BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu0168
(217 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24378700|ref|NP_720655.1| putative metal-dependent trans... 395 e-108
gi|6694218|gb|AAF25184.1|AF182402_1 metalloregulator ScaR [... 251 2e-65
gi|94989879|ref|YP_597979.1| Iron-dependent repressor [Stre... 250 4e-65
gi|15903523|ref|NP_359073.1| Metalloregulator [Streptococcu... 248 2e-64
gi|77406811|ref|ZP_00783844.1| iron-dependent transcription... 247 3e-64
gi|21909853|ref|NP_664121.1| putative metal-dependent trans... 247 3e-64
gi|71903022|ref|YP_279825.1| iron-dependent repressor [Stre... 247 4e-64
gi|94993765|ref|YP_601863.1| Iron-dependent repressor [Stre... 247 4e-64
gi|50913737|ref|YP_059709.1| Iron-dependent repressor [Stre... 247 4e-64
gi|19745579|ref|NP_606715.1| putative metal-dependent trans... 247 4e-64
gi|71910180|ref|YP_281730.1| iron-dependent repressor [Stre... 246 5e-64
gi|22537677|ref|NP_688528.1| iron-dependent transcriptional... 246 6e-64
gi|148997687|ref|ZP_01825251.1| iron-dependent transcriptio... 246 7e-64
gi|15901474|ref|NP_346078.1| iron-dependent transcriptional... 246 1e-63
gi|77411388|ref|ZP_00787735.1| iron-dependent transcription... 245 1e-63
gi|125717132|ref|YP_001034265.1| Metalloregulator ScaR (Fe/... 244 3e-63
gi|15674572|ref|NP_268746.1| putative metal-dependent trans... 243 7e-63
gi|146319741|ref|YP_001199453.1| putative metal-dependent t... 242 1e-62
gi|111657545|ref|ZP_01408286.1| hypothetical protein SpneT_... 218 3e-55
gi|29375587|ref|NP_814741.1| iron-dependent repressor [Ente... 175 1e-42
gi|69244702|ref|ZP_00602966.1| Iron dependent repressor:Feo... 164 4e-39
gi|16118833|gb|AAL14619.1|AF417113_4 putative iron dependen... 160 4e-38
gi|116334289|ref|YP_795816.1| Mn-dependent transcriptional ... 157 3e-37
gi|28377808|ref|NP_784700.1| metal-dependent regulator [Lac... 157 3e-37
gi|90962452|ref|YP_536368.1| Iron-dependent repressor [Lact... 157 5e-37
gi|148544718|ref|YP_001272088.1| iron dependent repressor [... 150 4e-35
gi|92090162|ref|ZP_01275059.1| Iron dependent repressor:Feo... 150 4e-35
gi|94991883|ref|YP_599982.1| Iron-dependent repressor [Stre... 144 4e-33
gi|116494321|ref|YP_806055.1| Mn-dependent transcriptional ... 139 1e-31
gi|81427994|ref|YP_394993.1| Putative metal(Iron)-dependent... 138 2e-31
gi|73663394|ref|YP_302175.1| putative metalloregulator [Sta... 129 9e-29
gi|50954157|ref|YP_061445.1| iron-dependant repressor, DtxR... 128 2e-28
gi|31793964|ref|NP_856457.1| PROBABLE TRANSCRIPTIONAL REPRE... 127 6e-28
gi|118617700|ref|YP_906032.1| transcriptional repressor Sir... 126 7e-28
gi|15609925|ref|NP_217304.1| PROBABLE TRANSCRIPTIONAL REPRE... 126 1e-27
gi|70727261|ref|YP_254177.1| hypothetical protein SH2262 [S... 126 1e-27
gi|145294810|ref|YP_001137631.1| hypothetical protein cgR_0... 125 1e-27
gi|72162065|ref|YP_289722.1| iron dependent repressor [Ther... 125 2e-27
gi|19551873|ref|NP_599875.1| Mn-dependent transcriptional r... 125 2e-27
gi|87310429|ref|ZP_01092559.1| iron repressor protein [Blas... 124 3e-27
gi|146298695|ref|YP_001193286.1| iron dependent repressor [... 124 3e-27
gi|88711384|ref|ZP_01105472.1| iron dependent repressor [Fl... 124 3e-27
gi|91214982|ref|ZP_01251954.1| putative transcriptional reg... 123 7e-27
gi|89889866|ref|ZP_01201377.1| putative Mn- or Fe-dependent... 123 7e-27
gi|150024191|ref|YP_001295017.1| Probable metal-dependent t... 123 9e-27
gi|15923624|ref|NP_371158.1| iron dependent repressor [Stap... 123 9e-27
gi|120403338|ref|YP_953167.1| iron dependent repressor [Myc... 122 1e-26
gi|25027207|ref|NP_737261.1| putative regulatory protein [C... 122 1e-26
gi|108799064|ref|YP_639261.1| iron (metal) dependent repres... 122 2e-26
gi|82750337|ref|YP_416078.1| iron dependent repressor [Stap... 122 2e-26
gi|134102468|ref|YP_001108129.1| iron (metal) dependent rep... 122 2e-26
gi|88802031|ref|ZP_01117559.1| Iron dependent repressor [Po... 121 2e-26
gi|145224606|ref|YP_001135284.1| iron dependent repressor [... 120 5e-26
gi|118465260|ref|YP_882856.1| iron repressor protein [Mycob... 120 6e-26
gi|152964950|ref|YP_001360734.1| iron dependent repressor [... 120 6e-26
gi|116671204|ref|YP_832137.1| iron (metal) dependent repres... 119 1e-25
gi|119963034|ref|YP_948365.1| putative Iron dependent repre... 119 1e-25
gi|88804291|ref|ZP_01119811.1| iron dependent repressor [Ro... 118 3e-25
gi|124009310|ref|ZP_01693989.1| iron dependent repressor [M... 117 6e-25
gi|149277982|ref|ZP_01884121.1| Mn-dependent transcriptiona... 117 6e-25
gi|27467326|ref|NP_763963.1| iron dependent repressor [Stap... 116 1e-24
gi|108803498|ref|YP_643435.1| iron (metal) dependent repres... 116 1e-24
gi|118473748|ref|YP_886989.1| iron repressor protein [Mycob... 115 1e-24
gi|86135190|ref|ZP_01053772.1| putative transcriptional reg... 115 2e-24
gi|126662849|ref|ZP_01733848.1| Mn-dependent transcriptiona... 115 2e-24
gi|54026022|ref|YP_120264.1| putative transcriptional regul... 115 2e-24
gi|156740126|ref|YP_001430255.1| iron (metal) dependent rep... 115 2e-24
gi|15789756|ref|NP_279580.1| SirR [Halobacterium sp. NRC-1]... 114 3e-24
gi|111023611|ref|YP_706583.1| probable Fe(2+)-dependent tra... 114 6e-24
gi|86131327|ref|ZP_01049926.1| Iron dependent repressor [Ce... 113 6e-24
gi|120437529|ref|YP_863215.1| iron dependent repressor [Gra... 113 7e-24
gi|83855826|ref|ZP_00949355.1| putative transcriptional reg... 113 7e-24
gi|119952751|ref|YP_950214.1| putative Iron dependent repre... 112 1e-23
gi|148658625|ref|YP_001278830.1| iron dependent repressor [... 112 1e-23
gi|149369473|ref|ZP_01889325.1| Mn-dependent transcriptiona... 111 4e-23
gi|110637770|ref|YP_677977.1| transcriptional regulator [Cy... 110 6e-23
gi|113938714|ref|ZP_01424579.1| iron dependent repressor [H... 109 9e-23
gi|76802081|ref|YP_327089.1| transcription regulator [Natro... 109 1e-22
gi|78485249|ref|YP_391174.1| Iron dependent repressor [Thio... 109 1e-22
gi|88855886|ref|ZP_01130548.1| putative transcriptional reg... 108 2e-22
gi|86141000|ref|ZP_01059559.1| probable transcriptional rep... 108 3e-22
gi|126645463|ref|ZP_01718007.1| putative transcriptional re... 107 6e-22
gi|94991884|ref|YP_599983.1| Iron-dependent repressor [Stre... 106 9e-22
gi|148273712|ref|YP_001223273.1| hypothetical protein CMM_2... 105 2e-21
gi|110638423|ref|YP_678632.1| Mn-dependent transcriptional ... 105 2e-21
gi|21674552|ref|NP_662617.1| iron-dependent repressor [Chlo... 105 3e-21
gi|83816669|ref|YP_446151.1| iron dependent repressor, puta... 104 3e-21
gi|153895131|ref|ZP_02015714.1| iron dependent repressor [H... 104 3e-21
gi|55377375|ref|YP_135225.1| transcription repressor [Haloa... 104 4e-21
gi|88803088|ref|ZP_01118614.1| putative metal-dependent tra... 104 5e-21
gi|42526731|ref|NP_971829.1| iron-dependent transcriptional... 103 6e-21
gi|149370062|ref|ZP_01889913.1| Mn-dependent transcriptiona... 103 7e-21
gi|156743261|ref|YP_001433390.1| iron (metal) dependent rep... 103 9e-21
gi|126645074|ref|ZP_01717618.1| iron dependent repressor [A... 102 1e-20
gi|154509235|ref|ZP_02044877.1| hypothetical protein ACTODO... 102 1e-20
gi|116662114|ref|YP_829169.1| iron (metal) dependent repres... 102 1e-20
gi|145294200|ref|YP_001137021.1| hypothetical protein cgR_0... 102 1e-20
gi|149176784|ref|ZP_01855395.1| iron-dependent transcriptio... 102 2e-20
gi|68536571|ref|YP_251276.1| manganese-dependent repressor ... 102 2e-20
gi|38233226|ref|NP_938993.1| Putative diphtheria toxin repr... 100 8e-20
gi|15807523|ref|NP_296259.1| iron dependent repressor, puta... 100 1e-19
gi|125624050|ref|YP_001032533.1| transcriptional regulator ... 99 2e-19
gi|116512096|ref|YP_809312.1| Mn-dependent transcriptional ... 97 5e-19
gi|148658078|ref|YP_001278283.1| FeoA family protein [Rosei... 97 5e-19
gi|68552067|ref|ZP_00591460.1| Iron dependent repressor:Feo... 97 8e-19
gi|62424544|ref|ZP_00379689.1| COG1321: Mn-dependent transc... 97 8e-19
gi|67919818|ref|ZP_00513379.1| Iron dependent repressor:Feo... 97 9e-19
gi|62425392|ref|ZP_00380526.1| COG1321: Mn-dependent transc... 96 1e-18
gi|118047649|ref|ZP_01516281.1| FeoA [Chloroflexus aggregan... 96 1e-18
gi|149277010|ref|ZP_01883152.1| transcriptional regulator [... 96 2e-18
gi|76260419|ref|ZP_00768055.1| Iron dependent repressor:Iro... 96 2e-18
gi|118048897|ref|ZP_01517456.1| iron dependent repressor [C... 94 8e-18
gi|15673238|ref|NP_267412.1| metalloregulator [Lactococcus ... 94 8e-18
gi|76258459|ref|ZP_00766114.1| Iron dependent repressor:Feo... 93 1e-17
gi|94986367|ref|YP_605731.1| iron (metal) dependent repress... 92 2e-17
gi|110667522|ref|YP_657333.1| transcription regulator SirR ... 92 2e-17
gi|81253186|ref|ZP_00877746.1| COG1321: Mn-dependent transc... 90 1e-16
gi|15639160|ref|NP_218606.1| cation-activated repressor pro... 88 3e-16
gi|73668133|ref|YP_304148.1| iron dependent repressor [Meth... 88 4e-16
gi|15678242|ref|NP_275357.1| iron repressor [Methanothermob... 87 6e-16
gi|20093126|ref|NP_619201.1| iron dependent repressor [Meth... 87 6e-16
gi|21227136|ref|NP_633058.1| Transcriptional repressor [Met... 86 2e-15
gi|55980723|ref|YP_144020.1| transcriptional repressor [The... 86 2e-15
gi|46198706|ref|YP_004373.1| transcriptional repressor [The... 85 3e-15
gi|116332892|ref|YP_794419.1| Mn-dependent transcriptional ... 85 3e-15
gi|41408993|ref|NP_961829.1| hypothetical protein MAP2895 [... 83 9e-15
gi|150400304|ref|YP_001324071.1| iron dependent repressor [... 83 1e-14
gi|72160653|ref|YP_288310.1| iron dependent repressor [Ther... 83 1e-14
gi|84489257|ref|YP_447489.1| predicted metal-dependent tran... 82 2e-14
gi|68229864|ref|ZP_00569054.1| Iron dependent repressor [Fr... 82 3e-14
gi|148642278|ref|YP_001272791.1| iron dependent transcripti... 82 3e-14
gi|147920271|ref|YP_685959.1| Fe-dependent transcription re... 81 5e-14
gi|86739140|ref|YP_479540.1| iron dependent repressor [Fran... 80 6e-14
gi|126353497|ref|ZP_01710508.1| iron (metal) dependent repr... 80 8e-14
gi|116621297|ref|YP_823453.1| iron (metal) dependent repres... 80 1e-13
gi|145594003|ref|YP_001158300.1| iron dependent repressor [... 79 2e-13
gi|119882702|ref|ZP_01648970.1| iron (metal) dependent repr... 79 3e-13
gi|111220376|ref|YP_711170.1| Iron-dependent repressor [Fra... 78 3e-13
gi|111023768|ref|YP_706740.1| Fe(2+)-dependent transcriptio... 77 6e-13
gi|154241702|ref|ZP_02023264.1| iron dependent repressor [C... 77 6e-13
gi|50841968|ref|YP_055195.1| repressor [Propionibacterium a... 77 7e-13
gi|28493079|ref|NP_787240.1| iron-dependent repressor ideR ... 77 8e-13
gi|91773812|ref|YP_566504.1| iron dependent repressor [Meth... 77 8e-13
gi|13399468|pdb|1FX7|A Chain A, Crystal Structure Of The Ir... 76 1e-12
gi|15609848|ref|NP_217227.1| IRON-DEPENDENT REPRESSOR AND A... 76 1e-12
gi|28572287|ref|NP_789067.1| iron-dependent repressor [Trop... 76 1e-12
gi|118618674|ref|YP_907006.1| iron-dependent repressor and ... 76 2e-12
gi|126009112|ref|ZP_01709682.1| hypothetical protein Faci_0... 76 2e-12
gi|134104576|pdb|2ISY|A Chain A, Crystal Structure Of The N... 75 2e-12
gi|118465346|ref|YP_882781.1| iron-dependent repressor IdeR... 75 2e-12
gi|62391367|ref|YP_226769.1| metal-dependent transcriptiona... 75 2e-12
gi|3891798|pdb|2TDX| Chain , Diphtheria Tox Repressor (C1... 75 2e-12
gi|15827486|ref|NP_301749.1| iron dependent repressor [Myco... 75 2e-12
gi|6573375|pdb|1B1B|A Chain A, Iron Dependent Regulator 75 3e-12
gi|134104578|pdb|2ISZ|A Chain A, Crystal Structure Of A Two... 75 3e-12
gi|134046009|ref|YP_001097495.1| iron dependent repressor [... 75 3e-12
gi|19553726|ref|NP_601728.1| Mn-dependent transcriptional r... 75 3e-12
gi|21222784|ref|NP_628563.1| iron repressor [Streptomyces c... 75 3e-12
gi|145296525|ref|YP_001139346.1| hypothetical protein cgR_2... 75 3e-12
gi|29830398|ref|NP_825032.1| iron dependent regulatory prot... 75 3e-12
gi|38233999|ref|NP_939766.1| diphtheria toxin repressor [Co... 75 3e-12
gi|16975069|pdb|1G3S|A Chain A, Cys102ser Dtxr >gi|16975070... 75 4e-12
gi|150403570|ref|YP_001330864.1| iron dependent repressor [... 75 4e-12
gi|5542114|pdb|1BI1| Chain , Structure Of Apo- And Holo-D... 74 4e-12
gi|54025749|ref|YP_119991.1| putative transcriptional regul... 74 5e-12
gi|76802994|ref|YP_331089.1| transcription regulator [Natro... 74 5e-12
gi|53794452|gb|AAU93783.1| diphtheria toxin repressor [Cory... 74 6e-12
gi|1127152|pdb|1DPR|A Chain A, Diphtheria, Virulence, Dna-B... 74 7e-12
gi|9955138|pdb|1C0W|A Chain A, Crystal Structure Of The Cob... 74 7e-12
gi|7110452|gb|AAF36925.1|AF221951_1 transcriptional regulat... 74 7e-12
gi|53794450|gb|AAU93782.1| diphtheria toxin repressor [Cory... 73 1e-11
gi|48478220|ref|YP_023926.1| iron-dependent repressor [Picr... 73 1e-11
gi|15988215|pdb|1FWZ|A Chain A, Glu20ala Dtxr 72 2e-11
gi|144979|gb|AAA23301.1| diphtheria toxin repressor 72 2e-11
gi|45358194|ref|NP_987751.1| putatuve iron dependent repres... 72 2e-11
gi|119715026|ref|YP_921991.1| iron dependent repressor [Noc... 72 2e-11
gi|117927400|ref|YP_871951.1| iron (metal) dependent repres... 72 2e-11
gi|13541769|ref|NP_111457.1| Metal-dependent transcription ... 72 2e-11
gi|53794448|gb|AAU93781.1| diphtheria toxin repressor [Cory... 72 2e-11
gi|14325183|dbj|BAB60108.1| hypohtetical protein [Thermopla... 72 3e-11
gi|144981|gb|AAA23302.1| diphtheria toxin repressor 72 3e-11
gi|108799143|ref|YP_639340.1| iron (metal) dependent repres... 72 3e-11
gi|10334814|gb|AAG16749.1|AF277002_1 iron dependent regulat... 72 3e-11
gi|124027060|ref|YP_001012380.1| predicted Iron dependent r... 71 3e-11
gi|120403440|ref|YP_953269.1| iron dependent repressor [Myc... 71 4e-11
gi|118468273|ref|YP_887081.1| iron-dependent repressor IdeR... 71 4e-11
gi|118194728|gb|ABK77646.1| Mn-dependent transcriptional re... 71 4e-11
gi|16975074|pdb|1G3Y|A Chain A, Arg80ala Dtxr 71 5e-11
gi|49258436|pdb|1P92|A Chain A, Crystal Structure Of (H79a)... 70 8e-11
gi|145224530|ref|YP_001135208.1| iron dependent repressor [... 70 8e-11
gi|899422|emb|CAA90388.1| iron repressor [Streptomyces pilo... 70 9e-11
gi|70605960|ref|YP_254830.1| iron dependent repressor [Sulf... 70 1e-10
gi|116669359|ref|YP_830292.1| iron (metal) dependent repres... 70 1e-10
gi|75765466|pdb|1XCV|A Chain A, Crystal Structure Of (H79ac... 70 1e-10
gi|152967496|ref|YP_001363280.1| iron dependent repressor [... 69 1e-10
gi|76261248|ref|ZP_00768865.1| Iron dependent repressor [Ch... 69 1e-10
gi|116751185|ref|YP_847872.1| iron (metal) dependent repres... 69 2e-10
gi|1171105|gb|AAA86056.1| similar to the Corynebacterium di... 69 2e-10
gi|68536174|ref|YP_250879.1| iron-dependent repressor DtxR ... 69 2e-10
gi|145295825|ref|YP_001138646.1| hypothetical protein cgR_1... 69 2e-10
gi|88855702|ref|ZP_01130365.1| iron-dependent repressor, Dx... 68 3e-10
gi|15897577|ref|NP_342182.1| Iron-dependent repressor [Sulf... 68 4e-10
gi|19553124|ref|NP_601126.1| Mn-dependent transcriptional r... 68 4e-10
gi|110638426|ref|YP_678635.1| Mn2+/Zn2+ ABC transporter, pe... 67 5e-10
gi|154507891|ref|ZP_02043533.1| hypothetical protein ACTODO... 67 7e-10
gi|146304764|ref|YP_001192080.1| FeoA family protein [Metal... 67 7e-10
gi|116751025|ref|YP_847712.1| iron (metal) dependent repres... 67 1e-09
gi|25028368|ref|NP_738422.1| diptheria toxin repressor [Cor... 67 1e-09
gi|10835556|pdb|1F5T|A Chain A, Diphtheria Tox Repressor (C... 66 1e-09
gi|119961741|ref|YP_946806.1| putative iron-dependent repre... 66 1e-09
gi|88911292|sp|Q8FPG6|DTXR_COREF Diphtheria toxin repressor... 66 1e-09
gi|119713749|gb|ABL97798.1| iron dependent transcriptional ... 65 2e-09
gi|84498530|ref|ZP_00997300.1| iron-dependent repressor, Dx... 65 2e-09
gi|15678956|ref|NP_276073.1| iron repressor [Methanothermob... 65 3e-09
gi|34365044|emb|CAD62182.1| mtuR protein [Streptococcus ube... 64 6e-09
gi|50955348|ref|YP_062636.1| iron-dependent repressor, DxtR... 64 7e-09
gi|608593|gb|AAA91345.1| diphtheria toxin repressor 63 1e-08
gi|89896513|ref|YP_520000.1| hypothetical protein DSY3767 [... 63 2e-08
gi|21222420|ref|NP_628199.1| iron dependent repressor [Stre... 63 2e-08
gi|16752695|ref|NP_444962.1| ABC transporter, permease prot... 62 2e-08
gi|15618262|ref|NP_224547.1| Integral Membrane Protein [Chl... 62 2e-08
gi|118444274|ref|YP_878382.1| iron-dependent transcriptiona... 62 3e-08
gi|23099355|ref|NP_692821.1| manganese transport transcript... 62 3e-08
gi|126180428|ref|YP_001048393.1| iron dependent repressor [... 61 5e-08
gi|14590990|ref|NP_143065.1| hypothetical protein PH1163 [P... 61 5e-08
gi|15615370|ref|NP_243673.1| manganese transport transcript... 61 5e-08
gi|148273651|ref|YP_001223212.1| putative iron-dependent re... 60 6e-08
gi|147678275|ref|YP_001212490.1| Mn-dependent transcription... 60 7e-08
gi|148378317|ref|YP_001252858.1| iron dependent repressor [... 60 7e-08
gi|14521277|ref|NP_126752.1| iron-dependent repressor [Pyro... 60 7e-08
gi|150015165|ref|YP_001307419.1| iron dependent repressor [... 60 8e-08
gi|58581829|ref|YP_200845.1| iron dependent repressor [Xant... 59 2e-07
gi|57233538|ref|YP_180848.1| iron dependent repressor, puta... 59 2e-07
gi|84503197|ref|ZP_01001282.1| hypothetical protein OB2597_... 59 2e-07
gi|15895874|ref|NP_349223.1| Predicted iron-dependent trans... 59 2e-07
gi|15922357|ref|NP_378026.1| hypothetical diphtheria toxin ... 59 2e-07
gi|87310377|ref|ZP_01092507.1| hypothetical protein DSM3645... 59 2e-07
gi|57640042|ref|YP_182520.1| manganese-dependent transcript... 59 2e-07
gi|84686763|ref|ZP_01014650.1| hypothetical protein RB2654_... 59 2e-07
gi|16081924|ref|NP_394331.1| iron-dependent transcription r... 59 3e-07
gi|149179644|ref|ZP_01858149.1| manganese transport transcr... 59 3e-07
gi|78047754|ref|YP_363929.1| manganese-dependent transcript... 58 4e-07
gi|150018881|ref|YP_001311135.1| iron dependent repressor [... 58 4e-07
gi|85059528|ref|YP_455230.1| transcriptional regulator [Sod... 58 4e-07
gi|65321590|ref|ZP_00394549.1| COG1321: Mn-dependent transc... 58 4e-07
gi|84623732|ref|YP_451104.1| iron dependent repressor [Xant... 58 4e-07
gi|21242781|ref|NP_642363.1| iron dependent repressor [Xant... 58 4e-07
gi|56420951|ref|YP_148269.1| manganese transport transcript... 58 4e-07
gi|62425787|ref|ZP_00380918.1| COG1321: Mn-dependent transc... 57 6e-07
gi|75761454|ref|ZP_00741421.1| Transcriptional regulator mn... 57 6e-07
gi|126179728|ref|YP_001047693.1| FeoA family protein [Metha... 57 6e-07
gi|138895986|ref|YP_001126439.1| Iron-dependent repressor f... 57 6e-07
gi|134300554|ref|YP_001114050.1| iron dependent repressor [... 57 6e-07
gi|153899447|ref|ZP_02020011.1| iron dependent repressor [M... 57 7e-07
gi|52080985|ref|YP_079776.1| manganese transport transcript... 57 7e-07
gi|94968894|ref|YP_590942.1| ABC transporter, ATPase subuni... 57 7e-07
gi|94266215|ref|ZP_01289923.1| Iron dependent repressor [de... 57 7e-07
gi|56964252|ref|YP_175983.1| manganese transport transcript... 57 7e-07
gi|47569463|ref|ZP_00240144.1| iron-dependent repressor [Ba... 57 7e-07
gi|21231609|ref|NP_637526.1| iron dependent repressor [Xant... 57 8e-07
gi|15834960|ref|NP_296719.1| ABC transporter, permease prot... 57 8e-07
gi|152976607|ref|YP_001376124.1| iron dependent repressor [... 57 1e-06
gi|30264279|ref|NP_846656.1| manganese transport transcript... 57 1e-06
gi|89207044|ref|ZP_01185593.1| Iron dependent repressor [Ba... 57 1e-06
gi|30022287|ref|NP_833918.1| manganese transport transcript... 57 1e-06
gi|13472263|ref|NP_103830.1| hypothetical protein mll2499 [... 57 1e-06
gi|154686715|ref|YP_001421876.1| MntR [Bacillus amyloliquef... 57 1e-06
gi|62185054|ref|YP_219839.1| ABC transporter, membrane perm... 56 1e-06
gi|15604788|ref|NP_219572.1| Integral Membrane Protein [Chl... 56 1e-06
gi|153895478|ref|ZP_02016060.1| iron dependent repressor [H... 56 1e-06
gi|15668748|ref|NP_247547.1| iron dependent repressor [Meth... 56 1e-06
gi|46202768|ref|ZP_00052650.2| COG1321: Mn-dependent transc... 56 1e-06
gi|10334817|gb|AAG16751.1|AF277296_1 iron dependent regulat... 56 1e-06
gi|34811004|pdb|1ON1|A Chain A, Bacillus Subtilis Manganese... 56 1e-06
gi|118727198|ref|ZP_01575806.1| iron dependent repressor [C... 56 2e-06
gi|154242457|ref|ZP_02024019.1| iron dependent repressor [C... 56 2e-06
gi|18977223|ref|NP_578580.1| iron-dependent repressor [Pyro... 56 2e-06
gi|118047925|ref|ZP_01516549.1| iron dependent repressor [C... 56 2e-06
gi|29840201|ref|NP_829307.1| ABC transporter, permease prot... 55 2e-06
gi|116873313|ref|YP_850094.1| transcriptional regulator [Li... 55 2e-06
gi|150401894|ref|YP_001325660.1| iron dependent repressor [... 55 2e-06
gi|89101028|ref|ZP_01173870.1| manganese transport transcri... 55 2e-06
gi|88601769|ref|YP_501947.1| iron dependent repressor [Meth... 55 2e-06
gi|16079508|ref|NP_390332.1| manganese transport transcript... 55 3e-06
gi|89898375|ref|YP_515485.1| ABC transporter of metals [Chl... 55 3e-06
gi|83955795|ref|ZP_00964337.1| hypothetical protein NAS141_... 55 3e-06
gi|68054417|ref|ZP_00538574.1| Iron dependent repressor [Ex... 55 3e-06
gi|15789751|ref|NP_279575.1| TroR [Halobacterium sp. NRC-1]... 55 3e-06
gi|16801057|ref|NP_471325.1| manganese transport transcript... 55 3e-06
gi|119389993|pdb|2HYF|A Chain A, The Structure Of Apo-Mntr ... 55 3e-06
gi|15810674|gb|AAL08587.1|AF299114_3 putative iron-dependen... 55 3e-06
gi|156867932|gb|EDO61304.1| hypothetical protein CLOLEP_016... 55 4e-06
gi|148261660|ref|YP_001235787.1| iron dependent repressor [... 55 4e-06
gi|58040496|ref|YP_192460.1| Transcriptional regulator MntR... 55 4e-06
gi|110347218|ref|YP_666036.1| iron (metal) dependent repres... 55 4e-06
gi|16803917|ref|NP_465402.1| manganese transport transcript... 55 4e-06
gi|85706999|ref|ZP_01038088.1| hypothetical protein ROS217_... 54 5e-06
gi|15922567|ref|NP_378236.1| hypothetical transcription rep... 54 5e-06
gi|149204460|ref|ZP_01881426.1| DNA-binding transcriptional... 54 6e-06
gi|153005109|ref|YP_001379434.1| iron dependent repressor [... 54 6e-06
gi|71892170|ref|YP_277902.1| transcriptional regulator of m... 54 6e-06
gi|109645705|ref|ZP_01369625.1| iron dependent repressor [D... 54 9e-06
>gi|24378700|ref|NP_720655.1| putative metal-dependent transcriptional regulator [Streptococcus
mutans UA159]
gi|8925940|gb|AAF81675.1|AF232688_4 SloR [Streptococcus mutans]
gi|24376564|gb|AAN57961.1|AE014869_6 putative metal-dependent transcriptional regulator [Streptococcus
mutans UA159]
Length = 217
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL
Sbjct: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP
Sbjct: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR
Sbjct: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKAY 217
LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKAY
Sbjct: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKAY 217
>gi|6694218|gb|AAF25184.1|AF182402_1 metalloregulator ScaR [Streptococcus gordonii]
gi|157075718|gb|ABV10401.1| ScaR Manganese-dependent regulator of scaCBA [Streptococcus
gordonii str. Challis substr. CH1]
Length = 215
Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats.
Identities = 132/214 (61%), Positives = 168/214 (78%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK +YEL R KI+NK+IA+ M VS PAV+EM+KKLL E+L++KDK+AGYL
Sbjct: 1 MTPNKEDYLKCLYELGTRHNKITNKEIAQLMQVSPPAVTEMMKKLLAEELLIKDKKAGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G L S LYRKHRLIEVFL++HL YT +EIHEEAEVLEHTVSD FVERLD+ L+YP
Sbjct: 61 LTDLGLKLVSDLYRKHRLIEVFLVHHLGYTTEEIHEEAEVLEHTVSDHFVERLDQLLDYP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGGTIP G+ LVE+++ TL+ E G Y+L RV DNF LL Y+E++ L++G +R
Sbjct: 121 KACPHGGTIPAKGELLVEKHKLTLEEAKEKGDYILARVHDNFDLLTYLERNGLQVGKTIR 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
L YD F+ Y++E DG+++Q+ +A QIY+EK
Sbjct: 181 FLGYDDFSHLYSLEVDGQEIQLAQPIAQQIYVEK 214
>gi|94989879|ref|YP_597979.1| Iron-dependent repressor [Streptococcus pyogenes MGAS10270]
gi|94543387|gb|ABF33435.1| Iron-dependent repressor [Streptococcus pyogenes MGAS10270]
Length = 215
Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats.
Identities = 123/212 (58%), Positives = 159/212 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK LN+P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILNFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNITTLNTITELGRFRLSRIHDHFDLIQYLEAHHLNINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI D + L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYDDKDLIIPENIAKQLYV 212
>gi|15903523|ref|NP_359073.1| Metalloregulator [Streptococcus pneumoniae R6]
gi|116516746|ref|YP_816907.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
D39]
gi|149021271|ref|ZP_01835517.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP23-BS72]
gi|15459139|gb|AAL00284.1| Metalloregulator [Streptococcus pneumoniae R6]
gi|116077322|gb|ABJ55042.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
D39]
gi|147930372|gb|EDK81356.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP23-BS72]
Length = 216
Score = 248 bits (632), Expect = 2e-64, Method: Composition-based stats.
Identities = 126/214 (58%), Positives = 161/214 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ KI+NK+IA +M VS PAV+EM+K++ E+L+LKDK+ GYL
Sbjct: 1 MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G L S LYRKHRLIEVFL++HL+YT+D+IHEEAEVLEHTVSD+FVERLDK L +P
Sbjct: 61 LTDLGLKLVSELYRKHRLIEVFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGGTIP G+ LVE L + E G Y L RV DNF +L Y+++H L IGD+L+
Sbjct: 121 KTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDNFDILHYLDKHSLHIGDQLQ 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ ++D F+ +TI + E LQV +A Q+Y+EK
Sbjct: 181 VKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEK 214
>gi|77406811|ref|ZP_00783844.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
H36B]
gi|77408294|ref|ZP_00785036.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
COH1]
gi|77173057|gb|EAO76184.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
COH1]
gi|77174593|gb|EAO77429.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
H36B]
Length = 215
Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats.
Identities = 126/212 (59%), Positives = 166/212 (78%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK I+EL E++ KISNK+IAE M VSAPAVSEM+KK++ E L++KDK GY
Sbjct: 1 MTPNKEDYLKCIHELGEKNNKISNKKIAEMMQVSAPAVSEMIKKMISEQLIVKDKDLGYY 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LTK+G ++ S LYRKHRL+EVFL+NHL+YTAD+IHEEAEVLEHTVS FV++L+K L++P
Sbjct: 61 LTKQGLLVVSDLYRKHRLVEVFLVNHLHYTADDIHEEAEVLEHTVSTTFVDQLEKLLDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGGTIP+ G+ LVE + TL ++++G Y++ RV D+FQLLKY+EQH L I D +
Sbjct: 121 QFCPHGGTIPKKGEFLVEINQMTLDQISQLGTYVISRVHDDFQLLKYLEQHRLHINDTIE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D +A Y I + E L + +ASQIY+
Sbjct: 181 LTQIDPYAKTYHITYNDENLTIPERIASQIYV 212
>gi|21909853|ref|NP_664121.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes MGAS315]
gi|28896452|ref|NP_802802.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes SSI-1]
gi|21904040|gb|AAM78924.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes MGAS315]
gi|28811703|dbj|BAC64635.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes SSI-1]
Length = 215
Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats.
Identities = 121/212 (57%), Positives = 159/212 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLETHHLNINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|71903022|ref|YP_279825.1| iron-dependent repressor [Streptococcus pyogenes MGAS6180]
gi|94988001|ref|YP_596102.1| iron-dependent repressor [Streptococcus pyogenes MGAS9429]
gi|71802117|gb|AAX71470.1| iron-dependent repressor [Streptococcus pyogenes MGAS6180]
gi|94541509|gb|ABF31558.1| iron-dependent repressor [Streptococcus pyogenes MGAS9429]
Length = 215
Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats.
Identities = 121/212 (57%), Positives = 159/212 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLEAHHLSINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|94993765|ref|YP_601863.1| Iron-dependent repressor [Streptococcus pyogenes MGAS10750]
gi|94547273|gb|ABF37319.1| Iron-dependent repressor [Streptococcus pyogenes MGAS10750]
Length = 215
Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats.
Identities = 121/212 (57%), Positives = 159/212 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLETHHLNINAELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|50913737|ref|YP_059709.1| Iron-dependent repressor [Streptococcus pyogenes MGAS10394]
gi|139474306|ref|YP_001129022.1| metal-dependent transcriptional regulator [Streptococcus pyogenes
str. Manfredo]
gi|50902811|gb|AAT86526.1| Iron-dependent repressor [Streptococcus pyogenes MGAS10394]
gi|134272553|emb|CAM30819.1| metal-dependent transcriptional regulator [Streptococcus pyogenes
str. Manfredo]
Length = 215
Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats.
Identities = 121/212 (57%), Positives = 159/212 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQETKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLETHHLNINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|19745579|ref|NP_606715.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes MGAS8232]
gi|19747703|gb|AAL97214.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes MGAS8232]
Length = 215
Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats.
Identities = 121/212 (57%), Positives = 158/212 (74%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQETKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL+ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIRQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLETHHLNINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|71910180|ref|YP_281730.1| iron-dependent repressor [Streptococcus pyogenes MGAS5005]
gi|71852962|gb|AAZ50985.1| iron-dependent repressor [Streptococcus pyogenes MGAS5005]
Length = 215
Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats.
Identities = 121/212 (57%), Positives = 159/212 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRKHRLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKHRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDSFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLEAHHLNINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|22537677|ref|NP_688528.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
2603V/R]
gi|25011631|ref|NP_736026.1| hypothetical protein gbs1590 [Streptococcus agalactiae NEM316]
gi|76787262|ref|YP_330163.1| iron-dependent repressor [Streptococcus agalactiae A909]
gi|76799598|ref|ZP_00781720.1| metalloregulator [Streptococcus agalactiae 18RS21]
gi|77413436|ref|ZP_00789628.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
515]
gi|22534565|gb|AAN00401.1|AE014262_6 iron-dependent transcriptional regulator [Streptococcus agalactiae
2603V/R]
gi|24413171|emb|CAD47249.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562319|gb|ABA44903.1| iron-dependent repressor [Streptococcus agalactiae A909]
gi|76585053|gb|EAO61689.1| metalloregulator [Streptococcus agalactiae 18RS21]
gi|77160530|gb|EAO71649.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
515]
Length = 215
Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats.
Identities = 125/212 (58%), Positives = 165/212 (77%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNK DYLK I+EL E++ KISNK+IAE M VSAPAVSEM+KK++ E L++KDK GY
Sbjct: 1 MTPNKADYLKCIHELGEKNNKISNKKIAEMMQVSAPAVSEMIKKMISEQLIVKDKDLGYY 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LTK+G ++ S LYRKHRL+EVFL+NHL+YTAD+IHEEAEVLEHTVS FV++L+K L++P
Sbjct: 61 LTKQGLLVVSDLYRKHRLVEVFLVNHLHYTADDIHEEAEVLEHTVSTTFVDQLEKLLDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGGTIP+ G+ LVE + TL ++++G Y++ RV D+FQLLKY+EQH L I D +
Sbjct: 121 QFCPHGGTIPKKGEFLVEINQMTLDQISQLGTYVISRVHDDFQLLKYLEQHRLHINDTIE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D +A Y I + E L + +ASQIY+
Sbjct: 181 LTQIDPYAKTYHITYNDENLTIPERIASQIYV 212
>gi|148997687|ref|ZP_01825251.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP11-BS70]
gi|147756186|gb|EDK63228.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP11-BS70]
Length = 216
Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats.
Identities = 125/214 (58%), Positives = 161/214 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ KI+NK+IA +M VS PAV+EM+K++ E+L+LKDK+ GYL
Sbjct: 1 MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G L S LYRKHRLIEVFL++HL+YT+D+IHEEAEVLEHTVSD+FVERLDK L +P
Sbjct: 61 LTDLGLKLVSELYRKHRLIEVFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGGTIP G+ LVE L + E G Y L RV D+F +L Y+++H L IGD+L+
Sbjct: 121 KTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDSFDILHYLDKHSLHIGDQLQ 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ ++D F+ +TI + E LQV +A Q+Y+EK
Sbjct: 181 VKQFDGFSNTFTILSNDEDLQVNMVIAKQLYVEK 214
>gi|15901474|ref|NP_346078.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
TIGR4]
gi|148984071|ref|ZP_01817366.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP3-BS71]
gi|148988682|ref|ZP_01820115.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP6-BS73]
gi|148994889|ref|ZP_01823910.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP9-BS68]
gi|149001912|ref|ZP_01826866.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP14-BS69]
gi|149006706|ref|ZP_01830392.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP18-BS74]
gi|149011506|ref|ZP_01832753.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP19-BS75]
gi|14973128|gb|AAK75718.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
TIGR4]
gi|147759721|gb|EDK66711.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP14-BS69]
gi|147761621|gb|EDK68585.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP18-BS74]
gi|147764496|gb|EDK71427.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP19-BS75]
gi|147923360|gb|EDK74473.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP3-BS71]
gi|147925883|gb|EDK76958.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP6-BS73]
gi|147926957|gb|EDK78002.1| iron-dependent transcriptional regulator [Streptococcus pneumoniae
SP9-BS68]
Length = 216
Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats.
Identities = 125/214 (58%), Positives = 161/214 (75%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ KI+NK+IA +M VS PAV+EM+K++ E+L+LKDK+ GYL
Sbjct: 1 MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G L S LYRKHRLIEVFL++HL+YT+D+IHEEAEVLEHTVSD+FVERLDK L +P
Sbjct: 61 LTDLGLKLVSELYRKHRLIEVFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGGTIP G+ LVE L + E G Y L RV D+F +L Y+++H L IGD+L+
Sbjct: 121 KTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDSFDILHYLDKHSLHIGDQLQ 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ ++D F+ +TI + E LQV +A Q+Y+EK
Sbjct: 181 VKQFDGFSNTFTILSNDEDLQVNMDIAKQLYVEK 214
>gi|77411388|ref|ZP_00787735.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
CJB111]
gi|77162561|gb|EAO73525.1| iron-dependent transcriptional regulator [Streptococcus agalactiae
CJB111]
Length = 215
Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats.
Identities = 125/212 (58%), Positives = 166/212 (78%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK I+EL E++ KISNK+IAE M VSAPAVSEM+KK++ E L++KDK GY
Sbjct: 1 MTPNKEDYLKCIHELGEKNNKISNKKIAEMMQVSAPAVSEMIKKMISEQLIVKDKDLGYY 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LTK+G ++ S LYRKHRL+EVFL+NHL+YTAD+IH+EAEVLEHTVS FV++L+K L++P
Sbjct: 61 LTKQGLLVVSDLYRKHRLVEVFLVNHLHYTADDIHKEAEVLEHTVSTTFVDQLEKLLDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGGTIP+ G+ LVE + TL ++++G Y++ RV D+FQLLKY+EQH L I D +
Sbjct: 121 QFCPHGGTIPKKGEFLVEINQMTLDQISQLGTYVISRVHDDFQLLKYLEQHRLHINDTIE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D +A Y I + E L + +ASQIY+
Sbjct: 181 LTQIDPYAKTYHIIYNDENLTIPERIASQIYV 212
>gi|125717132|ref|YP_001034265.1| Metalloregulator ScaR (Fe/Mn-dependent transcriptional repressor),
putative [Streptococcus sanguinis SK36]
gi|125497049|gb|ABN43715.1| Metalloregulator ScaR (Fe/Mn-dependent transcriptional repressor),
putative [Streptococcus sanguinis SK36]
Length = 215
Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats.
Identities = 127/214 (59%), Positives = 167/214 (78%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ R +KI+NK+IA+ M VS PAV+EM+KK+L E+L++KDK+AGYL
Sbjct: 1 MTPNKEDYLKCIYEIGSRHKKITNKEIAQLMQVSPPAVTEMMKKMLAEELLVKDKKAGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G L S LYRKHRLIEVFL+NHL Y+ DEIHEEAEVLEHTVS+ FVERLD L YP
Sbjct: 61 LTDLGLRLVSDLYRKHRLIEVFLVNHLGYSTDEIHEEAEVLEHTVSERFVERLDAMLQYP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGGTIP G+ L E + TL+ + G Y++KRV D+F LLKY+E+++L+IG +
Sbjct: 121 KTCPHGGTIPAKGELLDEENQLTLEEASAPGDYIIKRVHDDFDLLKYLEKYNLQIGQTIT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
++YD+FA AY ++ + +++Q+ +A QIY+EK
Sbjct: 181 FIQYDSFAQAYLLKTETQEIQINPIIAQQIYVEK 214
>gi|15674572|ref|NP_268746.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes M1 GAS]
gi|13621680|gb|AAK33467.1| putative metal-dependent transcriptional regulator [Streptococcus
pyogenes M1 GAS]
Length = 215
Score = 243 bits (619), Expect = 7e-63, Method: Composition-based stats.
Identities = 120/212 (56%), Positives = 158/212 (74%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L KG L ++LYRK RLIEVFL++ L Y E+H+EAEVLEHTVSD F++RLDK L++P
Sbjct: 61 LKDKGYALVANLYRKLRLIEVFLIHQLGYNTQEVHQEAEVLEHTVSDSFIDRLDKILDFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGGTIP++GQPLVE TTL +TE+G + L R+ D+F L++Y+E HHL I EL
Sbjct: 121 DFCPHGGTIPRYGQPLVEMNTTTLNTITELGRFRLSRIHDHFDLIQYLEAHHLNINTELT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L + D FA YTI ++L + +A Q+Y+
Sbjct: 181 LTQIDTFAKTYTICYGDKELVIPENIAKQLYV 212
>gi|146319741|ref|YP_001199453.1| putative metal-dependent transcriptional regulator [Streptococcus
suis 05ZYH33]
gi|146321938|ref|YP_001201649.1| putative metal-dependent transcriptional regulator [Streptococcus
suis 98HAH33]
gi|145690547|gb|ABP91053.1| putative metal-dependent transcriptional regulator [Streptococcus
suis 05ZYH33]
gi|145692744|gb|ABP93249.1| putative metal-dependent transcriptional regulator [Streptococcus
suis 98HAH33]
Length = 219
Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats.
Identities = 125/214 (58%), Positives = 164/214 (76%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYEL + D+KI+NK IAEKM+ SAPAVSEM+KK++ E+L+ KD +AGYL
Sbjct: 1 MTPNKEDYLKCIYELGQLDQKITNKLIAEKMAFSAPAVSEMLKKMVAEELISKDAKAGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L++ + +SLYRKHRLIEVFL+ L Y+ +E+HEEAE+LEHTVSD F+ RLD L P
Sbjct: 61 LSQTALEMVASLYRKHRLIEVFLVEQLGYSPEEVHEEAEILEHTVSDHFINRLDLLLEQP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG+IPQ GQPL+ERY+T L +TE G Y L R+ D +QLL+Y+EQH L +GD L
Sbjct: 121 QTCPHGGSIPQAGQPLIERYQTRLSQLTETGNYQLVRIHDFYQLLQYLEQHELAVGDLLT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ +D FA TI+ ++L V +A+A Q++IEK
Sbjct: 181 VTAFDQFAQTITIQYKDKELAVPTAIAQQLFIEK 214
>gi|111657545|ref|ZP_01408286.1| hypothetical protein SpneT_02001267 [Streptococcus pneumoniae
TIGR4]
Length = 183
Score = 218 bits (554), Expect = 3e-55, Method: Composition-based stats.
Identities = 112/181 (61%), Positives = 140/181 (77%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ KI+NK+IA +M VS PAV+EM+K++ E+L+LKDK+ GYL
Sbjct: 1 MTPNKEDYLKCIYEIGIDLHKITNKEIAARMQVSPPAVTEMIKRMKSENLILKDKECGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G L S LYRKHRLIEVFL++HL+YT+D+IHEEAEVLEHTVSD+FVERLDK L +P
Sbjct: 61 LTDLGLKLVSELYRKHRLIEVFLVHHLDYTSDQIHEEAEVLEHTVSDLFVERLDKLLGFP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGGTIP G+ LVE L + E G Y L RV D+F +L Y+++H L IGD+L+
Sbjct: 121 KTCPHGGTIPAKGELLVEINNLPLADIKEAGAYRLTRVHDSFDILHYLDKHSLHIGDQLQ 180
Query: 181 L 181
+
Sbjct: 181 V 181
>gi|29375587|ref|NP_814741.1| iron-dependent repressor [Enterococcus faecalis V583]
gi|15425978|gb|AAK97638.1|AF409093_1 metalloregulatory protein EfaR [Enterococcus faecalis]
gi|29343048|gb|AAO80811.1| iron-dependent repressor [Enterococcus faecalis V583]
Length = 222
Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 134/213 (62%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPN+EDYLK+I+EL + K++NKQI + VSA +VSEM+ KL+ EDLV G
Sbjct: 1 MTPNREDYLKLIFELGGDEVKVNNKQIVSGLDVSAASVSEMISKLVKEDLVEHSPYQGVQ 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+KG AS+L RKHR+ EVFL+ HLNYT +++HEEAEVLEH S V RL +LN+P
Sbjct: 61 LTEKGLKKASTLIRKHRIWEVFLVEHLNYTWNDVHEEAEVLEHVTSQTLVNRLADYLNHP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG IP+ QP+ E R TL + RV D +LL Y+ L I +E
Sbjct: 121 EFCPHGGVIPEDNQPIHEEKRQTLTDYPVGTKIRIARVLDEKELLDYLVSIDLNIQEEYT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ E A+ G TI + ++L V+ A+ I++E
Sbjct: 181 IKEIAAYEGPITIYNENKELSVSFKAANTIFVE 213
>gi|69244702|ref|ZP_00602966.1| Iron dependent repressor:FeoA [Enterococcus faecium DO]
gi|68196293|gb|EAN10722.1| Iron dependent repressor:FeoA [Enterococcus faecium DO]
Length = 215
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 135/214 (63%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPN+EDYLKII EL K++NKQI + VSA +VSEM+ KL+ E+LV G
Sbjct: 1 MTPNREDYLKIILELGGDTTKVNNKQIVSSLDVSAASVSEMISKLVKEELVEHSPYQGVQ 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G ASSL RKHRL EVFL+ HL+Y+ +E+H++AEVLEH S+ + L+ +LN+P
Sbjct: 61 LTASGLQKASSLIRKHRLWEVFLVEHLDYSWNEVHDDAEVLEHVTSEHLADHLENYLNHP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG+IP+ + + E R TL+ + RV D +LL Y+ L I +E
Sbjct: 121 EHCPHGGSIPKKEEVVHEERRQTLESYPVGTKVRIARVLDEKELLDYLVTIDLNINEEYE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+++ A+ G TI+ D +++ V+ AS I+++K
Sbjct: 181 IVDIAAYEGPITIQNDRKKIPVSFKAASTIFVDK 214
>gi|16118833|gb|AAL14619.1|AF417113_4 putative iron dependent repressor [Enterococcus mundtii]
Length = 215
Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 130/214 (60%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPN+EDYLKII EL K++NKQI ++VS +VSEM+ KL+ E LV G
Sbjct: 1 MTPNREDYLKIILELGGDTTKVNNKQIVSSLAVSPASVSEMISKLVKEKLVEHSPYQGVQ 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G I ASSL RKHRL EVFL+ HL+Y +E+H++AEVLEH S+ + L+ +LN+P
Sbjct: 61 LTDSGLIKASSLIRKHRLWEVFLVEHLDYNWNEVHDDAEVLEHVTSEQLADHLESYLNHP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGG IP+ Q + E R TL+ + RV D +LL Y+ + I +
Sbjct: 121 KHCPHGGIIPKKEQVVHEERRQTLESYPVGTKIRIARVLDEKELLDYLVTIDVNIDETYE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ + A+ G TI+ +++ V+ AS I+++K
Sbjct: 181 ITDVAAYEGPITIQNKTKKIPVSFKAASTIFVDK 214
>gi|116334289|ref|YP_795816.1| Mn-dependent transcriptional regulator [Lactobacillus brevis ATCC
367]
gi|116099636|gb|ABJ64785.1| Mn-dependent transcriptional regulator [Lactobacillus brevis ATCC
367]
Length = 215
Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 124/215 (57%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTP KEDYLKII+EL R +K+SNKQIA ++++A +V+EMV K+ E L AG
Sbjct: 1 MTPMKEDYLKIIFELGGRQKKVSNKQIAISLNIAAGSVTEMVNKMAAEGLAEHTPYAGIS 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G LA L RKHR+ E FL+ L Y ++H+EAEVLEH S ++ LD L P
Sbjct: 61 LTNRGIRLAEDLVRKHRIWEDFLVEKLGYALPDVHDEAEVLEHVTSPKLIDALDDMLGNP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGG IP E T L + + + R DN LL Y+ L IGD+L+
Sbjct: 121 THCPHGGVIPDRQGHYHEDSHTVLNDAADGEIVTVDRFIDNHDLLTYLGDLKLDIGDQLK 180
Query: 181 LLEYDAFAGAYTIEK--DGEQLQVTSAVASQIYIE 213
+L++D F G T++ D +L V+ A I+++
Sbjct: 181 VLKHDPFEGPVTVQNLTDNAELIVSYKAAHYIFVK 215
>gi|28377808|ref|NP_784700.1| metal-dependent regulator [Lactobacillus plantarum WCFS1]
gi|28270641|emb|CAD63547.1| metal-dependent regulator [Lactobacillus plantarum WCFS1]
Length = 215
Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats.
Identities = 91/215 (42%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTP KEDYLKII+EL +K+SNKQIA + ++A +V+EMV KL+ E L AG
Sbjct: 1 MTPMKEDYLKIIFELGGTKKKVSNKQIALSLDIAAGSVTEMVGKLVQEGLAKHTPYAGIS 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LTKKG A +L RKHR+ E FL++ L+Y ++H EAEVLEH S+ V+ L+ FL P
Sbjct: 61 LTKKGIRYAETLVRKHRIWEDFLVDKLDYDLPDVHTEAEVLEHVTSERLVDSLEAFLGNP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGG IP E +L + ++R DN LL Y+ LKIG ++
Sbjct: 121 THCPHGGAIPDKDGHYQEDSHVSLADTQDGTTVTIERFIDNHDLLVYLHDTPLKIGQQVT 180
Query: 181 LLEYDAFAGAYT--IEKDGEQLQVTSAVASQIYIE 213
+L++D F G T I+K GE++ V+ A ++++
Sbjct: 181 VLKHDPFEGPVTVSIQKTGEEIPVSYKAAHNVFVK 215
>gi|90962452|ref|YP_536368.1| Iron-dependent repressor [Lactobacillus salivarius subsp.
salivarius UCC118]
gi|90821646|gb|ABE00285.1| Iron-dependent repressor [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 215
Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats.
Identities = 91/215 (42%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTP KEDYLKII+EL +K+SNKQIA ++V+A +V+EMV KL+ E L AG
Sbjct: 1 MTPKKEDYLKIIFELGGTKKKVSNKQIAMSLNVAAGSVTEMVNKLVKEGLAAHTPYAGIS 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G +A L R+HRL E FL+ L+Y E+H+EAEVLEH SD +++LD+FLN P
Sbjct: 61 LTDEGIEVAEKLVRRHRLWETFLVEKLDYQLSEVHDEAEVLEHVASDKLMKKLDQFLNSP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG IP E L + + R DN +LL Y++ LK+GD++
Sbjct: 121 RECPHGGVIPTEAGEYEEESHEYLAEIKVGETVEVDRFIDNHELLTYLDDLELKLGDKIE 180
Query: 181 LLEYDAFAGAYTIEK--DGEQLQVTSAVASQIYIE 213
+LE+ F G +++ DG +L + A I+++
Sbjct: 181 VLEHLPFEGPIKVKRLADGAELSIGYKAAHYIFVK 215
>gi|148544718|ref|YP_001272088.1| iron dependent repressor [Lactobacillus reuteri F275]
gi|148531752|gb|ABQ83751.1| iron dependent repressor [Lactobacillus reuteri F275]
Length = 224
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTP KEDYLKII+EL +K+SNK+I+ + ++A +V+EM+ KL E LV+ + AG
Sbjct: 1 MTPMKEDYLKIIFELGGSHKKVSNKEISLGLGIAAGSVTEMISKLADEGLVVHEPYAGIS 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+KGQ A+ L RKHRL E FL++ L+Y ++H EAE+LEH SD LD FL +P
Sbjct: 61 LTEKGQKYAAELVRKHRLWETFLVDKLHYNFADVHSEAEILEHQTSDRLATALDSFLQHP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGG IP + L + L+R DN +LL Y+E+ L+ +++
Sbjct: 121 DHCPHGGVIPSANGKFPDVTHRLLADADDGEKVELERFLDNHELLTYLEELGLRPQEQVT 180
Query: 181 LLEYDAFAGAYTIEKDG--EQLQVTSAVASQIYIE 213
++ ++ F G I+K+ +++ V+ + I+IE
Sbjct: 181 VIRHEPFEGPIVIQKENNDQEINVSYKASHNIFIE 215
>gi|92090162|ref|ZP_01275059.1| Iron dependent repressor:FeoA [Lactobacillus reuteri 100-23]
gi|91803070|gb|EAS87972.1| Iron dependent repressor:FeoA [Lactobacillus reuteri 100-23]
Length = 224
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTP KEDYLKII+EL +K+SNK+I+ + ++A +V+EM+ KL E LV+ + AG
Sbjct: 1 MTPMKEDYLKIIFELGGSHKKVSNKEISLGLGIAAGSVTEMISKLADEGLVVHEPYAGIS 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+KGQ A+ L RKHRL E FL++ L+Y ++H EAE+LEH SD LD FL +P
Sbjct: 61 LTEKGQKYAAELVRKHRLWETFLVDKLHYNFADVHSEAEILEHQTSDRLATALDAFLQHP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGG IP + L + L+R DN +LL Y+E+ L+ +++
Sbjct: 121 DHCPHGGVIPSANGKFPDVTHRLLADADDGEKVELERFLDNHELLTYLEELGLRPQEQVT 180
Query: 181 LLEYDAFAGAYTIEKDG--EQLQVTSAVASQIYIE 213
++ ++ F G I+K+ +++ V+ + I+IE
Sbjct: 181 VIRHEPFEGPIVIQKENNDQEINVSYKASHNIFIE 215
>gi|94991883|ref|YP_599982.1| Iron-dependent repressor [Streptococcus pyogenes MGAS2096]
gi|94545391|gb|ABF35438.1| Iron-dependent repressor [Streptococcus pyogenes MGAS2096]
Length = 133
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 66/130 (50%), Positives = 92/130 (70%)
Query: 83 LMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIPQHGQPLVERYRT 142
+++ L Y E+H+EAEVLEHTVSD F++RLDK L++P CPHGGTIP++GQPLVE T
Sbjct: 1 MIHQLGYNTQEVHQEAEVLEHTVSDTFIDRLDKILDFPDFCPHGGTIPRYGQPLVEMNTT 60
Query: 143 TLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELRLLEYDAFAGAYTIEKDGEQLQV 202
TL +TE+G + L R+ D+F L++Y+E HHL I EL L + D FA YTI ++L +
Sbjct: 61 TLNTITELGRFRLSRIHDHFDLIQYLEAHHLSINTELTLTQIDTFAKTYTICYGDKELVI 120
Query: 203 TSAVASQIYI 212
+A Q+Y+
Sbjct: 121 PENIAKQLYV 130
>gi|116494321|ref|YP_806055.1| Mn-dependent transcriptional regulator [Lactobacillus casei ATCC
334]
gi|116104471|gb|ABJ69613.1| Mn-dependent transcriptional regulator [Lactobacillus casei ATCC
334]
Length = 214
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 118/213 (55%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK+I+E+ + +SNK+I M VSA +VSEM+ KL E LV G
Sbjct: 1 MTPNKEDYLKLIFEIGGDTQLVSNKRIVAGMHVSAASVSEMINKLGEEKLVAHTPYQGIQ 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ A+ L R HRL EVFL+ L Y AD +H+EAE LEH ++ +RL L P
Sbjct: 61 LTSAGRKKAAILVRNHRLWEVFLVQCLKYPADAVHQEAEKLEHALTPEMAKRLSAMLGEP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG IP +++ R TL + ++RV D L+ Y + L++ DE
Sbjct: 121 RYCPHGGVIPDANGHYLQQSRVTLGTLDVGQSGHIERVIDEVSLIDYTVKIDLRLDDEFT 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ A + + G++L V + A I++E
Sbjct: 181 VTAKTLDAVIIKLARTGKELAVDADRADHIFVE 213
>gi|81427994|ref|YP_394993.1| Putative metal(Iron)-dependent transcriptional regulator, DtxR
family [Lactobacillus sakei subsp. sakei 23K]
gi|78609635|emb|CAI54681.1| Putative metal(Iron)-dependent transcriptional regulator, DtxR
family [Lactobacillus sakei subsp. sakei 23K]
Length = 220
Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLKII+EL +K++NK+I ++VSA +V+EMV KL+ E+ V G
Sbjct: 1 MTPNKEDYLKIIFELGGDAKKVTNKEILAGLNVSAASVTEMVNKLVKENYVNHTPYQGIQ 60
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G A+ L R HRL EVFL++ L+Y + +H EAE LEH + ERL FL +P
Sbjct: 61 LTSEGAREAALLVRNHRLWEVFLVDKLHYQFNTVHPEAEQLEHVTNHDLAERLADFLGHP 120
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGG IP ++ L + +++RV D+ LLKY + L +GD +
Sbjct: 121 KRCPHGGIIPNAKGEFEQQSHHALVDLEVGEKAVIERVLDDNDLLKYTLEIGLTVGDTVT 180
Query: 181 LLEYDAFAGAYTIEKDGEQ--LQVTSAVASQIYI 212
L + F T+ + +Q +QV A I++
Sbjct: 181 LTKVGLFESPITVMDETQQTEIQVGIKAAQHIFV 214
>gi|73663394|ref|YP_302175.1| putative metalloregulator [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495909|dbj|BAE19230.1| putative metalloregulator [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 214
Score = 129 bits (325), Expect = 9e-29, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 1/213 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T KEDYLK I +SNK +++ +++ P+VSEMV +L V G
Sbjct: 2 LTEEKEDYLKAILTHDGDHSFVSNKTLSQYLTIKPPSVSEMVNRLEKSGYVETKPYKGVK 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L+K+G + ++HRL+E+FL+ L Y +E+H+EAEVLEH VS +FVERLDK L+YP
Sbjct: 62 LSKEGLTYTLDIIKRHRLLELFLIKILQYNWEEVHQEAEVLEHKVSHLFVERLDKLLDYP 121
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
CPHGG IP+ Q E Y T L +KRV+D LL Y+ + I + +
Sbjct: 122 ITCPHGGIIPRDNQ-YKELYTTNLLAFDTGDTVTIKRVRDRTDLLIYLSSKDILIDERIE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+L D ++KD + ++ A+ IY E
Sbjct: 181 ILSKDDTNKVIIVKKDEQITVLSYDNAAHIYAE 213
>gi|50954157|ref|YP_061445.1| iron-dependant repressor, DtxR metalloregulatory family [Leifsonia
xyli subsp. xyli str. CTCB07]
gi|50950639|gb|AAT88340.1| iron-dependant repressor, DtxR metalloregulatory family [Leifsonia
xyli subsp. xyli str. CTCB07]
Length = 222
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 6 EDYLKIIYELSERD-EKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ +E + + I+ KQ+AE+M V A VS+ +++L + L+ + G LT
Sbjct: 11 QDYLKVIWCATEWEGDPITVKQLAERMGVRAATVSDGIRRLADQGLLAHEPYGGIELTDA 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRLIE FL+ L Y DE+H+EAEVLEH VSD ++R+D+ L YP P
Sbjct: 71 GRHGAVAMVRRHRLIETFLVEELGYGWDEVHDEAEVLEHAVSDELIDRIDRRLGYPARDP 130
Query: 125 HGGTIPQ-HGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELRLLE 183
HG IP G P L T + + +++ + +L+Y+ + + + E+ + E
Sbjct: 131 HGDPIPTADGTPRRADAAPLLTAQTGVALTVVRISDADPAILRYLGERGIGLDAEVTVDE 190
Query: 184 YDAFAGAYTIEKDGEQLQVTSAVASQIYIEKK 215
+ FAG T+ GE + + S A +++ +
Sbjct: 191 HREFAGDVTVRLHGEPMVLGSTAAGAVWVATR 222
>gi|31793964|ref|NP_856457.1| PROBABLE TRANSCRIPTIONAL REPRESSOR SIRR [Mycobacterium bovis
AF2122/97]
gi|121638668|ref|YP_978892.1| putative transcriptional repressor sirR [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|31619558|emb|CAD94996.1| PROBABLE TRANSCRIPTIONAL REPRESSOR SIRR [Mycobacterium bovis
AF2122/97]
gi|121494316|emb|CAL72794.1| Probable transcriptional repressor sirR [Mycobacterium bovis BCG
str. Pasteur 1173P2]
Length = 228
Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 5/212 (2%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ E +K+S K +AE++ VSA SE ++KL + LV +K LT
Sbjct: 15 QDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVTLTDS 74
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRL+E FL+N L Y DE+H+EAEVLEH VSD + R+D L +P+ P
Sbjct: 75 GRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFPQRDP 134
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + L + + R+ D + Q+L+Y + + LR+L
Sbjct: 135 HGAPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRLRVLA 194
Query: 184 YDAFAGAYTI---EKDGEQLQVTSAVASQIYI 212
FAG ++ DG + + S A I++
Sbjct: 195 RREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
>gi|118617700|ref|YP_906032.1| transcriptional repressor SirR [Mycobacterium ulcerans Agy99]
gi|118569810|gb|ABL04561.1| transcriptional repressor SirR [Mycobacterium ulcerans Agy99]
Length = 230
Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+T +DYLK+I+ E E++S K +AEK+ VSA SE ++KL + LV +K
Sbjct: 10 LTTVAQDYLKVIWTAQEWSRERVSTKMLAEKIGVSASTASESIRKLAEQGLVDHEKYGAV 69
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ A ++ R+HRL+E FL+N L Y DE+H+EAEVLEH VSD V R+D L +
Sbjct: 70 TLTDSGRRAALAMVRRHRLLETFLVNELGYGWDEVHDEAEVLEHAVSDRLVTRIDAKLGF 129
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P+ PHG IP + L + + R+ D + ++L+Y + + + +
Sbjct: 130 PRRDPHGDPIPSSDGQVPTPPARQLWACRDGDTATVARISDADPEILRYFDSVGINLDSQ 189
Query: 179 LRLLEYDAFAGAYTI 193
LR+L FAG ++
Sbjct: 190 LRVLTRREFAGMISV 204
>gi|15609925|ref|NP_217304.1| PROBABLE TRANSCRIPTIONAL REPRESSOR SIRR [Mycobacterium tuberculosis
H37Rv]
gi|15842326|ref|NP_337363.1| iron repressor protein [Mycobacterium tuberculosis CDC1551]
gi|148662630|ref|YP_001284153.1| iron repressor protein [Mycobacterium tuberculosis H37Ra]
gi|148823976|ref|YP_001288730.1| transcriptional repressor sirR [Mycobacterium tuberculosis F11]
gi|2624310|emb|CAA15583.1| PROBABLE TRANSCRIPTIONAL REPRESSOR SIRR [Mycobacterium tuberculosis
H37Rv]
gi|13882622|gb|AAK47177.1| iron repressor protein [Mycobacterium tuberculosis CDC1551]
gi|134150952|gb|EBA42997.1| transcriptional repressor sirR [Mycobacterium tuberculosis str.
Haarlem]
gi|148506782|gb|ABQ74591.1| iron repressor protein [Mycobacterium tuberculosis H37Ra]
gi|148722503|gb|ABR07128.1| transcriptional repressor sirR [Mycobacterium tuberculosis F11]
Length = 228
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 5/212 (2%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ E +K+S K +AE++ VSA SE ++KL + LV +K LT
Sbjct: 15 QDYLKVIWTAQEWSQDKVSTKMLAERIGVSASTASESIRKLAEQGLVDHEKYGAVTLTDS 74
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRL+E FL+N L Y DE+H+EAEVLEH VSD + R+D L +P+ P
Sbjct: 75 GRRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRLMARIDAKLGFPQRDP 134
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + L + + R+ D + Q+L+Y + + LR+L
Sbjct: 135 HGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYFASIGISLDSRLRVLA 194
Query: 184 YDAFAGAYTI---EKDGEQLQVTSAVASQIYI 212
FAG ++ DG + + S A I++
Sbjct: 195 RREFAGMISVAIDSADGATVDLGSPAAQAIWV 226
>gi|70727261|ref|YP_254177.1| hypothetical protein SH2262 [Staphylococcus haemolyticus JCSC1435]
gi|68447987|dbj|BAE05571.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 215
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T KEDYLK I +SNK++++ +++ P+VSEMV +L V G
Sbjct: 2 LTEEKEDYLKAILANEGDTSFVSNKKLSQYLNIKPPSVSEMVGRLEKAGYVETKHYKGVK 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L+ +G + ++HRL+E+FL+ L Y +E+H+EAE+LEH +SD+FVERLDK L+YP
Sbjct: 62 LSDEGLKHTLDIIKRHRLLELFLIEVLQYNWEEVHQEAEILEHRISDLFVERLDKILDYP 121
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG IP++ Q E++ +L +KRV+D +LL Y+ ++ IG+++
Sbjct: 122 ETCPHGGIIPRN-QHFEEKFTVSLLEFEPGDKVTIKRVRDKTELLVYLSSKNISIGNDVE 180
Query: 181 LLEYD 185
++ D
Sbjct: 181 IVTKD 185
>gi|145294810|ref|YP_001137631.1| hypothetical protein cgR_0757 [Corynebacterium glutamicum R]
gi|140844730|dbj|BAF53729.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 223
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 6 EDYLKIIYELSE--RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
+DYLK I++++E D+ + IAEKM+ P SE +KKL LV +K AG LT+
Sbjct: 11 QDYLKTIWDITELLDDQPAALGDIAEKMNQKTPTASEAIKKLAARGLVNHEKYAGVTLTE 70
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
+G++LA + R+HRL+E FL + L YT DE+H +A++LEH SD +ER+D L P+
Sbjct: 71 QGKMLAIDMVRRHRLLETFLHDVLGYTWDEVHADADLLEHAASDQLIERIDAHLGRPRKD 130
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIG 176
PHG IP + E RTTL+ V + RV+D + +LL+Y+ Q+++ G
Sbjct: 131 PHGDPIPTAEGVIEESPRTTLEAVQPGETVTISRVKDIDPELLRYLAQYNVSPG 184
>gi|72162065|ref|YP_289722.1| iron dependent repressor [Thermobifida fusca YX]
gi|71915797|gb|AAZ55699.1| iron dependent repressor [Thermobifida fusca YX]
Length = 229
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 6 EDYLKIIYELSERDE-KISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDY+K+IY+L ER ++ ++AE+++VS +VS M++KL LV + LT
Sbjct: 13 EDYVKVIYDLQERGSGPVTISRVAERLAVSNSSVSGMLRKLGELGLVDHQRYGDVRLTPT 72
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G +A ++ R+HRLIE++L+ L Y+ DE+H+EAEVLEH VSD FVER+ + L +P V P
Sbjct: 73 GDKVALAVLRRHRLIELYLVEELGYSWDEVHDEAEVLEHVVSDRFVERIAERLGHPTVDP 132
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + + L V + RV D + LL+Y+ H+ IG + L+E
Sbjct: 133 HGDPIPTSDGRVPTQETRLLAHVDPGSGGTIVRVNDSDPALLRYLASQHIGIGMRIELVE 192
Query: 184 YDAFAGAYTI----EKDGEQLQVTSAVASQIYI 212
F G + ++ E+ + + VA ++I
Sbjct: 193 RQPFGGPLVVRLHTDEGVEERSIGTGVAEALWI 225
>gi|19551873|ref|NP_599875.1| Mn-dependent transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
gi|62389532|ref|YP_224934.1| IRON REPRESSOR PROTEIN [Corynebacterium glutamicum ATCC 13032]
gi|21323406|dbj|BAB98034.1| Mn-dependent transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
gi|41324866|emb|CAF19348.1| IRON REPRESSOR PROTEIN [Corynebacterium glutamicum ATCC 13032]
Length = 223
Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 6 EDYLKIIYELSE--RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
+DYLK I++++E D+ + IAEKM+ P SE +KKL LV +K AG LT+
Sbjct: 11 QDYLKTIWDITELLDDQPAALGDIAEKMNQKTPTASEAIKKLAARGLVNHEKYAGVTLTE 70
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
+G+ LA + R+HRL+E FL + L YT DE+H +A++LEH SD +ER+D L P+
Sbjct: 71 QGKTLAIDMVRRHRLLETFLHDVLGYTWDEVHADADLLEHAASDQLIERIDAHLGRPRKD 130
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIG 176
PHG IP + E RTTL+ V + RV+D + +LL+Y+ Q+++ G
Sbjct: 131 PHGDPIPTAEGVIEESPRTTLEAVQPGETVTISRVKDIDPELLRYLAQYNVSPG 184
>gi|87310429|ref|ZP_01092559.1| iron repressor protein [Blastopirellula marina DSM 3645]
gi|87286928|gb|EAQ78832.1| iron repressor protein [Blastopirellula marina DSM 3645]
Length = 220
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 78/210 (37%), Positives = 116/210 (55%), Gaps = 3/210 (1%)
Query: 6 EDYLKIIYELSERDEK--ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
E+Y+K IY++ R +K S ++A +SVS V+ M+K L L K G LT+
Sbjct: 7 ENYVKAIYQVCARADKDAASTGELATALSVSPGTVTSMLKTLSEAGLAEYMKYEGVSLTQ 66
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
G+ LA + R+HRLIE+FL+ L+ T DE+HEEAE +EH VSD+ V+R+D++L YP
Sbjct: 67 AGRTLALRVLRRHRLIELFLVRTLDLTWDEVHEEAEHMEHAVSDLLVDRIDEYLGYPDTD 126
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQ-LLKYMEQHHLKIGDELRLL 182
PHG IP+ +V L + L RV D L+Y+ + L G E +++
Sbjct: 127 PHGDPIPRADGTMVSVDSKKLTKWDAAEPFRLIRVMDQTSDFLRYLTEESLAPGCEGKII 186
Query: 183 EYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+ A AG TIE DG Q + A ++ +
Sbjct: 187 AFRAEAGVLTIEVDGRQTTLGLDAADKLLV 216
>gi|146298695|ref|YP_001193286.1| iron dependent repressor [Flavobacterium johnsoniae UW101]
gi|146153113|gb|ABQ03967.1| iron dependent repressor [Flavobacterium johnsoniae UW101]
Length = 217
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 127/215 (59%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDE-KISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
MT ++E+YLK IY L+ E ++S IAE M A +V++M+KKL +DLV K G
Sbjct: 1 MTFSEENYLKSIYHLTASLETEVSTNAIAEMMETKASSVTDMLKKLAEKDLVNYKKYQGV 60
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT+ G++ A + RKHRL EVFL+ LN++ DE+H+ AE LEH S+ + RLD FL
Sbjct: 61 SLTENGKLAAKMIVRKHRLWEVFLVEKLNFSWDEVHDIAEQLEHIKSEQLINRLDDFLGN 120
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P PHG IP +++ + L + + V+D + + LKY+++ + +G +
Sbjct: 121 PTEDPHGDPIPDANGRIIKIEKQLLSELEVNQTGVCVGVKDTSSEFLKYLDKQEIALGSK 180
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ L ++F + I+ DG +L +++ +AS ++++
Sbjct: 181 IEFLSKESFDLSVKIKVDGRELSISNKIASNLFVK 215
>gi|88711384|ref|ZP_01105472.1| iron dependent repressor [Flavobacteriales bacterium HTCC2170]
gi|88710325|gb|EAR02557.1| iron dependent repressor [Flavobacteriales bacterium HTCC2170]
Length = 218
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 128/216 (59%), Gaps = 4/216 (1%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
MT ++EDY+K IY L + + + +S IA+KM +VS+M++KL + LV K G
Sbjct: 1 MTLSEEDYIKAIYHLGKIKADSVSTNAIAKKMETKPSSVSDMLQKLSDKGLVNYKKYKGV 60
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT+ G + A +L RKHRL EVFL+ L +T DE+HE AE LEH S+ ++ LD+ L +
Sbjct: 61 TLTEAGVVTALNLVRKHRLWEVFLVEKLGFTWDEVHEVAEQLEHIKSEKLIDGLDQLLKF 120
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLK--GVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGD 177
PK PHG IP L+ + + L + E G + R + + L Y+++H++ +G
Sbjct: 121 PKYDPHGDPIPTKEGELIIQKKKLLSNLAIGESGTCIGVR-DSSAKFLNYLDKHNIALGK 179
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ +++ + F G+ I + +++ +++ +AS +Y++
Sbjct: 180 NISVVDREEFDGSVAILLESKEINISNQIASNLYVK 215
>gi|91214982|ref|ZP_01251954.1| putative transcriptional regulator [Psychroflexus torquis ATCC
700755]
gi|91186587|gb|EAS72958.1| putative transcriptional regulator [Psychroflexus torquis ATCC
700755]
Length = 217
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 4 NKEDYLKIIYELSERDEK-ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLT 62
++E+YLK I L + + ++ +AE+M A +V++MVKKL ++LV+ K G L+
Sbjct: 5 SEENYLKAILHLQKTSKSGVNTNALAEEMQTKASSVTDMVKKLSEKNLVIYKKYQGVYLS 64
Query: 63 KKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKV 122
G+ A + RKHRL EVFL++ L+++ DE+HE AE LEH SD + LDKFL YPK
Sbjct: 65 DSGRKTALQIVRKHRLWEVFLVDKLSFSWDEVHEVAEQLEHIKSDKLITELDKFLKYPKR 124
Query: 123 CPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRL 181
PHG IP + L +++ L V+D + + LKY++++++ +G +++
Sbjct: 125 DPHGDPIPDAKGDFHVANKILLSSLSKGEHGTLVGVKDTSSEFLKYLDKNNIALGKTIQV 184
Query: 182 LEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
L+ + F + I+ DG+ L+V+ VA IYI++
Sbjct: 185 LDKEEFDESMLIQTDGKSLRVSPMVAVNIYIKQ 217
>gi|89889866|ref|ZP_01201377.1| putative Mn- or Fe-dependent transcriptional regulator
[Flavobacteria bacterium BBFL7]
gi|89518139|gb|EAS20795.1| putative Mn- or Fe-dependent transcriptional regulator
[Flavobacteria bacterium BBFL7]
Length = 218
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 1/212 (0%)
Query: 4 NKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
++E+Y+K IY L E +S IA +MS A +V++M+KKL ++L G LT+
Sbjct: 5 SEENYIKTIYHLQEGKNLVSTNDIAGRMSTKASSVTDMLKKLAEKNLAEYIPYKGTRLTQ 64
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
G A+ + RKHRL EVFL+ LN++ DE+HE AE LEH S ++ +D+ L +PK
Sbjct: 65 NGINCATQIIRKHRLWEVFLVEKLNFSWDEVHEVAEQLEHIQSRKLIDEMDQLLGFPKYD 124
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLL 182
PHG IP + +T + + + +L V D + + LKY+++H +++G + L+
Sbjct: 125 PHGDPIPDAQGNYEKITKTAVSQLEKGQKGILTGVLDTSTRFLKYLDKHQIELGTPIELI 184
Query: 183 EYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
E ++F G I+ D +++ ++ A +Y++K
Sbjct: 185 EKESFDGTCHIKTDQKEIHISKTTADNLYLKK 216
>gi|150024191|ref|YP_001295017.1| Probable metal-dependent transcriptional regulator [Flavobacterium
psychrophilum JIP02/86]
gi|149770732|emb|CAL42196.1| Probable metal-dependent transcriptional regulator [Flavobacterium
psychrophilum JIP02/86]
Length = 217
Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 126/215 (58%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
MT ++E+YLK IY L+ D ++S IAEKM A +V++M+KKL +DL+ K G
Sbjct: 1 MTFSEENYLKTIYHLTTISDSEVSTNAIAEKMETKASSVTDMLKKLSEKDLINYKKYQGV 60
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT+ G + A + RKHRL EVFL+ L++ DE+H+ AE LEH S+ + +LD FL
Sbjct: 61 SLTETGSLSAKMIVRKHRLWEVFLVEKLDFPWDEVHDIAEQLEHIKSEKLINKLDDFLGN 120
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P PHG IP ++ + L + E + + V+D + + LKY+++ + +G +
Sbjct: 121 PTEDPHGDPIPNANGQIISIEKQLLSELNEKQIGICVGVKDTSSEFLKYLDKQEIALGSK 180
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ ++ + F + I+ D +L +++ +AS ++++
Sbjct: 181 IEIIVKEEFDLSLKIKVDARELTISNKIASNLFVK 215
>gi|15923624|ref|NP_371158.1| iron dependent repressor [Staphylococcus aureus subsp. aureus Mu50]
gi|15926311|ref|NP_373844.1| hypothetical protein SA0590 [Staphylococcus aureus subsp. aureus
N315]
gi|21282325|ref|NP_645413.1| hypothetical protein MW0596 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482862|ref|YP_040086.1| putative metalloregulator [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485506|ref|YP_042727.1| putative metalloregulator [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651475|ref|YP_185573.1| iron-dependent repressor [Staphylococcus aureus subsp. aureus COL]
gi|87161674|ref|YP_493324.1| iron-dependent repressor [Staphylococcus aureus subsp. aureus
USA300]
gi|88194405|ref|YP_499198.1| hypothetical protein SAOUHSC_00638 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267093|ref|YP_001246036.1| iron dependent repressor [Staphylococcus aureus subsp. aureus JH9]
gi|150393141|ref|YP_001315816.1| iron dependent repressor [Staphylococcus aureus subsp. aureus JH1]
gi|151220816|ref|YP_001331638.1| iron dependent repressor [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156978962|ref|YP_001441221.1| hypothetical protein SAHV_0631 [Staphylococcus aureus subsp. aureus
Mu3]
gi|17980924|gb|AAL50775.1|AF452622_1 manganese-dependent transcriptional repressor [Staphylococcus
aureus]
gi|13700525|dbj|BAB41822.1| SA0590 [Staphylococcus aureus subsp. aureus N315]
gi|14246403|dbj|BAB56796.1| iron dependent repressor [Staphylococcus aureus subsp. aureus Mu50]
gi|21203762|dbj|BAB94461.1| MW0596 [Staphylococcus aureus subsp. aureus MW2]
gi|27466717|gb|AAO12516.1| SirR [Staphylococcus aureus]
gi|49240991|emb|CAG39661.1| putative metalloregulator [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49243949|emb|CAG42375.1| putative metalloregulator [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285661|gb|AAW37755.1| iron-dependent repressor [Staphylococcus aureus subsp. aureus COL]
gi|87127648|gb|ABD22162.1| iron-dependent repressor [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201963|gb|ABD29773.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740162|gb|ABQ48460.1| iron dependent repressor [Staphylococcus aureus subsp. aureus JH9]
gi|149945593|gb|ABR51529.1| iron dependent repressor [Staphylococcus aureus subsp. aureus JH1]
gi|150373616|dbj|BAF66876.1| iron dependent repressor [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721097|dbj|BAF77514.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 214
Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T KEDYLK I + ++NK +++ +++ P+VSEMV +L V G
Sbjct: 2 LTEEKEDYLKAILTNNGDKNFVTNKILSQFLNIKPPSVSEMVGRLEKAGYVETKPYKGVR 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+ G + ++HRL+E+FL+ L Y +E+H+EAE+LEH +SD+FVERLD LN+P
Sbjct: 62 LTEDGLTHTLDIIKRHRLLELFLIEILKYNWEEVHQEAEILEHRISDLFVERLDSLLNFP 121
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG IP++ + E+Y TT+ + +KRV+D LL Y+ + IG+E+
Sbjct: 122 ETCPHGGVIPRNNE-YKEKYITTILNYEPGDIVTIKRVRDKTDLLIYLSSKDISIGNEVE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
++ D I+++ + V+ A ++ EK
Sbjct: 181 IVSKDEMNKVIIIKRNDNVIIVSYENAMNMFAEK 214
>gi|120403338|ref|YP_953167.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1]
gi|119956156|gb|ABM13161.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1]
Length = 248
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ E EK+S K +AE++ VSA SE ++KL + LV +K LT+
Sbjct: 18 QDYLKVIWTAQEWSREKVSTKLLAERIGVSASTASESIRKLADQGLVDHEKYGAVTLTEA 77
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRL+E FL+N L Y+ DE+H+EAEVLEH VSD ++R+D L YP P
Sbjct: 78 GRRAALAMVRRHRLMETFLVNELGYSWDEVHDEAEVLEHAVSDRMLDRIDAKLGYPTRDP 137
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + L + + R+ D + ++L+Y + + + LR++
Sbjct: 138 HGDPIPAADGRVPTPPARQLSDCQDGEAGTVARISDADPEMLRYFDAVGINLDSRLRVVA 197
Query: 184 YDAFAGAYTI 193
FAG ++
Sbjct: 198 RRDFAGMISV 207
>gi|25027207|ref|NP_737261.1| putative regulatory protein [Corynebacterium efficiens YS-314]
gi|23492488|dbj|BAC17461.1| putative regulatory protein [Corynebacterium efficiens YS-314]
Length = 248
Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 5/191 (2%)
Query: 3 PNK-EDYLKIIYELSERD--EKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
P+K +DYLK I+++++R+ + + +IAE + P SE +K+L DLV ++ +G
Sbjct: 32 PDKTQDYLKTIWDITDRNGGQPATLGEIAEILEQKTPTASEAIKRLATRDLVHHERYSGV 91
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ LA + R+HRL+E FL + L YT DE+HE+A++LEH SD + R+D L +
Sbjct: 92 TLTATGRALALEMVRRHRLLETFLHDVLGYTWDEVHEDADLLEHAASDRLIARIDAHLGH 151
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P+ PHG IP + + TTL + RVQD + +LL+Y+ +H + G
Sbjct: 152 PRRDPHGDPIPTAEGLIDDLGHTTLATAVPGTTVTITRVQDIDPELLRYLAEHDVVPGSR 211
Query: 179 LRLLEYDAFAG 189
+ ++ + FAG
Sbjct: 212 I-IIAREPFAG 221
>gi|108799064|ref|YP_639261.1| iron (metal) dependent repressor, DtxR family [Mycobacterium sp.
MCS]
gi|119868179|ref|YP_938131.1| iron dependent repressor [Mycobacterium sp. KMS]
gi|126434667|ref|YP_001070358.1| iron dependent repressor [Mycobacterium sp. JLS]
gi|108769483|gb|ABG08205.1| iron (metal) dependent repressor, DtxR family [Mycobacterium sp.
MCS]
gi|119694268|gb|ABL91341.1| iron dependent repressor [Mycobacterium sp. KMS]
gi|126234467|gb|ABN97867.1| iron dependent repressor [Mycobacterium sp. JLS]
Length = 240
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+T +DYLK I+ E EK+S K +AE++ VSA SE ++KL + LV +K
Sbjct: 12 LTTVAQDYLKTIWTAQEWSHEKVSTKLLAERIGVSASTASESIRKLADQGLVNHEKYGAV 71
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ A + R+HRL+E FL+N L Y+ DE+H+EAEVLEH VSD+ + R+D L +
Sbjct: 72 TLTDAGRHAALQMVRRHRLMETFLVNELGYSWDEVHDEAEVLEHAVSDLMLTRIDAKLGH 131
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P PHG IP + L + + R+ D + ++L+Y + + +
Sbjct: 132 PTRDPHGDPIPAADGRVPTPPARQLSECEDGDAGTVARISDADPEMLRYFDSVGISLDSR 191
Query: 179 LRLLEYDAFAGAYTIEKDGEQ 199
LR+L FAG T+ D +
Sbjct: 192 LRVLARRDFAGLITVAVDSPE 212
>gi|82750337|ref|YP_416078.1| iron dependent repressor [Staphylococcus aureus RF122]
gi|82655868|emb|CAI80272.1| iron dependent repressor [Staphylococcus aureus RF122]
Length = 214
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T KEDYLK I + ++NK +++ +++ P+VSEMV +L V G
Sbjct: 2 LTEEKEDYLKAILTNNGDKNFVTNKILSQFLNIKPPSVSEMVGRLEKAGYVEIKPYKGVR 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+ G + ++HRL+E+FL+ L Y +E+H+EAE+LEH +SD+FVERLD LN+P
Sbjct: 62 LTEDGLTHTLDIIKRHRLLELFLIEILKYNWEEVHQEAEILEHRISDLFVERLDSLLNFP 121
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
+ CPHGG IP++ + E+Y TT+ + +KRV+D LL Y+ + IG+E+
Sbjct: 122 ETCPHGGVIPRNNE-YKEKYITTILNYEPGDIVTIKRVRDKTDLLIYLSSKDISIGNEVE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
++ D I+++ + V+ A ++ EK
Sbjct: 181 IVSKDEMNKVIIIKRNDNVIIVSYENAMNMFAEK 214
>gi|134102468|ref|YP_001108129.1| iron (metal) dependent repressor, DtxR family [Saccharopolyspora
erythraea NRRL 2338]
gi|133915091|emb|CAM05204.1| iron (metal) dependent repressor, DtxR family [Saccharopolyspora
erythraea NRRL 2338]
Length = 224
Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY++ IY LSER ++N + +++ +S +VS M+ KL LV + LT +G
Sbjct: 10 EDYVRAIYGLSERGVPVTNATLTQRLGLSPSSVSGMINKLSQLGLVTHVRYRSVELTPQG 69
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA + R+HRLIE+FL+ L+YT DE+H EA+ LEH VSD VE + L +P PH
Sbjct: 70 RRLAYDVLRRHRLIELFLVEELDYTWDEVHREADALEHAVSDELVEHIAAKLGHPTHDPH 129
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMG-VYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
G IP +VE+ T L E G V + RV D + +LL+Y+ HH+ +G + ++E
Sbjct: 130 GDPIPT-ADGVVEKPATKLLDQVEPGTVGTVARVWDTDSELLRYLTDHHITLGTRIEIVE 188
Query: 184 YDAFAGAYTI 193
F G +
Sbjct: 189 RKPFGGPLVV 198
>gi|88802031|ref|ZP_01117559.1| Iron dependent repressor [Polaribacter irgensii 23-P]
gi|88782689|gb|EAR13866.1| Iron dependent repressor [Polaribacter irgensii 23-P]
Length = 217
Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 125/215 (58%), Gaps = 2/215 (0%)
Query: 2 TPNKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
T ++E+YLK IY L S+ + IS IA+ + A +V++MVKKL + +VL K G
Sbjct: 3 TLSEENYLKAIYHLESDSKKGISTNAIAKSLETKASSVTDMVKKLSEKKVVLYKKYQGVT 62
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ A+++ RKHRL EVFL+ LN++ DE+HE AE LEH S + +LD L +P
Sbjct: 63 LTAFGKKTAANIVRKHRLWEVFLVERLNFSWDEVHEVAEQLEHIKSPKLINQLDALLGFP 122
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDEL 179
PHG IP + + L + + + V D + + L+++++ + +G ++
Sbjct: 123 THDPHGDPIPDKDGNVNTLDKILLSTLNKNESGVCVGVNDSSSEFLRFLDKKKITLGKKI 182
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+LE + F + IE DGE+L ++ +AS +YI+K
Sbjct: 183 IVLEKEDFDDSLFIEIDGEKLSISKKIASNLYIKK 217
>gi|145224606|ref|YP_001135284.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK]
gi|145217092|gb|ABP46496.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK]
Length = 242
Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ E EK+S K +A+++ VSA SE ++KL + LV +K LT
Sbjct: 18 QDYLKVIWTAQEWSHEKVSTKLLADRIGVSASTASESIRKLADQGLVDHEKYGAVTLTDA 77
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRL+E FL+N L Y DE+H+EAE+LEH VSD ++R+D L YP P
Sbjct: 78 GRRAALAMVRRHRLMETFLVNELGYGWDEVHDEAEILEHAVSDRMLDRIDAKLGYPTRDP 137
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + L + + R+ D + ++L+Y + + + LR++
Sbjct: 138 HGDPIPAADGKVPTPPARQLSACQDGEAGTVARISDADPEMLRYFDTVGISLDSRLRVVA 197
Query: 184 YDAFAGAYTI 193
FAG ++
Sbjct: 198 RRDFAGMISV 207
>gi|118465260|ref|YP_882856.1| iron repressor protein [Mycobacterium avium 104]
gi|118166547|gb|ABK67444.1| iron repressor protein [Mycobacterium avium 104]
Length = 234
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 119/225 (52%), Gaps = 15/225 (6%)
Query: 1 MTPNKEDYLKIIYELSE-----RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDK 55
+T +DYLK I+ E +K+S K +AEK+ VSA SE ++KL + LV +K
Sbjct: 10 LTAVGQDYLKAIWNAQEWSPEGAPQKVSTKMLAEKIGVSASTASESIRKLAEQGLVDHEK 69
Query: 56 QAGYLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDK 115
LT+ G+ A + R+HRL+E FL+N L Y DE+H+EAEVLEH VSD V R+D
Sbjct: 70 YGAVTLTEAGRRAALEMVRRHRLLETFLVNELGYAWDEVHDEAEVLEHAVSDRLVARIDA 129
Query: 116 FLNYPKVCPHGGTIP-QHGQ-PLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHH 172
L +P+ PHG IP GQ P + G + G + R+ D + ++L+Y
Sbjct: 130 KLGFPQRDPHGDPIPATDGQVPTPPARQLWACGDGDTGT--VARISDADSEMLRYFTDVG 187
Query: 173 LKIGDELRLLEYDAFAGAYTI---EKDGEQLQVT--SAVASQIYI 212
+ + LR+L FAG ++ DG + V S A I++
Sbjct: 188 INLDSRLRVLTRREFAGMISVAIESGDGAETTVDLGSPAARAIWV 232
>gi|152964950|ref|YP_001360734.1| iron dependent repressor [Kineococcus radiotolerans SRS30216]
gi|151359467|gb|ABS02470.1| iron dependent repressor [Kineococcus radiotolerans SRS30216]
Length = 251
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
ED LK +Y E D KI+ +A+ M VSA SE V+KL L+ ++ G LT++
Sbjct: 38 EDCLKTVYAAGEWSDAKITLSMLAQTMGVSASTASEAVRKLTDAGLLRHERYGGVELTEE 97
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRL+E FL+ L Y+ DE+HEEAEVLEH VSD ++RLD L +P+ P
Sbjct: 98 GRTRALAVVRRHRLLETFLVADLGYSWDEVHEEAEVLEHVVSDRMLDRLDARLGHPERDP 157
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP+ + L V E G ++ R+ D + +L+Y + + + + +L+
Sbjct: 158 HGDPIPRPDGTVPRPGAHNLSDVPEGGTGVVARISDADPDVLRYFAELGIGLDLTVEVLQ 217
Query: 184 YDAFAGAYTIE-KDGEQLQVTSAVASQIYI 212
FAG + G ++ + + I++
Sbjct: 218 RRGFAGTTVVRLGTGREVDLGDPAVAAIWV 247
>gi|116671204|ref|YP_832137.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
gi|116611313|gb|ABK04037.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
Length = 237
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 2/190 (1%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDY+K+IY +E +D+ I++ Q+A ++ V+ +VSEMV+KL + LV + LT
Sbjct: 11 EDYVKVIYSFTEWQDKPITSSQLALRLGVANSSVSEMVRKLKDQGLVDHKPYSAITLTAD 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G LA S+ R+HRLIE +L+ L Y+ DE+H+EAE+LEH VSD F+ER+ L P P
Sbjct: 71 GVRLALSMVRRHRLIETYLVQELGYSWDEVHDEAELLEHAVSDTFIERMAGKLGNPLRDP 130
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQ-DNFQLLKYMEQHHLKIGDELRLLE 183
HG IP + + + + E + R+ DN +LL+Y+ + + ++ +L
Sbjct: 131 HGDPIPAADGTVHMPHAHRMSELDEGHTGRITRISDDNPELLRYLSAQEIDLDADIEVLG 190
Query: 184 YDAFAGAYTI 193
F GA +
Sbjct: 191 RKPFGGALVV 200
>gi|119963034|ref|YP_948365.1| putative Iron dependent repressor [Arthrobacter aurescens TC1]
gi|119949893|gb|ABM08804.1| putative Iron dependent repressor [Arthrobacter aurescens TC1]
Length = 237
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 6/214 (2%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDY+K+IY +E +D+ I++ Q+A+++ V+ +VSEMV+KL + LV + LT +
Sbjct: 11 EDYVKVIYSYTEWQDKPITSSQLAQRLGVANSSVSEMVRKLKDQGLVDHQPYSAIRLTPQ 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G LA S+ R+HRLIE +L+ L Y+ DE+H+EAE+LEH VSD F+ER+ L +P P
Sbjct: 71 GMRLALSMVRRHRLIETYLVEELGYSWDEVHDEAEMLEHAVSDTFIERMSAKLGHPVRDP 130
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + + + + + + R+ D N LL+Y+ + + + ++
Sbjct: 131 HGDPIPSADGSVELPHAYRMIELDQGHSGRITRISDENPDLLRYLASEEISLDAPVEVVG 190
Query: 184 YDAFAGAYTIE----KDGEQLQVTSAVASQIYIE 213
F GA + G + + V S ++++
Sbjct: 191 RKPFGGALVVRIGSGAKGREFDLADEVTSALWVQ 224
>gi|88804291|ref|ZP_01119811.1| iron dependent repressor [Robiginitalea biformata HTCC2501]
gi|88785170|gb|EAR16339.1| iron dependent repressor [Robiginitalea biformata HTCC2501]
Length = 220
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDE-KISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
MT ++E+YLK IY L + ++ IA +M +V++MVK+L + LV K G
Sbjct: 1 MTHSEENYLKGIYHLCKGGSVAVATNAIAAQMDTKPSSVTDMVKRLSEKGLVDYRKYQGV 60
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT+ G A + RKHRL E+FL+ L++ D++HE AE LEH S+V ++RLD L Y
Sbjct: 61 SLTESGNRQALKIIRKHRLWELFLVEKLDFKWDQVHEIAEQLEHIESEVLIDRLDALLEY 120
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P PHG IP R + L + V+D + L+++++H + +G +
Sbjct: 121 PDYDPHGDPIPDKNGVFKTREKKLLSAMPVPSEGQFVGVKDSSATFLRFLDRHRIALGKK 180
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ +LE + F + I DGE +++ +AS +YI+
Sbjct: 181 VSILEKEEFDKSMRIRLDGEAFRISHQIASNLYIK 215
>gi|124009310|ref|ZP_01693989.1| iron dependent repressor [Microscilla marina ATCC 23134]
gi|123985087|gb|EAY25031.1| iron dependent repressor [Microscilla marina ATCC 23134]
Length = 224
Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Query: 1 MTPNKEDYLKIIYELSE---RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQA 57
++ +EDYLK IY+LSE E IS +IA+K+++SA +VS+M+KKL +++V K
Sbjct: 2 LSLTEEDYLKAIYQLSETHGEKEGISTNEIAKKINISAASVSDMIKKLSQKEMVNHMKYK 61
Query: 58 GYLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFL 117
G LTK+G+ +A +L RKHRL E FL+ L+++ DE+H+ AE LEH S ++RLD+FL
Sbjct: 62 GVTLTKQGRQIAINLVRKHRLWETFLVRKLHFSWDEVHDVAEQLEHIQSPTLIQRLDEFL 121
Query: 118 NYPKVCPHGGTIPQHGQPLVERYRTTLK-GVTEMGVYLLKRVQDNFQLLKYMEQHHLKIG 176
+P PHG IP +V+R + +L+ + +L + + LK++ + + IG
Sbjct: 122 EFPAYDPHGDPIPNDKGEIVKRKKISLQEAPLHQPLKVLAVEEGDPLFLKHLNKLKINIG 181
Query: 177 DELRLLEYDAFAGAYTIEKDGEQ--LQVTSAVASQIYI 212
+ +L+ + + I D + + ++ VA I++
Sbjct: 182 TAITILDKVEYDESLEIRLDKAEAPMMISHKVAQYIFV 219
>gi|149277982|ref|ZP_01884121.1| Mn-dependent transcriptional regulator [Pedobacter sp. BAL39]
gi|149231180|gb|EDM36560.1| Mn-dependent transcriptional regulator [Pedobacter sp. BAL39]
Length = 217
Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 128/214 (59%), Gaps = 10/214 (4%)
Query: 5 KEDYLKIIYELSERDEK-ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
+E+YLKIIY LSE + + + IAEKM A +V++M+KKL ++L+ K G LT+
Sbjct: 6 EENYLKIIYHLSENNHQPVQTNAIAEKMQTRAASVTDMIKKLADKELIDYKKYQGVKLTE 65
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
KG++ A ++ R+HRL EVFL+ LN+ DE+H+ AE LEH S +ERLD+FL +PK
Sbjct: 66 KGKLAAINIVRRHRLWEVFLVEKLNFKWDEVHDIAEELEHIRSAELIERLDEFLAFPKND 125
Query: 124 PHGGTIP-QHGQ----PLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDE 178
PHG IP + G P V+ + L+ + G+ ++ + + LK++E+ + +G +
Sbjct: 126 PHGDPIPDKQGHFDQVPFVKLSKLKLR---DHGL-IMGVSEHSSAFLKHLEKLGMTLGKD 181
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
++++ F G+ + + + + VT VA I I
Sbjct: 182 VKVITITEFDGSIELLVEEKHISVTREVAKHILI 215
>gi|27467326|ref|NP_763963.1| iron dependent repressor [Staphylococcus epidermidis ATCC 12228]
gi|57866185|ref|YP_187889.1| iron-dependent repressor [Staphylococcus epidermidis RP62A]
gi|27314869|gb|AAO04005.1|AE016745_104 iron dependent repressor [Staphylococcus epidermidis ATCC 12228]
gi|1617434|emb|CAA67572.1| putative iron dependant repressor [Staphylococcus epidermidis]
gi|57636843|gb|AAW53631.1| iron-dependent repressor [Staphylococcus epidermidis RP62A]
Length = 214
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 123/214 (57%), Gaps = 1/214 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T KEDYLK I +SNK++++ +++ P+VSEMV +L E V G
Sbjct: 2 LTEEKEDYLKAILTNDGDVSFVSNKKLSQFLNIKPPSVSEMVGRLEKEGYVETKHYKGAR 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT++G + ++HRL+E+FL+ L Y +E+H+EAE+LEH +SD+FVERLDK LN+P
Sbjct: 62 LTEEGLKQTLDIIKRHRLLELFLIEILQYNWEEVHQEAEILEHRISDLFVERLDKILNFP 121
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
K CPHGG IP+ G E + T++ ++RV+D +LL Y+ + IG+ +
Sbjct: 122 KTCPHGGVIPR-GDQYKEIFTTSILNFEPGERVTVRRVRDKTELLVYLSSKDIYIGNTVE 180
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
++ D ++++ ++ A I+ EK
Sbjct: 181 IVSKDDTNKVIILKRNDIVTILSYENAMNIFAEK 214
>gi|108803498|ref|YP_643435.1| iron (metal) dependent repressor, DtxR family [Rubrobacter
xylanophilus DSM 9941]
gi|108764741|gb|ABG03623.1| iron (metal) dependent repressor, DtxR family [Rubrobacter
xylanophilus DSM 9941]
Length = 227
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 21/225 (9%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ + EDYLK I+ + R+ S K+I+E +SV+ +V+ M+ +L V ++ G
Sbjct: 12 LSVSTEDYLKAIWAVG-REGSASTKEISEHLSVAPASVTNMLGRLQEMGFVRYERYRGAS 70
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+KG A L RKHRLIE FL+ HL Y+ E+HEEAE LEH VSD+F ERL ++L +P
Sbjct: 71 LTEKGYREALRLVRKHRLIETFLLEHLGYSWQEVHEEAERLEHAVSDLFTERLAEYLGHP 130
Query: 121 KVCPHGGTIP--------QHGQPLVERYRTTLKGVTEMG--VYLLKRVQDNFQLLKYMEQ 170
PHG IP Q +PL E T G V + + Q + ++L+Y +
Sbjct: 131 GRDPHGDPIPAPDGTMERQEARPLAE---------TAAGERVRISRVDQSSPEVLEYFGE 181
Query: 171 HHLKIGDELRLLEYDAFAGAYTIE-KDGEQLQVTSAVASQIYIEK 214
L G LR+ E G +E ++G + + +A +++E+
Sbjct: 182 RGLVPGRRLRVTETRKLDGVIAVEDEEGNAHTLGAPLARSVFVER 226
>gi|118473748|ref|YP_886989.1| iron repressor protein [Mycobacterium smegmatis str. MC2 155]
gi|118175035|gb|ABK75931.1| iron repressor protein [Mycobacterium smegmatis str. MC2 155]
Length = 236
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ E EK+S K +AE++ VSA SE ++KL + LV +K LT
Sbjct: 15 QDYLKVIWTAQEWSREKVSTKLLAERIGVSASTASESIRKLADQGLVHHEKYGAVTLTDA 74
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A ++ R+HRL+E FL+ L Y DE+H+EAE+LEH VSD ++R+D L +P P
Sbjct: 75 GRRAALAMVRRHRLMETFLVQELGYGWDEVHDEAEILEHAVSDRMLDRIDAKLGHPTRDP 134
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IP + L + + R+ D + ++L+Y + + + LR++
Sbjct: 135 HGDPIPAADGQVPTPPARQLSVCQDGDAGTVARISDADPEMLRYFDSVGISLDSRLRVVA 194
Query: 184 YDAFAGAYTI 193
FAG ++
Sbjct: 195 RRDFAGTISV 204
>gi|86135190|ref|ZP_01053772.1| putative transcriptional regulator [Tenacibaculum sp. MED152]
gi|85822053|gb|EAQ43200.1| putative transcriptional regulator [Polaribacter dokdonensis
MED152]
Length = 218
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 128/215 (59%), Gaps = 8/215 (3%)
Query: 5 KEDYLKIIYELSERDEK--ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLT 62
+E+YLK IY L E D K IS IA+ ++ A +VS+M+KKL +++VL K G LT
Sbjct: 6 EENYLKAIYHL-ESDSKVGISTNAIAKSLATKASSVSDMIKKLSDKEVVLYKKYKGVTLT 64
Query: 63 KKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKV 122
K G+ A+++ RKHRL EVFL+ LN++ DE+H+ AE LEH S + +LD L +P
Sbjct: 65 KLGKKTAANIVRKHRLWEVFLVEKLNFSWDEVHDVAEQLEHIKSQKLINQLDALLGFPTH 124
Query: 123 CPHGGTIPQHGQPL--VERYRTTLKGVTEMGVYLLKRVQDNFQ-LLKYMEQHHLKIGDEL 179
PHG IP + +++ + V E GV + V D+ L+++++ + +G ++
Sbjct: 125 DPHGDPIPDEDGVINSIDKSLLSTLNVNETGVCV--GVNDSSSDFLQFLDKKGITLGKKI 182
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
++ E + F + +I ++L +++ +A+ +YI+K
Sbjct: 183 KVTEKEDFDDSLSILIGDKKLSISNKIANNLYIKK 217
>gi|126662849|ref|ZP_01733848.1| Mn-dependent transcriptional regulator [Flavobacteria bacterium
BAL38]
gi|126626228|gb|EAZ96917.1| Mn-dependent transcriptional regulator [Flavobacteria bacterium
BAL38]
Length = 215
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 70/215 (32%), Positives = 123/215 (57%), Gaps = 2/215 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEK-ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
MT ++E+Y+K+IY LS K ++ IA + A +V++M+KKL ++LV K G
Sbjct: 1 MTISEENYIKVIYHLSLVSPKGVNTNAIAGMLDTKASSVTDMLKKLADKNLVTYQKYQGV 60
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT+ G A + RKHRL EVFL+ L ++ DE+HE AE LEH S+ + RLD FL +
Sbjct: 61 TLTENGFYAAKMIVRKHRLWEVFLVEKLKFSWDEVHEIAEELEHIKSEKLINRLDDFLGF 120
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P PHG IP + + + L Y V+D + + L+Y+++ + +G
Sbjct: 121 PSFDPHGDPIPDENGIIKKMDKHLLSEAESNVEYHCVGVKDSSAEFLQYLDKQKIALGSV 180
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
++++E + + +I DG+++ +++ +A+ +Y++
Sbjct: 181 IKIIEKEEYDKTLSILIDGKKIMLSNKIATNLYVQ 215
>gi|54026022|ref|YP_120264.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54017530|dbj|BAD58900.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length = 255
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+T +DYLK+I+ E EK+S K +AE++ VSA VSE V+KL + LV +
Sbjct: 38 LTSVAQDYLKVIWTAQEWSQEKVSTKLLAERIGVSASTVSEAVRKLADQGLVEHARYGSI 97
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ A ++ R+HRLIE FL+N L Y DE+H+EAEVLEH VS++ + R+D L Y
Sbjct: 98 ALTDHGRRAAVAMVRRHRLIETFLVNELGYGWDEVHDEAEVLEHAVSELLMARIDAKLGY 157
Query: 120 PKVCPHGGTIP 130
P PHG IP
Sbjct: 158 PDRDPHGDPIP 168
>gi|156740126|ref|YP_001430255.1| iron (metal) dependent repressor, DtxR family [Roseiflexus
castenholzii DSM 13941]
gi|156231454|gb|ABU56237.1| iron (metal) dependent repressor, DtxR family [Roseiflexus
castenholzii DSM 13941]
Length = 237
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 122/214 (57%), Gaps = 7/214 (3%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T +YL++IY L+ R E + + ++AE M V+ P V++MV ++ +++D + LL
Sbjct: 21 TEKMREYLEVIYYLAARGEPVISARLAEWMHVTPPTVADMVSRMEDRGYIVRDGRGEILL 80
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T +G LA ++ R+HR++E FL++ + EIHEEA LEH +S ER+++ +
Sbjct: 81 TDEGFRLAEAMVRRHRILERFLVDVMGMQWHEIHEEAVRLEHALSPRLEERIEELVGEAT 140
Query: 122 VCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRV----QDNFQLLKYMEQHHLKIGD 177
CPHG IP G+ V L T GV+ L+R+ +++ L++Y++ HL G+
Sbjct: 141 TCPHGNPIP--GRCDVYAGTVRLDQATPGGVFTLRRIAEEAEEDTVLIRYLQNSHLVPGE 198
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIY 211
+ +++ G T+++D Q+ ++ +A+ ++
Sbjct: 199 QFAVIDVSPVYGV-TLQRDDRQITLSPQIAAYLW 231
>gi|15789756|ref|NP_279580.1| SirR [Halobacterium sp. NRC-1]
gi|10580136|gb|AAG19060.1| transcription repressor [Halobacterium sp. NRC-1]
Length = 233
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 6 EDYLKIIYELS-ERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDYLK IY L E + I+ IAE + V+ P V+ M +KL L+ ++K AG LT
Sbjct: 15 EDYLKSIYNLEREHEPPIATSTIAEYLDVTPPTVTSMAEKLESRGLIEREKYAGVELTPD 74
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ +A + R HRL+E FL HL+Y DE+H+EA+ LEH +S+ F +RL + L P V P
Sbjct: 75 GETVAVEVIRHHRLLESFLATHLDYDWDEVHDEADALEHHISEEFEDRLAEKLGDPTVDP 134
Query: 125 HGGTIPQHG-QPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLL 182
HG IP +P L E ++ R D N L+Y+ ++ G EL +
Sbjct: 135 HGDPIPNADLEPPEHPDTEVLADHAEGDALVVARASDRNTDELRYLADAGVQPGTELTVT 194
Query: 183 EYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKA 216
E+ A G + +E DGE + + VA + + A
Sbjct: 195 EH-APIGLFVVEIDGEAVHLPERVAETLEVRPAA 227
>gi|111023611|ref|YP_706583.1| probable Fe(2+)-dependent transcriptional regulator [Rhodococcus
sp. RHA1]
gi|110823141|gb|ABG98425.1| probable Fe(2+)-dependent transcriptional regulator [Rhodococcus
sp. RHA1]
Length = 243
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+I+ + E E++S K ++EK+ VSA VSE ++KL + LV + LT+
Sbjct: 32 QDYLKVIWTVQEWSQERVSTKLLSEKIGVSASTVSEAIRKLSDQGLVDHARYGSIALTEA 91
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G++ A + R+HRLIE +L++ L Y DE+H+EAEVLEH VSD+ + R+D L +P+ P
Sbjct: 92 GRVAAVGMVRRHRLIETYLVHELGYGWDEVHDEAEVLEHAVSDLMISRMDAKLGHPERDP 151
Query: 125 HGGTIP 130
HG IP
Sbjct: 152 HGDPIP 157
>gi|86131327|ref|ZP_01049926.1| Iron dependent repressor [Cellulophaga sp. MED134]
gi|85818738|gb|EAQ39898.1| Iron dependent repressor [Dokdonia donghaensis MED134]
Length = 217
Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats.
Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 2/213 (0%)
Query: 2 TPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+ ++E+YLK IY L +S IA +M +V++MVKKL + LV K G
Sbjct: 3 SKSEENYLKAIYHLEAIAKHGVSTNAIAGEMETKPSSVTDMVKKLADKGLVNYVKYKGTT 62
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+KG+ A + RKHR+ EVFL+ L++ DE+H+ AE LEH S + RLDKFL+YP
Sbjct: 63 LTEKGRKAALGVVRKHRIWEVFLLETLDFQWDEVHDIAEQLEHIKSQELINRLDKFLDYP 122
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNF-QLLKYMEQHHLKIGDEL 179
PHG IP + + L + + L V++ L+++++ + IG ++
Sbjct: 123 DYDPHGDPIPDKNGNIKSAEKKLLAELKKGNQGQLVGVRETSPDFLQFLDKRSIAIGSKI 182
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
++L + F G+ I+ GEQ ++ +A +YI
Sbjct: 183 KVLGKEFFDGSMVIQVQGEQFFISKKIAENLYI 215
>gi|120437529|ref|YP_863215.1| iron dependent repressor [Gramella forsetii KT0803]
gi|117579679|emb|CAL68148.1| iron dependent repressor [Gramella forsetii KT0803]
Length = 218
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 4 NKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLT 62
++E+YLK I+ L + +S +AE+M A +V++M+K+L + LV K G L+
Sbjct: 5 SEENYLKAIFHLETAYKNGVSTNALAEEMQTKASSVTDMIKRLSDKALVNYKKYQGVKLS 64
Query: 63 KKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKV 122
+G+ A + RKHRL EVFL+ L + DE+HE AE LEH S+ LDKFL YPK
Sbjct: 65 SEGKQAAIEVIRKHRLWEVFLVEKLGFNWDEVHEVAEQLEHIKSEKLTNELDKFLEYPKK 124
Query: 123 CPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRL 181
PHG IP R L + + + V+D + L+Y++++ + +G ++++
Sbjct: 125 DPHGDPIPDAKGNFSVGDRILLSALKKGETGICVGVKDSSADFLQYLDKNKISLGKKIQI 184
Query: 182 LEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
LE + F + I+ DG +L +++ +++ ++I+
Sbjct: 185 LEKEDFDQSMLIKMDGNELMISNQISTNLFIK 216
>gi|83855826|ref|ZP_00949355.1| putative transcriptional regulator [Croceibacter atlanticus
HTCC2559]
gi|83849626|gb|EAP87494.1| putative transcriptional regulator [Croceibacter atlanticus
HTCC2559]
Length = 229
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 1 MTPNKEDYLKIIYEL--SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAG 58
+T ++EDYLK I++L +EK+ N ++A+ +++S +V+ MVKKL L+ L+ ++ A
Sbjct: 10 LTKSEEDYLKAIFQLMLDSDNEKVGNNKLADYLNISPASVNNMVKKLKLKKLLKSERYAK 69
Query: 59 YLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
LT G+ +A L RKHRL E FL +LN+T DE+H+ AE LEH S + LD+F++
Sbjct: 70 LQLTDSGRDIAVGLIRKHRLWETFLSKYLNFTWDEVHDVAEQLEHVKSPKLINELDRFMD 129
Query: 119 YPKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGD 177
+PK PHG IP + TL + + L V D + + L+Y+ + L +
Sbjct: 130 FPKKDPHGEVIPDAEGNYRTFEKVTLASLDSGTICKLISVNDGSVEFLRYVSEIGLALSS 189
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
E++++E +F + IE + V+ A +++E
Sbjct: 190 EIKVIEKRSFDNSVKIEFNDSIETVSQKFADNVFVE 225
>gi|119952751|ref|YP_950214.1| putative Iron dependent repressor [Arthrobacter aurescens TC1]
gi|119951881|gb|ABM10790.1| putative Iron dependent repressor [Arthrobacter aurescens TC1]
Length = 236
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK+++ L E DE ++ +AE++ VS SE ++K + L+ + G LT
Sbjct: 20 QDYLKLVWLLREWSDEPVTVGLVAERLGVSPSTASEGIRKYATQGLLTHARYGGVELTPT 79
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G A + R+HRL+E FL+ L Y DE+H EAEVLEH VSD F+ R+D+ L +P+ P
Sbjct: 80 GLDYALVMVRRHRLLETFLVQKLGYRWDEVHHEAEVLEHAVSDTFIARIDELLGHPQHDP 139
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLE 183
HG IPQ G+ L ++RV D + +LL+Y + L ++ + E
Sbjct: 140 HGDPIPQPGEHPDRPDAVPLVDAQPGQAVSIRRVSDESAELLRYFAEQGLVPDAQIIIQE 199
Query: 184 YDAFAGAYTIE--KDGEQLQVTSAVASQIYIE 213
F + G+ + + A+ ++IE
Sbjct: 200 RKTFTAGTPVRLIGTGKDISLGDEAAAALWIE 231
>gi|148658625|ref|YP_001278830.1| iron dependent repressor [Roseiflexus sp. RS-1]
gi|148570735|gb|ABQ92880.1| iron dependent repressor [Roseiflexus sp. RS-1]
Length = 236
Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T +YL++IY L+ R E + + ++AE M V+ P V++MV ++ +++D + L
Sbjct: 20 TEKMREYLEVIYYLAARGEPVISARLAEWMHVTPPTVADMVSRMEDRGYIMRDGRGEISL 79
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T +G LA ++ R+HR++E FL++ + EIHEEA LEH +S ER+++ +
Sbjct: 80 TDEGFRLAEAMVRRHRILERFLVDVMGLQWHEIHEEAVRLEHALSPRLEERIEELVGDAA 139
Query: 122 VCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQ----LLKYMEQHHLKIGD 177
CPHG IP R L V GV+ L+R+ + + L++Y++ HL G+
Sbjct: 140 TCPHGNPIPGRCASYTGSVR--LDQVAPGGVFTLRRISEEAEEDTVLIRYLQNSHLVPGE 197
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIY 211
+++ G T+++D Q+ ++ +A+ ++
Sbjct: 198 RFAIIDCSPVYGV-TLQRDDRQITLSPQIAAYLW 230
>gi|149369473|ref|ZP_01889325.1| Mn-dependent transcriptional regulator [unidentified eubacterium
SCB49]
gi|149356900|gb|EDM45455.1| Mn-dependent transcriptional regulator [unidentified eubacterium
SCB49]
Length = 218
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 70/216 (32%), Positives = 124/216 (57%), Gaps = 6/216 (2%)
Query: 2 TPNKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
T +E+Y+K IY L S+ ++S IA+ M +V++MV+KL + ++ K G +
Sbjct: 3 TKAEENYIKTIYHLQSQITGEVSTNTIADAMETKPSSVTDMVQKLADKKILSYRKYKGAI 62
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT++G+ +A+ + RKHRL EVFL++ LN+ DE+HE AE LEH SD ++RLD FL P
Sbjct: 63 LTEQGRKVAAGVIRKHRLWEVFLVDKLNFHWDEVHEIAEQLEHIQSDELIKRLDSFLGTP 122
Query: 121 KVCPHGGTIPQHGQPLV--ERYRTTLKGVTEMGVYL-LKRVQDNFQLLKYMEQHHLKIGD 177
PHG IP + E+ + + GV + +K F L+++++ ++ IG
Sbjct: 123 GFDPHGDPIPDENGNFMKTEKKLLSKLKKGQRGVCVGVKETSPEF--LQFLDKKNISIGT 180
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
++ +L + F G+ I+ +Q ++ +A ++++
Sbjct: 181 KIHVLGKEFFDGSMVIQVGKDQSFISKKIAENLFMQ 216
>gi|110637770|ref|YP_677977.1| transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
gi|110280451|gb|ABG58637.1| transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
Length = 235
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Query: 1 MTPNKEDYLKIIYE--LSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAG 58
++ +E+YLK + + L E +E ++A +SV V++M+KKL ++LV +K
Sbjct: 2 LSYTEENYLKALLKITLQEENEGAGTNELAALLSVKPATVTDMLKKLKDKNLVSYEKYGK 61
Query: 59 YLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
LT KG+ + + RKHRL E FL L +T DEIHE AE LEH S +E+LDKFL
Sbjct: 62 IFLTSKGKKYGTDILRKHRLWETFLFQKLEFTWDEIHEVAEQLEHIQSAKLIEKLDKFLG 121
Query: 119 YPKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDN-FQLLKYMEQHHLKIGD 177
+P + PHG IP + ++ TL + + V+DN L+Y+ + L +
Sbjct: 122 HPTLDPHGDVIPTSSGEIKIQFTNTLSEIDVDTTCRMVAVKDNSSSFLQYVVKIGLALNT 181
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
E+++L + IE G++ V+ A I++
Sbjct: 182 EIKVLAKQEYDSLMEIEIKGKRCSVSQKFAENIFV 216
>gi|113938714|ref|ZP_01424579.1| iron dependent repressor [Herpetosiphon aurantiacus ATCC 23779]
gi|113899610|gb|EAU18607.1| iron dependent repressor [Herpetosiphon aurantiacus ATCC 23779]
Length = 223
Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 122/218 (55%), Gaps = 7/218 (3%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQA--G 58
+T +DY+K IY L + + +SN ++A SAP ++EM+KKL E L L D QA G
Sbjct: 3 ITAGVQDYVKAIYTLQQEEAPVSNGRLASYFGFSAPTITEMLKKL--ESLELVDYQARYG 60
Query: 59 YLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
LT+ G+ +A + R HRL+E++L+ L + DE+H+EAEVLEH +S+ ER+ ++L
Sbjct: 61 VRLTEIGEKIALEMIRHHRLLELYLVQALGMSWDEVHDEAEVLEHVLSEALEERIAEYLG 120
Query: 119 YPKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGD 177
+P+ PHG IP + +R +L + + + V+D + L+Y+ L +
Sbjct: 121 HPQFDPHGSPIPARDGSIPQRDSCSLALLELNQIARIVEVEDRDAARLRYLADLGLTPNN 180
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQ--VTSAVASQIYIE 213
+ ++ F G T+ EQ Q + S +A++I ++
Sbjct: 181 VITIIARAPFDGPLTLWVGAEQTQQVLDSRLATRIQVQ 218
>gi|76802081|ref|YP_327089.1| transcription regulator [Natronomonas pharaonis DSM 2160]
gi|76557946|emb|CAI49530.1| transcription regulator [Natronomonas pharaonis DSM 2160]
Length = 219
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 3/197 (1%)
Query: 6 EDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDY+K IY L ++ DE++ ++A+ M V++P VS M+KKL LV +++ G LT++
Sbjct: 7 EDYIKAIYALQNDTDERVGTSELADYMDVTSPTVSSMIKKLEERGLVDREEYRGVRLTEE 66
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+++A + R HRL+E FL HL+Y ++HEEA+ LEH VS+ ER+ + L+ P V P
Sbjct: 67 GEVVALEILRHHRLLEAFLTEHLDYDWADVHEEADRLEHHVSEELTERIAEALDNPGVDP 126
Query: 125 HGGTIPQHGQPLVERYRTT-LKGVTEMGVYLLKRVQ-DNFQLLKYMEQHHLKIGDELRLL 182
HG IP L E TT L E +++R++ + L+Y+ ++ E+ ++
Sbjct: 127 HGDPIPDADLELPEAGETTRLTAAAEGDTVVVRRIRHQGDEELRYLAAAGIEPDVEIEVV 186
Query: 183 EYDAFAGAYTIEKDGEQ 199
E F +GEQ
Sbjct: 187 EIAPFGLVTVQTPEGEQ 203
>gi|78485249|ref|YP_391174.1| Iron dependent repressor [Thiomicrospira crunogena XCL-2]
gi|78363535|gb|ABB41500.1| iron (metal) dependent repressor, DtxR family [Thiomicrospira
crunogena XCL-2]
Length = 218
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 6 EDYLKIIYELSERDEK---ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLT 62
EDYLKIIY+L E +E +S IAE++++S +VS M+KKL + ++ + G LT
Sbjct: 7 EDYLKIIYKLEEENESDKGVSTSAIAERLAISQASVSNMLKKLADKKMIQYEPYYGVSLT 66
Query: 63 KKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKV 122
KG+ +A ++ R+HR++E+FL+ L Y DE+ EEAE+LEH VSD R+ + L P
Sbjct: 67 AKGRKVALNMIRRHRILELFLVERLGYQWDEVDEEAEILEHAVSDKLANRMWEELGQPTQ 126
Query: 123 CPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNF-QLLKYMEQHHLKIGDELRL 181
PHG IP +V+ +L + + R+Q+ + L+Y+ L + +
Sbjct: 127 DPHGSPIPNEKGEMVQPKMASLAEIEAPAKAKVVRIQNRSPEELRYLFSIGLVKDAGVII 186
Query: 182 LEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+ F G +IE +GEQ + +A I++
Sbjct: 187 HQKAPFEGPLSIEINGEQHALDYRLAQSIFV 217
>gi|88855886|ref|ZP_01130548.1| putative transcriptional regulator [marine actinobacterium
PHSC20C1]
gi|88814753|gb|EAR24613.1| putative transcriptional regulator [marine actinobacterium
PHSC20C1]
Length = 233
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 4/216 (1%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ + ++YLK ++ LSE D ++ IAEK + +VS+ V++L + + K
Sbjct: 6 LSVSTQNYLKAVWGLSEWSDAPVTATVIAEKTGFTLSSVSDAVRRLTDQGFLNHAKYGSI 65
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ A ++ R+HRLIE FL++ L Y D++H+EAE LEH VSD VER+D+FL +
Sbjct: 66 ALTNIGRAHAVAMVRRHRLIESFLVSVLGYGWDQVHDEAENLEHAVSDFMVERIDEFLEH 125
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
P PHG IP + L VT + +++R+ D + +LLK+ E+ +
Sbjct: 126 PTRDPHGDPIPSADGTVTIPDAVQLSRVTPDSIVVVERISDEDPELLKFFEERGIVFSAT 185
Query: 179 LRLLEYDAFAGAYTIEKDG--EQLQVTSAVASQIYI 212
L + ++ A + G E + + + +Y+
Sbjct: 186 LTVSAGAPYSDALNVRVSGSAEVISLGRSATDALYV 221
>gi|86141000|ref|ZP_01059559.1| probable transcriptional repressor SirR [Flavobacterium sp. MED217]
gi|85832942|gb|EAQ51391.1| probable transcriptional repressor SirR [Leeuwenhoekiella
blandensis MED217]
Length = 216
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEK-ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
MT ++E+YLK IY L + K +S +++ + + +EM+KKL + LV G
Sbjct: 1 MTFSEENYLKSIYTLQKEHPKGVSTNVLSKYLDTKPASATEMIKKLDEKGLVHYQPYQGV 60
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
+L G + A + RKHRL E FL N L+++ DEIH+ AE LEH SD + LDKFL Y
Sbjct: 61 ILKDSGAVSALKVIRKHRLWETFLANKLDFSWDEIHDVAEQLEHIKSDKLIRELDKFLGY 120
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
PK PHG IP + + + + + V D + L++++Q ++++G
Sbjct: 121 PKHDPHGDPIPDEAGNIAKLEKKRVSQLQPGDTGTCIGVNDTSSSFLQFLDQQNIRLGSV 180
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
L ++ F + T+ D +L ++ IY+
Sbjct: 181 LEIVNIQEFDKSMTVRIDDRELLLSQIATEHIYV 214
>gi|126645463|ref|ZP_01718007.1| putative transcriptional regulator [Algoriphagus sp. PR1]
gi|126578874|gb|EAZ83038.1| putative transcriptional regulator [Algoriphagus sp. PR1]
Length = 222
Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 1 MTPNKEDYLKIIYELSERDEK-ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+T +E+YLK IY LS+ K +S IA ++ +VS+M++KL + ++ K G
Sbjct: 5 LTIAEENYLKAIYHLSDGGTKSVSTNDIAAEIKTKPASVSDMLRKLGDKAVIEYRKYYGV 64
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
+T++G+ +A RKHRL EVFL++ L + DE+HE AE LEH S + ++RLD +LNY
Sbjct: 65 NITEEGKKIALGTIRKHRLWEVFLVDKLQFAWDEVHEVAEELEHIQSPLLIQRLDAYLNY 124
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDE 178
PK PHG IP + R R L + + V+D + L+Y+++ IG
Sbjct: 125 PKFDPHGDPIPDEFGDVKARPRVALNEMEIGQSGQIVAVKDSSAAFLQYLDKVGAYIGAR 184
Query: 179 LRLLEYDAFAGAYTIEKDGEQ-LQVTSAVASQIYIEK 214
+++++ F G+ I D ++ L ++ VA+ I I++
Sbjct: 185 IKVMDKVEFDGSLEILVDQKKNLFMSKDVAANILIQQ 221
>gi|94991884|ref|YP_599983.1| Iron-dependent repressor [Streptococcus pyogenes MGAS2096]
gi|94545392|gb|ABF35439.1| Iron-dependent repressor [Streptococcus pyogenes MGAS2096]
Length = 82
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
MTPNKEDYLK IYE+ E++ KI+NK +AEKM VSAPAVSEM+KK++ + ++KDK GYL
Sbjct: 1 MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGWIVKDKAKGYL 60
Query: 61 LTKKGQILASSLYRKHRLIEVF 82
L KG L ++LYRKHRLIEVF
Sbjct: 61 LKDKGYALVANLYRKHRLIEVF 82
>gi|148273712|ref|YP_001223273.1| hypothetical protein CMM_2528 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831642|emb|CAN02610.1| sirR [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 224
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 3/215 (1%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ +DYLK+I+ +E D+ ++ ++A+++ + S+ +++L + LV
Sbjct: 6 LSSAAQDYLKLIWSATEWTDQPMTVSRLADRLGIRPATASDGIRRLTAQGLVEHRPYGSI 65
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ A + R+HRL+E FL+ L Y DE+H+EAEVLEH VSD FV R+D+ L +
Sbjct: 66 ELTDDGRRHAIQMVRRHRLLETFLVEVLGYGWDEVHDEAEVLEHAVSDDFVARIDQHLGH 125
Query: 120 PKVCPHGGTIPQ-HGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDE 178
P PHG IP G+P + + + + + ++ +LL+ + +H + +
Sbjct: 126 PSRDPHGDPIPSADGEPHLPDATVLADAAADRPMRVRRISDEDPRLLRELAEHGIGLDAT 185
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQ-VTSAVASQIYI 212
L GA + DG + +T A AS +++
Sbjct: 186 LVREAASGSPGAVRVTVDGSAARPLTPAAASAVWV 220
>gi|110638423|ref|YP_678632.1| Mn-dependent transcriptional regulator [Cytophaga hutchinsonii ATCC
33406]
gi|110281104|gb|ABG59290.1| Mn-dependent transcriptional regulator [Cytophaga hutchinsonii ATCC
33406]
Length = 218
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 70/215 (32%), Positives = 117/215 (54%), Gaps = 3/215 (1%)
Query: 1 MTPNKEDYLKIIYELSERDEK-ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+T +E+Y+K IY LS D + +S IAE + +V++M++KL + + K G
Sbjct: 2 LTHTEENYIKTIYHLSGEDNRDVSTNGIAEVLKTKPASVTDMLRKLSEKSFINYIKYQGV 61
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LTKKG+ A + RKHRL EVFL++ L + DE+H+ AE LEH S V + RLD+FL
Sbjct: 62 TLTKKGKKEALQIIRKHRLWEVFLVDKLKFHWDEVHDIAEQLEHIQSSVLISRLDEFLGN 121
Query: 120 PKVCPHGGTIP-QHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDE 178
P PHG IP Q G+ V R ++ ++ + L+Y+++ ++ G +
Sbjct: 122 PAFDPHGDPIPDQQGEITVRRKYLLCDMSVGFKGIVVGMLETSPAFLQYLDRLNICPGAK 181
Query: 179 LRLLEYDAFAGAYTIE-KDGEQLQVTSAVASQIYI 212
+ + + F G+ I ++ + L ++ VA +Y+
Sbjct: 182 ITIKDRIVFDGSLEIVLQESKHLVISYEVAKNLYV 216
>gi|21674552|ref|NP_662617.1| iron-dependent repressor [Chlorobium tepidum TLS]
gi|21647748|gb|AAM72959.1| iron-dependent repressor [Chlorobium tepidum TLS]
Length = 271
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ + E YL++I+ L+ER+ ++S IA+ + S VSE + +L L+ + + G
Sbjct: 31 LSESSEMYLQVIWRLTEREREVSVSDIAKAIGHSLSTVSEKIVRLTEAGLLRHEWREGVS 90
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
+T KG+ A RK RL+E FL Y E+HEEA LEH +SD + LD+ L YP
Sbjct: 91 MTPKGRQAACRTLRKRRLVETFLFKMAGYGIHELHEEACRLEHVISDRLSDALDRLLGYP 150
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDEL 179
PHG IP H L L V E + +++ + ++L+Y+ Q L G
Sbjct: 151 MHDPHGHPIPAHDGALRSELLEPLSTVDEGRTVRIAQLRSADPEVLEYIAQLGLLPGRSC 210
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKK 215
+++ F G TI E++ + +AS I ++ +
Sbjct: 211 TVMQKAPFQGPLTIADGSERIAIAFEIASIIDVQAE 246
>gi|83816669|ref|YP_446151.1| iron dependent repressor, putative [Salinibacter ruber DSM 13855]
gi|83758063|gb|ABC46176.1| iron dependent repressor, putative [Salinibacter ruber DSM 13855]
Length = 217
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
Query: 2 TPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+P+ EDYLK +Y+L + + +S +AE M VS+ + S M+K+L + + + G
Sbjct: 3 SPSIEDYLKALYKLEDDKGAPVSTGALAEAMDVSSASASNMIKRLDELEFLTYEAYEGAT 62
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ +A + R HRL+E++L + ++ DEIHEEAE+LEH +S+ F +R+++ L +P
Sbjct: 63 LTDPGRTVALEVLRHHRLLELYLKEVMGFSWDEIHEEAEILEHHISERFEDRIEEMLGHP 122
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDEL 179
+ PHG IP + +L + E + V D + +LL +EQ L G +
Sbjct: 123 ERDPHGHPIPARDGSVDALPTRSLADLPEGDAASIDHVADEDGELLDLLEQRGLLPGATV 182
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ + G + DG + + VA ++ +E
Sbjct: 183 EVADTRPLDGLLVVAVDGTEQLIGRPVAKKVVVE 216
>gi|153895131|ref|ZP_02015714.1| iron dependent repressor [Halorubrum lacusprofundi ATCC 49239]
gi|151586354|gb|EDN49778.1| iron dependent repressor [Halorubrum lacusprofundi ATCC 49239]
Length = 219
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 6 EDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDYLK IY L SE+ +S IAE + ++P+V++M+ KL LV ++ G LT +
Sbjct: 7 EDYLKAIYVLQSEQGPPVSTSAIAEYLDKTSPSVTDMLGKLEDRGLVEREPYRGTELTAE 66
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ +A + R HRL+E FL L+Y E+HEEA+ LEH +S+ F R+ + L+ P V P
Sbjct: 67 GEAVALEIVRHHRLLEAFLAERLDYDWSEVHEEADALEHHISEAFERRVAETLDDPAVDP 126
Query: 125 HGGTIPQHG-QPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLL 182
HG IP +P+ E L E ++ RV D N L+Y+ + G E+ ++
Sbjct: 127 HGDPIPGADLEPVDEESGALLANHKEGDRVVVTRVSDRNEDELEYLADAGITPGTEIEVV 186
Query: 183 EYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
+ F GEQ + + +A I +E
Sbjct: 187 DVAPFGMVTVTTPTGEQ-SLPAEIARSIRVE 216
>gi|55377375|ref|YP_135225.1| transcription repressor [Haloarcula marismortui ATCC 43049]
gi|55230100|gb|AAV45519.1| transcription repressor [Haloarcula marismortui ATCC 43049]
Length = 230
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 1 MTPNKEDYLKIIYELS-ERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ EDYLK IY L + D I+ IAE + V+AP V+ MV+KL LV ++K G
Sbjct: 2 LSAKMEDYLKAIYRLERDGDPPIAPSTIAEMLDVTAPTVTSMVEKLADRGLVEREKYKGV 61
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
T +G+ +A + R HRL+E FL L Y E+HEEAEVLEH +S+ F R+ L+
Sbjct: 62 QTTPEGETVALEIIRHHRLLETFLTEQLGYDWAEVHEEAEVLEHHISEEFERRVAAVLDE 121
Query: 120 PKVCPHGGTIPQHG-QPLVERYRTTLKGVTEMGVYLLKRVQD 160
P+ PHG IP P+ + T L E G + RV+D
Sbjct: 122 PEFDPHGDPIPSDSLDPIDDESATALSEHGEGGRLEVARVRD 163
>gi|88803088|ref|ZP_01118614.1| putative metal-dependent transcriptional regulator [Polaribacter
irgensii 23-P]
gi|88780654|gb|EAR11833.1| putative metal-dependent transcriptional regulator [Polaribacter
irgensii 23-P]
Length = 237
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 2/215 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T KE+YLK IY LS +S ++++KM+VS P + MVKK+ +L +K L
Sbjct: 22 TQAKENYLKAIYLLSRESIDVSITELSKKMNVSKPTSNNMVKKMEERGWLLYEKYKPIKL 81
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T KG+ L + + RKHRL E+FL + + +E+H+ AE +EH S +F +R+DK L +P
Sbjct: 82 TSKGEKLGALIVRKHRLTEMFLSKVMGFGWEEVHDIAEEVEHISSIIFFDRMDKILGFPT 141
Query: 122 VCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQ-LLKYMEQHHLKIGDELR 180
+ PHG IP +++ L + E L+ ++++ + LL Y+ + +K+G L
Sbjct: 142 LDPHGSPIPDREGEVLKVNYLKLGSIKEGQKVKLRGLENSSKDLLLYLNKKRIKLGTVLL 201
Query: 181 LLEYDAFAGAYTI-EKDGEQLQVTSAVASQIYIEK 214
+ + F ++ + +D + +T V + +E+
Sbjct: 202 IRHIETFDNSFEVLLEDNATIVLTFDVCQSLLVEE 236
>gi|42526731|ref|NP_971829.1| iron-dependent transcriptional regulator [Treponema denticola ATCC
35405]
gi|41817046|gb|AAS11740.1| iron-dependent transcriptional regulator [Treponema denticola ATCC
35405]
Length = 222
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 6 EDYLKIIYE-LSERD-EKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
E+YLK I + LSE D EKI+ ++A+ + V+ + M KKL E + + G LT+
Sbjct: 9 ENYLKAIVKFLSESDKEKITTGELAKLLHVTPGTATSMAKKLEKEKYIEYQNRIGCRLTE 68
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
KG+ ++ R+HRLIE FL L IH EAE LEH SD+ ++++DK+L +PK
Sbjct: 69 KGKKYGLNILRRHRLIETFLFQTLKMDGKNIHNEAENLEHAASDLLIDKIDKYLGHPKRD 128
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELRLLE 183
PHG IP+ Q ++L V Y + R+ +Y + +LK+ ++ L
Sbjct: 129 PHGAMIPRKNQKEYTCTDSSLDKVKCGIEYSISRLTGTDAQFEYYKTINLKLNSKIILQN 188
Query: 184 YDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ +G I DG ++ ++ + I++EK
Sbjct: 189 KNEESGLAEIIIDGNKISCSTMILKNIFVEK 219
>gi|149370062|ref|ZP_01889913.1| Mn-dependent transcriptional regulator [unidentified eubacterium
SCB49]
gi|149356553|gb|EDM45109.1| Mn-dependent transcriptional regulator [unidentified eubacterium
SCB49]
Length = 218
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 119/216 (55%), Gaps = 10/216 (4%)
Query: 5 KEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+E+Y+K ++ L +++E IS + ++ VS P+ ++M+KKL E +V+ K +T+K
Sbjct: 6 RENYIKALFYLHQKNEDISLSDLGTELQVSKPSANDMIKKLQHEGIVISKKYKPIRITEK 65
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ A+ + RKHRL E+FLM + + +E+HE AE LEH +D F +R+D+ + +PK P
Sbjct: 66 GKQRAAEIIRKHRLSEMFLMQIMKFGWEEVHEIAEELEHIKTDQFFDRMDELMGFPKTDP 125
Query: 125 HGGTIPQH----GQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
HG IP +P +R G T + L + D L ++ ++++ E+
Sbjct: 126 HGSPIPDKNGNFNRPNYKRLSQMSVGATVIVKALRESATD---FLLFLNNKNIQLNTEIT 182
Query: 181 LLEYDAFAGAYTIEKDGEQLQVT--SAVASQIYIEK 214
+ + F ++T+ GE+ V A+ +I +++
Sbjct: 183 VTHIENFDHSFTVSY-GEKKDVVLGKAICDRILVDE 217
>gi|156743261|ref|YP_001433390.1| iron (metal) dependent repressor, DtxR family [Roseiflexus
castenholzii DSM 13941]
gi|156234589|gb|ABU59372.1| iron (metal) dependent repressor, DtxR family [Roseiflexus
castenholzii DSM 13941]
Length = 230
Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T + +DYLK I+++ +++ +AE++ S +V+ M+KKL +LV + G +L
Sbjct: 14 TESVQDYLKTIFDIQREHGRVATTALAERLGNSPASVTGMIKKLAALNLVEYEPYQGVVL 73
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T G+ +A + R HRLIE +L L D++H EAE EH +S+ +R+D L YP
Sbjct: 74 TPAGEKIALEVIRHHRLIERYLAEALGVPWDQVHAEAEKWEHVLSEDLEDRIDAVLGYPT 133
Query: 122 VCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELR 180
PHG IP+ L + T L + ++ V D + +L+Y + L+ G ++
Sbjct: 134 TDPHGAPIPKRDGTLPPPHTTRLSDLQTGQSAMVAEVSDHDPAMLRYFAELGLRPGVDVT 193
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
++ F G T+ D + V VA + +
Sbjct: 194 VVAVAPFGGPLTVRLDDVEHAVGREVAGYVVV 225
>gi|126645074|ref|ZP_01717618.1| iron dependent repressor [Algoriphagus sp. PR1]
gi|126578485|gb|EAZ82649.1| iron dependent repressor [Algoriphagus sp. PR1]
Length = 219
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
+ +E+YLK ++ L+ + +++ ++A +M VS P V+ MVK + V+ +K L
Sbjct: 3 SQTEENYLKALFNLANEENEVNISELAGQMQVSMPTVNSMVKNMQKNGWVIYEKYRPVTL 62
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
TK GQ A+ + RKHRL E+FL+N + + +E+HE AE +EH + F ER+D+ L +P
Sbjct: 63 TKDGQKAAALIIRKHRLTEMFLVNKMGFGWEEVHEIAEQVEHIHAGKFFERMDEMLGFPT 122
Query: 122 VCPHGGTIPQHGQPLVERYRTTLKGV-TEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
V PHG IP + E +L + V L + + L+++ L +G EL
Sbjct: 123 VDPHGSPIPDKNGRVQEVNYVSLSSCKSGQTVTLAGLTNSSTEFLEFLNSRELSLGKELS 182
Query: 181 LLEYDAF 187
+ + +
Sbjct: 183 IRSVEPY 189
>gi|154509235|ref|ZP_02044877.1| hypothetical protein ACTODO_01757 [Actinomyces odontolyticus ATCC
17982]
gi|153798869|gb|EDN81289.1| hypothetical protein ACTODO_01757 [Actinomyces odontolyticus ATCC
17982]
Length = 222
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 6 EDYLKIIYELSE--RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
ED LK+++ E RD + K ++E M V +E +++L + LV ++ LT
Sbjct: 13 EDILKLVWSAEEAGRD-GVKPKDVSEHMGVVPSTATENIQRLARQGLVTHERYGRVRLTP 71
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
+G+ +A + R+HRL+E +L L ++ DE+HEEAE+LEH VSD ++RLD+ L YP
Sbjct: 72 QGRAIALGMVRRHRLLETYLHEALGFSWDEVHEEAEILEHAVSDRLLDRLDRVLGYPSRD 131
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLL 182
PHG IP+ + + L + ++ R+ D + + L+ ++ L G + ++
Sbjct: 132 PHGDLIPRADGSSDDVSGSPLDALDGTAGGIVVRLPDRDPEALRAWKEAGLVPGARVAVV 191
Query: 183 EYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
DA G + +DG+ L + A AS I +
Sbjct: 192 ASDA-GGVTVLLEDGQMLLLDPAQASGIVV 220
>gi|116662114|ref|YP_829169.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
gi|116612866|gb|ABK05588.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
Length = 224
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 2/199 (1%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ +DYLK+I+ +E ++ IAE++ V S+ +KKL+ + LV
Sbjct: 6 LSSTAQDYLKLIWSATEWSATPMTVSSIAERLGVRPSTASDGIKKLVKQGLVTHAPYGSI 65
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ A ++ R+HRL+E FL+ L Y DE+H+EAE+LEH VS+ +ER+D+ L +
Sbjct: 66 ELTDAGREHAVAMVRRHRLLETFLVQMLGYGWDEVHDEAEILEHAVSEKLIERIDQKLGH 125
Query: 120 PKVCPHGGTIPQ-HGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDE 178
P PHG IP G P + T V + + + Q+L+Y + L
Sbjct: 126 PTRDPHGDPIPTPEGHPHLPAATQLSAADTGRAVEITRISDADPQMLRYFTELGLAPDTR 185
Query: 179 LRLLEYDAFAGAYTIEKDG 197
L + E+ +A TI G
Sbjct: 186 LFVREHRPYADVTTIRLQG 204
>gi|145294200|ref|YP_001137021.1| hypothetical protein cgR_0157 [Corynebacterium glutamicum R]
gi|57158014|dbj|BAD83988.1| putative regulatory protein [Corynebacterium glutamicum]
gi|140844120|dbj|BAF53119.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 232
Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 1 MTPNKEDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+TP +DYLK+I+ +E I+ +A +M + P VS+ VK+L + LV
Sbjct: 6 ITPVAQDYLKVIWAATEWGGPPITATALAARMGTTTPNVSDTVKRLAAQGLVEYQPYKPV 65
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
+LT++G+ A ++ R+HRL+E FL L Y +E+H+EAE LEH S+ +ER+D L
Sbjct: 66 MLTERGEKYAIAMVRRHRLLETFLATTLGYPWEEVHDEAERLEHAASETMIERIDALLGN 125
Query: 120 PKVCPHGGTIP 130
P PHG IP
Sbjct: 126 PATDPHGDPIP 136
>gi|149176784|ref|ZP_01855395.1| iron-dependent transcriptional regulator [Planctomyces maris DSM
8797]
gi|148844425|gb|EDL58777.1| iron-dependent transcriptional regulator [Planctomyces maris DSM
8797]
Length = 221
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 5/212 (2%)
Query: 6 EDYLKIIYELSERD--EKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
E+YLK I ++S + E IS ++A M+V+ V+ M+K L LV G LT
Sbjct: 4 ENYLKAILQISLQSGSEWISTGELARYMNVAPGTVTSMLKTLKQSKLVEYRPYEGASLTD 63
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
G+ A + R+HRLIE+FL L + D+IH EAE +EH VSD V+ +D++L +P+
Sbjct: 64 AGKHSAIRVLRRHRLIELFLFQTLKLSWDQIHAEAENMEHAVSDFLVDHIDEYLGFPETD 123
Query: 124 PHGGTIPQHGQPLVERYR--TTLKGVTE-MGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
PHG IP + Y TTL + + + +++ + L+++ + L+IG R
Sbjct: 124 PHGDPIPSIDGQMRRAYPNLTTLAACPDGVNLRIVQVTDQEPEFLRFLSRTGLEIGSVGR 183
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+ E + AG E G+Q+ + VA + +
Sbjct: 184 VTEKNIEAGIVISEWSGQQISMGIHVAENMKV 215
>gi|68536571|ref|YP_251276.1| manganese-dependent repressor MntR [Corynebacterium jeikeium K411]
gi|68264170|emb|CAI37658.1| manganese-dependent repressor MntR [Corynebacterium jeikeium K411]
Length = 238
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK I++L E +S +A M SE +K+L + LV L++
Sbjct: 11 QDYLKKIFDLQEWSGGGVSLSVLARHMDQRPSTASEAIKRLAAQGLVDHAPYGDIELSEA 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ +A ++ R+HRLIE FL NHL Y DE+H+EAEVLEH VS+ FV+R+ LN P P
Sbjct: 71 GRKIALAMVRRHRLIETFLCNHLGYGLDEVHDEAEVLEHAVSETFVDRIASLLNNPTRDP 130
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQH------HLKIGD 177
HG IP G + L ++ R+ D + L++Y+ +H H+ +G+
Sbjct: 131 HGDPIPDEGGHIPASSAFLLSDAHTGEQLIVDRISDRDAALVRYLTEHGVLPGVHITVGE 190
Query: 178 EL 179
+
Sbjct: 191 RV 192
>gi|38233226|ref|NP_938993.1| Putative diphtheria toxin repressor 2 [Corynebacterium diphtheriae
NCTC 13129]
gi|38199485|emb|CAE49136.1| Putative diphtheria toxin repressor 2 [Corynebacterium diphtheriae]
Length = 204
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 22 ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQILASSLYRKHRLIEV 81
+S ++A +MS P SE VKKL+ L+ ++ G +LT++G+ LA + R+HRL+E+
Sbjct: 9 VSLGELASRMSQKTPTASEAVKKLVARGLLDHERYGGIMLTEQGEALAKQMVRRHRLVEM 68
Query: 82 FLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIPQHGQPLVERYR 141
FL L + DE+HEEAE+LEH ++D ++R+D L P PHG IP + +V+
Sbjct: 69 FLFETLGFGWDEVHEEAEILEHAMTDKLLQRIDDHLGNPSRDPHGDPIPSE-EGIVDSVP 127
Query: 142 TTLKGVTEMG-VYLLKRVQD-NFQLLKYMEQH 171
G +G +++R+ D + LL+Y+ +H
Sbjct: 128 IHQLGEFAVGEEVIIERIHDRDANLLRYLAEH 159
>gi|15807523|ref|NP_296259.1| iron dependent repressor, putative [Deinococcus radiodurans R1]
gi|6460364|gb|AAF12080.1|AE002083_4 iron dependent repressor, putative [Deinococcus radiodurans R1]
Length = 232
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++P+ EDYLK +Y L + K+S + +A + V+ +V+ M++KL + LV G
Sbjct: 5 LSPSAEDYLKHLYGLGQSG-KVSTQALAAALGVAPASVTGMLRKLTEQGLVSHAPYQGAR 63
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G+ +A + R HRL+E+FL L DE+H+EAE LEH +S+ R+ +L P
Sbjct: 64 LTAEGERVALEVLRHHRLLELFLHRALGVPLDEVHDEAEALEHALSERLEARIAAWLGDP 123
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDEL 179
PHG IP L R L + ++ RV D + + L+ + L G L
Sbjct: 124 THDPHGDPIPTLEGELPARAERRLSQLAPGDHAVIARVPDGDAEQLRTLVGARLTPGARL 183
Query: 180 RLLEYDAFAGAYTIE-----KDGEQLQVTSAVASQIYI 212
++ D+ G T++ K G+ L + VA+Q+ +
Sbjct: 184 QIRSVDSALGTLTVQVGPSGKGGQALTLALGVAAQVQV 221
>gi|125624050|ref|YP_001032533.1| transcriptional regulator [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492858|emb|CAL97815.1| transcriptional regulator [Lactococcus lactis subsp. cremoris
MG1363]
Length = 217
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 2 TPNKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+ N++DYLK IY L +E +E +S IA+K+SVS+P+ +EM+K+L ++LV+ G L
Sbjct: 4 SKNEQDYLKAIYSLRNENNESVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYYGVL 63
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G A + + HR+ E FL + YT +E+H+EAE LEH S +E L + YP
Sbjct: 64 LTDLGTHEARFILKSHRVWESFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLMGYP 123
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDN----FQLLKYMEQHHLKIG 176
+ PHG IP L TL Y + +++ F+ L+ H +KI
Sbjct: 124 ETDPHGSEIPTESFWLKNEVELTLDEAQVAQTYHVTAIEEKGKAFFEKLELSLPHLIKII 183
Query: 177 DEL 179
++L
Sbjct: 184 EKL 186
>gi|116512096|ref|YP_809312.1| Mn-dependent transcriptional regulator [Lactococcus lactis subsp.
cremoris SK11]
gi|116107750|gb|ABJ72890.1| Mn-dependent transcriptional regulator [Lactococcus lactis subsp.
cremoris SK11]
Length = 217
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 2 TPNKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+ N++DYLK IY L +E +E +S IA+K+SVS+P+ +EM+K+L ++LV+ G L
Sbjct: 4 SKNEQDYLKAIYSLRNENNESVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYYGVL 63
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G A + + HR+ E FL + YT +E+H+EAE LEH S +E L + YP
Sbjct: 64 LTDLGIHEARFILKSHRVWESFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLMGYP 123
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDN----FQLLKYMEQHHLKIG 176
+ PHG IP L TL Y + +++ F+ L+ H +K+
Sbjct: 124 ETDPHGSEIPTESFWLKNEVELTLDEAQVAQTYHVTAIEEKGKAFFEKLELSLPHLIKVI 183
Query: 177 DEL 179
++L
Sbjct: 184 EKL 186
>gi|148658078|ref|YP_001278283.1| FeoA family protein [Roseiflexus sp. RS-1]
gi|148570188|gb|ABQ92333.1| FeoA family protein [Roseiflexus sp. RS-1]
Length = 237
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T + +DYLK I+++ ++S +AE++ S +V+ M+KKL +L+ + G +L
Sbjct: 7 TESVQDYLKTIFDIQREQGRVSTTVLAERLRNSPASVTGMLKKLASLNLIDYEPYQGAVL 66
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T G+ +A + R HRLIE +L L D +H+EAE EH +S+ +R+D L YP
Sbjct: 67 TPAGEKIALEVIRHHRLIERYLAEALGVPWDRVHDEAEKWEHVLSEDLEDRIDAVLGYPT 126
Query: 122 VCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELR 180
PHG IP L + T L + + V D + +L+Y + L+ G ++
Sbjct: 127 TDPHGAPIPTRDGALPPPHATRLSDLQTGQSATVAEVSDHDPAMLRYFAELGLRPGVDVT 186
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
++ F G T+ + + + VA I +
Sbjct: 187 VVAVAPFGGPLTVRLEDVEHALGREVAGYIAV 218
>gi|68552067|ref|ZP_00591460.1| Iron dependent repressor:FeoA [Prosthecochloris aestuarii DSM 271]
gi|68241190|gb|EAN23458.1| Iron dependent repressor:FeoA [Prosthecochloris aestuarii DSM 271]
Length = 239
Score = 96.7 bits (239), Expect = 8e-19, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 8 YLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQI 67
YL ++ L ER ++S +AE S VSE V++L +L + + L+ +G
Sbjct: 20 YLLTVFRLVERGGEVSISHLAEATGHSMSTVSEKVRRLTRRGYLLHEWRGAVTLSAEGWR 79
Query: 68 LASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGG 127
A L RK RLIE FL+ Y ++H +A LEH +SD + L++ L+YP+ PHG
Sbjct: 80 YAGRLLRKRRLIETFLVCQAGYNVYDVHVDACRLEHVISDRLTDALERMLDYPRHDPHGH 139
Query: 128 TIPQHGQPLVERYRTTLKGVTEMGVY--LLKRVQDNFQLLKYMEQHHLKIGDELRLLEYD 185
IP + Y +L V + G + ++ ++ + LKY+++ G RLL
Sbjct: 140 PIPDKEGVISAAYTVSLT-VLDEGCHAEVVSLNSEDMERLKYLDELGFSPGVTFRLLHKA 198
Query: 186 AFAGAYTIEKDGEQLQVTSAVASQI 210
F G TI+ +G + ++AS I
Sbjct: 199 PFDGPLTIDMNGYCFSLALSLASSI 223
>gi|62424544|ref|ZP_00379689.1| COG1321: Mn-dependent transcriptional regulator [Brevibacterium
linens BL2]
Length = 240
Score = 96.7 bits (239), Expect = 8e-19, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 26/230 (11%)
Query: 6 EDYLKIIYELSE-RDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+DYLK I+ E E ++ ++A + + V+E++K+L L+++ +LT
Sbjct: 11 QDYLKAIWSAQEWGGEPMTATELANRFGTTKANVTEVLKRLDELGLIVRVPYRLPVLTPA 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ +A S+ R+HRL+E FL+ L Y DE+H+EAE+LEH SD V+R+D FL P+ P
Sbjct: 71 GEKVALSMVRRHRLLETFLVESLGYGWDEVHDEAEILEHAASDRLVDRIDAFLGRPQADP 130
Query: 125 HGGTIPQ-HGQPLVERYRTTLKGVTEM--GVYLLKRVQD-NFQLLKYMEQHHLKIGDELR 180
HG IP GQ +E + +++ +TE G Y + RV D + +L ++ + + G ++
Sbjct: 131 HGDPIPDPEGQ--IESHDSSIL-LTEAGPGSYEVIRVSDADPAVLAHLAEAGVVPGAQVE 187
Query: 181 LLEY------------------DAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+ + DA A + GE ++ AVAS +Y+
Sbjct: 188 VADVSRSSSKVNESATDDGIGADAGIVAVKVAIGGESSELDRAVASAVYL 237
>gi|67919818|ref|ZP_00513379.1| Iron dependent repressor:FeoA [Chlorobium limicola DSM 245]
gi|67782565|gb|EAM41983.1| Iron dependent repressor:FeoA [Chlorobium limicola DSM 245]
Length = 241
Score = 96.7 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
+ + E Y++ I+ L+ + S ++A + S VSE VK L + ++ + + L
Sbjct: 3 SESSEMYIQTIFRLTRKQSNASISEVAAALGFSLSTVSEKVKHLTHDGYLVHEWREHVSL 62
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
++KGQI A + RK RLIE FL Y E+H+EA LEH +S+ + ++ L +PK
Sbjct: 63 SEKGQITACRILRKRRLIETFLYKFAGYGLHEVHDEACRLEHVISERLADAIEGMLGFPK 122
Query: 122 VCPHGGTIPQHGQPLVERYRTTL-KGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
PHG IP L ER TTL + E V + + +LLKY+ L G +
Sbjct: 123 TDPHGHDIPSKKGILPERKLTTLYETADEKSVTVAALQTTDPELLKYINDMGLTPGIRCQ 182
Query: 181 LLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+++ F G I+ + L ++ +AS I +
Sbjct: 183 VIDKAPFKGPVRIKVNDRILPLSVTMASLIEV 214
>gi|62425392|ref|ZP_00380526.1| COG1321: Mn-dependent transcriptional regulator [Brevibacterium
linens BL2]
Length = 209
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Query: 19 DEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQILASSLYRKHRL 78
D ++ +A+K+ V S+ ++KL E LV LT +G++ A ++ R+HRL
Sbjct: 6 DAPVTTTALAQKVGVRQSTTSDAIRKLSDEGLVAHTPYGSIALTAQGRVYALAMVRRHRL 65
Query: 79 IEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIPQHGQPLVE 138
IE FL+ L YT D++H EAE LEH VSD V+R+ + L++P PHG IP +
Sbjct: 66 IETFLVEVLGYTWDQVHNEAETLEHAVSDFMVDRIAEHLDHPDRDPHGDPIPAADGTIDR 125
Query: 139 RYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLEYDAFAGAYTIEKDG 197
L V ++R+ D + LL+++ ++ + +G F+ + I +G
Sbjct: 126 PAAIPLTHVGTGSRVRVERISDSDPNLLQFLAEYGIHVGSYFSTEAGPPFSDSIVIHLEG 185
>gi|118047649|ref|ZP_01516281.1| FeoA [Chloroflexus aggregans DSM 9485]
gi|117995883|gb|EAV10092.1| FeoA [Chloroflexus aggregans DSM 9485]
Length = 308
Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 76/130 (58%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+TP EDYLK IY L ++ ++ + E+ +V+ M+KKL +LV G +
Sbjct: 86 ITPAIEDYLKAIYLLQQQVGAVTTTLLGEQRGSRPASVTGMIKKLAEMNLVQHTPYQGVV 145
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ +A + R HRL+E++L+ L Y+ DE+HEEAE LEH +S+ R+ + L YP
Sbjct: 146 LTPAGERIALEVIRHHRLLELYLVEALGYSWDEVHEEAERLEHHISEKLEARIAERLGYP 205
Query: 121 KVCPHGGTIP 130
PHG IP
Sbjct: 206 DFDPHGDPIP 215
>gi|149277010|ref|ZP_01883152.1| transcriptional regulator [Pedobacter sp. BAL39]
gi|149231887|gb|EDM37264.1| transcriptional regulator [Pedobacter sp. BAL39]
Length = 226
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 119/220 (54%), Gaps = 5/220 (2%)
Query: 1 MTPNKEDYLKIIYELSERDEK---ISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQA 57
++ +E+YLK + +LS ++E+ ++A + V ++M+KKL ++LV K
Sbjct: 2 LSHTEENYLKALLKLSFQNEEKPEAGTNEMAAYLGVKPATATDMLKKLKEKELVTYKKYG 61
Query: 58 GYLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFL 117
LLT+ G+ ++ RKHRL E FL L+++ DE+HE AE LEH S V +L++FL
Sbjct: 62 KILLTELGRAKGIAILRKHRLWETFLYEKLDFSWDEVHEVAEQLEHIQSPKLVNKLEEFL 121
Query: 118 NYPKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQL-LKYMEQHHLKIG 176
++P+ PHG IP+ L + L V + V+D + L+Y+E+ + IG
Sbjct: 122 DFPEFDPHGDPIPRANGELPTVDKVLLTDVKAGESCQVVAVKDTSTVFLQYLEKLQVTIG 181
Query: 177 DELRLLEYDAFAGAYTIE-KDGEQLQVTSAVASQIYIEKK 215
++++E F G+ I+ + V+ A ++++KK
Sbjct: 182 TLVKVMEVVDFDGSMNIQIASSDPRNVSMKFAESLFVKKK 221
>gi|76260419|ref|ZP_00768055.1| Iron dependent repressor:Iron dependent repressor:FeoA
[Chloroflexus aurantiacus J-10-fl]
gi|76164668|gb|EAO58812.1| Iron dependent repressor:Iron dependent repressor:FeoA
[Chloroflexus aurantiacus J-10-fl]
Length = 233
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+TP EDYLK IY L ++ ++ + E+ +V+ M+KKL +LV G +
Sbjct: 13 ITPAIEDYLKAIYLLQQQVGAVTTTLLGEQRGSRPASVTGMIKKLAEMNLVQHTPYQGVI 72
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ +A + R HRL+E++L+ L Y+ DE+HEEAE LEH +S+ R+ + L +P
Sbjct: 73 LTPAGERIALEVIRHHRLLELYLVEALGYSWDEVHEEAERLEHHISEKLEARIAERLGFP 132
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDN-FQLLKYMEQHHLKIGDEL 179
PHG IP L L + V + RV+D + L+Y+ L G +
Sbjct: 133 DFDPHGDPIPGIDGVLPTTRAIRLADLPLNQVARIVRVRDQAAERLRYLADLGLVPGARV 192
Query: 180 RLLEYDAFAGAYTIE 194
++ F G T++
Sbjct: 193 TVVASAPFDGPLTVQ 207
>gi|118048897|ref|ZP_01517456.1| iron dependent repressor [Chloroflexus aggregans DSM 9485]
gi|117994594|gb|EAV08876.1| iron dependent repressor [Chloroflexus aggregans DSM 9485]
Length = 237
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T + +YL++IY L+ R+E + ++A M V P V+ +V +LL + + ++ L
Sbjct: 22 TAKEREYLEVIYYLAARNEPVIAARLARWMKVQPPTVTHIVARLLEKGFIERNAHGEITL 81
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T G LA + R+HR++E FL++ + IHEEA LEH +S V ER+ + +
Sbjct: 82 TPTGLKLAEEMVRRHRILERFLVDVMGLPWHLIHEEAVRLEHALSPVMEERIMALVGHAT 141
Query: 122 VCPHGGTIPQHGQPLV----ERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGD 177
CPHG IP GQ V R TT G + M + + ++ ++ ++E + L G
Sbjct: 142 TCPHGNPIP--GQCDVYAGAARLDTTQAGQSFMIRRIAEEAEEETPIVAFLEANGLVPGA 199
Query: 178 ELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIY 211
E + + G T+++ G + V + +A I+
Sbjct: 200 EFVIADNIPSIGV-TLQRPGLSITVPAHIAELIW 232
>gi|15673238|ref|NP_267412.1| metalloregulator [Lactococcus lactis subsp. lactis Il1403]
gi|12724229|gb|AAK05354.1|AE006357_9 metalloregulator [Lactococcus lactis subsp. lactis Il1403]
Length = 217
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 2 TPNKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+ N++DYLK IY L +E + +S IA+K+SVS+P+ +EM+K+L ++LV+ G
Sbjct: 4 SKNEQDYLKAIYSLKNENNGSVSINAIAQKLSVSSPSATEMIKRLAKKELVIHKPYYGVS 63
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G A + + HR+ E FL + YT +E+H+EAE LEH S +E L + YP
Sbjct: 64 LTDLGNHEARFILKSHRVWETFLFEKVGYTMEEVHDEAENLEHASSPRLIESLYVLMGYP 123
Query: 121 KVCPHGGTIP 130
PHG IP
Sbjct: 124 ATDPHGSEIP 133
>gi|76258459|ref|ZP_00766114.1| Iron dependent repressor:FeoA [Chloroflexus aurantiacus J-10-fl]
gi|76166543|gb|EAO60668.1| Iron dependent repressor:FeoA [Chloroflexus aurantiacus J-10-fl]
Length = 240
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 76/133 (57%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
T + +YL++IY L+ R+E + ++A M V P V+ +V +LL + L+ ++ L
Sbjct: 22 TAKEREYLEVIYYLASRNEPVIAARLARWMKVQPPTVTHIVSRLLEKGLIERNAHGEITL 81
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T G LA ++ R+HR++E FL++ + IHEEA LEHT+S V ER+ + +
Sbjct: 82 TATGFQLAEAMVRRHRILEHFLVDVMGLPWHLIHEEAVRLEHTLSPVMEERIMALVGHAT 141
Query: 122 VCPHGGTIPQHGQ 134
CPHG IP +
Sbjct: 142 TCPHGNPIPGQNE 154
>gi|94986367|ref|YP_605731.1| iron (metal) dependent repressor, DtxR family [Deinococcus
geothermalis DSM 11300]
gi|94556648|gb|ABF46562.1| iron (metal) dependent repressor, DtxR family [Deinococcus
geothermalis DSM 11300]
Length = 221
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++P+ EDYLK +Y L + K++ + +A+ + V + + M++KL + LV G
Sbjct: 6 LSPSAEDYLKHLYVLGQAG-KVTTQALADALGVVPASATGMLRKLTEQGLVAHAPYQGAQ 64
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +GQ +A + R HRL+E+FL L DE+HEEAE LEH +S+ R+ +L P
Sbjct: 65 LTAEGQRVALEVLRHHRLLELFLHRALGVPLDEVHEEAEQLEHALSERLEARIAAWLGDP 124
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQL-LKYMEQHHLKIGDEL 179
PHG IP + R L + + R+ DN L+ + L G +
Sbjct: 125 THDPHGDPIPTLAGEVPARAERRLTQLAPGEGATIARIPDNDPAGLRALVAAGLTPGVAV 184
Query: 180 RLLEYDAFAGAYTIE-KDGEQLQVTSAVASQIYI 212
+L + D G T+ G L + VA+Q+ +
Sbjct: 185 KLQQVDVPLGTLTVTLPGGGPLTLALGVAAQVQV 218
>gi|110667522|ref|YP_657333.1| transcription regulator SirR [Haloquadratum walsbyi DSM 16790]
gi|109625269|emb|CAJ51691.1| transcription regulator SirR [Haloquadratum walsbyi DSM 16790]
Length = 315
Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Query: 6 EDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
EDYLK IY L +E+ +S +A+ + + V+ M + L +L++ +K G LT +
Sbjct: 7 EDYLKSIYRLQAEKGPPVSTSAVADTLEKTPATVTSMFETLTDRELLIYEKYEGVELTTE 66
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ +A ++ R+HRL+E +L + L Y E+H EA+ LEH +S+VF R+ L+ P+V P
Sbjct: 67 GETVALAVIRRHRLLESYLADQLGYKWSEVHGEADALEHHISEVFERRVAAALDDPQVDP 126
Query: 125 HGGTIP 130
HG IP
Sbjct: 127 HGDPIP 132
>gi|81253186|ref|ZP_00877746.1| COG1321: Mn-dependent transcriptional regulator [Mycobacterium
tuberculosis C]
Length = 169
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 50 LVLKDKQAGYLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVF 109
+V +K LT + A ++ R+HRL+E FL+N L Y DE+H+EAEVLEH VSD
Sbjct: 1 MVDHEKYGAVTLTDSERRAALAMVRRHRLLETFLVNELGYRWDEVHDEAEVLEHAVSDRL 60
Query: 110 VERLDKFLNYPKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYM 168
+ R+D L +P+ PHG IP + L + + R+ D + Q+L+Y
Sbjct: 61 MARIDAKLGFPQRDPHGDPIPGADGQVPTPPARQLWACRDGDTGTVARISDADPQMLRYF 120
Query: 169 EQHHLKIGDELRLLEYDAFAGAYTI---EKDGEQLQVTSAVASQIYI 212
+ + LR+L FAG ++ DG + + S A I++
Sbjct: 121 ASIGISLDSRLRVLARREFAGMISVAIDSADGATVDLGSPAAQAIWV 167
>gi|15639160|ref|NP_218606.1| cation-activated repressor protein (troR) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|1777937|gb|AAC45729.1| TroR [Treponema pallidum]
gi|3322435|gb|AAC65157.1| cation-activated repressor protein (troR) [Treponema pallidum
subsp. pallidum str. Nichols]
Length = 153
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Query: 6 EDYLKIIYEL--SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
E+YLK + + R E++ +++ + V+ +S MVK+L V + + G LT+
Sbjct: 10 ENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRTHRLGCTLTR 69
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
KG + S++ RKHRL+E FL L A +H+EAE+LEH SD ++ +D++L YP
Sbjct: 70 KGAVFGSAVLRKHRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVIDRYLQYPTRD 129
Query: 124 PHGGTIPQ 131
PHG IP+
Sbjct: 130 PHGQPIPR 137
>gi|73668133|ref|YP_304148.1| iron dependent repressor [Methanosarcina barkeri str. Fusaro]
gi|72395295|gb|AAZ69568.1| iron dependent repressor [Methanosarcina barkeri str. Fusaro]
Length = 221
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 6 EDYLK-IIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
E+YL+ I+Y + + KQI+E+++VS P+V+EM+KKL LV G LTK+
Sbjct: 7 EEYLETILYLIRKNQGPAKTKQISEELNVSPPSVTEMIKKLHSSGLVEYTPYQGVELTKQ 66
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G A + RKH+++E FL++ L++ E H+EA LEH VSD +E++ +FL P+ CP
Sbjct: 67 GTDQAIKIKRKHQVLETFLVDVLDFDRKEAHKEACELEHAVSDAVLEKIYEFLGCPEYCP 126
Query: 125 HGGTI 129
G I
Sbjct: 127 DGNPI 131
>gi|15678242|ref|NP_275357.1| iron repressor [Methanothermobacter thermautotrophicus str. Delta
H]
gi|2621260|gb|AAB84720.1| iron repressor [Methanothermobacter thermautotrophicus str. Delta
H]
Length = 241
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 19/235 (8%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ N E+YL+ IY LS+ + ++ I+ +M ++ +V++M+KKL V G +
Sbjct: 7 LSENIEEYLETIYRLSDSRKPVTTTDISREMKIAPASVTQMLKKLDSNGYVKYSPYRGAV 66
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G +A + RKHRL+E FL + L + IH +A +EH++SD L LN P
Sbjct: 67 LTDRGYRIARRITRKHRLLERFLHDVLGIKRERIHRQACEMEHSLSDDAERALCHLLNMP 126
Query: 121 KVCPHGGTIP------QHGQPLVERYRT----------TLKGVTEMGVYLLKRV---QDN 161
CP IP Q + +E LK +TEM RV + +
Sbjct: 127 GECPDEKPIPACEFKFQTCEECIEMKDADIEEIGCRDENLKSLTEMDENQSGRVSFIRGD 186
Query: 162 FQLLKYMEQHHLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKA 216
+++++ + + IG L +++ +G +E G ++ + +A ++IE +
Sbjct: 187 YRVVRRLMDMGITIGAPLTMIKRAPLSGPIEVEIRGSRVALGRDIADNVFIETEG 241
>gi|20093126|ref|NP_619201.1| iron dependent repressor [Methanosarcina acetivorans C2A]
gi|19918464|gb|AAM07681.1| iron dependent repressor [Methanosarcina acetivorans C2A]
Length = 224
Score = 87.0 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 6 EDYLK-IIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
E+YL+ I+Y +++ KQIAE+++VS+P+V+EM+KKL V G LT+K
Sbjct: 10 EEYLETILYLITKNQGPAKTKQIAEELNVSSPSVTEMIKKLHSMGFVEYKPYQGVELTEK 69
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G A + RKH+++E FL + L++ E H EA LEH VSD +ERL FL P+ CP
Sbjct: 70 GAEEAVRIKRKHQVLETFLADVLDFDRKEAHREACELEHAVSDSVLERLYDFLGNPEYCP 129
Query: 125 HGGTI 129
G I
Sbjct: 130 DGHPI 134
>gi|21227136|ref|NP_633058.1| Transcriptional repressor [Methanosarcina mazei Go1]
gi|20905467|gb|AAM30730.1| Transcriptional repressor [Methanosarcina mazei Go1]
Length = 217
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Query: 2 TPNKEDYLK-IIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
T E+YL+ I+Y +++ KQIAE+++VS+P+V+EM+KKL V G
Sbjct: 3 TDRLEEYLETILYLITKNQSPAKTKQIAEELNVSSPSVTEMIKKLHSMGFVEYKPYQGVE 62
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT+KG A + RKH+++E FL L++ E H+EA LEH VSD +ER+ FL P
Sbjct: 63 LTEKGAEEAVRIKRKHQVLETFLAEVLDFDRREAHKEACELEHAVSDSVLERIYDFLGNP 122
Query: 121 KVCPHGGTI 129
+ CP G I
Sbjct: 123 EYCPDGHPI 131
>gi|55980723|ref|YP_144020.1| transcriptional repressor [Thermus thermophilus HB8]
gi|55772136|dbj|BAD70577.1| transcriptional repressor [Thermus thermophilus HB8]
Length = 219
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 4/214 (1%)
Query: 1 MTPNKEDYLKIIYELSER-DEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
+T +EDYLK ++ L E + + +AE++SV P+V+EM+KKL L+ + G
Sbjct: 6 LTEAQEDYLKHLFLLEEALGGPVPTQALAERLSVKPPSVTEMLKKLKALGLLEHEPYRGA 65
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT++G+ +A + R HRL+E +L L Y +E+H+EAE LEH +S+ ER+ ++L +
Sbjct: 66 RLTERGRKVALEVLRHHRLLEAYLHQALGYGWEEVHQEAERLEHVISEDLEERIAEYLGH 125
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDEL 179
P PHG IP L L + + + + L + + L G L
Sbjct: 126 PPFDPHGDPIPTKDLTLPSSKALPLTEAPLGRARVARALAQDRGTLNLLARLGLVPGKPL 185
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
R+LE +E +GE + A+A + +E
Sbjct: 186 RILER---GEGVRVEVEGEVYLLPRALAQAVGVE 216
>gi|46198706|ref|YP_004373.1| transcriptional repressor [Thermus thermophilus HB27]
gi|46196329|gb|AAS80746.1| transcriptional repressor [Thermus thermophilus HB27]
Length = 219
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQ-IAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ +EDYLK + L + + ++ Q +A+++ V P+V+EM+KKL LV G
Sbjct: 6 LSEAQEDYLKALLLLELEEGRPASTQALAQRLGVRPPSVTEMLKKLAGLGLVQYTPYQGA 65
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
LT G+ +A + R HRL+E +L L Y +E+H+EAE LEH +S+ ER+ ++L +
Sbjct: 66 SLTPLGRQIALKILRHHRLLEAYLHQALGYGWEEVHQEAERLEHVISEDLEERIAEYLGH 125
Query: 120 PKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDEL 179
P PHG IP L L + + + + L + + L G L
Sbjct: 126 PPFDPHGDPIPTKDLTLPSSKALPLTEAPLGRARVARALAQDRGTLNLLARLGLVPGKPL 185
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIE 213
R+LE +E +GE + A+A + +E
Sbjct: 186 RILER---GEGVRVEVEGEVYLLPRALAQAVGVE 216
>gi|116332892|ref|YP_794419.1| Mn-dependent transcriptional regulator [Lactobacillus brevis ATCC
367]
gi|116098239|gb|ABJ63388.1| Mn-dependent transcriptional regulator [Lactobacillus brevis ATCC
367]
Length = 216
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 4 NKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
N YLKII E + ++SNKQI +VS V+EM ++L LV + + G LT
Sbjct: 3 NHHTYLKIIAECNFARPRVSNKQIIAFANVSPATVTEMTRQLQKCGLVNRHRYTGVTLTD 62
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
+G+ LA+ L K+RL EVFL HL+ +I E+A + T+ V L FL++P+
Sbjct: 63 QGRELATRLLYKYRLCEVFLAQHLHLPLSQIPEQAWQMADTLEPPTVTALATFLDHPQQS 122
Query: 124 PHGGTIPQ---HGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELR 180
P GG + + ++ + + + T++ YL + L+ Y + HL I L
Sbjct: 123 PFGGDMTTDLLNDATVMPLSQLSDRTPTKLVSYL-----ETPSLVAYFQHCHLTINQPLW 177
Query: 181 LLEYDAFAGAYTIEKDG-EQLQVTSAVASQIYIEKK 215
LL D +E E++ V + A +Y++KK
Sbjct: 178 LLRRDEDLNFLYLETTAHEEIIVNLSAADYLYVQKK 213
>gi|41408993|ref|NP_961829.1| hypothetical protein MAP2895 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41397352|gb|AAS05212.1| hypothetical protein MAP_2895 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 149
Score = 83.2 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 72 LYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIP- 130
+ R+HRL+E FL+N L Y DE+H+EAEVLEH VSD V R+D L +P+ PHG IP
Sbjct: 1 MVRRHRLLETFLVNELGYAWDEVHDEAEVLEHAVSDRLVARIDAKLGFPQRDPHGDPIPA 60
Query: 131 QHGQ-PLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYMEQHHLKIGDELRLLEYDAFA 188
GQ P + G + G + R+ D + ++L+Y + + LR+L FA
Sbjct: 61 TDGQVPTPPARQLWACGDGDTGT--VARISDADSEMLRYFTDVGINLDSRLRVLTRREFA 118
Query: 189 GAYTI---EKDGEQLQVT--SAVASQIYI 212
G ++ DG + V S A I++
Sbjct: 119 GMISVAIESGDGAETTVDLGSPAARAIWV 147
>gi|150400304|ref|YP_001324071.1| iron dependent repressor [Methanococcus vannielii SB]
gi|150013007|gb|ABR55459.1| iron dependent repressor [Methanococcus vannielii SB]
Length = 148
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 1 MTPNKEDYLKIIYE-LSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ N EDYL+ I+ + E+ + ++A M+V AV+ M KKL + L+ + G
Sbjct: 16 VSQNIEDYLETIFLFIKEKKRPVKTTELARLMNVQPAAVTSMAKKLSHDGLIHYEPYVGI 75
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
L + G+ +A + RKHR+IE FL LN D +EA +EH VSD +E+L +F++
Sbjct: 76 YLDEDGEEIAKNTLRKHRIIEYFLTEFLNLDLDFAKDEACKIEHVVSDKTIEKLYEFIDK 135
Query: 120 PKVCPHGGTI 129
P+ CPHG I
Sbjct: 136 PEKCPHGENI 145
>gi|72160653|ref|YP_288310.1| iron dependent repressor [Thermobifida fusca YX]
gi|71914385|gb|AAZ54287.1| iron dependent repressor [Thermobifida fusca YX]
Length = 236
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 34/234 (14%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I+EL E +IAE++ S P VS+ V ++ + LV + ++T++G
Sbjct: 11 EMYLRTIFELEEEGIVPLRARIAERLRQSGPTVSQTVARMERDGLVRVENDRHLVMTEEG 70
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+ + RKHRL E L++ + +++H EA EH +S+ ERL L P C H
Sbjct: 71 RRLATQVMRKHRLAERLLVDIIGLPWEDVHVEACRWEHVISEAVEERLIGLLKEPWTCAH 130
Query: 126 GGTIPQHGQPLVERY----------------------RTTLKGVTEMGVYLLKRVQDNFQ 163
G IP + VE Y R T++ ++E ++Q + +
Sbjct: 131 GNPIPGLDELGVEGYEPEPFASSSIVPIPEALSDTPTRVTIRRISE-------QIQSDTK 183
Query: 164 LLKYMEQHHLKIGDELRLLEYDAFAGAYTI---EKDGEQLQVTSAVASQIYIEK 214
+ +++ ++ G E+ L D G I KDGE +++ VAS I++ +
Sbjct: 184 TMLALKRTGVQPGKEVTLEASD--DGVRVIGGNGKDGESIELPRQVASLIFVTR 235
>gi|84489257|ref|YP_447489.1| predicted metal-dependent transcriptional regulator [Methanosphaera
stadtmanae DSM 3091]
gi|84372576|gb|ABC56846.1| predicted metal-dependent transcriptional regulator [Methanosphaera
stadtmanae DSM 3091]
Length = 238
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 75/124 (60%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ N E+YL+ IY+ S +D +I++ ++++ +V++M+KKL E V + G
Sbjct: 6 ISENVEEYLETIYKKSLKDNMAKTTEISKDLNIAPGSVTQMLKKLEEEGYVNYYQYKGVQ 65
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT KG +A S+ RKHRLIE FL L +++HE+A +EHT+SD ++ + L YP
Sbjct: 66 LTDKGFKVAISIVRKHRLIETFLYKTLGLDMEDLHEQACAMEHTLSDEAERKICQLLGYP 125
Query: 121 KVCP 124
CP
Sbjct: 126 DQCP 129
>gi|68229864|ref|ZP_00569054.1| Iron dependent repressor [Frankia sp. EAN1pec]
gi|68202452|gb|EAN16634.1| Iron dependent repressor [Frankia sp. EAN1pec]
Length = 246
Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ +YEL E ++ E++ VSAPA SE +L E LV T+KG
Sbjct: 28 EMYLRTLYELREEGITPLRARLVERLHVSAPAASESTARLANEGLVALADDRTVQFTEKG 87
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+++ RKHRL E+ L + +H EA EH +SD RL L PK CP
Sbjct: 88 LVRATAVMRKHRLAELLLTKVIGLDWALVHNEACRWEHVISDEVEARLTVLLGDPKRCPF 147
Query: 126 GGTIP---QHGQP----------LVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHH 172
G IP + QP ER T K VT ++ +R+Q + + ++ +
Sbjct: 148 GNEIPAQLETAQPPGVAPVSLLTSAERSNTGTKSVTV--AWISERLQTDEEAMRVLRDAA 205
Query: 173 LKIGDELRLLEYDAFAG-AYTIEKDGE-QLQVTSAVASQIYI 212
+ G +L L +A Y + DG+ + ++ + A+ +Y+
Sbjct: 206 IVPGAQLYL---NARGDRVYIAKPDGDSEAEIDRSTAALVYV 244
>gi|148642278|ref|YP_001272791.1| iron dependent transcriptional regulator (Fe2+-binding)
[Methanobrevibacter smithii ATCC 35061]
gi|148551295|gb|ABQ86423.1| iron dependent transcriptional regulator (Fe2+-binding)
[Methanobrevibacter smithii ATCC 35061]
Length = 236
Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 117/230 (50%), Gaps = 19/230 (8%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ N E+YL+++Y E+IS +++++ ++ +V++M+KKL + V G
Sbjct: 6 ISENIEEYLEVLYRNGSNKEQISTTTLSKELGIAPGSVTQMLKKLEKLNYVNYVPYKGAS 65
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G +A + RKHR++E FL+ LN + +HE+A +EHT+SD L L++P
Sbjct: 66 LTDEGMKIAQKITRKHRILEKFLIEVLNIKQENVHEQACKMEHTLSDEAERALCTMLHHP 125
Query: 121 KVCPHGGTIP---------------QHGQPLVERYRTTLKGVTEMGVY---LLKRVQDNF 162
+ P G IP + ++ R + L ++E+ ++ ++ N
Sbjct: 126 DLGPSDGLIPACDLEFSNCSQCFSVKDFDQVINR-KFNLLSISELNSSTEGIVSFIRGNS 184
Query: 163 QLLKYMEQHHLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+LL + + +G ++ +Y +G + I + ++++ +A+ I+I
Sbjct: 185 ELLDKISALGISVGSDIYYRDYHDDSGVFVISIGDKNIELSKDMANNIFI 234
>gi|147920271|ref|YP_685959.1| Fe-dependent transcription repressor (FeoA family) [uncultured
methanogenic archaeon RC-I]
gi|110621355|emb|CAJ36633.1| Fe-dependent transcription repressor (FeoA family) [uncultured
methanogenic archaeon RC-I]
Length = 222
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 69/119 (57%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E+YL+ I L+ + + IA+ M + P+VSEM+ KL + + G LT++G
Sbjct: 7 EEYLETILYLTRGGARAKTRDIAQAMGIKPPSVSEMLLKLRDQGYIDYMPYEGAALTEEG 66
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
+ A + RKH+L+E FL+ L D H+EA LEH+VSD +ER+ +L +P+ CP
Sbjct: 67 RAEAIRMERKHQLLETFLVGTLGVDTDTAHDEACELEHSVSDNTMERICSYLGHPRYCP 125
>gi|86739140|ref|YP_479540.1| iron dependent repressor [Frankia sp. CcI3]
gi|86566002|gb|ABD09811.1| iron dependent repressor [Frankia sp. CcI3]
Length = 254
Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ +YEL E ++ E++ VSAPA SE +L E LV T+KG
Sbjct: 33 EMYLRTLYELREEGIPPLRARLVERLHVSAPAASESTARLANEGLVCLADDRTVQFTEKG 92
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+++ RKHRL E+ L + +H EA EH +SD RL L PK CP
Sbjct: 93 LLRATAVMRKHRLAELLLTKVIGLDWALVHNEACRWEHVISDEVEARLTVLLGDPKRCPF 152
Query: 126 GGTIPQHGQ 134
G IP Q
Sbjct: 153 GNEIPPSQQ 161
>gi|126353497|ref|ZP_01710508.1| iron (metal) dependent repressor, DtxR family [Caldivirga
maquilingensis IC-167]
gi|126312151|gb|EAZ64605.1| iron (metal) dependent repressor, DtxR family [Caldivirga
maquilingensis IC-167]
Length = 196
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 27 IAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQILASSLYRKHRLIEVFLMNH 86
+A ++ V+ ++++ L E V+K + Y LT G +AS + KHR++EVFL
Sbjct: 18 VANELGVTPATAHKVIEHLENEHYVVKLSRGIYSLTSNGDEIASKMLAKHRILEVFL-GI 76
Query: 87 LNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIPQHGQPLVERYRTTLKG 146
L + E+H A LEH V+DV ++R+ L P CPHG P G+P R + G
Sbjct: 77 LGFNILEVHVHAHELEH-VNDVVIDRIYNMLGRPMTCPHGN--PIIGKPEGMRLSKSYPG 133
Query: 147 VTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAV 206
++ V ++ +L ++ QH L I D L ++ G TIE +G+++ V ++
Sbjct: 134 NV-----IITSVAESKNVLNFLIQHKLSINDRLAVVRRR--KGNVTIEVNGKRIIVDESI 186
Query: 207 ASQIYI 212
AS I +
Sbjct: 187 ASGIIV 192
>gi|116621297|ref|YP_823453.1| iron (metal) dependent repressor, DtxR family [Solibacter usitatus
Ellin6076]
gi|116224459|gb|ABJ83168.1| iron (metal) dependent repressor, DtxR family [Solibacter usitatus
Ellin6076]
Length = 218
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T +KE+YLK I E E + +A + VSAPAV+ +K+L + L+ +
Sbjct: 5 ITISKENYLKAIAEAESEGETVKAVTLARWLHVSAPAVTMAIKRLRRDALIHVAAEGQLS 64
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ +A+ L +H LIE L ++H+EAE LEH VS F +L + L
Sbjct: 65 LTAPGREIANRLLNRHHLIERMLTEIFGLEWYKVHDEAEQLEHAVSADFERKLIERLGVE 124
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMG----VYLLKRVQDNFQLLKYMEQHHLKIG 176
CPHG + +R R LK + E V ++ + + +LL++++ ++ G
Sbjct: 125 SECPHGNRVGMDSPG--DRRRRGLKTLDETAPGERVAVVSVFERDRELLEHLDSVGIRPG 182
Query: 177 DELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
EL +L A + GE+ + A+++++ +
Sbjct: 183 VELEVL---ADGAELELSAAGERFTLDRTSAARVWVAR 217
>gi|145594003|ref|YP_001158300.1| iron dependent repressor [Salinispora tropica CNB-440]
gi|145303340|gb|ABP53922.1| iron dependent repressor [Salinispora tropica CNB-440]
Length = 232
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E +IAE++ S P VS+ V ++ + L+ + LT G
Sbjct: 14 EMYLRTILELEEEGVPPLRARIAERLRQSGPTVSQTVARMERDGLLTVEGDRHLTLTDAG 73
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A S+ RKHRL E+ L+N + +E HEEA EH +SD +R+ LN P P+
Sbjct: 74 RDAAVSVMRKHRLAELLLVNVIGMPYEEAHEEACRWEHVMSDAVEQRVYDLLNRPTRSPY 133
Query: 126 GGTI----------PQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQL-LKYMEQHHLK 174
G I P +P G++ G +++R+ ++ Q + Q H
Sbjct: 134 GNPIPGLEALGSAGPSAAEPAEGERNLAFPGLS--GTVVVRRICESLQTNSDVLRQLHAA 191
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
D + +I++ G+++++ VAS++++
Sbjct: 192 GVDPGATVTVAQERDGVSIDRYGDRVRLPREVASRVFV 229
>gi|119882702|ref|ZP_01648970.1| iron (metal) dependent repressor, DtxR family [Salinispora
arenicola CNS205]
gi|119824609|gb|EAX27169.1| iron (metal) dependent repressor, DtxR family [Salinispora
arenicola CNS205]
Length = 232
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 66/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E +IAE++ S P VS+ V ++ + L+ + LT G
Sbjct: 14 EMYLRTILELEEEGVPPLRARIAERLRQSGPTVSQTVARMERDGLLTVEGDRQLTLTAAG 73
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A S+ RKHRL E+ L+N + +E HEEA EH +SD +R+ LN P P+
Sbjct: 74 RDAAVSVMRKHRLAELLLVNVIGLPYEEAHEEACRWEHVMSDAVEQRVYDLLNRPTRSPY 133
Query: 126 GGTIP 130
G IP
Sbjct: 134 GNPIP 138
>gi|111220376|ref|YP_711170.1| Iron-dependent repressor [Frankia alni ACN14a]
gi|111147908|emb|CAJ59574.1| Iron-dependent repressor [Frankia alni ACN14a]
Length = 229
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 63/125 (50%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ +YEL E ++ E++ VSAPA SE ++ E LV T+KG
Sbjct: 9 EMYLRTLYELREEGIPPLRARLVERLHVSAPAASESTARMANEGLVSLADDRTVQFTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+++ RKHRL E+ L + +H EA EH +SD RL L PK CP
Sbjct: 69 LLRATAVMRKHRLAELLLTKVIGLDWALVHNEACRWEHVISDEVEARLTVLLGDPKRCPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNEIP 133
>gi|111023768|ref|YP_706740.1| Fe(2+)-dependent transcriptional regulator [Rhodococcus sp. RHA1]
gi|110823298|gb|ABG98582.1| Fe(2+)-dependent transcriptional regulator [Rhodococcus sp. RHA1]
Length = 230
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/125 (37%), Positives = 69/125 (55%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+L LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLLVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA S+ RKHRL E L++ + +E+H EA EH +S+ RL + LN P P+
Sbjct: 69 RELAVSVMRKHRLAERLLVDVIGLKWEEVHAEACRWEHVMSEEVERRLVEVLNNPTTSPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|154241702|ref|ZP_02023264.1| iron dependent repressor [Candidatus Nitrosopumilus maritimus SCM1]
gi|154203518|gb|EDN89489.1| iron dependent repressor [Candidatus Nitrosopumilus maritimus SCM1]
Length = 150
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YLK I+ L ER E++ IA+ ++V P+V +M+KKL ++LV +K AG LT +G
Sbjct: 20 EMYLKAIWLLKERGEEVKISTIAKMLNVRQPSVVQMLKKLNAKNLVTYNK-AGVRLTDEG 78
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
Q + SS+ R RL+EV + + L DE E +EH ++ F + L L +P+ PH
Sbjct: 79 QTIGSSMMRNSRLLEVLMDSALKVDIDE--EMVCGIEHHMNKQFTDALCTMLKHPRTSPH 136
Query: 126 GGTIP 130
G IP
Sbjct: 137 GKEIP 141
>gi|50841968|ref|YP_055195.1| repressor [Propionibacterium acnes KPA171202]
gi|50839570|gb|AAT82237.1| repressor [Propionibacterium acnes KPA171202]
Length = 232
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ YEL E ++ +I E++ S P VS+ V ++ + LV+ + LT++G
Sbjct: 10 EMYLRTFYELLEEGVELRRARIVERLHQSGPTVSQTVARMERDGLVVVESDRSISLTQEG 69
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+A ++ RKHRL E L + D +H+EA EH +S +RL L P V P+
Sbjct: 70 HDVAQTVMRKHRLAECLLTQIIGLRPDLVHDEACRWEHVISGEVEKRLTGLLENPDVSPY 129
Query: 126 GGTIP 130
G +P
Sbjct: 130 GCPLP 134
>gi|28493079|ref|NP_787240.1| iron-dependent repressor ideR [Tropheryma whipplei str. Twist]
gi|28476119|gb|AAO44209.1| iron-dependent repressor ideR [Tropheryma whipplei str. Twist]
Length = 226
Score = 76.6 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 6 EDYLKIIYELSERD-EKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
E YL+ I L E I +I+E++ +AP V + + ++ + L++ +LT K
Sbjct: 9 EMYLRTIVNLEEEGISPIIKARISERIGHTAPTVFQTIARMQRDGLLVVSSNKSLILTSK 68
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ +A S+ RKHRL EV L + + + IH EA LEH +SD E L + LN P
Sbjct: 69 GRKIALSVVRKHRLAEVLLHDVVGLEWEHIHLEACRLEHVMSDHLEEHLRRILNNPSFTT 128
Query: 125 HGGTIPQHGQPLVERYRTTL 144
+G IP VE +R +
Sbjct: 129 YGTPIPPADSDFVEPFRDVI 148
>gi|91773812|ref|YP_566504.1| iron dependent repressor [Methanococcoides burtonii DSM 6242]
gi|91712827|gb|ABE52754.1| iron dependent repressor [Methanococcoides burtonii DSM 6242]
Length = 226
Score = 76.6 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
E+YL+ I L R + NK IAE++ S +VSEMV+KL E LV+ + G LT +
Sbjct: 7 EEYLETIDSLVKSRGTPVKNKDIAEELGFSQASVSEMVQKLADEGLVIHEPYHGVELTNR 66
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFL 117
G + +S+ RKH +IE F + L + H EA LEHTVSD+ VE + +L
Sbjct: 67 GVLQVNSIRRKHHVIETFFSDVLALEPEVAHNEACGLEHTVSDLVVESMCNYL 119
>gi|13399468|pdb|1FX7|A Chain A, Crystal Structure Of The Iron-Dependent Regulator (Ider)
From Mycobacterium Tuberculosis
gi|13399469|pdb|1FX7|B Chain B, Crystal Structure Of The Iron-Dependent Regulator (Ider)
From Mycobacterium Tuberculosis
gi|13399470|pdb|1FX7|C Chain C, Crystal Structure Of The Iron-Dependent Regulator (Ider)
From Mycobacterium Tuberculosis
gi|13399471|pdb|1FX7|D Chain D, Crystal Structure Of The Iron-Dependent Regulator (Ider)
From Mycobacterium Tuberculosis
gi|55670259|pdb|1U8R|A Chain A, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670260|pdb|1U8R|B Chain B, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670261|pdb|1U8R|C Chain C, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670262|pdb|1U8R|D Chain D, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670265|pdb|1U8R|G Chain G, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670266|pdb|1U8R|H Chain H, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670267|pdb|1U8R|I Chain I, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
gi|55670268|pdb|1U8R|J Chain J, Crystal Structure Of An Ider-Dna Complex Reveals A
Conformational Change In Activated Ider For
Base-Specific Interactions
Length = 230
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|15609848|ref|NP_217227.1| IRON-DEPENDENT REPRESSOR AND ACTIVATOR IDER [Mycobacterium
tuberculosis H37Rv]
gi|15842249|ref|NP_337286.1| iron-dependent repressor IdeR [Mycobacterium tuberculosis CDC1551]
gi|31793883|ref|NP_856376.1| IRON-DEPENDENT REPRESSOR AND ACTIVATOR IDER [Mycobacterium bovis
AF2122/97]
gi|81253269|ref|ZP_00877826.1| COG1321: Mn-dependent transcriptional regulator [Mycobacterium
tuberculosis C]
gi|121638586|ref|YP_978810.1| Iron-dependent repressor and activator ideR [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148662552|ref|YP_001284075.1| iron-dependent repressor IdeR [Mycobacterium tuberculosis H37Ra]
gi|148823900|ref|YP_001288654.1| iron-dependent repressor and activator ideR [Mycobacterium
tuberculosis F11]
gi|61226440|sp|P0A672|IDER_MYCTU Iron-dependent repressor ideR
gi|61226442|sp|P0A673|IDER_MYCBO Iron-dependent repressor ideR
gi|1171107|gb|AAA86057.1| similar to the Corynebacterium diptheriae diptheria toxin
repressor, Swiss-Prot Accession Number P33120
gi|2182002|emb|CAB09471.1| IRON-DEPENDENT REPRESSOR AND ACTIVATOR IDER [Mycobacterium
tuberculosis H37Rv]
gi|13882540|gb|AAK47100.1| iron-dependent repressor IdeR [Mycobacterium tuberculosis CDC1551]
gi|31619477|emb|CAD94915.1| IRON-DEPENDENT REPRESSOR AND ACTIVATOR IDER [Mycobacterium bovis
AF2122/97]
gi|121494234|emb|CAL72712.1| Iron-dependent repressor and activator ideR [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124601874|gb|EAY60884.1| iron-dependent repressor and activator ideR [Mycobacterium
tuberculosis C]
gi|134150881|gb|EBA42926.1| iron-dependent repressor and activator ideR [Mycobacterium
tuberculosis str. Haarlem]
gi|148506704|gb|ABQ74513.1| iron-dependent repressor IdeR [Mycobacterium tuberculosis H37Ra]
gi|148722427|gb|ABR07052.1| iron-dependent repressor and activator ideR [Mycobacterium
tuberculosis F11]
Length = 230
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|28572287|ref|NP_789067.1| iron-dependent repressor [Tropheryma whipplei TW08/27]
gi|28410418|emb|CAD66804.1| iron-dependent repressor [Tropheryma whipplei TW08/27]
Length = 217
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 8 YLKIIYELSERD-EKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQ 66
YL+ I L E I +I+E++ +AP V + + ++ + L++ +LT KG+
Sbjct: 2 YLRTIVNLEEEGISPIIKARISERIGHTAPTVFQTIARMQRDGLLVVSSNKSLILTSKGR 61
Query: 67 ILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHG 126
+A S+ RKHRL EV L + + + IH EA LEH +SD E L + LN P +G
Sbjct: 62 KIALSVVRKHRLAEVLLHDVVGLEWEHIHLEACRLEHVMSDHLEEHLRRILNNPSFTTYG 121
Query: 127 GTIPQHGQPLVERYRTTL 144
IP VE +R +
Sbjct: 122 TPIPPADSDFVEPFRDVI 139
>gi|118618674|ref|YP_907006.1| iron-dependent repressor and activator IdeR [Mycobacterium ulcerans
Agy99]
gi|118570784|gb|ABL05535.1| iron-dependent repressor and activator IdeR [Mycobacterium ulcerans
Agy99]
Length = 230
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 66/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGDRHLELTDKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|126009112|ref|ZP_01709682.1| hypothetical protein Faci_03000317 [Ferroplasma acidarmanus fer1]
Length = 207
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 4 NKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
N+EDY+K I+ L E + +++ + VS VSE + KL ++L+ ++ + YL TK
Sbjct: 6 NEEDYIKTIFSLCEAFGSANENMVSKDLGVSMATVSEYLSKLEGKELITRNNRDIYL-TK 64
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
+G +A + RKHR+ EVF + L + H +EHT+ D + + K L P C
Sbjct: 65 QGYSMAIPVIRKHRVSEVFAVKMLEVPWEYSHSAVMDIEHTIEDKYFDTFSKNLGNPLTC 124
Query: 124 PHGGTI 129
PHG I
Sbjct: 125 PHGNMI 130
>gi|134104576|pdb|2ISY|A Chain A, Crystal Structure Of The Nickel-Activated Two-Domain Iron-
Dependent Regulator (Ider)
gi|134104577|pdb|2ISY|B Chain B, Crystal Structure Of The Nickel-Activated Two-Domain Iron-
Dependent Regulator (Ider)
Length = 157
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAIAVMRKHRLAERLLVDVIGLPWEEVHAEAXRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|118465346|ref|YP_882781.1| iron-dependent repressor IdeR [Mycobacterium avium 104]
gi|118166633|gb|ABK67530.1| iron-dependent repressor IdeR [Mycobacterium avium 104]
Length = 229
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 66/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDRHLELTDKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|62391367|ref|YP_226769.1| metal-dependent transcriptional regulator [Corynebacterium
glutamicum ATCC 13032]
gi|21325300|dbj|BAB99921.1| Mn-dependent transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
gi|41326708|emb|CAF21190.1| metal-dependent transcriptional regulator [Corynebacterium
glutamicum ATCC 13032]
Length = 220
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDYL ++ E DE+ + ++AE + V+A VS +KKL E V LT G
Sbjct: 11 EDYLTALFRAEEWDEEPTTGKLAEVIGVTASTVSATLKKLNPEGFVNYRPYGDIELTPAG 70
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A ++ R+ R+IE +L L A E+H EA++LEH VS + +E++ + + YP + PH
Sbjct: 71 RDIAINVIRRRRIIETYLSEKLGLGAHELHGEADLLEHAVSPLVLEKMFQAVGYPTLDPH 130
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYM 168
G IP + L G+ + RV+D N +++Y+
Sbjct: 131 GDPIPTESGEMTINDGLMLLGLKAGASATVTRVRDGNPSVVRYL 174
>gi|3891798|pdb|2TDX| Chain , Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel
gi|3891903|pdb|1DDN|A Chain A, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And With Tox Dna Operator
gi|3891904|pdb|1DDN|B Chain B, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And With Tox Dna Operator
gi|3891905|pdb|1DDN|C Chain C, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And With Tox Dna Operator
gi|3891906|pdb|1DDN|D Chain D, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And With Tox Dna Operator
Length = 226
Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA+ EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEADRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|15827486|ref|NP_301749.1| iron dependent repressor [Mycobacterium leprae TN]
gi|20532135|sp|Q9CCB5|IDER_MYCLE Iron-dependent repressor ideR
gi|13093036|emb|CAC31394.1| iron dependent repressor [Mycobacterium leprae]
Length = 230
Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMERDGLLRVAGNRHLELTTKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RAMAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLIKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|6573375|pdb|1B1B|A Chain A, Iron Dependent Regulator
Length = 140
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|134104578|pdb|2ISZ|A Chain A, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form I
gi|134104579|pdb|2ISZ|B Chain B, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form I
gi|134104580|pdb|2ISZ|C Chain C, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form I
gi|134104581|pdb|2ISZ|D Chain D, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form I
gi|134104584|pdb|2IT0|A Chain A, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form Ii
gi|134104585|pdb|2IT0|B Chain B, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form Ii
gi|134104586|pdb|2IT0|C Chain C, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form Ii
gi|134104587|pdb|2IT0|D Chain D, Crystal Structure Of A Two-Domain Ider-Dna Complex Crystal
Form Ii
Length = 157
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL K LN P P
Sbjct: 69 RALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|134046009|ref|YP_001097495.1| iron dependent repressor [Methanococcus maripaludis C5]
gi|132663634|gb|ABO35280.1| iron dependent repressor [Methanococcus maripaludis C5]
Length = 134
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 1 MTPNKEDYLKIIYE-LSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ N EDYL+ I+ + E I ++A+ M+V AV+ M KKL + L+ G
Sbjct: 2 VSQNIEDYLENIFLFIRENKRPIKTTELAKLMNVQPAAVTSMAKKLHGDGLIDYQPYVGI 61
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
L + G+ +A RKHR+IE FL L + EEA +EH VSD +E+L +F++
Sbjct: 62 NLKESGEKIAKETIRKHRIIECFLTEILGLDLEFAQEEACKIEHAVSDKTIEKLYEFIDR 121
Query: 120 PKVCPHGGTI 129
P+ CPHG I
Sbjct: 122 PEKCPHGYKI 131
>gi|19553726|ref|NP_601728.1| Mn-dependent transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
Length = 211
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDYL ++ E DE+ + ++AE + V+A VS +KKL E V LT G
Sbjct: 2 EDYLTALFRAEEWDEEPTTGKLAEVIGVTASTVSATLKKLNPEGFVNYRPYGDIELTPAG 61
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A ++ R+ R+IE +L L A E+H EA++LEH VS + +E++ + + YP + PH
Sbjct: 62 RDIAINVIRRRRIIETYLSEKLGLGAHELHGEADLLEHAVSPLVLEKMFQAVGYPTLDPH 121
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQD-NFQLLKYM 168
G IP + L G+ + RV+D N +++Y+
Sbjct: 122 GDPIPTESGEMTINDGLMLLGLKAGASATVTRVRDGNPSVVRYL 165
>gi|21222784|ref|NP_628563.1| iron repressor [Streptomyces coelicolor A3(2)]
gi|899417|emb|CAA90389.1| iron repressor [Streptomyces lividans]
gi|8894744|emb|CAB95905.1| iron repressor [Streptomyces coelicolor A3(2)]
gi|12666513|emb|CAC28070.1| DmdR1 protein [Streptomyces coelicolor A3(2)]
Length = 230
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E +IAE++ S P VS+ V ++ + LV LT +G
Sbjct: 9 EMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVSVAADRHLELTDEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+ + RKHRL E L++ + +++H EA EH +S+ R+ + L +P P+
Sbjct: 69 RRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELLRHPTESPY 128
Query: 126 GGTIP--------QHGQPLVERYRTTL-------KGVTEMGVYLLKRVQDNFQLLKYMEQ 170
G IP P ++ +L +G T + + + +Q + QL+ + +
Sbjct: 129 GNPIPGLEELGETDGADPFLDEGMVSLADLDPGQEGKTVVVRRIGEPIQTDAQLMYTLRR 188
Query: 171 HHLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKK 215
++ G + + E AG + GE ++ + AS +++ K+
Sbjct: 189 AGVQPGSVVSVTES---AGGVLVGSGGEAAELEADTASHVFVAKR 230
>gi|145296525|ref|YP_001139346.1| hypothetical protein cgR_2435 [Corynebacterium glutamicum R]
gi|140846445|dbj|BAF55444.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 220
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/125 (37%), Positives = 72/125 (57%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDYL ++ E DE+ + ++AE + V+A VS +KKL LE V LT G
Sbjct: 11 EDYLTALFRAEEWDEEPTTGKLAEVIGVTASTVSATLKKLNLEGFVNYRPYGDIELTPAG 70
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A ++ R+ R+IE +L L A E+H EA++LEH VS +E++ + + YP + PH
Sbjct: 71 RDIAINVIRRRRIIETYLSEKLGLGAHELHGEADLLEHAVSPRVLEKMFQAVGYPTLDPH 130
Query: 126 GGTIP 130
G IP
Sbjct: 131 GDPIP 135
>gi|29830398|ref|NP_825032.1| iron dependent regulatory protein [Streptomyces avermitilis
MA-4680]
gi|29607509|dbj|BAC71567.1| putative iron dependent regulatory protein [Streptomyces
avermitilis MA-4680]
Length = 230
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E +IAE++ S P VS+ V ++ + LV LT++G
Sbjct: 9 EMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVAVASDRHLELTEEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+ + RKHRL E L++ + +++H EA EH +S+ R+ + L +P P+
Sbjct: 69 RRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELLRHPTESPY 128
Query: 126 GGTIP--------QHGQPLVERYRTTL-------KGVTEMGVYLLKRVQDNFQLLKYMEQ 170
G IP P ++ +L G T + + + +Q + QL+ + +
Sbjct: 129 GNPIPGLEELGEKDGADPFLDEGMVSLAELDPGADGKTVVVRRIGEPIQTDAQLMYTLRR 188
Query: 171 HHLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKK 215
++ G + + E G + GE ++ + VAS +++ K+
Sbjct: 189 AGVQPGSVVSVTES---PGGVLVGSGGEAAELEADVASHVFVAKR 230
>gi|38233999|ref|NP_939766.1| diphtheria toxin repressor [Corynebacterium diphtheriae NCTC 13129]
gi|38605713|sp|P33120|DTXR_CORDI Diphtheria toxin repressor (Iron-dependent diphtheria tox
regulatory element) (Tox regulatory factor)
gi|38200261|emb|CAE49945.1| diphtheria toxin repressor [Corynebacterium diphtheriae]
Length = 226
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V + G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAVPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELIDDLAHTIRIEE 225
>gi|16975069|pdb|1G3S|A Chain A, Cys102ser Dtxr
gi|16975070|pdb|1G3T|A Chain A, Cys102ser Dtxr
gi|16975071|pdb|1G3T|B Chain B, Cys102ser Dtxr
gi|16975073|pdb|1G3W|A Chain A, Cd-Cys102ser Dtxr
Length = 226
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEASRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|150403570|ref|YP_001330864.1| iron dependent repressor [Methanococcus maripaludis C7]
gi|150034600|gb|ABR66713.1| iron dependent repressor [Methanococcus maripaludis C7]
Length = 134
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 1 MTPNKEDYLKIIYE-LSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ N EDYL+ I+ + E I ++A+ M+V AV+ M KKL + L+ G
Sbjct: 2 VSQNIEDYLENIFLFIRENKRPIKTTELAKLMNVQPAAVTSMAKKLHGDGLIDYQPYIGI 61
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
L + G+ +A RKHR+IE FL L + EEA +EH VSD +E+L +F++
Sbjct: 62 NLKESGEKIAKETIRKHRIIECFLTEILGLDLEFAQEEACKIEHAVSDKTIEKLYEFIDR 121
Query: 120 PKVCPHGGTI 129
P+ CPHG I
Sbjct: 122 PEKCPHGYKI 131
>gi|5542114|pdb|1BI1| Chain , Structure Of Apo- And Holo-Diphtheria Toxin Repressor
gi|5542117|pdb|1BI3|A Chain A, Structure Of Apo- And Holo-Diphtheria Toxin Repressor
gi|5542118|pdb|1BI3|B Chain B, Structure Of Apo- And Holo-Diphtheria Toxin Repressor
gi|5821818|pdb|1BI0| Chain , Structure Of Apo- And Holo-Diphtheria Toxin Repressor
Length = 226
Score = 74.3 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEAXRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|54025749|ref|YP_119991.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54017257|dbj|BAD58627.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length = 228
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 68/125 (54%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+L LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLLVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A ++ RKHRL E L++ + +H EA EH +S+ RL + LN+P P+
Sbjct: 69 RSMAVAVMRKHRLAERLLVDIIGLDWQNVHAEACRWEHVMSEDVERRLVEVLNHPTTSPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|76802994|ref|YP_331089.1| transcription regulator [Natronomonas pharaonis DSM 2160]
gi|76558859|emb|CAI50454.1| transcription regulator [Natronomonas pharaonis DSM 2160]
Length = 223
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 2 TPNKEDYLKIIYEL-SERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+P E+Y+K ++ L +E +I ++AE + + + + MV+KL LV ++ G
Sbjct: 4 SPVVEEYVKQLHRLEAEHGRRIRTTELAEAVDRTKASTTSMVQKLDERGLVEHEEYGGTA 63
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ +A L RKHRL+E FL+ L+ H+EA+ LEH VSD +RL + L P
Sbjct: 64 LTPTGEAVADRLVRKHRLLETFLVEQLDLPEAVAHDEADRLEHHVSDGVTDRLAELLGAP 123
>gi|53794452|gb|AAU93783.1| diphtheria toxin repressor [Corynebacterium diphtheriae]
Length = 226
Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GRITLSHNGKDVELLDDLAHTIRIEE 225
>gi|1127152|pdb|1DPR|A Chain A, Diphtheria, Virulence, Dna-Binding, Iron-Regulation
Repressor Mol_id: 1; Molecule: Diphtheria Tox Repressor;
Chain: A, B; Synonym: Dtxr; Engineered: Yes
gi|1127153|pdb|1DPR|B Chain B, Diphtheria, Virulence, Dna-Binding, Iron-Regulation
Repressor Mol_id: 1; Molecule: Diphtheria Tox Repressor;
Chain: A, B; Synonym: Dtxr; Engineered: Yes
gi|2392674|pdb|2DTR| Chain , Structure Of Diphtheria Toxin Repressor
gi|5542115|pdb|1BI2|A Chain A, Structure Of Apo- And Holo-Diphtheria Toxin Repressor
gi|5542116|pdb|1BI2|B Chain B, Structure Of Apo- And Holo-Diphtheria Toxin Repressor
gi|144972|gb|AAA23296.1| toxin repressor protein (dtxR)
gi|144976|gb|AAA23299.1| diphtheria toxin repressor
Length = 226
Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|9955138|pdb|1C0W|A Chain A, Crystal Structure Of The Cobalt-Activated Diphtheria Toxin
Repressor-Dna Complex Reveals A Metal Binding Sh-Like
Domain
gi|9955139|pdb|1C0W|B Chain B, Crystal Structure Of The Cobalt-Activated Diphtheria Toxin
Repressor-Dna Complex Reveals A Metal Binding Sh-Like
Domain
gi|9955140|pdb|1C0W|C Chain C, Crystal Structure Of The Cobalt-Activated Diphtheria Toxin
Repressor-Dna Complex Reveals A Metal Binding Sh-Like
Domain
gi|9955141|pdb|1C0W|D Chain D, Crystal Structure Of The Cobalt-Activated Diphtheria Toxin
Repressor-Dna Complex Reveals A Metal Binding Sh-Like
Domain
Length = 225
Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 8 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 67
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 68 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 127
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 128 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 187
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 188 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 224
>gi|7110452|gb|AAF36925.1|AF221951_1 transcriptional regulatory protein DtxR [Rhodococcus erythropolis]
Length = 228
Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L++ LT KG
Sbjct: 9 EMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLMVAGDRHLELTDKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA S+ RKHRL E L++ + +++H EA EH +S+ RL LN P P+
Sbjct: 69 RDLAISVMRKHRLAERLLVDVIGLKWEDVHAEACRWEHVMSEEVERRLVVVLNNPTTSPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|53794450|gb|AAU93782.1| diphtheria toxin repressor [Corynebacterium diphtheriae]
Length = 226
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVRNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A + IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTMRIEE 225
>gi|48478220|ref|YP_023926.1| iron-dependent repressor [Picrophilus torridus DSM 9790]
gi|48430868|gb|AAT43733.1| iron-dependent repressor [Picrophilus torridus DSM 9790]
Length = 205
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 4 NKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTK 63
N EDYLK IY + + I++++ VS P VSE + KL L+ K LLT
Sbjct: 6 NLEDYLKEIYNNMDAFGSANESMISKRLKVSMPTVSEYLDKLRNRGLI-KSIGRDILLTD 64
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
+G LA + R+HR+ EV + +E E LEH ++D +V + K L P C
Sbjct: 65 RGMKLAYPVIRRHRIAEVMALKIFEVPWEETDSEVMDLEHAINDKYVPYVIKNLGNPDRC 124
Query: 124 PHGGTIPQHGQPLVERYRTTLKGV--TEMGVYLLKR-VQDNFQLLKYMEQHHLKIGDELR 180
P HG P+ + K + E GVY L R V ++ +LK + + + G E++
Sbjct: 125 P-------HGNPINPDQKMNDKSIFSVEPGVYTLSRIVYEDISILKKLVEINAFPGTEIK 177
Query: 181 LLEYD 185
+ + D
Sbjct: 178 IEKND 182
>gi|15988215|pdb|1FWZ|A Chain A, Glu20ala Dtxr
Length = 226
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEAEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEAXRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|144979|gb|AAA23301.1| diphtheria toxin repressor
Length = 226
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V + + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVAHMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|45358194|ref|NP_987751.1| putatuve iron dependent repressor [Methanococcus maripaludis S2]
gi|44920951|emb|CAF30187.1| putatuve iron dependent repressor [Methanococcus maripaludis S2]
Length = 134
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 1 MTPNKEDYLKIIYE-LSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGY 59
++ N EDYL+ I+ + E + ++A+ M V AV+ M KKL + L+ G
Sbjct: 2 VSQNIEDYLENIFLFIKENKRPVKTTELAKLMKVQPAAVTSMAKKLHGDGLIDYQPYIGI 61
Query: 60 LLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
L G+ +A RKHR+IE FL L + EEA +EH VSD +E+L +F++
Sbjct: 62 NLKSSGEKIAKETIRKHRIIEYFLTEILGLDLEFAQEEACKIEHAVSDKTIEKLYEFIDR 121
Query: 120 PKVCPHGGTI 129
P+ CPHG I
Sbjct: 122 PEKCPHGYKI 131
>gi|119715026|ref|YP_921991.1| iron dependent repressor [Nocardioides sp. JS614]
gi|119535687|gb|ABL80304.1| iron dependent repressor [Nocardioides sp. JS614]
Length = 228
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 68/125 (54%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + L+ + LT++G
Sbjct: 9 EMYLRTIYELVEEGIVPLRARIAERLHQSGPTVSQTVARMERDGLLTVEGDRHLQLTEEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
LA+ + RKHRL E L + + + +HEEA EH +S+ RL + L++P P+
Sbjct: 69 LRLATRVMRKHRLAERLLTDVIGLDWELVHEEACRWEHVMSETVERRLLRLLDHPTESPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|117927400|ref|YP_871951.1| iron (metal) dependent repressor, DtxR family [Acidothermus
cellulolyticus 11B]
gi|117647863|gb|ABK51965.1| iron (metal) dependent repressor, DtxR family [Acidothermus
cellulolyticus 11B]
Length = 255
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ LV + LT +G
Sbjct: 18 EMYLRTIYELEEEGVVPLRARIAERLGQSVPTVSQTVARMERHGLVHLEGDRRLELTPQG 77
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+ + R+HRL E L++ + + +HEEA EH +S+ RL + L +P P+
Sbjct: 78 RAAATRVMRRHRLAECLLVDVIGLDWELVHEEACRWEHVMSEEVERRLLEILGHPTESPY 137
Query: 126 GGTIP---QHGQP 135
G IP + G+P
Sbjct: 138 GNPIPGLDELGEP 150
>gi|13541769|ref|NP_111457.1| Metal-dependent transcription regulator [Thermoplasma volcanium
GSS1]
Length = 216
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 5 KEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+EDYLKII EL + IA+ + V + + + L+ +V K + Y+LT +
Sbjct: 8 EEDYLKIIQELVLYQDYAQLSDIAKSLQVKRQSARDEINHLIDLGMVKKIDRGKYVLTDQ 67
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G I A+ RKHR EV L + D + EA +EH +++ + R+ + N K CP
Sbjct: 68 GDIEANIFLRKHRTAEVLLSQCVGIEWDAVDREAMGIEHGMTEEIIHRVIERFN-AKRCP 126
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKR-VQDNFQLLKYMEQHHLKIGDELRLLE 183
HG IP + + + + E G ++ R + + ++L Y+ + + G +++++
Sbjct: 127 HGNPIPSPEGYVEKIDDVRITDLNETGDVIISRIIYETDEILNYLYANQILPGAKVKIIR 186
Query: 184 YDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
IEKDG L + ++A I +
Sbjct: 187 T---GFPLQIEKDGRLLSLDPSIAKAIRV 212
>gi|53794448|gb|AAU93781.1| diphtheria toxin repressor [Corynebacterium diphtheriae]
Length = 226
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|14325183|dbj|BAB60108.1| hypohtetical protein [Thermoplasma volcanium GSS1]
Length = 219
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 5 KEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+EDYLKII EL + IA+ + V + + + L+ +V K + Y+LT +
Sbjct: 11 EEDYLKIIQELVLYQDYAQLSDIAKSLQVKRQSARDEINHLIDLGMVKKIDRGKYVLTDQ 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G I A+ RKHR EV L + D + EA +EH +++ + R+ + N K CP
Sbjct: 71 GDIEANIFLRKHRTAEVLLSQCVGIEWDAVDREAMGIEHGMTEEIIHRVIERFN-AKRCP 129
Query: 125 HGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKR-VQDNFQLLKYMEQHHLKIGDELRLLE 183
HG IP + + + + E G ++ R + + ++L Y+ + + G +++++
Sbjct: 130 HGNPIPSPEGYVEKIDDVRITDLNETGDVIISRIIYETDEILNYLYANQILPGAKVKIIR 189
Query: 184 YDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
IEKDG L + ++A I +
Sbjct: 190 T---GFPLQIEKDGRLLSLDPSIAKAIRV 215
>gi|144981|gb|AAA23302.1| diphtheria toxin repressor
Length = 226
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|108799143|ref|YP_639340.1| iron (metal) dependent repressor, DtxR family [Mycobacterium sp.
MCS]
gi|119868258|ref|YP_938210.1| iron dependent repressor [Mycobacterium sp. KMS]
gi|126434751|ref|YP_001070442.1| iron dependent repressor [Mycobacterium sp. JLS]
gi|108769562|gb|ABG08284.1| iron (metal) dependent repressor, DtxR family [Mycobacterium sp.
MCS]
gi|119694347|gb|ABL91420.1| iron dependent repressor [Mycobacterium sp. KMS]
gi|126234551|gb|ABN97951.1| iron dependent repressor [Mycobacterium sp. JLS]
Length = 230
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMERDGLLQVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S+ RL + L+ P P
Sbjct: 69 RALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVQVLDNPTTSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQ 159
G IP G++E+G+ L R +
Sbjct: 129 GNPIP---------------GLSELGLDSLSRAE 147
>gi|10334814|gb|AAG16749.1|AF277002_1 iron dependent regulatory protein [Rhodococcus equi]
Length = 230
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 11 EMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLQVAGDRHLELTEKG 70
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + D++H EA EH +S+ RL + L P P+
Sbjct: 71 RNLAVAVMRKHRLAERLLVDIIGLEWDQVHAEACRWEHVMSEDVERRLVEVLKNPTTSPY 130
Query: 126 GGTIP 130
G IP
Sbjct: 131 GNPIP 135
>gi|124027060|ref|YP_001012380.1| predicted Iron dependent repressor [Hyperthermus butylicus DSM
5456]
gi|123977754|gb|ABM80035.1| predicted Iron dependent repressor [Hyperthermus butylicus DSM
5456]
Length = 238
Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDYL IY+L E IA+++ V VS+++ KL E V+++K G LT G
Sbjct: 26 EDYLVTIYKLEETLGAARTTLIAKELGVKPATVSKILTKLEAEGYVVREKYRGARLTGLG 85
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A + KHR+IE FL +++ H A ++EH + D ++R+ + L P CP
Sbjct: 86 RRIAERIIWKHRVIERFLHDYVGLDPLRAHRYAHMMEH-LPDEIIDRIYERLGRPGTCPM 144
Query: 126 GGTIPQHGQP 135
G IP P
Sbjct: 145 GNPIPGAKVP 154
>gi|120403440|ref|YP_953269.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1]
gi|119956258|gb|ABM13263.1| iron dependent repressor [Mycobacterium vanbaalenii PYR-1]
Length = 229
Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT+KG
Sbjct: 9 EMYLRTIYDLEEEGVIPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDRHLELTEKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S RL + LN P P
Sbjct: 69 RALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSVDVERRLVQVLNNPTTSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYME 169
G IP G++E+GV + + F +++ E
Sbjct: 129 GNPIP---------------GLSELGVG--DEINETFSMVRLTE 155
>gi|118468273|ref|YP_887081.1| iron-dependent repressor IdeR [Mycobacterium smegmatis str. MC2
155]
gi|118169560|gb|ABK70456.1| iron-dependent repressor IdeR [Mycobacterium smegmatis str. MC2
155]
Length = 230
Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT KG
Sbjct: 9 EMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDRHLELTDKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +++H EA EH +S+ RL + L+ P P
Sbjct: 69 RALAVAVMRKHRLAERLLVDVIGLPWEDVHAEACRWEHVMSEEVERRLVQVLDNPTTSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGV 152
G IP G+TE+GV
Sbjct: 129 GNPIP---------------GLTELGV 140
>gi|118194728|gb|ABK77646.1| Mn-dependent transcriptional regulator [Cenarchaeum symbiosum A]
Length = 148
Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YLK I+ + ER+E + IA+ ++V P+V +M+KKL LV K AG LT++G
Sbjct: 19 EMYLKAIWHIKERNEDVKIISIAKMLNVRQPSVVQMLKKLHQRKLVHYSK-AGVYLTEEG 77
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEV-LEHTVSDVFVERLDKFLNYPKVCP 124
+ +++ R RL+EV + + L EI+EE +EH ++ F + L L +P+ CP
Sbjct: 78 SGIGNTMMRNSRLLEVLMDSALKI---EINEEMVCGVEHHMNTQFSDALCTMLGHPRKCP 134
Query: 125 HGGTIP 130
HG IP
Sbjct: 135 HGLEIP 140
>gi|16975074|pdb|1G3Y|A Chain A, Arg80ala Dtxr
Length = 226
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKH L E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKHALAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|49258436|pdb|1P92|A Chain A, Crystal Structure Of (H79a)dtxr
Length = 226
Score = 70.1 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RK RL E L + + +++H+EA EH +SD RL K L P
Sbjct: 69 RTLATAVMRKARLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKG--VTEMGVYLLKRVQ-----DNFQL----LKYMEQHHLK 174
G IP + V G V + + ++V+ + FQ+ + ++
Sbjct: 129 GNPIPGLDELGVGNSDAAAPGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+G E+ +++ D G T+ +G+ +++ +A I IE+
Sbjct: 189 VGSEVEIVDRD---GHITLSHNGKDVELLDDLAHTIRIEE 225
>gi|145224530|ref|YP_001135208.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK]
gi|145217016|gb|ABP46420.1| iron dependent repressor [Mycobacterium gilvum PYR-GCK]
Length = 229
Score = 70.1 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 65/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT KG
Sbjct: 9 EMYLRTIYDLEEECVIPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDRHLELTDKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +E+H EA EH +S RL + LN P P
Sbjct: 69 RALAVAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSVDVERRLVQVLNNPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|899422|emb|CAA90388.1| iron repressor [Streptomyces pilosus]
Length = 231
Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 67/125 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E +IAE++ S P VS+ V ++ + LV LT++G
Sbjct: 9 EMYLRTILELEEEGVVPMRARIAERLDQSGPTVSQTVARMERDGLVSVAPDRHLELTEEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+ + RKHRL E L++ + +++H EA EH +S+ R+ + L +P P+
Sbjct: 69 RRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRVLELLRHPTESPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|70605960|ref|YP_254830.1| iron dependent repressor [Sulfolobus acidocaldarius DSM 639]
gi|68566608|gb|AAY79537.1| iron dependent repressor [Sulfolobus acidocaldarius DSM 639]
Length = 214
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E+YLK IYEL E I ++S +S+ + KL L+ +D + LT++G
Sbjct: 9 ENYLKEIYELEEMKGHARVTDIINDFNISPGTISKALSKLEKLGLIKRDNKR-LTLTEEG 67
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A L + HRL E L + L HE A LEH + +E++D LN P CPH
Sbjct: 68 RKIAERLIKSHRLSERLLTDILGIDWIRAHELAHRLEHIWPEDIIEKIDVMLNKPSTCPH 127
Query: 126 GGTIPQHGQPLVERYRTTLKGV--TEMGVYLLKR----VQDNFQLLKYMEQHHLKIGDEL 179
G IP G + GV TE V L + V++ +L + Q H+ G ++
Sbjct: 128 GHPIPGRG--------IKINGVLLTEAEVGKLYKISMIVKEEEWILAMVNQKHIIPGTKI 179
Query: 180 RLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+L D I + ++ + +A+QI +E+
Sbjct: 180 EVLGKDQNITKVKINDRID--EIPNVLATQILVER 212
>gi|116669359|ref|YP_830292.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
gi|116609468|gb|ABK02192.1| iron (metal) dependent repressor, DtxR family [Arthrobacter sp.
FB24]
Length = 231
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E + +IAE++ S P VS+ + ++ + LV+ LT+ G
Sbjct: 9 EMYLRTILELEEENIVALRARIAERLRHSGPTVSQTIGRMERDGLVVVSGDRHLELTETG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+ + RKHRL E L + + +H+EA EH +S+ R+ + L++P V P+
Sbjct: 69 RKRATEVMRKHRLAERLLADVIGLDWAYVHDEACRWEHVMSERVERRIFELLDHPTVSPY 128
Query: 126 GGTIPQ----HGQP---LVERYRTTLKGVTEMGV-------YLLKRVQDNFQLLKYMEQH 171
G IP GQP + L + GV L + +Q +LL +++
Sbjct: 129 GNPIPGLAALGGQPAPAFTDGVVNLLDAMAGYGVDSRVTVSRLAEPIQVEPELLVQLDEG 188
Query: 172 HLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
++ G L L + E +G L++ VA+ +++
Sbjct: 189 GIRPGASLSLERVGEYISVRVPEIEG-ALELPPEVAAHVFV 228
>gi|75765466|pdb|1XCV|A Chain A, Crystal Structure Of (H79ac102d)dtxr Complexed With
Nickel(Ii)
Length = 139
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RK RL E L + + +++H+EA+ EH +SD RL K L P
Sbjct: 69 RTLATAVMRKARLAERLLTDIIGLDINKVHDEADRWEHVMSDEVERRLVKVLKDVSRSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|152967496|ref|YP_001363280.1| iron dependent repressor [Kineococcus radiotolerans SRS30216]
gi|151362013|gb|ABS05016.1| iron dependent repressor [Kineococcus radiotolerans SRS30216]
Length = 244
Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YLK ++EL E +IAE++ S P VS+ V ++ + L+ LT+ G
Sbjct: 26 EMYLKTVFELEEEGIVPMRARIAERLHHSGPTVSQTVARMERDGLLHVGTDRRLELTEAG 85
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A + RKHRL E L + + +HEEA EH VS+ +RL L++P P+
Sbjct: 86 EAKAMRVMRKHRLTERLLTDVIGLEWSLVHEEACRWEHVVSEEVEKRLVAILDHPHSSPY 145
Query: 126 GGTIP 130
G IP
Sbjct: 146 GNPIP 150
>gi|76261248|ref|ZP_00768865.1| Iron dependent repressor [Chloroflexus aurantiacus J-10-fl]
gi|76163865|gb|EAO58028.1| Iron dependent repressor [Chloroflexus aurantiacus J-10-fl]
Length = 231
Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 61/117 (52%)
Query: 14 ELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQILASSLY 73
+L+E DE + Q+ + + + + ++ L LV ++ G LT G +LA L
Sbjct: 30 DLAEHDEPVFADQLVRCLHIEPEQLLQTLQHLFTRQLVTAVERGGLALTANGYLLARHLI 89
Query: 74 RKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIP 130
+HRL+E FL++ + +H EA L VS +F+ER+ + + VCPHG IP
Sbjct: 90 VRHRLLERFLLDVVGVPWIFVHREAARLAPVVSPLFLERVVELTRHATVCPHGNPIP 146
>gi|116751185|ref|YP_847872.1| iron (metal) dependent repressor, DtxR family [Syntrophobacter
fumaroxidans MPOB]
gi|116700249|gb|ABK19437.1| iron (metal) dependent repressor, DtxR family [Syntrophobacter
fumaroxidans MPOB]
Length = 177
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 67/127 (52%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ + EDYL++I+ L + + K IA++MSV +V+ +K L L+ +
Sbjct: 11 LSASLEDYLEVIFHLEQSNRVARAKDIADQMSVQRASVTGALKALAARGLINYSPYSYIT 70
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ +A + +H ++ F + L +A+E A +EH ++ + VERL +FL +
Sbjct: 71 LTTAGRDIARDVIHRHDTLKEFFVTALQLSAEEAEANACRIEHAIAPLAVERLVRFLEFI 130
Query: 121 KVCPHGG 127
CP G
Sbjct: 131 NACPRTG 137
>gi|1171105|gb|AAA86056.1| similar to the Corynebacterium diptheriae diptheria toxin
repressor, Swiss-Prot Accession Number P33120
Length = 233
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IY+L E +IAE++ S P VS+ V ++ + L+ LT KG
Sbjct: 9 EMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMERDGLLHVAGDRHLELTDKG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L++ + +++H EA EH +S+ RL + L P P
Sbjct: 69 RALAVAVMRKHRLAERLLVDVIGLPWEDVHAEACRWEHVMSEEVERRLVQVLENPTTSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|68536174|ref|YP_250879.1| iron-dependent repressor DtxR [Corynebacterium jeikeium K411]
gi|88911293|sp|Q4JV96|DTXR_CORJK Diphtheria toxin repressor (Iron-dependent diphtheria tox
regulatory element) (Tox regulatory factor)
gi|68263773|emb|CAI37261.1| iron-dependent repressor DtxR [Corynebacterium jeikeium K411]
Length = 240
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 68/125 (54%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ ++L+ +K L+ +G
Sbjct: 9 EMYLRTIYELEEEGIPPLRARIAERLDQSGPTVSQTVARMERDELLTVEKDRSLKLSAQG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+++ RKHRL E L + + +++H+EA EH + D +L K L+ P
Sbjct: 69 RALATAVMRKHRLAERLLTDVIGLPWEKVHDEACRWEHVMGDEVEVQLVKVLSEYATSPF 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|145295825|ref|YP_001138646.1| hypothetical protein cgR_1750 [Corynebacterium glutamicum R]
gi|140845745|dbj|BAF54744.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 228
Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV +T +G
Sbjct: 9 EMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEMTPEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L + + ++H+EA EH +SD RL + L+ + P
Sbjct: 69 RSLAIAVMRKHRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVQRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMG-----------VYLLKRVQDNFQLLKYMEQHHLK 174
G IP G+ +++ GV + V L + +Q + + + + ++
Sbjct: 129 GNPIPGLGEIGLDQADEPDSGVRAIDLPLGENLKARIVQLNEILQVDLEQFQALTDAGVE 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
IG E+ ++ G I +G +++ +A + +EK
Sbjct: 189 IGTEVDIINEQ---GRVVITHNGSSVELIDDLAHAVRVEK 225
>gi|88855702|ref|ZP_01130365.1| iron-dependent repressor, DxtR metalloregulatory family protein
[marine actinobacterium PHSC20C1]
gi|88815026|gb|EAR24885.1| iron-dependent repressor, DxtR metalloregulatory family protein
[marine actinobacterium PHSC20C1]
Length = 233
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 15/225 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I +L E + +I+E++ S P VS+ + ++ + LV+ + T++G
Sbjct: 9 EMYLRTILDLEEENIVPLRARISERLGHSGPTVSQTIGRMERDGLVVVEGDRHLEFTEEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+ + RKHRL E L + + +H+EA EH +S+ +L + L++P P+
Sbjct: 69 RRRATHVMRKHRLAERLLADVIGLDWALVHDEACRWEHVMSEQVERKLIEILDHPTESPY 128
Query: 126 GGTIP---QHGQPLVERYRTTLKGVTEMGV-----------YLLKRVQDNFQLLKYMEQH 171
G IP + G + T + + E+ L + VQ +LL+ +
Sbjct: 129 GNPIPGLEELGGIAAPLFSTGMVNIVELVAETTAPVSGHIRRLGEPVQFEPELLQQLFNA 188
Query: 172 HLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKA 216
+ G D++ A T++ GE L++ + VA I++EK A
Sbjct: 189 GVMPGRTAMFSAADSYV-AVTVDGFGEGLELPNEVAVHIFVEKPA 232
>gi|15897577|ref|NP_342182.1| Iron-dependent repressor [Sulfolobus solfataricus P2]
gi|6015807|emb|CAB57634.1| diphtheria toxin repressor [Sulfolobus solfataricus]
gi|13813836|gb|AAK40972.1| Iron-dependent repressor [Sulfolobus solfataricus P2]
Length = 212
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E+YLK +YE+ E ++ ++S +S+ + KL LV + LT++G
Sbjct: 9 ENYLKEMYEIEEIKGSAKVSELISIFNISPGTISKALNKLEKLGLVERTNDRKIKLTEEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A L + HRL E L + + HE A LEH D +ER+D+ L YP CP
Sbjct: 69 KRIAERLIKSHRLSERLLTDIVGVDWIRAHELAHRLEHIWPDDILERIDRLLGYPTTCP- 127
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGVY----LLKRVQDNFQLLKYMEQHHLKIGDELRL 181
HG P+ R + + K ++E+ + ++ V++ +L+ + LK G L +
Sbjct: 128 ------HGHPIGNRIKVSGKKLSEINIAGKYKVVMIVREEEWILREATRLGLKPGVVLEV 181
Query: 182 LEYDAFAGAYTIEKDGEQL-QVTSAVASQIYI 212
+E + G K GE++ +V+ + Q+ +
Sbjct: 182 IENN---GTDIKIKIGEEIEEVSKVIGDQVLV 210
>gi|19553124|ref|NP_601126.1| Mn-dependent transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
gi|62390760|ref|YP_226162.1| IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG [Corynebacterium
glutamicum ATCC 13032]
gi|81847616|sp|Q8NP95|DTXR_CORGL Diphtheria toxin repressor (Iron-dependent diphtheria tox
regulatory element) (Tox regulatory factor)
gi|21324690|dbj|BAB99313.1| Mn-dependent transcriptional regulator [Corynebacterium glutamicum
ATCC 13032]
gi|41326098|emb|CAF20261.1| IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG [Corynebacterium
glutamicum ATCC 13032]
Length = 228
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV +T +G
Sbjct: 9 EMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEMTPEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L + + ++H+EA EH +SD RL + L+ P
Sbjct: 69 RSLAIAVMRKHRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVHRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMG-----------VYLLKRVQDNFQLLKYMEQHHLK 174
G IP G+ +++ GV + V L + +Q + + + + ++
Sbjct: 129 GNPIPGLGEIGLDQADEPDSGVRAIDLPLGENLKARIVQLNEILQVDLEQFQALTDAGVE 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
IG E+ ++ G I +G +++ +A + +EK
Sbjct: 189 IGTEVDIINEQ---GRVVITHNGSSVELIDDLAHAVRVEK 225
>gi|110638426|ref|YP_678635.1| Mn2+/Zn2+ ABC transporter, permease [Cytophaga hutchinsonii ATCC
33406]
gi|110281107|gb|ABG59293.1| Mn2+/Zn2+ ABC transporter, permease [Cytophaga hutchinsonii ATCC
33406]
Length = 428
Score = 67.4 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 5 KEDYLKIIYELSERDEKISN----KQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
KE+ LK +Y+L E++ + + + K ++ V + +L E L+ G+
Sbjct: 299 KENILKALYQLGEQENRFQDTHALSNLLAKRNLPLWQVYPALYRLRFEGY-LQHTGEGWA 357
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G + R HRL E++L +L +D +H++AE +EH ++ RL+K LN+P
Sbjct: 358 LTNEGIERGKRIVRLHRLWEMYLSKNLLLPSDHVHDDAETIEHILTPELESRLEKSLNFP 417
Query: 121 KVCPHGGTIPQ 131
+V PH IP+
Sbjct: 418 EVDPHEKKIPR 428
>gi|154507891|ref|ZP_02043533.1| hypothetical protein ACTODO_00376 [Actinomyces odontolyticus ATCC
17982]
gi|153797525|gb|EDN79945.1| hypothetical protein ACTODO_00376 [Actinomyces odontolyticus ATCC
17982]
Length = 230
Score = 67.0 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDL--VLKDKQAGYLLTK 63
E YLK I EL E +I +++ S P VS+ V ++ + L V+ D++ LT
Sbjct: 14 EMYLKTILELEEDGVTPLRARIVDRLGHSGPTVSQTVARMERDGLLHVMGDRRLE--LTD 71
Query: 64 KGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVC 123
G+ A+ + RKHRL E L++ + ++H+EA EH +SD RL++ L+ V
Sbjct: 72 TGRARATEVLRKHRLAERLLLDVIGMDWAQVHDEACRWEHVMSDAVEARLEELLSNTCVD 131
Query: 124 PHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKR----VQDNFQLLKYMEQHHLKIGDEL 179
P+G +P P E G L R +Q + +LL ++ L+ G +
Sbjct: 132 PYGNPMPGCAPPEGAYSAELAVRSLEAGALTLARIGEPIQADAELLGSFDELGLRPGARV 191
Query: 180 RLLEYDAFAGAYTIEKDGE---QLQVTSAVASQIYI 212
L + +++ GE L + A+A+ +++
Sbjct: 192 GLSAHGDVVRVAALDEAGEVRGYLTIPMALAAHLFV 227
>gi|146304764|ref|YP_001192080.1| FeoA family protein [Metallosphaera sedula DSM 5348]
gi|145703014|gb|ABP96156.1| FeoA family protein [Metallosphaera sedula DSM 5348]
Length = 213
Score = 67.0 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL-LTKK 64
E+YLK IYEL E + + S+S +S+ + +L E L D+++ + LT+
Sbjct: 9 ENYLKEIYELEETKGHAKVVDLIDAFSISPGTISKALDRL--ESLGFIDRKSRRIKLTED 66
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G+ LA L R HRL E L + + HE A LEH + ++++D+ + +PK CP
Sbjct: 67 GKRLAIRLIRSHRLSERLLTDIVGLDWIRAHELAHRLEHIWPEDVLDKIDEVVGHPKTCP 126
Query: 125 HGGTIPQ-----HGQPLVERYRTTLKGVTEMGVY-LLKRVQDNFQLLKYMEQHHLKIGDE 178
HG IP G PL E T+ G Y ++ V++ +L+ + L G
Sbjct: 127 HGHPIPGREDRVEGVPLTE---------TKPGEYTVIMIVKEKEWILRMADSLGLLPGRN 177
Query: 179 LRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
+ +L D G ++ + ++ +V ++A Q+ +
Sbjct: 178 IVVL--DNLNGEVKVQINNKENKVPRSLAEQVIV 209
>gi|116751025|ref|YP_847712.1| iron (metal) dependent repressor, DtxR family [Syntrophobacter
fumaroxidans MPOB]
gi|116700089|gb|ABK19277.1| iron (metal) dependent repressor, DtxR family [Syntrophobacter
fumaroxidans MPOB]
Length = 225
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ + EDYL+ IY L E K IA++M+V +V+ +K L V +
Sbjct: 20 LSASLEDYLQAIYHLQESHRVARVKDIADQMNVQPASVTGALKALANRGFVNYSPYSPIT 79
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT G+ L + R+H +++ F +N L + A ++H + V V+RL FL +
Sbjct: 80 LTAAGRRLGQDIVRRHDILKEFFINTLQLHPQQAEANACRIQHAIDAVAVDRLVHFLEFL 139
Query: 121 KVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDN 161
K+CP RT ++ + +YL K QD+
Sbjct: 140 KLCP----------------RTNMEWLEGFALYLRKGPQDS 164
>gi|25028368|ref|NP_738422.1| diptheria toxin repressor [Corynebacterium efficiens YS-314]
gi|23493653|dbj|BAC18622.1| diptheria toxin repressor [Corynebacterium efficiens YS-314]
Length = 241
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV +T +G
Sbjct: 20 EMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEMTPEG 79
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L + + ++H+EA EH +SD RL + L+ P
Sbjct: 80 RALAIAVMRKHRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVTRSPF 139
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMG-----------VYLLKRVQDNFQLLKYMEQHHLK 174
G IP +++ R G+ + V L + +Q + + + ++
Sbjct: 140 GNPIPGLADIGLDQDREPDSGIRAIDLPHGESLRVRIVQLNEILQVDQEQFSILSSAGIR 199
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
IG E+ ++ G I +G +++ +A + +EK
Sbjct: 200 IGTEVDIINEQ---GRVVITHNGMMVELMDDLAHAVRVEK 236
>gi|10835556|pdb|1F5T|A Chain A, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And Dtxr Consensus Binding Sequence
gi|10835557|pdb|1F5T|B Chain B, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And Dtxr Consensus Binding Sequence
gi|10835558|pdb|1F5T|C Chain C, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And Dtxr Consensus Binding Sequence
gi|10835559|pdb|1F5T|D Chain D, Diphtheria Tox Repressor (C102d Mutant) Complexed With
Nickel And Dtxr Consensus Binding Sequence
Length = 121
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 62/112 (55%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV+ +T G
Sbjct: 9 EMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFL 117
+ LA+++ RKHRL E L + + +++H+EA+ EH +SD RL K L
Sbjct: 69 RTLATAVMRKHRLAERLLTDIIGLDINKVHDEADRWEHVMSDEVERRLVKVL 120
>gi|119961741|ref|YP_946806.1| putative iron-dependent repressor [Arthrobacter aurescens TC1]
gi|119948600|gb|ABM07511.1| putative iron-dependent repressor [Arthrobacter aurescens TC1]
Length = 231
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 65/125 (52%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E + +IAE++ S P VS+ + ++ + LV+ LT+ G
Sbjct: 9 EMYLRTILELEEENIVALRARIAERLRHSGPTVSQTIGRMERDGLVIVSNDRHLELTEVG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A+ + RKHRL E L + + +H+EA EH +S+ RL + L +P P+
Sbjct: 69 RKRATEVMRKHRLAERLLADVIGLDWAYVHDEACRWEHVMSERVERRLYELLEHPTESPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|88911292|sp|Q8FPG6|DTXR_COREF Diphtheria toxin repressor (Iron-dependent diphtheria tox
regulatory element) (Tox regulatory factor)
Length = 230
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV +T +G
Sbjct: 9 EMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEMTPEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ RKHRL E L + + ++H+EA EH +SD RL + L+ P
Sbjct: 69 RALAIAVMRKHRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVTRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMG-----------VYLLKRVQDNFQLLKYMEQHHLK 174
G IP +++ R G+ + V L + +Q + + + ++
Sbjct: 129 GNPIPGLADIGLDQDREPDSGIRAIDLPHGESLRVRIVQLNEILQVDQEQFSILSSAGIR 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
IG E+ ++ G I +G +++ +A + +EK
Sbjct: 189 IGTEVDIINEQ---GRVVITHNGMMVELMDDLAHAVRVEK 225
>gi|119713749|gb|ABL97798.1| iron dependent transcriptional repressor [uncultured marine
bacterium HF10_29C11]
Length = 222
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 5 KEDYLKIIYELSERDE--KISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLT 62
+++YL+ +YE E D ++ +AE++ VS + +EM+++L + + ++ G LT
Sbjct: 9 EDEYLETMYEFYEDDASARVRTGDLAERLGVSPASATEMIQRLSAKGFIDYERYKGAKLT 68
Query: 63 KKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKV 122
KG + + R+HRL EV L++ + + +HE A LEH + D L L P+
Sbjct: 69 AKGLVHGQMMKRRHRLAEV-LLDRFPFDGN-MHETACRLEHAIDDDLEVALTVLLGDPQQ 126
Query: 123 CPHGGTIPQHGQPLVERYR 141
P G IP+ G+ L +R +
Sbjct: 127 DPSGRDIPKSGEHLEQRVK 145
>gi|84498530|ref|ZP_00997300.1| iron-dependent repressor, DxtR metalloregulatory family protein
[Janibacter sp. HTCC2649]
gi|84381273|gb|EAP97157.1| iron-dependent repressor, DxtR metalloregulatory family protein
[Janibacter sp. HTCC2649]
Length = 235
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ ++EL E +IAE++ S P VS+ V ++ + L+ L+ +G
Sbjct: 9 EMYLRTVFELEEEGITPLRARIAERLGHSGPTVSQTVARMERDGLLAVAGDRHIELSTEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+ + RKHR+ E L++ + + +HEEA EH +SD ++ L P+
Sbjct: 69 RRLATRVMRKHRIAERLLVDVIGLEWEYVHEEACRWEHVMSDRVEIKILAMLADHAESPY 128
Query: 126 GGTIP---QHGQPLVERYRTTLKGVTEMG 151
G IP + G+ L E +R L ++E+
Sbjct: 129 GNPIPGLDEFGEALGEDFRLGLSTLSEVA 157
>gi|15678956|ref|NP_276073.1| iron repressor [Methanothermobacter thermautotrophicus str. Delta
H]
gi|2622034|gb|AAB85434.1| iron repressor [Methanothermobacter thermautotrophicus str. Delta
H]
Length = 140
Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T + E+YL+ +Y LS + ++ +M+V +V++M+K+L LV+ G
Sbjct: 12 LTRSMENYLETLYRLSSHG-IVKTSDLSSRMNVRPASVTQMLKRLHEMGLVIYHPYLGAE 70
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
LT +G+ +A + R+H ++E F N L D +EEA ++H + L ++L P
Sbjct: 71 LTDEGREIAEMVLRRHMILECFFHNVLGMDLDSSYEEASRMKHELFRETELALMRYLRNP 130
Query: 121 KVCPHGGTIP 130
CPHG IP
Sbjct: 131 ARCPHGIPIP 140
>gi|34365044|emb|CAD62182.1| mtuR protein [Streptococcus uberis]
Length = 43
Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVK 43
MTPNKEDYLK IYE+ + +KISNKQIAEKM VS PAVSEM+K
Sbjct: 1 MTPNKEDYLKCIYEIGQEKKKISNKQIAEKMQVSPPAVSEMIK 43
>gi|50955348|ref|YP_062636.1| iron-dependent repressor, DxtR metalloregulatory family [Leifsonia
xyli subsp. xyli str. CTCB07]
gi|50951830|gb|AAT89531.1| iron-dependent repressor, DxtR metalloregulatory family [Leifsonia
xyli subsp. xyli str. CTCB07]
Length = 233
Score = 63.5 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I EL E + +I+E++ S P VS+ V ++ + LV+ LT G
Sbjct: 13 EMYLRTILELEEDNIVPLRARISERLGHSGPTVSQTVGRMERDGLVVVSGDRHLELTGDG 72
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A + RKHRL E L + + + +HEEA EH +S+ +L L P P+
Sbjct: 73 RRKAVHVMRKHRLAERLLSDVIELEWEYVHEEACRWEHVMSEQVERKLLTMLGNPTESPY 132
Query: 126 GGTIPQHGQ-------------PLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHH 172
G IP G+ LVE R GVT L + Q + +LL +++
Sbjct: 133 GNPIPGLGELGVAETASTGNLVNLVETVRAADSGVTARIRRLGEPAQVDPELLSQLKKAG 192
Query: 173 LKIGDELRLLEYDAFAGAYTIEKDGEQ--LQVTSAVASQIYIE 213
+ G + A ++ DG + L++ + +A+ I+++
Sbjct: 193 VIPGST---GVFSANGSYVAVQIDGAETGLELPNELAAHIFVD 232
>gi|608593|gb|AAA91345.1| diphtheria toxin repressor
Length = 228
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ IYEL E +IAE++ S P VS+ V ++ + LV +T +G
Sbjct: 9 EMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEMTPEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA ++ R RL E L + + ++H+EA EH +SD RL + L+ P
Sbjct: 69 RSLAIAVMRNDRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVHRSPF 128
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMG-----------VYLLKRVQDNFQLLKYMEQHHLK 174
G IP G+ +++ GV + V L + +Q + + + + ++
Sbjct: 129 GNPIPGLGEIGLDQADEPDSGVRAIDLPLGENLKARIVQLNEILQVDLEQFQALTDAGVE 188
Query: 175 IGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
IG E+ ++ G I +G +++ +A + +EK
Sbjct: 189 IGTEVDIINEQ---GRVVITHNGSSVELIDDLAHAVRVEK 225
>gi|89896513|ref|YP_520000.1| hypothetical protein DSY3767 [Desulfitobacterium hafniense Y51]
gi|109647174|ref|ZP_01371078.1| iron (metal) dependent repressor, DtxR family [Desulfitobacterium
hafniense DCB-2]
gi|89335961|dbj|BAE85556.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|109642420|gb|EAT51974.1| iron (metal) dependent repressor, DtxR family [Desulfitobacterium
hafniense DCB-2]
Length = 125
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T E+YL+ +YELSE+ IAE++SV+ + + + L + L+ +K
Sbjct: 4 LTFTMENYLEAVYELSEKGSGARLSDIAERLSVTKASTNRAMATLSEKGLITNEKYGEIF 63
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFL-NY 119
LT +G+ LA KHR++E F L AD +A +EH +S+ ++ ++KFL NY
Sbjct: 64 LTPEGRKLAKLTSNKHRILEKFFTQVLKLNADTAGVDACAIEHVISNDSIQAMEKFLRNY 123
>gi|21222420|ref|NP_628199.1| iron dependent repressor [Streptomyces coelicolor A3(2)]
gi|12666515|emb|CAC28071.1| DmdR2 protein [Streptomyces coelicolor A3(2)]
gi|13122181|emb|CAC32357.1| iron dependent repressor [Streptomyces coelicolor A3(2)]
Length = 238
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ + EL E +IAE + S P VS+ V ++ + L+ LT G
Sbjct: 9 EMYLRTVLELEEEGVVPLRARIAEHLDQSGPTVSQTVARMERDGLLRIAADRHLELTDTG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ LA+ + RKHRL E L++ + +++H EA EH +S+ RL + L +P P+
Sbjct: 69 RRLATRVMRKHRLAECLLVDVIGLEWEQVHAEACRWEHVMSEAVERRLLRLLRHPTESPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|16752695|ref|NP_444962.1| ABC transporter, permease protein, putative [Chlamydophila
pneumoniae AR39]
gi|33241687|ref|NP_876628.1| putative integral membrane protein [Chlamydophila pneumoniae
TW-183]
gi|7189337|gb|AAF38257.1| ABC transporter, permease protein, putative [Chlamydophila
pneumoniae AR39]
gi|33236196|gb|AAP98285.1| putative integral membrane protein [Chlamydophila pneumoniae
TW-183]
Length = 451
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 52 LKDKQAGYLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVE 111
+K +Q Y LTKKG+ A L R HRL E +L+N L+++ + +HE AE +EH +++
Sbjct: 367 VKKEQDYYRLTKKGRSEALRLVRAHRLWESYLVNSLDFSKESVHELAEEIEHVLTEELDH 426
Query: 112 RLDKFLNYPKVCPHGGTIP 130
L + LN P PH IP
Sbjct: 427 TLTEILNDPCYDPHRQIIP 445
>gi|15618262|ref|NP_224547.1| Integral Membrane Protein [Chlamydophila pneumoniae CWL029]
gi|15835880|ref|NP_300404.1| integral membrane protein [Chlamydophila pneumoniae J138]
gi|14195422|sp|Q9Z8J6|Y347_CHLPN Probable metal transport system membrane protein
CPn_0347/CP_0413/CPj0347/CpB0354
gi|4376622|gb|AAD18491.1| Integral Membrane Protein [Chlamydophila pneumoniae CWL029]
gi|8978719|dbj|BAA98555.1| integral membrane protein [Chlamydophila pneumoniae J138]
Length = 448
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 52 LKDKQAGYLLTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVE 111
+K +Q Y LTKKG+ A L R HRL E +L+N L+++ + +HE AE +EH +++
Sbjct: 364 VKKEQDYYRLTKKGRSEALRLVRAHRLWESYLVNSLDFSKESVHELAEEIEHVLTEELDH 423
Query: 112 RLDKFLNYPKVCPHGGTIP 130
L + LN P PH IP
Sbjct: 424 TLTEILNDPCYDPHRQIIP 442
>gi|118444274|ref|YP_878382.1| iron-dependent transcriptional repressor [Clostridium novyi NT]
gi|118134730|gb|ABK61774.1| iron-dependent transcriptional repressor [Clostridium novyi NT]
Length = 139
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+TP+ EDYL++IY LS++ +A +++ P+ ++MV+KL L+ +K +
Sbjct: 8 LTPSMEDYLEMIYRLSKKSGFTRINDLASSLNIQPPSATKMVQKLSKLGLINYEKYGVIV 67
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
L +G+ + ++L ++H++IE FL + ++ I EE E +EHT++ ++ ++ L++
Sbjct: 68 LKDEGKRIGNALLKRHKIIENFL-TLIGVSSSGILEETEKIEHTINPETLKCINNLLSF 125
>gi|23099355|ref|NP_692821.1| manganese transport transcriptional regulator [Oceanobacillus
iheyensis HTE831]
gi|38604874|sp|Q8EQ23|MNTR_OCEIH Transcriptional regulator mntR (Manganese transport regulator)
gi|22777584|dbj|BAC13856.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
Length = 147
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
TP+ EDY++IIY L E IAE + V +V++MV+KL + + +K G++L
Sbjct: 3 TPSMEDYIEIIYNLIESKGYARVSAIAEALDVHPSSVTKMVQKLDKDQYLDYEKYRGFVL 62
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
T KG+ + L +H L+E FL + + I+++ E +EH +S ++R+ +NY K
Sbjct: 63 TSKGKKIGERLVFRHELLEEFL-EIIGVNDENIYDDVEGIEHHLSWNSIDRIGDLVNYFK 121
>gi|126180428|ref|YP_001048393.1| iron dependent repressor [Methanoculleus marisnigri JR1]
gi|125863222|gb|ABN58411.1| iron dependent repressor [Methanoculleus marisnigri JR1]
Length = 140
Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E+Y++II L ++ + +IAE + V P+V+EM++KL E L++ + AG LT G
Sbjct: 7 EEYIEIICLLERQEGRAQTGRIAEAIDVKPPSVTEMLRKLEQEGLIVYESYAGATLTPAG 66
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A L R+HR L+ L + +A EH VS +ERL FL + P
Sbjct: 67 EEMARDLQRRHRTF-ADLLELLGVEGETAETDACQFEHHVSPETLERLRLFLEFLSESPD 125
Query: 126 G 126
G
Sbjct: 126 G 126
>gi|14590990|ref|NP_143065.1| hypothetical protein PH1163 [Pyrococcus horikoshii OT3]
gi|3257580|dbj|BAA30263.1| 148aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 148
Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ +E+YL+++Y L + I K IA+ + V P+V + +KKL + LV +K
Sbjct: 2 VSKREEEYLEVMYLLQKNKGVIRVKDIAKILKVKPPSVVDALKKLSKKGLVEYEKHDRIT 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY- 119
LT++G+ +A Y KH L+ F N L + E+A EH VS+V V+R+ +F+ Y
Sbjct: 62 LTEEGRKIAEETYSKHILLTEFFTNVLGIPPEIAEEDACQFEHYVSEVTVKRIREFITYI 121
Query: 120 PKVCPH 125
+ CP+
Sbjct: 122 QENCPY 127
>gi|15615370|ref|NP_243673.1| manganese transport transcriptional regulator [Bacillus halodurans
C-125]
gi|20455069|sp|Q9K943|MNTR_BACHD Transcriptional regulator mntR (Manganese transport regulator)
gi|10175428|dbj|BAB06526.1| transcriptional regulator [Bacillus halodurans C-125]
Length = 139
Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
TP+ EDYL+ IY L E IAE + V +V++MV+KL D ++ ++ G +L
Sbjct: 3 TPSMEDYLERIYLLIEEKGYARVSDIAEALEVHPSSVTKMVQKLDKSDYLVYERYRGLIL 62
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
T KG+ + L +H L+E FL + +D I+E+ E +EH +S ++R+ + Y
Sbjct: 63 TAKGKKIGKRLVYRHDLLEDFL-KMIGVDSDHIYEDVEGIEHHLSWDAIDRIGDLVQY 119
>gi|148273651|ref|YP_001223212.1| putative iron-dependent repressor [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831581|emb|CAN02549.1| putative iron-dependent repressor [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 232
Score = 60.5 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E YL+ I +L E +I+E++ S P VS+ V ++ + LV+ LT +G
Sbjct: 9 EMYLRTILDLEEEAIVPLRARISERLGHSGPTVSQTVARMERDGLVIVSGDRHLELTPEG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ A + RKHRL E L + + + +H+EA EH +S+ ++ L +P P+
Sbjct: 69 RSKAVHVMRKHRLAERLLSDVIGLEWEFVHDEACRWEHVMSEQVERKILDLLGHPTESPY 128
Query: 126 GGTIP 130
G IP
Sbjct: 129 GNPIP 133
>gi|147678275|ref|YP_001212490.1| Mn-dependent transcriptional regulator [Pelotomaculum
thermopropionicum SI]
gi|146274372|dbj|BAF60121.1| Mn-dependent transcriptional regulator [Pelotomaculum
thermopropionicum SI]
Length = 156
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T + EDYL++IY LS+ +A ++V P+ ++MV+KL V ++ L
Sbjct: 19 LTASMEDYLEMIYRLSKDTGFTRINDLAAALNVQPPSATKMVQKLAEAGYVNYERYGIIL 78
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L+K G+ +L +HR++E FL +L ++EI EE E +EHT+ + L F+N+
Sbjct: 79 LSKNGEKRGRTLLERHRVVEDFL--NLLGISEEILEETEKIEHTIGARTLNCLADFVNFF 136
Query: 121 KVCP 124
K P
Sbjct: 137 KDRP 140
>gi|148378317|ref|YP_001252858.1| iron dependent repressor [Clostridium botulinum A str. ATCC 3502]
gi|153933396|ref|YP_001382717.1| putative iron-dependent repressor [Clostridium botulinum A str.
ATCC 19397]
gi|153935919|ref|YP_001386268.1| putative iron-dependent repressor [Clostridium botulinum A str.
Hall]
gi|148287801|emb|CAL81867.1| putative iron dependent repressor [Clostridium botulinum A str.
ATCC 3502]
gi|152929440|gb|ABS34940.1| putative iron-dependent repressor [Clostridium botulinum A str.
ATCC 19397]
gi|152931833|gb|ABS37332.1| putative iron-dependent repressor [Clostridium botulinum A str.
Hall]
Length = 126
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 61/113 (53%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E+YL+ IYELSE + +IAEK+ V+ + + + L + L+ +K LT G
Sbjct: 9 ENYLEAIYELSEESNGVKMTRIAEKLGVTKASTNSAMVTLAEKGLITNEKYKKIFLTPLG 68
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
+A Y+KH +I+ FL+ LN + E+A +EH +S V + KFL+
Sbjct: 69 LKIARFTYKKHHIIKDFLIKTLNIDSSIADEDACAIEHVISSDSVYAMQKFLS 121
>gi|14521277|ref|NP_126752.1| iron-dependent repressor [Pyrococcus abyssi GE5]
gi|5458495|emb|CAB49983.1| Iron dependent repressor [Pyrococcus abyssi GE5]
Length = 163
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++ +E+YL+++Y L + I K IA + V P+V + +KKL + L+ +K
Sbjct: 2 VSKREEEYLEVMYLLQKNKGVIRVKDIARVLKVKPPSVVDALKKLSKKGLIEYEKYDRIT 61
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY- 119
LT++G+ +A Y KH L+ F +N L + E+A EH VS+V V+R+ +F++Y
Sbjct: 62 LTEEGKRIAEETYSKHVLLTEFFVNVLGIPPEIAEEDACQFEHYVSEVTVQRIREFISYI 121
Query: 120 PKVCPH 125
+ CP+
Sbjct: 122 QEHCPY 127
>gi|150015165|ref|YP_001307419.1| iron dependent repressor [Clostridium beijerinckii NCIMB 8052]
gi|149901630|gb|ABR32463.1| iron dependent repressor [Clostridium beijerinckii NCIMB 8052]
Length = 131
Score = 60.1 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 64/118 (54%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++P+KE+YLK IY+LSE+ + + + +A + S P+++ V L LV+K
Sbjct: 12 LSPSKEEYLKAIYKLSEKTQSVRSIDLAAYLGFSKPSINNAVAILQEAGLVVKPLGGEIQ 71
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
LT +G+ + K +LI+ FL+ + N E+A +EH +SD L K+LN
Sbjct: 72 LTDEGRKQGQIITTKFQLIKQFLIAYCNVNEQTASEDACKMEHIISDEATFALKKYLN 129
>gi|58581829|ref|YP_200845.1| iron dependent repressor [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58426423|gb|AAW75460.1| iron dependent repressor [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 183
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY+++I +L + IA ++ V+ P V++M+K+L+ + V++ G LT G
Sbjct: 65 EDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDGWVIQRPYRGVFLTPAG 124
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
+ LA+S ++H+++E FL+ L +AE +EH VS+ V FL+
Sbjct: 125 EALAASSRQRHQIVERFLLA-LGIDEATARRDAEGIEHHVSEATVAAFAAFLD 176
>gi|57233538|ref|YP_180848.1| iron dependent repressor, putative [Dehalococcoides ethenogenes
195]
gi|57223986|gb|AAW39043.1| iron dependent repressor, putative [Dehalococcoides ethenogenes
195]
Length = 238
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 26/237 (10%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+TP +DYL+ + LSE +I IA K+S++ V++ ++ L LVL++K
Sbjct: 7 ITPAMQDYLETMLSLSESVNEIRVTDIAAKLSIAKATVTQGIEYLKKHGLVLQEKYGPVE 66
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFL--- 117
LT G+ +A + +HR ++ FL L+ A ++A ++EH VS + RL FL
Sbjct: 67 LTASGKAMAVEVRWRHRKLKQFLTEVLSVDAKIAEKDACLMEHVVSKHTMNRLMHFLEST 126
Query: 118 ------------------NYPKVCPHGGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQ 159
N +V + T P +P+ R LK V E G + R+
Sbjct: 127 DCMNCAKNVSQKHTPAINNLSRVQSNKETNPMETKPI--RALNELK-VGERGRVI--RIA 181
Query: 160 DNFQLLKYMEQHHLKIGDELRLLEYDAFAGAYTIEKDGEQLQVTSAVASQIYIEKKA 216
+ L + + G E+++ + ++ G L + A+QIY+E A
Sbjct: 182 SDKALKSRVLDMGVTPGAEIKMEGHAPMGDPVEVDVKGYHLTLRKDEAAQIYVEVGA 238
>gi|84503197|ref|ZP_01001282.1| hypothetical protein OB2597_16582 [Oceanicola batsensis HTCC2597]
gi|114762612|ref|ZP_01442056.1| hypothetical protein R2601_07168 [Roseovarius sp. HTCC2601]
gi|84388438|gb|EAQ01387.1| hypothetical protein OB2597_16582 [Oceanicola batsensis HTCC2597]
gi|114544867|gb|EAU47872.1| hypothetical protein R2601_07168 [Roseovarius sp. HTCC2601]
Length = 116
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY+++I EL E + +IAE++ V P V++ + +L LV ++ LT G
Sbjct: 3 EDYVELIAELIETRGEARPVEIAERLGVKPPTVTKNISRLKAAGLVRREPYRAIFLTDAG 62
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
Q LA R+HR++ FL++ L + +AE +EH VS +E ++ LN
Sbjct: 63 QDLAEICRRRHRVVVAFLLS-LGIDEETAERDAEGIEHHVSGTTLEAFERRLN 114
>gi|15895874|ref|NP_349223.1| Predicted iron-dependent transcription repressor [Clostridium
acetobutylicum ATCC 824]
gi|15025641|gb|AAK80563.1|AE007759_1 Predicted iron-dependent transcription repressor [Clostridium
acetobutylicum ATCC 824]
Length = 157
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
++P+ EDY+++IY LS + +A ++V P+V++M+ KL L+ +K +
Sbjct: 20 LSPSGEDYMEMIYRLSMKTGFTRVNNLASALNVQPPSVTKMLHKLANLKLIKYEKYGVIM 79
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFV----ERLDKF 116
L K G L SL +H +IE FL L D + EE E +EHT++ + + +D F
Sbjct: 80 LEKAGTELGKSLLNRHNIIEQFL--KLLSINDGVLEETEKIEHTINAEILCGMNDLVDFF 137
Query: 117 LNYP 120
YP
Sbjct: 138 AAYP 141
>gi|15922357|ref|NP_378026.1| hypothetical diphtheria toxin repressor [Sulfolobus tokodaii str.
7]
gi|15623146|dbj|BAB67135.1| 211aa long hypothetical diphtheria toxin repressor [Sulfolobus
tokodaii str. 7]
Length = 211
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
E+YLK IYE+ + +VS VS+ ++KL L+ +D + LT +G
Sbjct: 8 ENYLKEIYEIELLKGYARVSDLILAFNVSPGTVSKALEKLEKIGLIERDNKK-IKLTAEG 66
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPH 125
+ +A L R HRL E L + + H+ A LEH + V+++D+ L P CPH
Sbjct: 67 KKIAEKLIRAHRLSERLLTDIIGLDWIRAHQLAHRLEHIWPEDVVDKIDELLGKPLTCPH 126
Query: 126 GGTIPQHGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELRLLEYD 185
G IP + + + + V ++ R ++ +L ++ ++K G E++L++ +
Sbjct: 127 GHPIPGREVKVNGIKLSEAECNKKYKVIMIIREEE--WILSMADELNIKPGVEIKLIKKN 184
Query: 186 AFAGAYTIEKDGEQLQVTSAVASQIYIEK 214
+ IE D ++ + A+A ++ + +
Sbjct: 185 --ENDFVIEIDNKKESIPKALAEEVLVSE 211
>gi|87310377|ref|ZP_01092507.1| hypothetical protein DSM3645_29801 [Blastopirellula marina DSM
3645]
gi|87286876|gb|EAQ78780.1| hypothetical protein DSM3645_29801 [Blastopirellula marina DSM
3645]
Length = 513
Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 18 RDEKISNKQIAEKMSVSA-PAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQILASSLYRKH 76
RDE + + + V A PAV V + ++ +L G++LT+ G A L R H
Sbjct: 312 RDETHATRFETIRAHVQATPAVLRRVLRRMVAMSLLNQTPHGFILTESGNHEARRLMRAH 371
Query: 77 RLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGGTIPQ 131
R+ E +L + D +H+ A +LEH + V+ LD L +P PHG IP+
Sbjct: 372 RIWETYL-QRVGMPEDSLHDRAHLLEHLNDEATVDYLDDRLGHPTRDPHGQEIPE 425
>gi|57640042|ref|YP_182520.1| manganese-dependent transcription regulator [Thermococcus
kodakarensis KOD1]
gi|57158366|dbj|BAD84296.1| manganese-dependent transcription regulator [Thermococcus
kodakarensis KOD1]
Length = 147
Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T +E+YL+ +Y L + I K IA+ ++V P+V + +KKL + L+ +K L
Sbjct: 3 VTKREEEYLETMYILHKNKGVIRVKDIAKALNVRPPSVVDALKKLAEKGLIEYEKYDRIL 62
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY- 119
LT+KG+ +A + Y KH + F + L + ++A EH VS++ V+R+ +F +
Sbjct: 63 LTEKGREIAENTYSKHVFLTKFFTDILGIPPEIAEQDACQFEHYVSEITVKRMREFAEFI 122
Query: 120 PKVCPH 125
+ CP+
Sbjct: 123 QEQCPY 128
>gi|84686763|ref|ZP_01014650.1| hypothetical protein RB2654_22338 [Rhodobacterales bacterium
HTCC2654]
gi|118738364|ref|ZP_01586539.1| iron (metal) dependent repressor, DtxR family [Dinoroseobacter
shibae DFL 12]
gi|84665194|gb|EAQ11673.1| hypothetical protein RB2654_22338 [Rhodobacterales bacterium
HTCC2654]
gi|118672189|gb|EAV78761.1| iron (metal) dependent repressor, DtxR family [Dinoroseobacter
shibae DFL 12]
Length = 152
Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY+++I EL E + +IAE++ V P V++ + +L LV ++ LT G
Sbjct: 39 EDYVELIAELIETRGEARPVEIAERLGVKPPTVTKNISRLKAAGLVRREPYRAIFLTDAG 98
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
Q LA R+HR++ FL++ L + +AE +EH VS +E ++ LN
Sbjct: 99 QDLAEICRRRHRVVVAFLLS-LGIDEETAERDAEGIEHHVSGTTLEAFERRLN 150
>gi|16081924|ref|NP_394331.1| iron-dependent transcription repressor related protein
[Thermoplasma acidophilum DSM 1728]
gi|10640149|emb|CAC12001.1| iron-dependent transcription repressor related protein
[Thermoplasma acidophilum]
Length = 220
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 5 KEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKK 64
+EDYLKII EL + I+ ++V +V + + L+ + K ++ Y LT
Sbjct: 11 EEDYLKIIQELVLYKGYATLADISRSLNVKRQSVRDEINHLISLSMAEKIERGKYRLTPS 70
Query: 65 GQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCP 124
G A+ RKHR E+ L + + + EEA +EH +++ ++R + + CP
Sbjct: 71 GDREANRFLRKHRTAEILLSRCIGIPWERVDEEAMGIEHGMTEEIIQRTIERFGVDR-CP 129
Query: 125 HGGTIPQ---HGQPLVERYRTTLKGVTEMGVYLLKRVQDNFQLLKYMEQHHLKIGDELRL 181
HG IP + +P+ + T+L + + + + V + +L ++ + L G ++++
Sbjct: 130 HGNPIPDPEGNVEPVADVRITSL--LPDSTARISRIVYETDDILHFLALNGLIPGKDIKI 187
Query: 182 LEYDAFAGAYTIEKDGEQLQVTSAVASQIYI 212
++ + DG +++ + +A I +
Sbjct: 188 ---ESVKDTVRVLVDGRSIEIPTDIAMAIMV 215
>gi|149179644|ref|ZP_01858149.1| manganese transport transcriptional regulator [Bacillus sp. SG-1]
gi|148851836|gb|EDL65981.1| manganese transport transcriptional regulator [Bacillus sp. SG-1]
Length = 140
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
TP+ EDY++ IY L + IA+ +SV +V++MV+KL +D ++ +K G +L
Sbjct: 3 TPSMEDYIEQIYLLIDNKGYARVSDIADALSVHPSSVTKMVQKLDKDDYLVYEKYRGLIL 62
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERL 113
T KG + L +H L+E FL N + + I+E+ E +EH +S ++R+
Sbjct: 63 TAKGNKIGKRLVFRHELLEQFL-NIIGVKEENIYEDVEGIEHHLSWDSIDRI 113
>gi|78047754|ref|YP_363929.1| manganese-dependent transcriptional regulator, MarR family
[Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|78036184|emb|CAJ23875.1| manganese-dependent transcriptional regulator, MarR family
[Xanthomonas campestris pv. vesicatoria str. 85-10]
Length = 169
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY+++I +L + IA ++ V+ P V++M+K+L+ + V++ G LT G
Sbjct: 51 EDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDGWVVQRPYRGVFLTPAG 110
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
+ LA+S ++H+++E FL+ L +AE +EH VS+ V FL+
Sbjct: 111 EALAASSRQRHQIVERFLLA-LGIDEATARRDAEGIEHHVSEATVAAFAAFLD 162
>gi|150018881|ref|YP_001311135.1| iron dependent repressor [Clostridium beijerinckii NCIMB 8052]
gi|149905346|gb|ABR36179.1| iron dependent repressor [Clostridium beijerinckii NCIMB 8052]
Length = 156
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 1 MTPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYL 60
+T + EDYL++IY LS + +++ ++V P+ + MV+KL E LV +K +
Sbjct: 20 LTASMEDYLEMIYRLSLNKGYLRINELSNALNVQPPSATRMVQKLSEERLVKYEKYGIII 79
Query: 61 LTKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYP 120
L + G+ L ++L +H +IE FL L+ EI +E E +EHTVS + F+ +
Sbjct: 80 LEESGKKLGAALLNRHHIIENFL-KILDIPDKEILDETEKIEHTVSKETSKCFQDFVQFI 138
Query: 121 KVCP 124
+ P
Sbjct: 139 ESNP 142
>gi|85059528|ref|YP_455230.1| transcriptional regulator [Sodalis glossinidius str. 'morsitans']
gi|84780048|dbj|BAE74825.1| transcriptional regulator [Sodalis glossinidius str. 'morsitans']
Length = 159
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
+DY+++I +L + +A ++ VS P V++M+K+L++ LV + G LT +G
Sbjct: 39 DDYVELIADLIRDCGEARQVDLAARLGVSQPTVAKMLKRLVVAGLVEQQPYRGIFLTAEG 98
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPK 121
+ LA +H+++E FL+ L + + +AE +EH VSD ++ +F + P+
Sbjct: 99 EALAHESRMRHQIVESFLLA-LGVSPETARRDAEGIEHHVSDETLQIFRRFTDNPE 153
>gi|65321590|ref|ZP_00394549.1| COG1321: Mn-dependent transcriptional regulator [Bacillus anthracis
str. A2012]
gi|118479392|ref|YP_896543.1| iron-dependent repressor [Bacillus thuringiensis str. Al Hakam]
gi|118418617|gb|ABK87036.1| iron-dependent repressor [Bacillus thuringiensis str. Al Hakam]
Length = 163
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
TP+ EDY++ IY L + IAE +SV +V++MV+KL ++ ++ +K G +L
Sbjct: 24 TPSMEDYIEQIYLLIDEKGYARVSDIAEALSVHPSSVTKMVQKLDKDEYLIYEKYRGLVL 83
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
T KG+ + L +H L+E F M + +I+ + E +EH +S ++R+ + Y
Sbjct: 84 TSKGKKIGERLVYRHELLEQF-MRIIGVDESKIYNDVEGIEHHLSWEAIDRIGDLVQY 140
>gi|84623732|ref|YP_451104.1| iron dependent repressor [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367672|dbj|BAE68830.1| iron dependent repressor [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 155
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY+++I +L + IA ++ V+ P V++M+K+L+ + V++ G LT G
Sbjct: 37 EDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDGWVIQRPYRGVFLTPAG 96
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
+ LA+S ++H+++E FL+ L +AE +EH VS+ V FL+
Sbjct: 97 EALAASSRQRHQIVERFLLA-LGIDEATARRDAEGIEHHVSEATVAAFAAFLD 148
>gi|21242781|ref|NP_642363.1| iron dependent repressor [Xanthomonas axonopodis pv. citri str.
306]
gi|21108263|gb|AAM36899.1| iron dependent repressor [Xanthomonas axonopodis pv. citri str.
306]
Length = 149
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 6 EDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKG 65
EDY+++I +L + IA ++ V+ P V++M+K+L+ + V++ G LT G
Sbjct: 31 EDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDGWVVQRPYRGVFLTPAG 90
Query: 66 QILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLN 118
+ LA+S ++H+++E FL+ L +AE +EH VS+ V FL+
Sbjct: 91 EALAASSRQRHQIVERFLLA-LGIDEATARRDAEGIEHHVSEATVAAFAAFLD 142
>gi|56420951|ref|YP_148269.1| manganese transport transcriptional regulator [Geobacillus
kaustophilus HTA426]
gi|81346869|sp|Q5KX85|MNTR_GEOKA Transcriptional regulator mntR (Manganese transport regulator)
gi|56380793|dbj|BAD76701.1| transcriptional regulator (manganese transport regulator)
[Geobacillus kaustophilus HTA426]
Length = 141
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
TP+ EDY++ IY L E IAE +SV +V++MV+KL ++ ++ +K G +L
Sbjct: 3 TPSMEDYIEQIYILIEEKGYARVSDIAEALSVHPSSVTKMVQKLDKDEYLVYEKYRGLVL 62
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
T KG+ + L +H L+E FL + + + I+ + E +EH +S ++R+ + Y
Sbjct: 63 TPKGRKIGQRLVYRHELLEQFL-RLIGVSEENIYRDVEGIEHHLSWNAIDRIGDLVQY 119
>gi|62425787|ref|ZP_00380918.1| COG1321: Mn-dependent transcriptional regulator [Brevibacterium
linens BL2]
Length = 219
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 8 YLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLLTKKGQI 67
YLK I EL E+ +IAE++ S P VS+ V ++ + L+ LT +G+
Sbjct: 2 YLKSIIELEEQSIVPLRARIAERLDHSGPTVSQTVARMERDGLLHVSNDRHLELTAEGRR 61
Query: 68 LASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNYPKVCPHGG 127
+A+ + RKHRL E L + + + +H+EA EH +S+ +L L P+G
Sbjct: 62 IATEVMRKHRLAERLLADVVGLEWELVHDEACRWEHVMSEQVERKLVTLLPEIASGPYGN 121
Query: 128 TIP 130
IP
Sbjct: 122 PIP 124
>gi|75761454|ref|ZP_00741421.1| Transcriptional regulator mntR [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491060|gb|EAO54309.1| Transcriptional regulator mntR [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 163
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 2 TPNKEDYLKIIYELSERDEKISNKQIAEKMSVSAPAVSEMVKKLLLEDLVLKDKQAGYLL 61
TP+ EDY++ IY L + IAE +SV +V++MV+KL ++ ++ +K G +L
Sbjct: 24 TPSMEDYIEQIYLLIDEKGYARVSDIAEALSVHPSSVTKMVQKLDKDEYLIYEKYRGLVL 83
Query: 62 TKKGQILASSLYRKHRLIEVFLMNHLNYTADEIHEEAEVLEHTVSDVFVERLDKFLNY 119
T KG+ + L +H L+E F M + +I+ + E +EH +S ++R+ + Y
Sbjct: 84 TTKGKKIGERLVYRHDLLEQF-MRIIGVDEGKIYNDVEGIEHHLSWEAIDRIGDLVEY 140
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.317 0.135 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 760,425,795
Number of Sequences: 5470121
Number of extensions: 30385839
Number of successful extensions: 89609
Number of sequences better than 1.0e-05: 349
Number of HSP's better than 0.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 89227
Number of HSP's gapped (non-prelim): 350
length of query: 217
length of database: 1,894,087,724
effective HSP length: 127
effective length of query: 90
effective length of database: 1,199,382,357
effective search space: 107944412130
effective search space used: 107944412130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 127 (53.5 bits)