
gi|1770078|emb|CAA99540.1| ATP-dependent Lon protease [Bacillus subtilis]
gi|2635285|emb|CAB14780.1| class III heat-shock ATP-dependent Lon protease [Bacillus subtilis
subsp. subtilis str. 168]
Length = 774
Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats.
Identities = 343/776 (44%), Positives = 516/776 (66%), Gaps = 6/776 (0%)
Query: 4 DHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPD 63
+ ++ +P+L LR ++++P + + + VGR+KS++ + +Q+D+ ++EP
Sbjct: 3 EELKRSIPLLPLRGLLVYPTMVLHLDVGRDKSVQALEQAMMHDHMIFLATQQDISIDEPG 62
Query: 64 RADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGK 123
+++ VG +I ++L++P+GT +V+G +R + + E + ++L+ +
Sbjct: 63 EDEIFTVGTYTKIKQMLKLPNGTIRVLVEGLKRAHIVKYNEHEDYTSVDIQLIHE---DD 119
Query: 124 NKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVK 183
+KD E EAL+ T+ D + +++ ++ E ++ + P + ++++ + K
Sbjct: 120 SKDTEDEALMRTLLDHFDQYIKIS-KKISAETYAAVTDIEEPGRMADIVASHLPLKLKDK 178
Query: 184 QELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEE 243
Q++LE + +KDR +++ ++ E +V+E++ I + + M++ QKEY+L++Q+K IQ+E
Sbjct: 179 QDILETADVKDRLNKVIDFINNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKE 238
Query: 244 LGGNINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
LG EVQ L K V ET KEL + E++ S + SV Y+ +++
Sbjct: 239 LGDKEGKTGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVA 298
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
LPW + D +LK A +LD +H GLEKVKERI+E+LAV K+ +K PI+CL GPPGV
Sbjct: 299 LPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGV 358
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSL KSIA+SLGRK+VRISLGG+ DE+EIRGHRRTY+GAM GRIIQ +++AG NPVF
Sbjct: 359 GKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKLNPVF 418
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
+LDEIDK+ SD++GDPSSA+LEVLDPEQN++F D+Y++ FDLS VLFIATAN+L++I
Sbjct: 419 LLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPG 478
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRES 542
PL DRME+I+++GY EK+EI HL+PKQ+ EHG +K++++ + I +I YTRE+
Sbjct: 479 PLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREA 538
Query: 543 GVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
GVR+LE+Q+AA+ RK K V +L F+G + + + GVV G
Sbjct: 539 GVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTG 598
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LA+T+VGG+ L IE SL G+ KL LTG LGDVM+ESA A Y+R+ ++ELGI +
Sbjct: 599 LAYTTVGGDTLSIEVSLSPGK-GKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFH 657
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+ +H+HVPEGA+PKDGPSAGITM T+LVSALT R V + MTGEITLRG+VLP+GG+
Sbjct: 658 EKYDIHIHVPEGAVPKDGPSAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGL 717
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
KEK L A R+G+T II ++N KDIE+I + +GL F S+++EVL+ AL+ EK
Sbjct: 718 KEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALVGEK 773
>gi|89901777|ref|YP_524248.1| ATP-dependent protease La [Rhodoferax ferrireducens T118]
gi|89346514|gb|ABD70717.1| ATP-dependent protease La [Rhodoferax ferrireducens DSM 15236]
Length = 797
Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats.
Identities = 339/769 (44%), Positives = 487/769 (63%), Gaps = 6/769 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+ + I+ +RNM+LFPG+ +PI +GR S+ +Y K G + QR+ DVE P DL
Sbjct: 26 DALVIIPVRNMVLFPGMVVPISIGRSSSIAAAQYAVKNDQAVGILMQRNPDVETPGADDL 85
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
VG +A I+R + PDGT + QG+QRF + F R++ + + N
Sbjct: 86 SSVGTIASILRYVTTPDGTHHIVCQGQQRFRVTGYLEGFAFTVARIERIAEAAAPDNP-- 143
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EA +++ ++++++ M+ + P E++ +++ P + + + KQE+L
Sbjct: 144 EIEARFMRLKERAVEVLQ-MLPQVPAEMVHAVQGIDTPATLADLVAGYVDIKATEKQEIL 202
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
E ++ R R+L +L + V+ L I +T+ + ++++E+ L++Q+K+IQ+ELG +
Sbjct: 203 EEIDLRRRLDRVLDMLVHRIDVLNLSRDIDKRTKASLGQREREFLLREQLKSIQKELGED 262
Query: 248 I--NDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
N E++ELR EVA+ KEL++LER+ S +YS+ Y+ +I +PW
Sbjct: 263 ASGNAAEIEELRNLIEEAHMPEEVAKQAAKELKRLERMADGSAEYSMVRTYLDWLIEVPW 322
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
D ++ +A+ VLD DHF LEKVK+RI+E LAV K+K PI+CL GPPGVGKT
Sbjct: 323 KAPEPDTIDVGQARRVLDADHFDLEKVKKRILEFLAVRKLKPSGHGPILCLVGPPGVGKT 382
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
SLG+SIA +LGRK+VR+SLGG+HDEAEIRGHRRTY+GA+ G IIQ+L++AGT V +LD
Sbjct: 383 SLGQSIARALGRKFVRVSLGGVHDEAEIRGHRRTYVGALPGNIIQALKKAGTRGCVMMLD 442
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
EIDK+ S +GDPS+ALLEVLDPEQNN+F DNYL + +DLS VLFI TAN L + PL
Sbjct: 443 EIDKLGSGIQGDPSAALLEVLDPEQNNSFRDNYLAVPYDLSQVLFITTANVLDPVPGPLR 502
Query: 486 DRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVR 545
DRME++ ++GY EEK EIA R+L+ +QL + G + + + + +I DYTRE+GVR
Sbjct: 503 DRMEVLHLAGYTQEEKREIARRYLVTRQLEDSGLKPEQLAITDDALAAIIRDYTREAGVR 562
Query: 546 TLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAW 605
LE+QI AV R+ A + T +V+ DLV LG ++ + G GV GLAW
Sbjct: 563 NLERQIGAVCRRTAVRIAEGEIQTARVDAPDLVEVLGPAKFENEVALRAGMPGVATGLAW 622
Query: 606 TSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNW 665
T VGG+ILFIE S G +L LTG LGDVMKESA AL +++ + G+
Sbjct: 623 TPVGGDILFIEASRTAG-TGRLILTGQLGDVMKESAQAALTLVKSRAATFGLDPATLEKV 681
Query: 666 QVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEK 725
VH+HVP GAIPKDGPSAG+ M +L S R VR+ +AMTGEI+LRG VLPVGGIKEK
Sbjct: 682 DVHIHVPAGAIPKDGPSAGVAMFIALASLFMNRPVRSDVAMTGEISLRGLVLPVGGIKEK 741
Query: 726 ILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
+LAA +GI +++L NRKD+EE+ + L+F Y+ +I+E + A+
Sbjct: 742 MLAALAAGIKKVMLPARNRKDLEEVPLPARQQLEFVYLDDIDEAVLAAI 790
>gi|114777028|ref|ZP_01452048.1| ATP-dependent protease La [Mariprofundus ferrooxydans PV-1]
gi|114552549|gb|EAU55009.1| ATP-dependent protease La [Mariprofundus ferrooxydans PV-1]
Length = 808
Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats.
Identities = 337/766 (43%), Positives = 518/766 (67%), Gaps = 7/766 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR++++FP + +P+ VGREKS+K + V G ++Q+D +++P DLY
Sbjct: 30 LPVLPLRDIVVFPCMIVPLFVGREKSVKALEKVMASGKKVLLLAQKDAALDDPQGDDLYH 89
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G + ++++L++PDGT +V+G R A+Q I A ++ +P + P ++ E
Sbjct: 90 IGTIGNVLQLLKLPDGTIKVLVEGGDRVAVQSIHADADYLTA--SYVPLLAP-VDQPPEL 146
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+A+ ++ ++L + PP E+++S+ + + +++++ + KQ LLE+
Sbjct: 147 DAVAHSLVQKFEAYVKLNKKLPP-EVMVSVSAVEEADKLADTIASHLNLKVEEKQALLEM 205
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+ DR RL + +E++++++ I+ + + +M+K Q++Y+L +Q+K IQ+ELG
Sbjct: 206 PAVMDRLERLYAHMEEEMELLQVDKRIRSRVKRQMEKSQRDYYLSEQMKAIQKELGDEDG 265
Query: 250 DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFS 309
+ ++Q+L K S E A E EL++L+ + P S + +V Y+ ++ +PW S
Sbjct: 266 EGDLQQLEEKIKQAGMSKEAAAKAEAELKRLKMMPPMSSEATVVRNYLDWLVDVPWSKRS 325
Query: 310 KDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGK 369
+ + +L A++VL+ DH+GLEKVKER++EHLAVL + MK PI+C GPPGVGKTSL +
Sbjct: 326 RVSRDLAVAEAVLEADHYGLEKVKERVLEHLAVLSLVRRMKGPILCFVGPPGVGKTSLAR 385
Query: 370 SIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDK 429
SIA + R+YVR+SLGG+ DEAEIRGHRRTYIG+M G++IQSL++ GT NP+ +LDEIDK
Sbjct: 386 SIARATRRRYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQSLKKVGTKNPLILLDEIDK 445
Query: 430 IDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRME 489
+ SD++GDPSSALLEVLDPEQN++F+D+Y+++D+DLS V+FI TANSL +I PLLDRME
Sbjct: 446 LGSDFRGDPSSALLEVLDPEQNHSFNDHYMEVDYDLSEVMFITTANSL-NIPGPLLDRME 504
Query: 490 LIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEK 549
+I +SGY +EK+EIA R+L+ KQ +HG + ++ + +LI YTRE+GVR L +
Sbjct: 505 IIRISGYTEQEKLEIAKRYLLTKQRSDHGLKDAQLQMDDDAVLELIRYYTREAGVRGLSR 564
Query: 550 QIAAVIRKITKE-AATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
++A + RK+ ++ + T + D+ +LG +Y + GVV GLAWT V
Sbjct: 565 ELARLCRKVARKLVQSGENETMTLHAGDIEAYLGVRKYRFGLAEEEDQIGVVTGLAWTEV 624
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GGE+L IET+L G+ KLT+TG LGDVM+ES AL Y+R+ + +LG+ + +H
Sbjct: 625 GGELLQIETALMPGKG-KLTVTGQLGDVMQESIQAALTYVRSRAPQLGLKPDFHQKVDIH 683
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
VHVPEGAIPKDGPSAG+ M TS+VSALT VR + MTGEITLRGK LP+GG+KEK+LA
Sbjct: 684 VHVPEGAIPKDGPSAGLGMATSIVSALTGIPVRKNVCMTGEITLRGKALPIGGLKEKLLA 743
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
A R G+T ++ EEN KD++EI+ LKG++ H VS++++VL+ AL
Sbjct: 744 AHRGGLTVAVIPEENIKDLKEIHPDVLKGIEVHAVSHMDQVLEHAL 789
>gi|42525077|ref|NP_970457.1| ATP-dependent protease LA [Bdellovibrio bacteriovorus HD100]
gi|39577288|emb|CAE81111.1| ATP-dependent protease LA [Bdellovibrio bacteriovorus HD100]
Length = 831
Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats.
Identities = 337/799 (42%), Positives = 508/799 (63%), Gaps = 37/799 (4%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+++P+L LR++I+FP + MP+ VGREKS+ + K +Q+D P+ D+
Sbjct: 7 QQLPLLPLRDLIIFPHMMMPLFVGREKSINALEEAMSKQTDIVLAAQKDAKTNNPEPKDI 66
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
+ +G V II++L +PDGT +V+G++R ++ + F V+ L +
Sbjct: 67 FAIGTVGTIIQLLRLPDGTVKVLVEGKRRVKIKNFVNNDNFFTVAVEALDE---DPTNIV 123
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E +ALV +++ ++L PP E+++ + +NP + A ++ + KQ +L
Sbjct: 124 EAQALVRSVKGTFETYVKLNKRIPP-EILMRVSTIENPGELADIIVAQLNLKLEDKQTVL 182
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGN 247
EI R LL L+ E++++E++ I+ + +++M++ QKEY+L +Q++ IQ+ELG
Sbjct: 183 EIIDPSKRLEHLLNLMTGEIEILEVEKKIRTRVKKQMERSQKEYYLNEQMQAIQKELGEK 242
Query: 248 IN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
+ E+Q+L K K S E + KE++KL+ + P S + +V Y+ ++SLPW
Sbjct: 243 DDYQAELQDLEIKTKNKKMSQEAKDKVMKEIKKLKMMSPMSAEATVVRNYIDWVLSLPWA 302
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
++++ ++K AQ +LD DH+GLEKVK+RI+E+LAVL + DMK PI+CL GPPGVGKTS
Sbjct: 303 DYTEEKHDIKNAQRILDDDHWGLEKVKDRILEYLAVLSISKDMKGPILCLAGPPGVGKTS 362
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
L +SIAESL R + RISLGG+ DEAEIRGHR+TY+GAM G+I+Q+L++ NP+ +LDE
Sbjct: 363 LARSIAESLNRPFARISLGGVRDEAEIRGHRKTYVGAMPGKILQALRKVDKGNPLVLLDE 422
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ +D++GDP++A+LEVLDPEQNN F D+YL++++DLS V+FIATANSL +I RPLLD
Sbjct: 423 IDKMANDFRGDPAAAMLEVLDPEQNNNFQDHYLELEYDLSKVMFIATANSLHTIPRPLLD 482
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME+I++ GYI +EK IA +L+PKQL HG + + TI +I YTRE+GVR
Sbjct: 483 RMEIINLEGYIEQEKFHIAKNYLVPKQLENHGLKDYKVTIKDDTIRDVIRYYTREAGVRN 542
Query: 547 LEKQIAAVIRKITKEAATN-------------------------VVHTTK------VEPS 575
LE+Q A V RK+ K+ N +TK V P
Sbjct: 543 LERQFANVARKVAKDIVMNETLENFKAEAKTDKKAVAAKKGAKTAKTSTKKNEGYVVTPQ 602
Query: 576 DLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGD 635
LV LG +Y + + G+ G+AWT VGG++L +E S+ G+ K T+TG LGD
Sbjct: 603 KLVELLGPHKYKFGMIETENEIGLTNGMAWTEVGGDLLAVEVSVVPGKG-KFTVTGQLGD 661
Query: 636 VMKESAVIALDYIRAHSDELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSAL 695
VMKES A+ Y+R+ G+ +E F+N VH+H+PEGA+PKDGPSAGI + TS+VSA+
Sbjct: 662 VMKESCAAAMSYVRSRGPLFGLDKEYFSNIDVHIHLPEGAVPKDGPSAGIALTTSIVSAI 721
Query: 696 TRRKVRAGIAMTGEITLRGKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYL 755
+ V+ +AMTGE++LRG+V+ +GG+KEKILAA R GI II +EN KD+++I +
Sbjct: 722 MKVPVKRTVAMTGEVSLRGRVMAIGGLKEKILAAHRGGIKLIICPKENEKDLKDIPKDVM 781
Query: 756 KGLKFHYVSNINEVLKEAL 774
K LK V ++++VL AL
Sbjct: 782 KDLKVILVDHVDQVLINAL 800
>gi|126653684|ref|ZP_01725603.1| LonA [Bacillus sp. B14905]
gi|126589721|gb|EAZ83856.1| LonA [Bacillus sp. B14905]
Length = 784
Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats.
Identities = 347/766 (45%), Positives = 498/766 (65%), Gaps = 6/766 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR +++FP + + I VGR +S+ + + V+Q++M E+P+ DLY
Sbjct: 20 VPLLPLRGLLVFPSMVLHIDVGRNRSVAALEQAMLEDQMILLVTQKEMHDEQPEEQDLYA 79
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G +A + ++L++P+GT +V+G R + + A E F + + D+L KD E
Sbjct: 80 IGTMAYVKQMLKLPNGTLRILVEGVARASWKNYRALENFTFVDIDVKEDLL---GKDVET 136
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+AL+ T+ K + + E I ++ + P + ++++ IA KQE+LE+
Sbjct: 137 QALMRTLLTYFEKYAK-SSNKITAETINTVADIEEPGRLADIIASHLPFKIADKQEVLEM 195
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+K R L+ LH E +V++L+ I K ++ M++ QKEY+L++Q+K IQ ELG
Sbjct: 196 LNVKKRLDHLIIRLHDEQEVLDLEKKINSKVKQSMERTQKEYYLREQMKAIQTELGDREG 255
Query: 250 DI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
EV ELR E KEL + E++ S + V Y+ +ISLPW
Sbjct: 256 KTGEVAELRKSIDASGMPESTKEVALKELDRYEKIPGASAESGVIRNYIDWLISLPWTKA 315
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D N+ A+++L+RDH GLEKVKER++E+LAV ++K ++ PI+CL GPPGVGKTSL
Sbjct: 316 TEDRMNIDHAENILNRDHDGLEKVKERVLEYLAVRQLKNSLRGPILCLAGPPGVGKTSLA 375
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIAESL RK++RISLGG+ DE+EIRGHRRTY+GAM GRIIQ +++AGT NPVF+LDEID
Sbjct: 376 RSIAESLDRKFIRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDEID 435
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ +D++GDP++A+LEVLDP QNN F D+Y++ +DLS+VLFIATAN LSSI PLLDRM
Sbjct: 436 KMSNDFRGDPAAAMLEVLDPAQNNTFSDHYIEETYDLSNVLFIATANDLSSIPGPLLDRM 495
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I ++GY EK +I HLIPKQL EHG +K+ + + + +I YTRE+GVR LE
Sbjct: 496 EVISIAGYTEIEKAQITNNHLIPKQLKEHGLKKSQVIIKDEAVIDIIRYYTREAGVRGLE 555
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
+QIA + RKI K + V + LG R+ + + GV GLA+T+V
Sbjct: 556 RQIATLCRKIAKIIVSGEKKRVTVNSKSIQELLGKHRFRYGQAEKENQVGVATGLAYTTV 615
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GG+ L IE SL G+ KL LTG LGDVMKESA AL Y+R ++L + E F+ +H
Sbjct: 616 GGDTLQIEVSLTPGKG-KLQLTGKLGDVMKESAQTALSYVRTKMEKLQVDPEYFDTHDIH 674
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+HVPEGA+PKDGPSAGITM T++VSA+ R +R + MTGEITLRG+VLP+GG+KEK L+
Sbjct: 675 IHVPEGAVPKDGPSAGITMATAIVSAILNRPIRREVGMTGEITLRGRVLPIGGLKEKTLS 734
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
A R+G+T II ++N +DIE+I D + L F VS+ +EVL AL
Sbjct: 735 AHRAGLTTIICPQDNERDIEDIPDSVREQLTFKLVSSADEVLAYAL 780
>gi|152968974|ref|YP_001334083.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150953823|gb|ABR75853.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 784
Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats.
Identities = 341/774 (44%), Positives = 512/774 (66%), Gaps = 14/774 (1%)
Query: 9 EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLY 68
E+P+L LR+++++P + +P+ VGREKS++ + V+Q++ +EP DL+
Sbjct: 10 EIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLF 69
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLL--PDILPGKNKD 126
VG VA I+++L++PDGT +V+G QR + ++ + + L P I +
Sbjct: 70 TVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLDSPAI-----DE 124
Query: 127 HEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
E E LV T ++L + PP E++ S+ +P + +A++ +A KQ +
Sbjct: 125 REQEVLVRTAISQFEGYIKLNKKIPP-EVLTSLNSIDDPARLADTIAAHMPLKLADKQSV 183
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LE+S + +R L+ ++ E+ +++++ I+ + +++M+K Q+EY+L +Q+K IQ+ELG
Sbjct: 184 LEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELG- 242
Query: 247 NINDI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
++D E + L+ K K E E E EL+KL+ + P S + +V Y+ ++ +P
Sbjct: 243 EMDDAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVP 302
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGK 364
W SK +L++AQ +LD DH+GLE+VK+RI+E+LAV +K PI+CL GPPGVGK
Sbjct: 303 WNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGK 362
Query: 365 TSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVL 424
TSLG+SIA++ GRKYVR++LGG+ DEAEIRGHRRTYIG+M G++IQ + + G NP+F+L
Sbjct: 363 TSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLL 422
Query: 425 DEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPL 484
DEIDK+ SD +GDP+SALLEVLDPEQN AF+D+YL++D+DLS V+F+AT+NS+ +I PL
Sbjct: 423 DEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSM-NIPAPL 481
Query: 485 LDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGV 544
LDRME+I +SGY +EK+ IA RHL+PKQ+ + +K ++ I +I YTRE+GV
Sbjct: 482 LDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGV 541
Query: 545 RTLEKQIAAVIRKITKEAATN-VVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGL 603
R+LE++I+ + RK K+ + + ++ +L +LG R+ R G V GL
Sbjct: 542 RSLEREISKLCRKAVKQLLLDKSLKHIEINGENLHDYLGVQRFDYGRADSENRVGQVTGL 601
Query: 604 AWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFN 663
AWT VGG++L IET+ G+ KLT TG+LG+VM+ES AL +R+ +D+LGI+ + +
Sbjct: 602 AWTEVGGDLLTIETACVPGK-GKLTYTGSLGEVMQESIQAALTVVRSRADKLGINADFYE 660
Query: 664 NWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIK 723
+HVHVPEGA PKDGPSAGI M T+LVS LT VRA +AMTGEITLRG+VLP+GG+K
Sbjct: 661 KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK 720
Query: 724 EKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
EK+LAA R GI +++ +EN++D+EEI D + L H V I EVL AL E
Sbjct: 721 EKLLAAHRGGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNE 774
>gi|42525197|ref|NP_970577.1| ATP-dependent protease La [Bdellovibrio bacteriovorus HD100]
gi|39577408|emb|CAE81231.1| ATP-dependent protease La [Bdellovibrio bacteriovorus HD100]
Length = 801
Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats.
Identities = 336/768 (43%), Positives = 500/768 (65%), Gaps = 4/768 (0%)
Query: 8 EEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADL 67
+ +P+L +R++++FP + +P+ VGR+ S++ + K SQ+D+ E P ++
Sbjct: 12 QTLPMLPVRDIVVFPYMIIPLFVGRDASIRSVEEALAKNRLIFLASQKDITEENPSPDNI 71
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
Y VG VA I+R+ ++ DG ++QG + ++ T T P + V+ + + P +
Sbjct: 72 YTVGTVAMIMRMRKLSDGRVKILIQGVAKGRVKNFTKTSPSFEVAVEKIEET-PVQKTVV 130
Query: 128 EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELL 187
E EAL+ T ++ +++ L P +++L + +P + ++N+ + Q++L
Sbjct: 131 ENEALIRTAKEHIERIIALGRPLSP-DILLVLDDVSDPGRIADLIASNLGIKVQDAQKVL 189
Query: 188 EISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG-G 246
E S +R + +L EL+VM+ ++ + +++M K Q+EYFL++Q+K I+ ELG G
Sbjct: 190 ETSDATERLKLVNEILAAELEVMQTQSKNRTGAKDDMSKSQREYFLREQMKAIKNELGEG 249
Query: 247 NINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWG 306
+ E+ ELR K + V K+L +LER+HP + + ++ Y+ + LPW
Sbjct: 250 DSKSEEMDELREKLVNAGMPTHVEAEALKQLGRLERMHPDASEATMVRTYLDWMADLPWS 309
Query: 307 VFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTS 366
S+D+ +LKR++ +LD DH+ LEK K+RI+E LAV K+K ++K PI+C GPPGVGKTS
Sbjct: 310 KKSEDHIDLKRSKEILDEDHYELEKAKDRIMEFLAVRKLKPNLKGPILCFGGPPGVGKTS 369
Query: 367 LGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDE 426
LGKSIA ++GR+Y RI+LGG+ DEAEIRGHRRTY+GAM G+IIQ+L++A TSNPV VLDE
Sbjct: 370 LGKSIARAMGREYFRIALGGVKDEAEIRGHRRTYVGAMPGKIIQALRQAKTSNPVIVLDE 429
Query: 427 IDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLD 486
IDK+ SD++GDPS+A+LEVLDPEQN F DNYL++DFDLS+VLFIATAN L +I L D
Sbjct: 430 IDKLGSDFRGDPSAAMLEVLDPEQNATFRDNYLNVDFDLSNVLFIATANVLENIPPALRD 489
Query: 487 RMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRT 546
RME++++ GY +K+ I +HLI +Q+ +G + +IKF+ + I+ LI YTRE+G+R
Sbjct: 490 RMEILNIPGYTENDKLLITKKHLIKRQIEANGITEENIKFTDEGIKYLIAGYTREAGLRN 549
Query: 547 LEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWT 606
LE+++ +V RK+ K + +V + + LG PR+ RD + GVV GLAWT
Sbjct: 550 LEREVGSVCRKVAKMVVMEETNFVEVNATTVPELLGPPRFQRDDKIADSQVGVVQGLAWT 609
Query: 607 SVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQ 666
GGE+L IE +G+ L LTG LGDVMKESA A+ Y RAH +ELGI ++ F +
Sbjct: 610 QAGGEVLTIEALKMKGKG-HLALTGQLGDVMKESAHAAMSYARAHQEELGIPEDFFEKYD 668
Query: 667 VHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKI 726
VHVH+P GAIPKDGPSAGIT+ T+LVS +T VR IAMTGE+TL+G+VLPVGGI+EK
Sbjct: 669 VHVHLPAGAIPKDGPSAGITLTTALVSLMTGTPVRHDIAMTGEVTLQGRVLPVGGIREKC 728
Query: 727 LAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
LAA GIT II+ +KD+ +I ++ + F N++EV A
Sbjct: 729 LAALNLGITNIIIPMACQKDLADIPKVFKDKINFILAENLDEVFAVAF 776
>gi|77917645|ref|YP_355460.1| ATP-dependent protease La [Pelobacter carbinolicus DSM 2380]
gi|77543728|gb|ABA87290.1| ATP-dependent protease La [Pelobacter carbinolicus DSM 2380]
Length = 780
Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats.
Identities = 320/776 (41%), Positives = 513/776 (66%), Gaps = 6/776 (0%)
Query: 1 VKEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVE 60
V++ + E +P+L +R+ ++FP + +P+ +GR +SL + Q+++ E
Sbjct: 5 VRDFELPEALPLLPVRDAVIFPHMILPLYIGRSQSLAAVEQALAGDRLIMLACQKELGQE 64
Query: 61 EPDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDIL 120
P D+Y G V I+R +++PDG + +VQG + + ++ P+ + + D++
Sbjct: 65 TPTAEDIYAFGCVGMIMRSVKLPDGRSKILVQGLGKAHVVHYLSSVPYFAVTTEAVEDLV 124
Query: 121 PGKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSI 180
+ EAL+ ++++ L + M E++++M ++P + + ++N+ +
Sbjct: 125 --VESSMQTEALMRSVRE-QLTELHGMGRSFSNEVLVAMENIEDPGHLADVVASNLGLKV 181
Query: 181 AVKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTI 240
AV Q LLE + R +++ LL +E +++ ++ IQ + REEM Q+EYFL++Q++ I
Sbjct: 182 AVVQPLLEENDPIRRLHKVQELLLRETELINVQQRIQTQAREEMGSSQREYFLREQLRAI 241
Query: 241 QEELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQT 299
Q ELG + ++ ELR + K ++V + K+LR+LE + ++ +Y++ Y++
Sbjct: 242 QSELGEADAKAEDLLELRAQIDKAKLPADVGKEAHKQLRRLETMPVEAAEYAMLRTYLEW 301
Query: 300 IISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGP 359
+ LPW ++D+ +L A+++LD DH+ L+KVKERI+E LAV K+K + P++C GP
Sbjct: 302 LADLPWQKSTRDSIDLAAARAILDEDHYDLDKVKERILEFLAVCKLKKKLNGPVLCFVGP 361
Query: 360 PGVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSN 419
PGVGKTSLGKSIA +LGRK+VR+SLGGL DEAEIRGHRRTY+GA+ GRI+QS+++AG++N
Sbjct: 362 PGVGKTSLGKSIARALGRKFVRVSLGGLRDEAEIRGHRRTYVGALPGRILQSMKQAGSNN 421
Query: 420 PVFVLDEIDKI-DSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLS 478
PVF+LDE+DK+ +D++GDPS+ALLE+LDPEQN+AF D+Y+++ FDLS V+F+ATAN L
Sbjct: 422 PVFMLDELDKVGGADFRGDPSAALLELLDPEQNHAFSDHYINLPFDLSKVMFVATANVLD 481
Query: 479 SISRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDY 538
S+ L DR+E+I ++GY E+K+ IA R+LIP+QL +G +++D+ S+ + K+I +Y
Sbjct: 482 SVPSALRDRLEVIRLAGYSTEQKLAIARRYLIPRQLEANGLQESDLAISRNALLKVIGEY 541
Query: 539 TRESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAG 598
T E+G+R LE+++ + RK+ + A N + +V L ++LG RY + + G
Sbjct: 542 TAEAGLRNLERELGGICRKVARRRAENDLRPVRVTSGTLASYLGPSRYLDEDKLEEHEVG 601
Query: 599 VVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGIS 658
VV GLAWT VGG+IL +E S+ G +L LTG LGDVMKESA AL Y RAH+ + GI
Sbjct: 602 VVTGLAWTEVGGQILHVEASIMPG-SGQLHLTGQLGDVMKESAQAALSYARAHAGQWGID 660
Query: 659 QEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLP 718
+ + + +H+HVP GAIPKDGPSAG+T++T+LVS L++R V +AMTGEITLRG+VLP
Sbjct: 661 PDFYKSLDIHIHVPAGAIPKDGPSAGVTIMTALVSILSQRPVNREVAMTGEITLRGQVLP 720
Query: 719 VGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
+GG+KEK+LAA R+G+ ++L N+KD+ ++ + L + + +VL AL
Sbjct: 721 IGGVKEKLLAAVRAGMQTVVLPRRNQKDLADVPAGLRRRLALVFADRVEDVLAVAL 776
>gi|114797553|ref|YP_759702.1| ATP-dependent protease La [Hyphomonas neptunium ATCC 15444]
gi|114737727|gb|ABI75852.1| ATP-dependent protease La [Hyphomonas neptunium ATCC 15444]
Length = 806
Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats.
Identities = 337/770 (43%), Positives = 509/770 (66%), Gaps = 12/770 (1%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR++++FP + P+ VGR+KS++ + +++ V+Q+D V+ P +DL+
Sbjct: 7 VPVLPLRDIVVFPDMVAPLFVGRDKSVRALEMIDESDNEIMLVAQKDAAVDNPVTSDLHA 66
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
G +A I+++L++PDGT +V+GR R L + + + V+ +P+ +
Sbjct: 67 TGTLATILQLLKLPDGTVKVLVEGRSRARLVALHDRAEYFEAEVEAIPE---ADASGADV 123
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+AL+ +Q+ ++L + PP E + ++ + +P + ++N+S ++ KQELLE+
Sbjct: 124 QALMRAVQEQFENYVKLNRKIPP-EAVTTISQLTDPGRLADQVASNLSVKLSDKQELLEM 182
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG---- 245
++KDR ++ L+ E+ +++++ I+ + + +M+K Q+EY+L +Q+K IQ ELG
Sbjct: 183 PEVKDRLEKVFSLMEGEMGMLQMERKIKNRVKRQMEKTQREYYLNEQMKAIQRELGDSGG 242
Query: 246 -GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
G D E+ EL K A S E E E++KL ++ P S + +V Y+ I+SLP
Sbjct: 243 EGGERD-ELAELDQKIADTPLSQEARTKAEAEMKKLRQMSPMSAESTVVRNYLDWILSLP 301
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGK 364
WG +L +A+ LD DH+GL+KVKERI+E+LAV K G +K PI+CL GPPGVGK
Sbjct: 302 WGKRKDIETDLLKAEKQLDDDHYGLDKVKERILEYLAVQKRTGRLKGPILCLVGPPGVGK 361
Query: 365 TSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVL 424
TSLG+SIAE+ GR +VR+SLGG+ DE+EIRGHRRTYIG+M GR+IQSL++ + NP+F+L
Sbjct: 362 TSLGRSIAEATGRDFVRVSLGGVRDESEIRGHRRTYIGSMPGRVIQSLKKTKSGNPLFLL 421
Query: 425 DEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPL 484
DEIDK+ D++GDP+SALLEVLDPEQN+ F+D+YL++D+DLS V+F+ TANSL ++ +PL
Sbjct: 422 DEIDKMGMDHRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDVMFVTTANSL-NMPQPL 480
Query: 485 LDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGV 544
LDRME+I ++GY EEK+EI RHLIP+ +HG R ++ + + I LI Y+RE+GV
Sbjct: 481 LDRMEIIRIAGYTEEEKLEITKRHLIPQVREDHGLRDDEWIVTDEAIRDLIRYYSREAGV 540
Query: 545 RTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLA 604
R+L+++++ + RK +E AT + ++ +L + G ++ G V GLA
Sbjct: 541 RSLKREVSRLARKAVREIATGEHTSLTIDSDNLAKYAGVRKHRYGLADETDQVGAVTGLA 600
Query: 605 WTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNN 664
WT VGG++L IE GR + +TGNL DVMKES A +RA S +LGI +FN
Sbjct: 601 WTEVGGDLLTIEAVKMPGRG-AMKVTGNLRDVMKESISAASSLVRARSVDLGIKPTVFNT 659
Query: 665 WQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKE 724
+HVHVP+GA PKDGPSAG M T++VS LT V +AMTGEI+LRG+VLP+GG+KE
Sbjct: 660 TDIHVHVPDGATPKDGPSAGAAMTTAIVSLLTGIPVNREVAMTGEISLRGRVLPIGGLKE 719
Query: 725 KILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
K+LAA R GI +++ +EN KD++EI D G+K VS+I EVLK AL
Sbjct: 720 KLLAALRGGIKTVLIPKENEKDLDEIPDNVKTGMKIIPVSDIQEVLKLAL 769
>gi|85702911|ref|ZP_01034015.1| ATP-dependent protease La [Roseovarius sp. 217]
gi|85671839|gb|EAQ26696.1| ATP-dependent protease La [Roseovarius sp. 217]
Length = 803
Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats.
Identities = 339/774 (43%), Positives = 507/774 (65%), Gaps = 7/774 (0%)
Query: 3 EDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEP 62
+D + P+L LR++++FP + +P+ VGREKS++ + V SQ D ++P
Sbjct: 2 QDTLNASYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMSDDKQILLSSQIDPSDDDP 61
Query: 63 DRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPG 122
+ A +Y VGV+A ++++L++PDGT +V+G R + + A F + + + L +I PG
Sbjct: 62 NEAGIYRVGVLANVLQLLKLPDGTVKVLVEGVARVRITDYLANSDFFEAKAEYLSEI-PG 120
Query: 123 KNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAV 182
AL+ T+ D + ++ + P E + ++ ++ P + + ++ +
Sbjct: 121 DAT--TIAALLRTVGDEFARYAKVK-KNIPDEAMAAVTDSEEPAKLADLVAGHLGIEVGR 177
Query: 183 KQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQE 242
KQELLE + +R ++ L+ E+ V++++ I+ + + +M++ Q+EY+L +Q+K IQ+
Sbjct: 178 KQELLETLSVSERLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQK 237
Query: 243 ELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTII 301
ELG G E+ EL + A K S E AE + EL+KL+ + P S + +V Y+ ++
Sbjct: 238 ELGDGEDGAGEIAELEERIAATKLSKEAAEKAQAELKKLKNMSPMSAEATVVRNYLDWML 297
Query: 302 SLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPG 361
S+PWGV S+ +L +AQ VLD DH+GLEKVKERI+E+LAV + +K PI+CL GPPG
Sbjct: 298 SIPWGVKSRTKKDLHKAQDVLDDDHYGLEKVKERIVEYLAVQQRSQKLKGPIMCLVGPPG 357
Query: 362 VGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPV 421
VGKTSLGKS+A + GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP+
Sbjct: 358 VGKTSLGKSVARATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPL 417
Query: 422 FVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSIS 481
+LDEIDK+ D++GDP+SA+LEVLDPEQN+ F D+YL++++DLS+V+F+ TANS ++
Sbjct: 418 ILLDEIDKMGQDFRGDPASAMLEVLDPEQNSTFVDHYLEVEYDLSNVMFLTTANSY-NMP 476
Query: 482 RPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRE 541
PLLDRME+I ++GY +EK EIA +HL+ KQ+ +G +K + + + +I YTRE
Sbjct: 477 GPLLDRMEIIPLAGYTEDEKREIAKQHLLDKQVKNNGLKKGEFTLTDGALTDIIRYYTRE 536
Query: 542 SGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVI 601
+GVR+LE++IA + RK T V ++ FLG +Y + + GVV
Sbjct: 537 AGVRSLEREIAKLARKAVTRIIKGAEKTITVTSENIDDFLGVRKYKFGLAEESDQVGVVT 596
Query: 602 GLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEI 661
GLA+TSVGGE+L IE +L + ++ TG LGDVMKES A Y+R+ + ELGI
Sbjct: 597 GLAYTSVGGELLNIE-ALRLPGKGRMKTTGKLGDVMKESIDAASSYVRSVAPELGIKPPK 655
Query: 662 FNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGG 721
F W +HVHVPEGA PKDGPSAG+ MVTS+VS LT +R IAMTGE+TLRG LP+GG
Sbjct: 656 FEKWDIHVHVPEGATPKDGPSAGLAMVTSIVSVLTGIPIRKDIAMTGEVTLRGNALPIGG 715
Query: 722 IKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
+KEK+LAA R GI +I+ EN KD+ EI D GLK V ++ +VLK AL+
Sbjct: 716 LKEKLLAALRGGIKTVIIPRENEKDLVEIPDNVKAGLKIIPVDHVRDVLKLALV 769
>gi|56421185|ref|YP_148503.1| ATP-dependent Lon protease [Geobacillus kaustophilus HTA426]
gi|56381027|dbj|BAD76935.1| ATP-dependent Lon protease [Geobacillus kaustophilus HTA426]
Length = 775
Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats.
Identities = 334/767 (43%), Positives = 512/767 (66%), Gaps = 6/767 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P+L LR +++FP + + + VGREKS+K + + SQ+D+ ++EPD DLY
Sbjct: 10 VPLLPLRGLLVFPTMVLHLDVGREKSVKALEQAMVEDHMILLTSQKDVAIDEPDMDDLYK 69
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G +A + ++L++P+GT +V+G R + E+ + EP+ +V+ D KD E
Sbjct: 70 MGTIARVKQLLKLPNGTFRVLVEGVARALITEVISEEPYFLVKVEKFAD---RAAKDLED 126
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL T+ + + + L +R ++ S+ P + ++++ + KQ +LE
Sbjct: 127 EALKRTMLEYFEQYINLS-KRLSVDIYASIVDIDEPGRMADIIASHLPLKLEEKQRILET 185
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+K+R +++ +LH E +V++L+ I + ++ M++ QKEY+L++Q+K IQ+ELG
Sbjct: 186 IDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYLREQMKAIQKELGEKEG 245
Query: 250 DI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
EV+EL+ K V +T KEL + E++ S + +V Y+ +I+LPW
Sbjct: 246 KTSEVEELKEKIEAAGMPEHVKQTALKELDRYEKIPATSAESAVIRNYLDWLIALPWSKE 305
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
++D ++KRA+++L+ +H+GL+KVKER++E L+V ++ +K PI+CL GPPGVGKTSL
Sbjct: 306 TEDIHDIKRAEAILNEEHYGLDKVKERVLEFLSVKQLTKSLKGPILCLAGPPGVGKTSLA 365
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
+SIA++LGR++VR+SLGG+ DE+EIRGHRRTY+GAM GRIIQ +++AGT NPVF+LDEID
Sbjct: 366 RSIAKALGRRFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDEID 425
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ SD++GDPS+A+LEVLDPEQN+ F D+Y++ +DLS V+FIATAN L++I +PLLDRM
Sbjct: 426 KMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFIATANHLAAIPQPLLDRM 485
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I + GY EK+ IA RHL+PKQ+ EHG +K ++ + +I YTRE+GVR LE
Sbjct: 486 EVIHIPGYTEVEKLHIAKRHLLPKQITEHGLKKAALQIRDDAMLDIIRHYTREAGVRELE 545
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
+Q+AA+ RK + + + ++L FLG +Y R + GV GLA+T+
Sbjct: 546 RQLAAICRKAARLIVSGEKKRVVITENNLEEFLGKRKYRYGRAEAEDQVGVATGLAYTAF 605
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GG+ L IE SL G KL LTG LGDVMKESA A Y+R+ ++EL I + + +H
Sbjct: 606 GGDTLAIEVSLAPG-NGKLVLTGKLGDVMKESAQAAFSYVRSRAEELDIDPKFHEKYDIH 664
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+HVPEGA+PKDGPSAGIT+ T+L+SALT + V + MTGEITLRG+VL +GG+KEK L+
Sbjct: 665 IHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRVLAIGGLKEKTLS 724
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
A R+G+ +IL ++N KD+ +I + + L+F VS+++EVL AL+
Sbjct: 725 AHRAGLKTVILPKDNEKDLADIPETVKRDLRFVLVSHLDEVLPHALV 771
>gi|106894849|ref|ZP_01361962.1| Peptidase S16, ATP-dependent protease La [Clostridium sp. OhILAs]
gi|106773824|gb|EAT30395.1| Peptidase S16, ATP-dependent protease La [Clostridium sp. OhILAs]
Length = 779
Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats.
Identities = 339/766 (44%), Positives = 514/766 (67%), Gaps = 4/766 (0%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
+P++ LR M +FP + + VGRE S+ + +Q++ ++E+P D YD
Sbjct: 13 LPLIPLRGMTIFPYMVLHFDVGREASINALEEAMVNDQLIFLAAQKEAEIEDPKPDDFYD 72
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
VG V++I ++L++P T +V+G R + + P+ V+ L + K+ E
Sbjct: 73 VGTVSKIKQMLKLPGDTIRVLVEGIARAKIVNLVQESPYYLVDVEEQNYQLEVE-KNKEV 131
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
+AL+ ++ D + +++ + P E++L++ P + ++N+ A KQE+L
Sbjct: 132 DALMRSVLDAFEEYIDVSNKVSP-EILLNISEIDMPGRLADTIASNLLLKPAAKQEILNE 190
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
K R L +L +E++++E++ I + + +++K QKE++L++Q+K IQ+ELG + +
Sbjct: 191 FDPKLRLETLYRILLEEVEILEIEQKINNRVKNQINKMQKEHYLREQLKAIQKELGDDED 250
Query: 250 DIE-VQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVF 308
+E + E + K +K+ ++ E E+E+ +L RL P S + V Y+ I+SLPW
Sbjct: 251 LVEEIDEYKQKLEKIKFPKDIKEKVEREIDRLMRLSPSSAETGVIRSYIDWILSLPWDTE 310
Query: 309 SKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLG 368
+KD +LK++ +LD DH+GLEKVKERI+E+LA+ ++ MK PI+CL GPPGVGKTS+
Sbjct: 311 TKDKLDLKKSAEILDEDHYGLEKVKERILEYLAIRQLSKSMKGPILCLVGPPGVGKTSIA 370
Query: 369 KSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEID 428
KSIA SL RK+VR+SLGG+ DEAEIRGHRRTY+GA+ GRII S++++G+ NPVF+ DEID
Sbjct: 371 KSIARSLNRKFVRMSLGGVRDEAEIRGHRRTYVGAIPGRIISSIRQSGSKNPVFLFDEID 430
Query: 429 KIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRM 488
K+ SD++GDP+SALLEVLDPEQNN+F D+YL+I F+LS ++FI TANSL +I PLLDRM
Sbjct: 431 KLASDFRGDPASALLEVLDPEQNNSFTDHYLEIPFNLSKIMFITTANSLDTIPGPLLDRM 490
Query: 489 ELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLE 548
E+I ++GY EEK I ++L+PKQ+ EHG + +++ S+K I +I+ YTRESGVR LE
Sbjct: 491 EVIRIAGYTEEEKYNITQKYLLPKQIKEHGLKPENLQISEKAIRDVINYYTRESGVRNLE 550
Query: 549 KQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
+QIA + RK+ K + T ++ P++L +LG P Y + + G+V GLAWT V
Sbjct: 551 RQIANICRKVAKRVVEEKLTTVRIAPNNLGKYLGNPVYRYEMANQKDEVGIVRGLAWTQV 610
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GG+ L IE +L +G + KL LTG LGDVMKESA + YIR+ ++EL I + +H
Sbjct: 611 GGDTLSIEVTLMKG-DGKLVLTGRLGDVMKESARAGISYIRSRAEELKIDPDFHKTLDIH 669
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+H+PEGAIPKDGPSAGITM T+++SALT V +AMTGEITLRG+VL +GG+KEK+LA
Sbjct: 670 IHIPEGAIPKDGPSAGITMATAVISALTNTPVYKDVAMTGEITLRGRVLAIGGLKEKVLA 729
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
A R+GI +II+ +N++D++EI D + L+F N+++VL+ AL
Sbjct: 730 ANRAGIKKIIIPMDNKRDLDEIPDNVKRKLEFVIAENMDQVLEHAL 775
>gi|148263974|ref|YP_001230680.1| ATP-dependent protease La [Geobacter uraniumreducens Rf4]
gi|146397474|gb|ABQ26107.1| ATP-dependent protease La [Geobacter uraniumreducens Rf4]
Length = 808
Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats.
Identities = 330/770 (42%), Positives = 516/770 (67%), Gaps = 9/770 (1%)
Query: 11 PILALRNMILFPGVAMPIMVGREKS-LKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYD 69
P+ LR++++FP + +P+ VGREKS L L + Y +Q++ E P D+Y
Sbjct: 19 PLFPLRDIVIFPHMVVPLFVGREKSILALEAAMNGNNKYILLATQKNAKSENPREEDIYR 78
Query: 70 VGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEF 129
+G + +II++L++PDGT +V+G++R ++ + + V+ + + P K+ +
Sbjct: 79 LGTICQIIQLLKLPDGTVKVLVEGKRRGSIVSFLPDAGYFQVEVEEVSESSP---KNAKL 135
Query: 130 EALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEI 189
EAL+ I + ++L P E+ ++ P + +A+++ ++ KQE+L I
Sbjct: 136 EALIRGIYSTFERYVKL-TNSIPGEISNAVTNIAEPSRLADSIAAHLNIKVSDKQEVLSI 194
Query: 190 SKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIN 249
+ R +LL L+ E+++++++ I + +++M+K QK+Y+L +Q++ IQ+ELG N +
Sbjct: 195 TSPAKRLEKLLVLMESEIEILQIENKIHSRVKKQMEKAQKDYYLNEQMRAIQKELG-NKD 253
Query: 250 DI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGV 307
D E++EL K S E + EL+KL+ + P S + +V Y+ ++SLPW
Sbjct: 254 DFKQELRELEEKIEKRISSKEAKDKAFVELKKLKLMSPMSAEAAVIRNYIDWLVSLPWDN 313
Query: 308 FSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSL 367
+ DN ++ A++VL+ DH+GL+KVKERI+E+L+V + + PI+CL GPPGVGKTSL
Sbjct: 314 STADNNDIVTAEAVLNADHYGLDKVKERILEYLSVTSLVNKINGPILCLVGPPGVGKTSL 373
Query: 368 GKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEI 427
+SIA++ GR +V++SLGG+ DEAE+RGHRRTY+GA+ G+IIQ++++AG+SNPVF+LDEI
Sbjct: 374 VRSIAKATGRNFVKMSLGGVRDEAEVRGHRRTYVGALPGKIIQNMKKAGSSNPVFLLDEI 433
Query: 428 DKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDR 487
DK+ +D++GDP+SALLEVLDPEQN+ F+D++LD+D+DLS V+FI TANSL +I +PLLDR
Sbjct: 434 DKMSADFRGDPASALLEVLDPEQNHEFNDHFLDVDYDLSKVMFITTANSLHNIPKPLLDR 493
Query: 488 MELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTL 547
+E+I + GY+ EK+ IA +L+PKQL +G ++ + + I ++I YTRE+GVR L
Sbjct: 494 LEVIKLDGYMEMEKLAIAKEYLVPKQLAANGLEGKNVLIADRAILEVIRRYTREAGVRNL 553
Query: 548 EKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTS 607
E++IA + RKI V V+ + +LG PR+ + GVV GLAWT
Sbjct: 554 EREIAHICRKIAHMIVKGVRKKLAVQLKHVGEYLGVPRFKYGVAEEKDIVGVVTGLAWTE 613
Query: 608 VGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQV 667
VGGE+L IE ++ G+ KLT+TG LG+VM+ESA A+ Y+R+ + LG+ ++ + N +
Sbjct: 614 VGGELLNIEVAVLPGKG-KLTITGKLGEVMQESAQAAMTYVRSRAQILGLDRDFYQNMDI 672
Query: 668 HVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKIL 727
H+HVPEGAIPKDGPSAGITM T++ SALT + VR IAMTGEITL G+VLP+GG+KEKIL
Sbjct: 673 HIHVPEGAIPKDGPSAGITMATAITSALTCKAVRRNIAMTGEITLLGRVLPIGGLKEKIL 732
Query: 728 AAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
AA+R+ I I++ ++N KD+ EI G+ VS+++EV+ ALL++
Sbjct: 733 AARRAQIKIILIPKDNEKDLVEIPKDLTSGIDIRPVSHMDEVIAYALLDK 782
>gi|86159769|ref|YP_466554.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776280|gb|ABC83117.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-C]
Length = 812
Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats.
Identities = 346/784 (44%), Positives = 511/784 (65%), Gaps = 17/784 (2%)
Query: 2 KEDHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
K+ +P+L LR++I+FP + +P+ VGR+KS+ + +Q+ E
Sbjct: 12 KDGKKSRTLPLLPLRDIIVFPHMVVPLFVGRQKSIAALEEAMAHDKAILLCAQKKAKTNE 71
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
P D++ VG V II++L +PDGT +V+G+QR ++ ++ F+ V DI
Sbjct: 72 PAADDIFAVGTVGSIIQLLRLPDGTVKVLVEGKQRARIRRFLDSDKFL---VVEADDIEE 128
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
+ E EAL+ ++ ++L PP E++ S+ +P + A++S +
Sbjct: 129 ESERTVELEALMRSVHSTFEAYVKLNKRIPP-EMLTSVSSIDDPARLADTIVAHLSLKLN 187
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
KQ +LE R +L L+ E+++++++ I+ + +++M+K QKEY+L +Q++ IQ
Sbjct: 188 DKQSILETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEYYLNEQMQAIQ 247
Query: 242 EELGGNIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG E+QEL K K S E +KEL+KL+ + P S + +V Y+ I
Sbjct: 248 KELGERDEFKNEIQELEEKIKNKKMSKEATLKAKKELKKLKMMSPMSAEATVVRNYIDWI 307
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+SLPW +++D + A+ VLD DH+GL+K KERIIE+LAV K+ ++ PI+C GPP
Sbjct: 308 LSLPWYDYTEDKLEIPEAEKVLDEDHYGLKKPKERIIEYLAVQKLVDRIRGPILCFVGPP 367
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSL KSIA S+ R++VRISLGG+ DEAEIRGHRRTYIGA+ G+IIQSL++AG+ NP
Sbjct: 368 GVGKTSLAKSIARSMNRRFVRISLGGVRDEAEIRGHRRTYIGALPGKIIQSLKKAGSGNP 427
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
VF+LDE+DK+ +D++GDPS+ALLEVLDPEQN F+D+YLD+D+DLS V+FI TAN+++ I
Sbjct: 428 VFLLDEVDKMSTDFRGDPSAALLEVLDPEQNFNFNDHYLDLDYDLSKVMFICTANTMAGI 487
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PL DRME+I ++GY EK+ IA R+LIPKQ +G ++F + + L+ YT+
Sbjct: 488 PLPLQDRMEVIRLAGYTDLEKLSIAQRYLIPKQKEVNGLEHVPVEFKRSAMRALVHKYTK 547
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVT-------FLGAPRYTRDRYQG 593
ESGVR+LE++I ++ RKI K+ V+ T +V+ V +LG PRY +
Sbjct: 548 ESGVRSLEREIGSICRKIAKD----VLKTGQVDGKTYVVSERMVQKYLGPPRYRYGTAEE 603
Query: 594 NGDAGVVIGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSD 653
G+ GLAWT +GGE+L +E + G+ KLT+TG LG+VM+ESA A+ Y+R+ ++
Sbjct: 604 QDQVGLTTGLAWTELGGELLTVEAQVMPGKG-KLTITGKLGEVMQESAQAAMSYVRSRAE 662
Query: 654 ELGISQEIFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLR 713
LG+ + N +HVHVPEGAIPKDGPSAGITM T+LVSAL R VR +AMTGEITLR
Sbjct: 663 LLGLDKRFLENVDIHVHVPEGAIPKDGPSAGITMATTLVSALCRIPVRKDVAMTGEITLR 722
Query: 714 GKVLPVGGIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEA 773
G+VLP+GG+KEK+LAA R GI ++++ +EN+KDI EI + L+ V + +EVL+EA
Sbjct: 723 GRVLPIGGLKEKVLAAHRGGIKKVLIPKENQKDIREIPRRVREKLQIVPVDHADEVLREA 782
Query: 774 LLEE 777
L+ E
Sbjct: 783 LVLE 786
>gi|77463405|ref|YP_352909.1| Probable ATP-dependent protease La protein [Rhodobacter sphaeroides
2.4.1]
gi|77387823|gb|ABA79008.1| Probable ATP-dependent protease La protein [Rhodobacter sphaeroides
2.4.1]
Length = 802
Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats.
Identities = 337/773 (43%), Positives = 506/773 (65%), Gaps = 7/773 (0%)
Query: 4 DHMQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPD 63
+ + P+L LR++++FP + +P+ VGREKS++ + V SQ D V++P
Sbjct: 3 EQLPNSYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMADDRQILLSSQIDPSVDDPA 62
Query: 64 RADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGK 123
+Y GV+A ++++L++PDGT +V+G+ R + + + + F + R + L D PG
Sbjct: 63 TDGIYRSGVLANVLQLLKLPDGTVKVLVEGKSRVRITDFLSNDSFFEARAERL-DEEPGD 121
Query: 124 NKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVK 183
+AL+ + + + + + P E + ++ ++ + + ++ +A K
Sbjct: 122 QA--TVDALLRAVAE-EFERYAKIKKNIPEEALAAVSETRDAARLADLVAGHLGIDVAQK 178
Query: 184 QELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEE 243
Q LLE + +R ++ + E+ V++++ I+ + + +M++ Q+EY+L +Q+K IQ+E
Sbjct: 179 QALLETLDVAERLEKVYGHMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQKE 238
Query: 244 LG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIIS 302
LG G E+ EL + A + S E + E E++KL+ + P S + +V Y+ ++
Sbjct: 239 LGDGEDGQNEIAELEERIAKTELSKEARDKAEAEVKKLKSMSPMSAEATVVRNYLDWLLG 298
Query: 303 LPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGV 362
+PWGV S+ +L +AQ VLD DH GLEKVKERI+E+LAV +K PI+CL GPPGV
Sbjct: 299 VPWGVKSRTKKDLTKAQGVLDADHHGLEKVKERIVEYLAVQARSAKLKGPILCLVGPPGV 358
Query: 363 GKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVF 422
GKTSLG+S+A++ GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP+
Sbjct: 359 GKTSLGRSVAKATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPLI 418
Query: 423 VLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISR 482
+LDEIDK+ D++GDP+SA+LEVLDPEQN+ F D+YL++++DLS+V+F+ TANS + S
Sbjct: 419 LLDEIDKMGQDFRGDPASAMLEVLDPEQNSTFVDHYLEVEYDLSNVMFLTTANSYNMPS- 477
Query: 483 PLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRES 542
PLLDRME+I +SGY +EK EIA +HLIPKQ+ HG +K + K + + + + I YTRE+
Sbjct: 478 PLLDRMEIIPLSGYTEDEKREIAKQHLIPKQIENHGLKKGEFKVTDEALTETIRTYTREA 537
Query: 543 GVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
GVR LE++IA + RK E + +V P L FLG R+ + GVV G
Sbjct: 538 GVRNLEREIAKMARKAVTEIVKGHTKSVEVTPEKLEGFLGVKRHRYGLAEKEDQVGVVTG 597
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LAWTSVGGE+L IE +L + ++ TG LGDVMKES A ++R+ S ELG+ F
Sbjct: 598 LAWTSVGGELLSIE-ALRLPGKGRMKTTGKLGDVMKESIDAASSFVRSISPELGVKPPKF 656
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+HVHVPEGA PKDGPSAG+ MVTS+VS LT VR +AMTGE+TLRG VLP+GG+
Sbjct: 657 ETVDIHVHVPEGATPKDGPSAGVAMVTSIVSVLTGVPVRKDVAMTGEVTLRGNVLPIGGL 716
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALL 775
KEK+LAA R GI +++ EEN KD+ EI D +GL+ VS++ EVL+EAL+
Sbjct: 717 KEKLLAALRGGIKTVLIPEENAKDLAEIPDNVKEGLRIIPVSHVREVLREALV 769
>gi|115374881|ref|ZP_01462154.1| ATP-dependent protease La [Stigmatella aurantiaca DW4/3-1]
gi|115368099|gb|EAU67061.1| ATP-dependent protease La [Stigmatella aurantiaca DW4/3-1]
Length = 819
Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats.
Identities = 339/775 (43%), Positives = 515/775 (66%), Gaps = 11/775 (1%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIR-YVEKKGVYFGAV----SQRDMDVEEPDR 64
+P+L LR++I+FP + +P+ VGREKS+ ++ + KG AV +Q+ +P
Sbjct: 18 VPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAHKGPDDKAVILLAAQKKAKTNDPTP 77
Query: 65 ADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKN 124
D++ G V +I++L +PDGT +V+G +R +++ + F + + ++
Sbjct: 78 DDIFHFGTVGHVIQLLPLPDGTVKVLVEGVRRAKVRKFLTNDAFF---MVEVEEVEEHTE 134
Query: 125 KDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQ 184
K E EALV ++ + ++L PP E+++ + +P + A++S + KQ
Sbjct: 135 KTVELEALVRSVHSVFEAFVKLNKRIPP-EMLMQVASIDDPARLADTIVAHLSLKLNDKQ 193
Query: 185 ELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEEL 244
LLE R +L L+ E+++++++ I+ + +++M+K QKEY+L +Q++ IQ+EL
Sbjct: 194 ALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQKEYYLNEQMQAIQKEL 253
Query: 245 GGNIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISL 303
G E+QE+ K + S E +KEL+KL + P S + +V Y+ IISL
Sbjct: 254 GERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMSAEATVVRNYIDWIISL 313
Query: 304 PWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVG 363
PW ++D ++ A+ VL+ DH+GL+K KERI+E+LAV ++ +K P++C GPPGVG
Sbjct: 314 PWYDETQDRLDVTEAEQVLNEDHYGLKKPKERILEYLAVQQLVKKLKGPVLCFVGPPGVG 373
Query: 364 KTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFV 423
KTSL +SIA + GRK+VR+SLGG+ DEAEIRGHRRTYIGAM G++IQSL++AG++NPVF+
Sbjct: 374 KTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPGKLIQSLKKAGSNNPVFL 433
Query: 424 LDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRP 483
LDEIDK+ +D++GDPS+ALLEVLDPEQN+ F+D+YLD+D+DLS V+FI TAN++ +I P
Sbjct: 434 LDEIDKMSTDFRGDPSAALLEVLDPEQNHNFNDHYLDLDYDLSKVMFICTANTMHNIPGP 493
Query: 484 LLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESG 543
L DRME+I ++GY EK+ IA R+LIPK+ +G + S + ++ +I YTRESG
Sbjct: 494 LQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLVDVKVDISNEALKTIIHRYTRESG 553
Query: 544 VRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGL 603
VR+LE++I V RKI ++ N V+ + FLG PRY + G+V GL
Sbjct: 554 VRSLEREIGGVFRKIARDVLKNGKRDLAVDRKMAMKFLGTPRYRYGVAEREDQVGIVTGL 613
Query: 604 AWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFN 663
AWT +GGEIL E ++ G+ KL +TG LG+VM+ESA A+ Y+R+ ++ GI +++F
Sbjct: 614 AWTEMGGEILTTEATIMPGK-GKLIITGKLGEVMQESAQAAMSYVRSRAERFGIDRKVFE 672
Query: 664 NWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIK 723
N+ +HVH+PEGAIPKDGPSAG+T+ T+LVSALTR VR +AMTGEITLRG+VLP+GG+K
Sbjct: 673 NYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVTVRKDVAMTGEITLRGRVLPIGGLK 732
Query: 724 EKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEK 778
EK LAA R+GI +++ +ENRKD+++I L+ V +++VL+EAL+ EK
Sbjct: 733 EKTLAAHRAGIKTVLIPKENRKDLKDIPKKIRMALRIVPVEFVDDVLREALVLEK 787
>gi|51246388|ref|YP_066272.1| ATP-dependent protease La [Desulfotalea psychrophila LSv54]
gi|50877425|emb|CAG37265.1| probable ATP-dependent protease La [Desulfotalea psychrophila
LSv54]
Length = 774
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 327/775 (42%), Positives = 514/775 (66%), Gaps = 8/775 (1%)
Query: 6 MQEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRA 65
M + P++ LR++++FP + P++VGREKS++ + +K V+Q + E+P+
Sbjct: 1 MTKIYPLMPLRDIVIFPHMVAPLVVGREKSIRALEDAMEKKTEIFLVTQLEPTCEDPNEG 60
Query: 66 DLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNK 125
++Y G ++ ++++L +PDGT A+V+G++R + E FM+ V+ ++LPG+++
Sbjct: 61 EIYQCGTLSTVMQLLRLPDGTIKALVEGQRRARIVSRVPHEEFMQVEVEECTEVLPGQDE 120
Query: 126 DHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
+E + + + + ++ E+++S ++P+ N +++ S KQE
Sbjct: 121 LIAYERELRK----AFQQFAHLGKKIGEEVVVSCSSIEDPVKLANVICSHLPLSSKEKQE 176
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
+LE+ + R LL +L +ELQ+ E++ I +K ++++ + Q++Y+L ++I+ +Q+E+G
Sbjct: 177 VLEVETLGGRIELLLEILFRELQLAEVERKINIKVKQKLSRAQRDYYLGEKIREMQKEIG 236
Query: 246 GNINDI-EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
+ + E+ EL K + +KEL+KL + S + +V Y+ TI+ LP
Sbjct: 237 QGEDGVDEMTELENIIKAKKMPAYARARVQKELKKLRGMPAMSAETTVVRSYIDTILGLP 296
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGK 364
W SK N+ +A+ +L++DH+GLEK KERI+E LAV +K PI+C GPPGVGK
Sbjct: 297 WKKRSKGQLNVLKAEGILNKDHYGLEKPKERILEFLAVQSQVAKLKGPILCFVGPPGVGK 356
Query: 365 TSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVL 424
TS+ +SIA+S+GR++ R+SLGGL DEAEIRGHRRTY+GAM G++++++Q+ G +NPVF L
Sbjct: 357 TSICQSIAKSMGREFARLSLGGLRDEAEIRGHRRTYVGAMAGKVLRAMQKVGVANPVFCL 416
Query: 425 DEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPL 484
DEIDK+ +D++GDP++ALLEVLDPEQN++F+D+YLD+D+DLS V FI TANSL I PL
Sbjct: 417 DEIDKMSTDFRGDPAAALLEVLDPEQNSSFNDHYLDLDYDLSQVFFITTANSLEGIPIPL 476
Query: 485 LDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGV 544
DRME+I +SGY E+K IA ++L+PKQL +GF+K+DI S + ++ YTRE+GV
Sbjct: 477 QDRMEIIQLSGYTEEDKQVIAEKYLLPKQLKANGFQKDDIFLSPGAMLTVVRHYTREAGV 536
Query: 545 RTLEKQIAAVIRKITKEAATNVVHTTK--VEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
R LE+ +A++ RK+ ++ + K + + T+LG P+Y + + G+ G
Sbjct: 537 RGLERVLASLCRKVARDRLQKGKKSKKYRIGEKSVPTYLGTPKYRYGLAEERDEVGLATG 596
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LAWT VGG +L IE L G+ KLTLTG LGDVM+ESA A YIR+ + EL + + +
Sbjct: 597 LAWTQVGGVLLQIEVILMPGK-GKLTLTGQLGDVMQESAQAAYSYIRSRAKELKLEPDFY 655
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+HVHVPEGAIPKDGPSAGIT+ T+L SALT R +R +AMTGEITLRG+VLP+GG+
Sbjct: 656 EKVDIHVHVPEGAIPKDGPSAGITIATTLASALTGRPIRHELAMTGEITLRGRVLPIGGL 715
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
EK+LAAKR IT+++L EEN +D++++ L VS++++VL++ALL +
Sbjct: 716 TEKLLAAKRGNITKVLLPEENGRDLKDVPAKIKNALDIKLVSHMDQVLEQALLSK 770
>gi|149917074|ref|ZP_01905574.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
gi|149821990|gb|EDM81383.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
Length = 826
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 343/813 (42%), Positives = 526/813 (64%), Gaps = 15/813 (1%)
Query: 9 EMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLY 68
++P+L LR +I+FP +P+ VGREKS+ + +Q+ V +P ++
Sbjct: 5 KIPLLPLRELIVFPHEVVPLFVGREKSINALEEAMASDRQILLCAQKKAKVNDPKPDGIH 64
Query: 69 DVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEP---FMKGRVKLLPDILPGKNK 125
+ G + I+++L +PDGT +V+G+ R +QE E +++ + P+I P +
Sbjct: 65 NFGTIGTIVQLLRLPDGTVKVLVEGKSRARIQEYLDAEDKYFWVEAEIVETPEIDP--EQ 122
Query: 126 DHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
+ EF+AL+ ++Q ++L PP EL +S++ NP + +A+++ +A KQ+
Sbjct: 123 EPEFQALMRSVQATFENYVKLNKRVPP-ELAVSVQSIDNPSRLADTIAAHVNFKLAAKQD 181
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
LLE + R L L+ E+++++++ I+ + +++M+K QKEY+L +Q++ IQ+ELG
Sbjct: 182 LLETENVWTRLETLYELMQNEIEILQVEKKIRTRVKKQMEKNQKEYYLNEQMQAIQKELG 241
Query: 246 GNIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLP 304
E+QEL K K + E E +KELRKL+ + P S + +V Y+ T++SLP
Sbjct: 242 SQDEFKNELQELEDKIRRKKMTKEATERLKKELRKLKMMSPMSAEATVVRNYIDTVLSLP 301
Query: 305 WGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGK 364
W + D + A+ +LD DH+GLEK KERI+E+LAV + +K PI+CL GPPGVGK
Sbjct: 302 WADKTGDKLEISDAEVILDEDHYGLEKPKERIVEYLAVQALVKKVKGPILCLVGPPGVGK 361
Query: 365 TSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVL 424
TSL KS+A + GRK+VR+SLGG+ DEAEIRGHRRTYIGAM G+IIQ L+++G+SNPVF+L
Sbjct: 362 TSLAKSVARATGRKFVRVSLGGVRDEAEIRGHRRTYIGAMPGKIIQGLRKSGSSNPVFLL 421
Query: 425 DEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPL 484
DEIDK+ D++GDPS+A+LEVLDPEQN AF D++LD+D+DLS VLF+ TANSL +I PL
Sbjct: 422 DEIDKMSMDFRGDPSAAMLEVLDPEQNQAFVDHFLDLDYDLSDVLFLCTANSLHTIPLPL 481
Query: 485 LDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGV 544
DRME+I ++GY E+K++IA ++L+PKQ +G + ++ FS +++LI+ YT+E+GV
Sbjct: 482 QDRMEIIQLTGYTDEDKLKIARQYLLPKQRELNGLDEVEVNFSDGAVKELINYYTKEAGV 541
Query: 545 RTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVT--FLGAPRYTRDRYQGNGDAGVVIG 602
R+LE++IAAV+RK+ ++ + + +T +LG ++ R + G+ G
Sbjct: 542 RSLEREIAAVLRKVARDYVKDNKKKKTFKVDAKITQKYLGPRKFRYQRGEDEDQIGMTNG 601
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LA T GG++L E ++ G+ K+TLTG LG+VM+ESA L Y+R+ G+ + +
Sbjct: 602 LAVTIFGGDLLPAEVTITPGKG-KVTLTGKLGEVMQESARAGLTYVRSRCLTFGLDPDFY 660
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+ H+H PEGA+PKDGPSAG+TMVTS+VSAL VR +AMTGEI LRGKVLP+GG+
Sbjct: 661 EHVDFHIHFPEGAVPKDGPSAGVTMVTSVVSALLGAPVRKEVAMTGEINLRGKVLPIGGL 720
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL--LEEKVI 780
KEKILAA RS + ++ ++N KD+ ++ LK L + S I+EVL+ A+ L+E+
Sbjct: 721 KEKILAAYRSDMKIVVCPQDNEKDLHDVPKNVLKALDIRFASTIDEVLRWAIAPLDEEHP 780
Query: 781 DTTDIYSFGKKTEEEKTEKVEKT---EKKQRKK 810
+ T + E T+ VE E++ RKK
Sbjct: 781 NKTFRRFLAGEAPAEATDWVEAREYLEERDRKK 813
>gi|110680150|ref|YP_683157.1| ATP-dependent protease La, putative [Roseobacter denitrificans OCh
114]
gi|109456266|gb|ABG32471.1| ATP-dependent protease La, putative [Roseobacter denitrificans OCh
114]
Length = 803
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 339/777 (43%), Positives = 510/777 (65%), Gaps = 11/777 (1%)
Query: 6 MQEEM----PILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEE 61
MQE + P+L LR++++FP + +P+ VGR+KS++ + V SQ D ++
Sbjct: 1 MQEPLNASYPVLPLRDIVVFPHMIVPLFVGRDKSVRALEEVMSDDKQILLSSQIDPGEDD 60
Query: 62 PDRADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILP 121
PD ++ GV+A ++++L++PDGT +V+G+ R + E + F + R + L + +P
Sbjct: 61 PDSDGIFKAGVLANVLQLLKLPDGTVKVLVEGQARVRISEYIENDSFFEARAEYLTE-MP 119
Query: 122 GKNKDHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIA 181
G E AL+ T+ D + + + P E + ++ + P + + ++ +A
Sbjct: 120 GDLATTE--ALLRTVTD-EFERYAKVKKNVPEEALAAVGESTEPAKLADLVAGHLGIEVA 176
Query: 182 VKQELLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQ 241
KQ+LLE + +R ++ L+ E+ V++++ I+ + + +M++ Q+EY+L +Q+K IQ
Sbjct: 177 QKQDLLETLSVSERLEKVYGLMQGEMSVLQVEKKIKTRVKSQMERTQREYYLNEQMKAIQ 236
Query: 242 EELG-GNINDIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTI 300
+ELG G EV EL K A K S E E E E++KL+ + P S + +V Y+ +
Sbjct: 237 QELGDGEDGKNEVAELEAKIADTKLSKEAREKAEAEIKKLKNMSPMSAEATVVRNYLDWM 296
Query: 301 ISLPWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPP 360
+S+PWG S+ +L RAQ +LD DHFGLEKVKERI+E+LAV + +K PI+CL GPP
Sbjct: 297 LSIPWGTKSRVKKDLSRAQKILDDDHFGLEKVKERIVEYLAVQQRSTKIKGPIMCLVGPP 356
Query: 361 GVGKTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNP 420
GVGKTSLGKS+A + GR+++RISLGG+ DE+EIRGHRRTYIG+M G+IIQ+L++A T+NP
Sbjct: 357 GVGKTSLGKSVARATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNP 416
Query: 421 VFVLDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSI 480
+ +LDEIDK+ D++GDP+SA+LEVLDPEQN F D+YL++++DLS+V+F+ T+NS ++
Sbjct: 417 LILLDEIDKMGQDFRGDPASAMLEVLDPEQNATFVDHYLEVEYDLSNVMFLTTSNSY-NM 475
Query: 481 SRPLLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTR 540
PLLDRME+I ++GY +EK EIA +HLIPKQ+ HG + + + + ++I YTR
Sbjct: 476 PGPLLDRMEIIPLAGYTEDEKREIAKQHLIPKQIKNHGLKAKEFELQDSALSEMIRTYTR 535
Query: 541 ESGVRTLEKQIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVV 600
E+GVR LE++IA V RK + T V +L FLG +Y + GVV
Sbjct: 536 EAGVRNLEREIAKVARKSLTKIIKKEAETVSVTDENLDEFLGVKKYRYGLAEKEDQIGVV 595
Query: 601 IGLAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQE 660
GLA+TSVGGE+L IE +L + ++ TG LGDVMKES A Y+R+ S ++G+
Sbjct: 596 TGLAYTSVGGELLSIE-ALRLPGKGRMKTTGKLGDVMKESIDAASSYVRSVSPQIGVKPP 654
Query: 661 IFNNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVG 720
F+ +HVHVP+GA PKDGPSAG+ MVTS+VS LT+ VR IAMTGE++LRG +P+G
Sbjct: 655 QFDRIDIHVHVPDGATPKDGPSAGLAMVTSIVSVLTQIPVRKDIAMTGEVSLRGNAMPIG 714
Query: 721 GIKEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
G+KEK+LAA R GIT +++ EEN KD+ EI D +GL VS+++EVL+ AL+ +
Sbjct: 715 GLKEKLLAALRGGITTVLIPEENAKDLPEIPDNVKEGLNIIPVSHVSEVLEHALISK 771
>gi|119473283|ref|ZP_01614935.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Alteromonadales bacterium TW-7]
gi|119444506|gb|EAW25826.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Alteromonadales bacterium TW-7]
Length = 786
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 344/794 (43%), Positives = 522/794 (65%), Gaps = 19/794 (2%)
Query: 7 QEEMPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRAD 66
Q E+P+LALR+++++P + +P+ VGREKS+K + K V+Q+D V+EP++ D
Sbjct: 8 QVEIPVLALRDVVVYPHMVIPLFVGREKSIKCLEAAMDKDKQIFLVAQKDATVDEPEQDD 67
Query: 67 LYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLL-PDILPGKNK 125
+Y +G +A ++++L++PDGT +V+G QR +++ + F + + D++ + +
Sbjct: 68 IYRIGTIATVLQLLKLPDGTVKVLVEGTQRAEIKDFVDNDEFFVADAQFIESDLIDEQEQ 127
Query: 126 DHEFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQE 185
D + +S + ++L + PP E++ S+ P + +A++ + KQ+
Sbjct: 128 DVFIRSAISQFEGY----VKLNKKIPP-EVLTSVSGIDEPARLADTMAAHMPLKVPEKQK 182
Query: 186 LLEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG 245
+LEIS + +R L+ L+ E+ +++++ I+ + +++M+K Q+EY+L +Q+K IQ+ELG
Sbjct: 183 VLEISSVTERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELG 242
Query: 246 GNINDI--EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISL 303
++D+ E + L+ + SSE E EL KL+ + P S + +V Y+ T+I++
Sbjct: 243 -ELDDVPDEFEALKKRIEESGMSSEAQEKATTELNKLKMMSPMSAEATVVRSYIDTLINV 301
Query: 304 PWGVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVG 363
PW SK +L AQ +LD +H GL+KVKERI+E+LAV + +K PI+CL GPPGVG
Sbjct: 302 PWKKRSKVKKDLAGAQKILDSEHHGLDKVKERILEYLAVQQRTNKLKGPILCLVGPPGVG 361
Query: 364 KTSLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFV 423
KTSLG+SIA S GRKY+R++LGG+ DEAEIRGHRRTYIG+M G++IQ++ + G NP+F+
Sbjct: 362 KTSLGQSIARSTGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQNMTKVGVKNPLFL 421
Query: 424 LDEIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRP 483
LDEIDK+ SD +GDP+SALLEVLDPEQN+ F D+YL++DFDLS V+F+AT+NS +I P
Sbjct: 422 LDEIDKMSSDMRGDPASALLEVLDPEQNSHFADHYLEVDFDLSDVMFVATSNSF-NIPGP 480
Query: 484 LLDRMELIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESG 543
LLDRME+I +SGY +EK+ IA HLI KQ+ +G + N+I+ I +I YTRE+G
Sbjct: 481 LLDRMEVIRLSGYTEDEKLNIAKEHLITKQVKRNGLKDNEIEIDDSAIIGIIRYYTREAG 540
Query: 544 VRTLEKQIAAVIRKITKEAATNV-VHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIG 602
VR LE++I+ + RK K T + ++L +LG R+ + + G V G
Sbjct: 541 VRNLEREISKLCRKAVKNILIEKDTKTVTINQNNLEEYLGVQRFDYGKAEDGDRIGQVTG 600
Query: 603 LAWTSVGGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIF 662
LAWT VGG++L IE + G+ KLT TG+LGDVM+ES A+ +R +D I+ + +
Sbjct: 601 LAWTEVGGDLLTIECAAVPGKG-KLTYTGSLGDVMQESIQAAMTVVRNRADTFRINSDFY 659
Query: 663 NNWQVHVHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGI 722
+HVHVPEGA PKDGPSAG MVT LVS+LT V+A +AMTGEITLRG+VLP+GG+
Sbjct: 660 EKRDIHVHVPEGATPKDGPSAGAAMVTGLVSSLTGNPVKADVAMTGEITLRGEVLPIGGL 719
Query: 723 KEKILAAKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDT 782
KEK+LAA R GI +I+ + N +D++EI D L GL H V+ I+EVLK AL+
Sbjct: 720 KEKLLAAHRGGIKTVIIPKINERDLKEIPDNVLAGLDIHPVTWIDEVLKLALVHP----- 774
Query: 783 TDIYSFGKKTEEEK 796
+ SF +TE+++
Sbjct: 775 --VESFSVETEKKQ 786
>gi|153898937|ref|ZP_02019502.1| ATP-dependent protease La [Methylobacterium extorquens PA1]
gi|156450054|ref|ZP_02056435.1| ATP-dependent protease La [Methylobacterium chloromethanicum CM4]
gi|151590112|gb|EDN53521.1| ATP-dependent protease La [Methylobacterium extorquens PA1]
gi|156191157|gb|EDO23345.1| ATP-dependent protease La [Methylobacterium chloromethanicum CM4]
Length = 806
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 333/766 (43%), Positives = 503/766 (65%), Gaps = 6/766 (0%)
Query: 12 ILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYDVG 71
+L LR++++FP + +P+ VGREKS++ + + + +Q + ++P +Y +G
Sbjct: 20 VLPLRDIVVFPHMIVPLFVGREKSIRALEEAVRSDRHILLATQINASDDDPATDAIYTIG 79
Query: 72 VVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEFEA 131
+A ++++L++PDGT +V+G R ++ ++ + + + L D L + E EA
Sbjct: 80 TLASVLQLLKLPDGTVKVLVEGAGRAQIESFVRSDEYYEAQALTLTDDLGDRV---EAEA 136
Query: 132 LVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEISK 191
L ++ ++L + P E++ ++ + P + ++++ IA KQ +LEI
Sbjct: 137 LARSVISEFENYVKLNKKISP-EVVSAVTQIDEPSKLADTVGSHLAVKIADKQAILEIPT 195
Query: 192 MKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNINDI 251
+ R R+L L+ E+ V++++ I+ + + +M+K Q+EY+L +Q+K IQ+ELG
Sbjct: 196 VAQRLERVLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGDEDGRD 255
Query: 252 EVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFSKD 311
E+ EL K K + E E EL+KL ++ P S + +V Y+ ++ +PWG SK
Sbjct: 256 ELAELEDKIEKTKLTKEAREKATAELKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSKI 315
Query: 312 NFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGKSI 371
+L AQ VLD DHFGL+KVK+RI+E+LAV + + PI+CL GPPGVGKTSLGKSI
Sbjct: 316 KKDLLGAQQVLDSDHFGLDKVKDRIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSI 375
Query: 372 AESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDKID 431
A++ GR++VR+SLGG+ DEAEIRGHRRTYIG+M G+I+QS+++A TSNP+ +LDEIDK+
Sbjct: 376 AKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMG 435
Query: 432 SDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRMELI 491
D++GDPS+ALLEVLDPEQN F+D+YL++D+DLS+V+F+ TAN+L +I PL+DRME+I
Sbjct: 436 MDFRGDPSAALLEVLDPEQNATFNDHYLEVDYDLSNVMFVTTANTL-NIPGPLMDRMEVI 494
Query: 492 DVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEKQI 551
++GY EEK++IA RHLIP+ + +HG ++ + + LI YTRE+GVR LE++I
Sbjct: 495 RIAGYTEEEKLQIARRHLIPEAVKKHGLTPDEWSITDDGLMMLIRRYTREAGVRNLEREI 554
Query: 552 AAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSVGGE 611
+ +IRK KE V + P L FLG P++ + GVV GLAWT VGGE
Sbjct: 555 SNLIRKAVKEILITKVKQVEANPETLPEFLGPPKFRYGEIDADDQVGVVTGLAWTEVGGE 614
Query: 612 ILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVHVHV 671
+L IE + G+ K+T+TGNL DVMKES A Y+R+ + + GI +F +HVHV
Sbjct: 615 LLTIEGVMMPGKG-KMTVTGNLRDVMKESISAAASYVRSRAIDFGIEPPLFERRDIHVHV 673
Query: 672 PEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILAAKR 731
PEGA PKDGPSAGI M T+++S LT VR +AMTGE+TLRG+VLP+GG+KEK+LAA R
Sbjct: 674 PEGATPKDGPSAGIAMATAIISTLTGIPVRRDVAMTGEVTLRGRVLPIGGLKEKLLAALR 733
Query: 732 SGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEE 777
GI +++ EEN KDI E+ D GL+ VS +++VL+ AL+ +
Sbjct: 734 GGIKTVMIPEENAKDIAEVPDSVKNGLEIIPVSRMDQVLQHALVRQ 779
>gi|78485523|ref|YP_391448.1| ATP-dependent protease La [Thiomicrospira crunogena XCL-2]
gi|78363809|gb|ABB41774.1| ATP-dependent protease La [Thiomicrospira crunogena XCL-2]
Length = 815
Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats.
Identities = 344/802 (42%), Positives = 516/802 (64%), Gaps = 9/802 (1%)
Query: 12 ILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYDVG 71
+LALR++++FPG+ +P+ VGR KS+ + K+ V+Q++ E P +LY G
Sbjct: 14 VLALRDVVVFPGMVVPLFVGRPKSMNALNAAMKEDKQIFLVTQKNATEETPTIDNLYQTG 73
Query: 72 VVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEFEA 131
V+A I+++L++PDGT +V+G +RF L + E F+ G ++ + + D++
Sbjct: 74 VMANILQLLKLPDGTLKVLVEGVKRFELLALNDEENFLTGDIQ---QVESDEQLDNDGVV 130
Query: 132 LVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEISK 191
LV TIQ+ + + ++ P E++ S+++ +P ++ SAN+ I KQ LLEI
Sbjct: 131 LVRTIQE-RFQDYAALKKKIPSEVLKSVQKITDPNRLVDTISANLKLGIEEKQTLLEILT 189
Query: 192 MKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGGNIND- 250
+ DR +L + E+ ++E + I + +++MD+ Q+ ++L +++ I EELG + D
Sbjct: 190 INDRLEHILKTIETEIDLLESEQRINSRVKKKMDQTQRNFYLNTKLQAIHEELGDSSEDG 249
Query: 251 -IEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFS 309
E L+ + + + + E EL+KL+ + PQSP+ ++ Y++ ++S+PW S
Sbjct: 250 VSEFTRLKEQIEQAGMTKDALKVAEDELKKLKMMSPQSPEANIIRTYIEWLVSIPWKKRS 309
Query: 310 KDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGK 369
+ + +L +AQ++LD+ H+GLEKVKERIIE+LAV K MK PI+CL GPPGVGKTSL +
Sbjct: 310 RVSKDLNKAQTILDKQHYGLEKVKERIIEYLAVQKRVNKMKGPILCLVGPPGVGKTSLAR 369
Query: 370 SIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDK 429
SIAE+ RKYVR+SLGG+ DEAEIRGHR+TY+GA+ GR+IQ ++ AGT NP+F+LDEIDK
Sbjct: 370 SIAEATNRKYVRMSLGGVRDEAEIRGHRKTYLGALPGRVIQKMKTAGTRNPLFLLDEIDK 429
Query: 430 IDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRME 489
+ D +GDP+SALLEVLDPEQN AF+D+YL++D+DLS V+F+AT+NS+ I LLDRME
Sbjct: 430 MARDLRGDPASALLEVLDPEQNKAFNDHYLEVDYDLSDVMFVATSNSMD-IPEALLDRME 488
Query: 490 LIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEK 549
+ID++GY EK+ IA +HL+P+++ EHG ++ +++ TI K+I YTRE+GVR L++
Sbjct: 489 IIDLAGYTENEKLNIATQHLLPREIKEHGLKQGELEVPSDTILKIIQTYTREAGVRLLDQ 548
Query: 550 QIAAVIRKITKEAATNVVHT-TKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSV 608
+A + RK KE TN V P L +LG +Y G V GLAWT V
Sbjct: 549 SLAKICRKSLKEIVTNEAKAPITVTPDTLDKYLGVAKYRFGLADETNQIGQVAGLAWTRV 608
Query: 609 GGEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVH 668
GG++L IE + G+ K T TG LG VM+ES A+ IR+ S ELG+ + + VH
Sbjct: 609 GGDLLRIEATAMPGKG-KNTSTGQLGSVMQESTQAAMSVIRSRSKELGLPDDFYEKQDVH 667
Query: 669 VHVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILA 728
+H PEGAI KDGPSAGI + T++ S LT+ VR+ +AMTGEITLRG+VLP+GG+KEK+LA
Sbjct: 668 LHFPEGAIKKDGPSAGIAICTAIASVLTQIPVRSDVAMTGEITLRGEVLPIGGLKEKLLA 727
Query: 729 AKRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEALLEEKVIDTTDIYSF 788
A R GI +++ EN +D+ EI+D +GL H V I+EV K AL ++ +I +
Sbjct: 728 AARGGIKTVLIPYENVRDLAEISDEVKEGLDIHPVQWIDEVFKIALESFPNVENDEISAI 787
Query: 789 GKKTEEEKTEKVEKTEKKQRKK 810
K E K K+ +K
Sbjct: 788 SMKDAEMGKLVANKQSTKEIQK 809
>gi|144899462|emb|CAM76326.1| Peptidase S16, ATP-dependent protease La [Magnetospirillum
gryphiswaldense MSR-1]
Length = 800
Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats.
Identities = 338/765 (44%), Positives = 505/765 (66%), Gaps = 7/765 (0%)
Query: 11 PILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMDVEEPDRADLYDV 70
P+L LR++++FP + +P+ VGR+KS++ + V ++ V+Q++ ++P AD+YDV
Sbjct: 11 PVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMREDKQILLVAQKNAAQDDPTTADIYDV 70
Query: 71 GVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDHEFE 130
G V+ ++++L++PDGT +V+G +R + T E F + +++ D G + E E
Sbjct: 71 GTVSTVLQLLKLPDGTVKVLVEGGRRARITGFTDNESFFQATAEMIDD---GVLEGQELE 127
Query: 131 ALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQELLEIS 190
AL ++ + ++L + PP E+++S+ + ++P + ++++S I+ KQELLE+
Sbjct: 128 ALSRSVVGQFEQYIKLNKKIPP-EVLVSVNQIEDPAKLADTVASHLSLKISEKQELLELG 186
Query: 191 KMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELG-GNIN 249
+R R+ + E+ V++++ I+ + + +M+K Q+EY+L +Q+K IQ+ELG G+
Sbjct: 187 TTAERLERVYSYMEGEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKELGEGDDG 246
Query: 250 DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPWGVFS 309
E EL + A + S E E EL+KL+ + P S + +V Y+ I+++PW +
Sbjct: 247 KDESAELEERIAKTRLSKEAREKALAELKKLKSMSPMSAEATVVRNYLDWILTIPWKKRT 306
Query: 310 KDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKTSLGK 369
K ++K A+ +L+ +H+GLEKVKERI+E+LAV +K PI+CL GPPGVGKTSLGK
Sbjct: 307 KVKKDVKLAEKILNSEHYGLEKVKERIVEYLAVQTRTEKVKGPILCLVGPPGVGKTSLGK 366
Query: 370 SIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLDEIDK 429
S+A++ GR +VRISLGG+ DEAE+RGHRRTYIG+M G+IIQ +++A +SNP+F+LDEIDK
Sbjct: 367 SMAQATGRNFVRISLGGVRDEAEVRGHRRTYIGSMPGKIIQGMKKAKSSNPLFLLDEIDK 426
Query: 430 IDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLLDRME 489
+ +D++GDPSSALLEVLDPEQN F+D+YL++D+DLS V+F+ TAN+L + +PLLDRME
Sbjct: 427 LGADWRGDPSSALLEVLDPEQNATFNDHYLEVDYDLSDVMFVTTANTL-RMPQPLLDRME 485
Query: 490 LIDVSGYIIEEKVEIAARHLIPKQLVEHGFRKNDIKFSKKTIEKLIDDYTRESGVRTLEK 549
LI +SGY +EKVEIA RHL K G +K + S I L YTRE+GVR+LE+
Sbjct: 486 LIRLSGYTEDEKVEIAKRHLFDKVATAAGLKKGEWTVSDDAIRDLCRYYTREAGVRSLER 545
Query: 550 QIAAVIRKITKEAATNVVHTTKVEPSDLVTFLGAPRYTRDRYQGNGDAGVVIGLAWTSVG 609
++A + RK T E + V P +L + G +Y + G V GLAWT VG
Sbjct: 546 ELANLARKATTEIVSKGKLKVAVTPRNLEKYAGVRKYRFGEAELEDMVGAVTGLAWTEVG 605
Query: 610 GEILFIETSLHRGREPKLTLTGNLGDVMKESAVIALDYIRAHSDELGISQEIFNNWQVHV 669
GE+L IE G+ + TG LGDVM+ES A Y+R+ S LGI +F +HV
Sbjct: 606 GELLTIEAVTMPGKG-SFSHTGKLGDVMQESVQAARSYVRSRSVSLGIKPTVFEKKDIHV 664
Query: 670 HVPEGAIPKDGPSAGITMVTSLVSALTRRKVRAGIAMTGEITLRGKVLPVGGIKEKILAA 729
HVPEGA PKDGPSAGI M T++VSA+T VR +AMTGEITLRG+VLP+GG+KEK+LAA
Sbjct: 665 HVPEGATPKDGPSAGIAMCTAIVSAITGITVRREVAMTGEITLRGRVLPIGGLKEKLLAA 724
Query: 730 KRSGITEIILCEENRKDIEEINDIYLKGLKFHYVSNINEVLKEAL 774
R G+ +++ ++N KD+ EI D KGL+ V ++EVL AL
Sbjct: 725 LRGGLKTVLIPKDNEKDLAEIPDNVKKGLEIVPVGTVDEVLARAL 769
>gi|85859382|ref|YP_461584.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
gi|85722473|gb|ABC77416.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
Length = 812
Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats.
Identities = 332/792 (41%), Positives = 536/792 (67%), Gaps = 26/792 (3%)
Query: 10 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEK--KGVYFGAVSQRDMDVEEPDRADL 67
+P+L LR++++FP +P+ VGREKS+ + K KG++ V+Q++ ++P D+
Sbjct: 17 LPLLPLRDVVVFPHSIVPLFVGREKSIAALESAMKDEKGIFM--VAQKNAKKDDPAEEDI 74
Query: 68 YDVGVVAEIIRVLEMPDGTTTAIVQGRQRFALQEITATEPFMKGRVKLLPDILPGKNKDH 127
+ +G + II++L +PDGT +V+G++R A++E E + RV+ + D +N++
Sbjct: 75 FRIGTIGIIIQLLRLPDGTVKVLVEGKKRAAIKEYVPNEEYFFVRVEEIED---AENRNV 131
Query: 128 -EFEALVSTIQDMSLKMMELMVERPPRELILSMRRNKNPMYQINFASANISTSIAVKQEL 186
+ EAL+ ++ + + + + ++ E++ ++ +P + S++I+ + KQ++
Sbjct: 132 VKTEALIRSL-NAAFENYVKLSKKVHVEMVGTIAAIDDPSKLADVISSHINLKLEDKQKI 190
Query: 187 LEISKMKDRGYRLLYLLHKELQVMELKASIQMKTREEMDKQQKEYFLQQQIKTIQEELGG 246
LEI + +R + L+ E++++E++ I+ + +++M+K QK+Y+L +Q++ IQ+E+G
Sbjct: 191 LEIVDVNERLEAIYTLILSEIEILEVEEKIKRRVKKQMEKTQKDYYLNEQMRAIQKEMGE 250
Query: 247 NIN-DIEVQELRTKAATMKWSSEVAETFEKELRKLERLHPQSPDYSVQMQYVQTIISLPW 305
E+ +L + K S E + ++E++KL+ + P S + +V Y+ I+ +PW
Sbjct: 251 KDEFKNEIADLEKRLKQKKMSEEATKKVKQEIKKLQMMAPMSAEATVVRNYIDWILDMPW 310
Query: 306 GVFSKDNFNLKRAQSVLDRDHFGLEKVKERIIEHLAVLKMKGDMKSPIICLYGPPGVGKT 365
+++ + LK+++++L+ DH+GLEKVKERI+E+LAV + K I+CL GPPGVGKT
Sbjct: 311 SEKTENVYTLKQSEAILEEDHYGLEKVKERILEYLAVQMLVKKNKGSILCLVGPPGVGKT 370
Query: 366 SLGKSIAESLGRKYVRISLGGLHDEAEIRGHRRTYIGAMCGRIIQSLQRAGTSNPVFVLD 425
S+ KS+A + RK+VR+SLGG+ DEAEIRGHRRTYIGA+ G+I+Q L++AG++NPVF LD
Sbjct: 371 SIAKSVARATNRKFVRLSLGGVRDEAEIRGHRRTYIGALPGKIVQLLKKAGSNNPVFCLD 430
Query: 426 EIDKIDSDYKGDPSSALLEVLDPEQNNAFHDNYLDIDFDLSHVLFIATANSLSSISRPLL 485
E+