BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= TDE1851
(506 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42527357|ref|NP_972455.1| ABC transporter, permease prot... 959 0.0
gi|108760326|ref|YP_630649.1| ABC transporter, permease pro... 89 1e-15
gi|115379701|ref|ZP_01466779.1| efflux ABC transporter, per... 86 6e-15
gi|153003369|ref|YP_001377694.1| protein of unknown functio... 78 1e-12
gi|124008067|ref|ZP_01692766.1| efflux ABC transporter, per... 77 2e-12
gi|126178445|ref|YP_001046410.1| protein of unknown functio... 76 4e-12
gi|87122130|ref|ZP_01078014.1| hypothetical protein MED121_... 76 5e-12
gi|115376589|ref|ZP_01463820.1| ABC transporter, permease p... 76 5e-12
gi|121634344|ref|YP_974589.1| putative ABC transporter ATP-... 73 5e-11
gi|15793705|ref|NP_283527.1| ABC transporter ATP-binding pr... 73 6e-11
gi|15676455|ref|NP_273594.1| ABC transporter, ATP-binding p... 73 6e-11
gi|108758874|ref|YP_630648.1| hypothetical protein MXAN_242... 72 1e-10
gi|59801781|ref|YP_208493.1| putative ABC transporter, ATP-... 70 4e-10
gi|75350657|sp|Q5MK06|MACB_NEIGO Macrolide export ATP-bindi... 70 4e-10
gi|86160354|ref|YP_467139.1| protein of unknown function DU... 69 6e-10
gi|153815064|ref|ZP_01967732.1| hypothetical protein RUMTOR... 69 6e-10
gi|76818324|ref|YP_336629.1| putative permease [Burkholderi... 69 6e-10
gi|15669701|ref|NP_248514.1| hypothetical protein MJ1507 [M... 68 1e-09
gi|126442800|ref|YP_001064248.1| efflux ABC transporter, pe... 68 1e-09
gi|83717341|ref|YP_440531.1| ABC transporter, permease prot... 68 2e-09
gi|82534412|ref|ZP_00893447.1| hypothetical protein Bpse110... 68 2e-09
gi|134281899|ref|ZP_01768606.1| efflux ABC transporter, per... 68 2e-09
gi|53723341|ref|YP_112326.1| permease [Burkholderia pseudom... 67 2e-09
gi|99908520|ref|ZP_01316203.1| hypothetical protein Bpse1_0... 67 2e-09
gi|100059925|ref|ZP_01322056.1| hypothetical protein BpseP_... 67 2e-09
gi|53715894|ref|YP_106592.1| putative ABC transporter, perm... 67 2e-09
gi|115379702|ref|ZP_01466780.1| efflux ABC transporter, per... 67 2e-09
gi|57242035|ref|ZP_00369975.1| conserved hypothetical integ... 67 3e-09
gi|67156832|ref|ZP_00418329.1| Protein of unknown function ... 67 3e-09
gi|94267998|ref|ZP_01291055.1| Protein of unknown function ... 67 4e-09
gi|16080093|ref|NP_390919.1| hypothetical protein BSU30410 ... 67 4e-09
gi|108757413|ref|YP_634527.1| putative ABC transporter, per... 66 6e-09
gi|119896348|ref|YP_931561.1| hypothetical protein azo0056 ... 66 6e-09
gi|122064312|sp|Q2KVS6|MACB_BORA1 Macrolide export ATP-bind... 66 6e-09
gi|115423873|emb|CAJ50424.1| putative macrolide-specific AB... 66 6e-09
gi|15641884|ref|NP_231516.1| hypothetical protein VC1882 [V... 66 6e-09
gi|153856020|ref|ZP_01996933.1| hypothetical protein DORLON... 65 7e-09
gi|15896818|ref|NP_350167.1| Predicted permease [Clostridiu... 65 7e-09
gi|121609498|ref|YP_997305.1| protein of unknown function D... 65 8e-09
gi|56962482|ref|YP_174208.1| antimicrobial peptide ABC tran... 65 8e-09
gi|154148848|ref|YP_001406500.1| lipoprotein release system... 65 1e-08
gi|118075120|ref|ZP_01543262.1| protein of unknown function... 65 1e-08
gi|115376580|ref|ZP_01463811.1| efflux ABC transporter, per... 65 1e-08
gi|20090527|ref|NP_616602.1| hypothetical protein MA1674 [M... 65 1e-08
gi|41614969|ref|NP_963467.1| hypothetical protein NEQ175 [N... 65 1e-08
gi|118474523|ref|YP_891767.1| permease, putative [Campyloba... 65 2e-08
gi|57240551|ref|ZP_00368500.1| conserved hypothetical integ... 64 2e-08
gi|154174987|ref|YP_001408405.1| PglC [Campylobacter curvus... 64 2e-08
gi|66045854|ref|YP_235695.1| ABC transporter:Protein of unk... 64 2e-08
gi|46143385|ref|ZP_00135343.2| COG0577: ABC-type antimicrob... 64 2e-08
gi|148653631|ref|YP_001280724.1| ABC transporter related [P... 64 2e-08
gi|94971657|ref|YP_593705.1| ABC efflux pump, inner membran... 64 2e-08
gi|28900079|ref|NP_799734.1| putative ABC transporter, ATP-... 64 2e-08
gi|21228952|ref|NP_634874.1| ABC transporter, permease prot... 64 2e-08
gi|153837027|ref|ZP_01989694.1| macrolide-specific ABC-type... 64 2e-08
gi|39995783|ref|NP_951734.1| ABC transporter, permease prot... 64 2e-08
gi|83644121|ref|YP_432556.1| ABC-type antimicrobial peptide... 64 3e-08
gi|84386594|ref|ZP_00989620.1| putative ABC transporter, in... 64 3e-08
gi|86146941|ref|ZP_01065259.1| hypothetical protein MED222_... 64 3e-08
gi|91224239|ref|ZP_01259502.1| putative ABC transporter, AT... 64 3e-08
gi|154490311|ref|ZP_02030572.1| hypothetical protein PARMER... 64 3e-08
gi|154687162|ref|YP_001422323.1| YtrF [Bacillus amyloliquef... 64 3e-08
gi|24373810|ref|NP_717853.1| lipoprotein releasing system t... 63 4e-08
gi|28897753|ref|NP_797358.1| hypothetical protein VP0979 [V... 63 5e-08
gi|120434567|ref|YP_860260.1| FtsX family membrane protein ... 63 5e-08
gi|45358197|ref|NP_987754.1| hypothetical protein MMP0634 [... 63 5e-08
gi|40062675|gb|AAR37588.1| permease, putative [uncultured b... 63 6e-08
gi|154496631|ref|ZP_02035327.1| hypothetical protein BACCAP... 63 6e-08
gi|154503119|ref|ZP_02040179.1| hypothetical protein RUMGNA... 62 6e-08
gi|116625537|ref|YP_827693.1| protein of unknown function D... 62 7e-08
gi|116186116|ref|ZP_01476015.1| hypothetical protein VEx2w_... 62 7e-08
gi|118732222|ref|ZP_01580736.1| ABC transporter related [De... 62 7e-08
gi|20091991|ref|NP_618066.1| ABC transporter, permease prot... 62 7e-08
gi|156867699|gb|EDO61071.1| hypothetical protein CLOLEP_026... 62 8e-08
gi|82703624|ref|YP_413190.1| Lipoprotein releasing system, ... 62 8e-08
gi|118717535|ref|ZP_01570070.1| protein of unknown function... 62 9e-08
gi|117619856|ref|YP_855302.1| macrolide-specific ABC-type e... 62 9e-08
gi|152979011|ref|YP_001344640.1| ABC transporter related [A... 62 1e-07
gi|134094169|ref|YP_001099244.1| macrolide transport protei... 62 1e-07
gi|126178017|ref|YP_001045982.1| protein of unknown functio... 62 1e-07
gi|148980816|ref|ZP_01816226.1| outer membrane-specific lip... 62 1e-07
gi|62391391|ref|YP_226793.1| ABC-type transport system, inv... 62 1e-07
gi|23308948|ref|NP_601752.2| ABC-type transporter, permease... 62 1e-07
gi|153835242|ref|ZP_01987909.1| lipoprotein releasing syste... 62 1e-07
gi|150009938|ref|YP_001304681.1| ABC transporter permease p... 62 1e-07
gi|121609486|ref|YP_997293.1| protein of unknown function D... 62 1e-07
gi|156973822|ref|YP_001444729.1| hypothetical protein VIBHA... 62 1e-07
gi|34763698|ref|ZP_00144622.1| EXPORT ABC TRANSPORTER PERME... 61 1e-07
gi|94969853|ref|YP_591901.1| ABC efflux pump, inner membran... 61 1e-07
gi|16119402|ref|NP_396108.1| hypothetical protein AGR_pAT_2... 61 2e-07
gi|68055620|ref|ZP_00539763.1| Protein of unknown function ... 61 2e-07
gi|154148879|ref|YP_001406639.1| macrolide export ATP-bindi... 61 2e-07
gi|89893282|ref|YP_516769.1| hypothetical protein DSY0536 [... 61 2e-07
gi|38234455|ref|NP_940222.1| Putative ABC transport system ... 61 2e-07
gi|85860097|ref|YP_462299.1| lipoprotein releasing system, ... 61 2e-07
gi|4098079|gb|AAD09219.1| ABC transporter membrane protein ... 61 2e-07
gi|56414005|ref|YP_151080.1| conserved hypothetical ABC tra... 61 2e-07
gi|88800941|ref|ZP_01116493.1| hypothetical protein MED297_... 61 2e-07
gi|144899843|emb|CAM76707.1| Lipoprotein releasing system, ... 61 2e-07
gi|70729518|ref|YP_259256.1| macrolide efflux ABC transport... 61 2e-07
gi|26990902|ref|NP_746327.1| ABC export system, permease/AT... 60 2e-07
gi|42522295|ref|NP_967675.1| Macrolide specific ABC-type tr... 60 3e-07
gi|24379816|ref|NP_721771.1| putative ABC transporter, memb... 60 3e-07
gi|148324037|gb|EDK89287.1| antimicrobial peptide ABC super... 60 3e-07
gi|153869422|ref|ZP_01999022.1| ABC transporter, permease p... 60 3e-07
gi|86140728|ref|ZP_01059287.1| ABC transporter, permease pr... 60 3e-07
gi|152974477|ref|YP_001373994.1| protein of unknown functio... 60 3e-07
gi|16759815|ref|NP_455432.1| conserved hypothetical ABC tra... 60 3e-07
gi|16764304|ref|NP_459919.1| putative transport protein [Sa... 60 3e-07
gi|62179467|ref|YP_215884.1| putative ABC superfamily (atp&... 60 3e-07
gi|20091320|ref|NP_617395.1| hypothetical protein MA2489 [M... 60 3e-07
gi|152986401|ref|YP_001348230.1| probable ATP-binding/perme... 60 3e-07
gi|16125183|ref|NP_419747.1| hypothetical protein CC_0931 [... 60 3e-07
gi|104782105|ref|YP_608603.1| macrolide ABC efflux protein ... 60 3e-07
gi|78059808|ref|YP_366383.1| protein of unknown function DU... 60 3e-07
gi|145296543|ref|YP_001139364.1| hypothetical protein cgR_2... 60 3e-07
gi|50841543|ref|YP_054770.1| ABC transporter associated per... 60 3e-07
gi|146295699|ref|YP_001179470.1| protein of unknown functio... 60 3e-07
gi|77980018|ref|ZP_00835433.1| COG4591: ABC-type transport ... 60 3e-07
gi|84320967|ref|ZP_00969334.1| COG0577: ABC-type antimicrob... 60 3e-07
gi|107101834|ref|ZP_01365752.1| hypothetical protein PaerPA... 60 3e-07
gi|89211338|ref|ZP_01189708.1| Protein of unknown function ... 60 3e-07
gi|106895029|ref|ZP_01362138.1| Protein of unknown function... 60 3e-07
gi|116050331|ref|YP_790852.1| putative ATP-binding/permease... 60 3e-07
gi|15597586|ref|NP_251080.1| probable ATP-binding/permease ... 60 3e-07
gi|60279990|gb|AAX16333.1| PA2390 [Pseudomonas aeruginosa] 60 3e-07
gi|34499397|ref|NP_903612.1| hypothetical protein CV_3942 [... 60 4e-07
gi|119356919|ref|YP_911563.1| protein of unknown function D... 60 4e-07
gi|125718340|ref|YP_001035473.1| ABC-type antimicrobial pep... 60 4e-07
gi|54026627|ref|YP_120869.1| putative ABC transporter perme... 60 4e-07
gi|114562987|ref|YP_750500.1| protein of unknown function D... 60 4e-07
gi|149908118|ref|ZP_01896782.1| export ABC transporter perm... 60 4e-07
gi|156934625|ref|YP_001438541.1| hypothetical protein ESA_0... 60 4e-07
gi|42527356|ref|NP_972454.1| ABC transporter, permease prot... 60 4e-07
gi|73670883|ref|YP_306898.1| hypothetical protein Mbar_A344... 60 4e-07
gi|83717068|ref|YP_439986.1| macrolide-specific ABC-type ef... 60 4e-07
gi|148826796|ref|YP_001291549.1| outer membrane-specific li... 60 4e-07
gi|153092764|gb|EDN73807.1| ABC superfamily ATP binding cas... 60 4e-07
gi|52425184|ref|YP_088321.1| hypothetical protein MS1129 [M... 60 4e-07
gi|148826070|ref|YP_001290823.1| hypothetical protein CGSHi... 60 4e-07
gi|153949780|ref|YP_001400579.1| lipoprotein releasing syst... 60 4e-07
gi|145642057|ref|ZP_01797628.1| outer membrane-specific lip... 60 4e-07
gi|77635900|ref|ZP_00797979.1| COG4591: ABC-type transport ... 60 4e-07
gi|16121896|ref|NP_405209.1| lipoprotein releasing system, ... 60 4e-07
gi|156111027|gb|EDO12772.1| hypothetical protein BACOVA_015... 60 5e-07
gi|109647405|ref|ZP_01371308.1| protein of unknown function... 60 5e-07
gi|59713647|ref|YP_206422.1| Lipoprotein releasing system t... 60 5e-07
gi|126178444|ref|YP_001046409.1| protein of unknown functio... 60 5e-07
gi|147920314|ref|YP_685915.1| predicted ABC-type transport ... 60 5e-07
gi|149192124|ref|ZP_01870346.1| outer membrane-specific lip... 60 5e-07
gi|116617457|ref|YP_817828.1| ABC-type antimicrobial peptid... 60 5e-07
gi|148378094|ref|YP_001252635.1| ABC transporter permease p... 60 5e-07
gi|153889535|ref|ZP_02010646.1| protein of unknown function... 60 5e-07
gi|134095407|ref|YP_001100482.1| transport protein of outer... 59 5e-07
gi|77963639|ref|ZP_00827447.1| COG4591: ABC-type transport ... 59 6e-07
gi|33152155|ref|NP_873508.1| macrolide-specific ABC-type ef... 59 6e-07
gi|91225266|ref|ZP_01260434.1| hypothetical protein V12G01_... 59 6e-07
gi|145634885|ref|ZP_01790592.1| outer membrane-specific lip... 59 6e-07
gi|53732822|ref|ZP_00349581.1| COG4591: ABC-type transport ... 59 6e-07
gi|90413107|ref|ZP_01221104.1| putative ABC transporter, in... 59 6e-07
gi|46133408|ref|ZP_00203154.1| COG4591: ABC-type transport ... 59 6e-07
gi|57240328|ref|ZP_00368277.1| ABC transporter, ATP-binding... 59 6e-07
gi|15896817|ref|NP_350166.1| Predicted permease [Clostridiu... 59 6e-07
gi|116754228|ref|YP_843346.1| protein of unknown function D... 59 6e-07
gi|150388208|ref|YP_001318257.1| protein of unknown functio... 59 6e-07
gi|134046118|ref|YP_001097604.1| protein of unknown functio... 59 6e-07
gi|88803889|ref|ZP_01119409.1| ABC transporter, permease pr... 59 7e-07
gi|78061574|ref|YP_371482.1| hypothetical protein Bcep18194... 59 7e-07
gi|153837340|ref|ZP_01990007.1| lipoprotein releasing syste... 59 7e-07
gi|152969469|ref|YP_001334578.1| macrolide transport protei... 59 7e-07
gi|75210431|ref|ZP_00710587.1| COG0577: ABC-type antimicrob... 59 7e-07
gi|149007840|ref|ZP_01831436.1| hypothetical protein CGSSp1... 59 8e-07
gi|145632938|ref|ZP_01788671.1| ABC-type transport system, ... 59 8e-07
gi|134298197|ref|YP_001111693.1| protein of unknown functio... 59 8e-07
gi|88801158|ref|ZP_01116702.1| ABC transporter, permease pr... 59 8e-07
gi|50120755|ref|YP_049922.1| lipoprotein releasing system t... 59 8e-07
gi|119713574|gb|ABL97625.1| putative ABC transport system p... 59 8e-07
gi|15611791|ref|NP_223442.1| hypothetical protein jhp0724 [... 59 8e-07
gi|88801157|ref|ZP_01116701.1| putative ABC transporter, pe... 59 8e-07
gi|84060877|ref|YP_444080.1| EtsB [Escherichia coli] >gi|12... 59 8e-07
gi|68249937|ref|YP_249049.1| ABC-type transport system, inv... 59 8e-07
gi|51245605|ref|YP_065489.1| hypothetical protein DP1753 [D... 59 8e-07
gi|91209915|ref|YP_539901.1| macrolide-specific ABC-type ef... 59 8e-07
gi|145639090|ref|ZP_01794698.1| ABC-type transport system, ... 59 8e-07
gi|75240944|ref|ZP_00724833.1| COG0577: ABC-type antimicrob... 59 9e-07
gi|122064315|sp|Q1BPZ6|MACB_BURCA Macrolide export ATP-bind... 59 9e-07
gi|75195068|ref|ZP_00705138.1| COG0577: ABC-type antimicrob... 59 9e-07
gi|16128847|ref|NP_415400.1| fused macrolide transporter su... 59 9e-07
gi|37525538|ref|NP_928882.1| Macrolide-specific ABC-type ef... 59 9e-07
gi|149175018|ref|ZP_01853641.1| Predicted permease [Plancto... 59 9e-07
gi|75229240|ref|ZP_00715805.1| COG0577: ABC-type antimicrob... 59 9e-07
gi|148992151|ref|ZP_01821925.1| hypothetical protein CGSSp9... 59 9e-07
gi|116514891|ref|YP_813797.1| ABC-type antimicrobial peptid... 59 9e-07
gi|78485516|ref|YP_391441.1| Lipoprotein releasing system, ... 59 9e-07
gi|114772738|ref|ZP_01450080.1| ABC-type transport systems,... 59 9e-07
gi|15901836|ref|NP_346440.1| hypothetical protein SP_2013 [... 59 1e-06
gi|111657103|ref|ZP_01407892.1| hypothetical protein SpneT_... 59 1e-06
gi|15830219|ref|NP_308992.1| putative ATP-binding component... 59 1e-06
gi|15800637|ref|NP_286651.1| putative ATP-binding component... 59 1e-06
gi|45358434|ref|NP_987991.1| hypothetical protein MMP0871 [... 59 1e-06
gi|145589649|ref|YP_001156246.1| lipoprotein releasing syst... 59 1e-06
gi|149003847|ref|ZP_01828675.1| hypothetical protein CGSSp1... 59 1e-06
gi|116693048|ref|YP_838581.1| ABC transporter related [Burk... 59 1e-06
gi|34557623|ref|NP_907438.1| hypothetical protein WS1259 [W... 59 1e-06
gi|118714404|ref|ZP_01566959.1| ABC transporter related [Bu... 59 1e-06
gi|84352619|ref|ZP_00977572.1| COG0577: ABC-type antimicrob... 59 1e-06
gi|145631789|ref|ZP_01787549.1| ABC-type transport system, ... 59 1e-06
gi|15903868|ref|NP_359418.1| hypothetical protein spr1826 [... 59 1e-06
gi|68549504|ref|ZP_00588967.1| Protein of unknown function ... 59 1e-06
gi|56460624|ref|YP_155905.1| ABC-type transport system, inv... 59 1e-06
gi|116619830|ref|YP_821986.1| protein of unknown function D... 59 1e-06
gi|24372410|ref|NP_716452.1| ABC transporter, ATP-binding/p... 59 1e-06
gi|153874278|ref|ZP_02002559.1| protein of unknown function... 59 1e-06
gi|119896902|ref|YP_932115.1| ATP-binding/permease fusion A... 59 1e-06
gi|45358084|ref|NP_987641.1| ABC transporter, permease prot... 59 1e-06
gi|109672408|ref|ZP_01374646.1| ABC transporter, ATP-bindin... 59 1e-06
gi|16273448|ref|NP_439697.1| hypothetical protein HI1548 [H... 59 1e-06
gi|24112255|ref|NP_706765.1| putative ATP-binding component... 58 1e-06
gi|74311424|ref|YP_309843.1| putative ATP-binding component... 58 1e-06
gi|116515615|ref|YP_817232.1| hypothetical protein SPD_1824... 58 1e-06
gi|51596762|ref|YP_070953.1| ABC tranporter/lipoprotein rel... 58 1e-06
gi|75178316|ref|ZP_00698370.1| COG0577: ABC-type antimicrob... 58 1e-06
gi|75214596|ref|ZP_00713136.1| COG0577: ABC-type antimicrob... 58 1e-06
gi|32265817|ref|NP_859849.1| hypothetical protein HH0318 [H... 58 1e-06
gi|75189920|ref|ZP_00703187.1| COG0577: ABC-type antimicrob... 58 1e-06
gi|54298922|ref|YP_125291.1| hypothetical protein lpp2989 [... 58 1e-06
gi|146311289|ref|YP_001176363.1| lipoprotein releasing syst... 58 1e-06
gi|88860906|ref|ZP_01135542.1| hypothetical protein PTD2_10... 58 1e-06
gi|121542731|ref|ZP_01674448.1| lipoprotein releasing syste... 58 1e-06
gi|86143876|ref|ZP_01062244.1| ABC-type transport systems, ... 58 1e-06
gi|114331336|ref|YP_747558.1| protein of unknown function D... 58 1e-06
gi|118045400|ref|ZP_01514061.1| protein of unknown function... 58 1e-06
gi|92089466|ref|ZP_01274408.1| conserved hypothetical prote... 58 1e-06
gi|118728193|ref|ZP_01576760.1| protein of unknown function... 58 1e-06
gi|153093880|gb|EDN74808.1| possible lipoprotein ABC superf... 58 1e-06
gi|37526702|ref|NP_930046.1| Lipoprotein releasing system t... 58 1e-06
gi|114763440|ref|ZP_01442847.1| lipoprotein releasing syste... 58 2e-06
gi|68553449|ref|ZP_00592823.1| ABC transporter:Protein of u... 58 2e-06
gi|148263720|ref|YP_001230426.1| protein of unknown functio... 58 2e-06
gi|71065140|ref|YP_263867.1| ABC macrolide efflux transport... 58 2e-06
gi|28870017|ref|NP_792636.1| macrolide ABC efflux protein M... 58 2e-06
gi|126667501|ref|ZP_01738472.1| transmembrane ATP-binding A... 58 2e-06
gi|52843116|ref|YP_096915.1| ABC transporter, permease [Leg... 58 2e-06
gi|150403456|ref|YP_001330750.1| protein of unknown functio... 58 2e-06
gi|149922453|ref|ZP_01910886.1| hypothetical protein PPSIR1... 58 2e-06
gi|157083646|gb|ABV13324.1| hypothetical protein CKO_02201 ... 58 2e-06
gi|19704163|ref|NP_603725.1| ABC transporter permease prote... 58 2e-06
gi|73668226|ref|YP_304241.1| ABC transporter, permease prot... 58 2e-06
gi|81429032|ref|YP_396032.1| Putative drug ABC exporter, AT... 58 2e-06
gi|154491749|ref|ZP_02031375.1| hypothetical protein PARMER... 58 2e-06
gi|89210486|ref|ZP_01188875.1| Protein of unknown function ... 58 2e-06
gi|153952422|ref|YP_001398238.1| putative permease [Campylo... 58 2e-06
gi|82543366|ref|YP_407313.1| putative ATP-binding component... 58 2e-06
gi|90411403|ref|ZP_01219414.1| hypothetical protein P3TCK_1... 58 2e-06
gi|120554264|ref|YP_958615.1| ABC transporter related [Mari... 58 2e-06
gi|83645163|ref|YP_433598.1| ABC-type transport system, inv... 58 2e-06
gi|126357287|ref|ZP_01714290.1| ABC transporter related [Ps... 58 2e-06
gi|57237769|ref|YP_179017.1| permease, putative [Campylobac... 57 2e-06
gi|148926134|ref|ZP_01809820.1| putative integral membrane ... 57 2e-06
gi|29347906|ref|NP_811409.1| putative ABC transporter, ATP-... 57 2e-06
gi|86738917|ref|YP_479317.1| protein of unknown function DU... 57 2e-06
gi|148989708|ref|ZP_01821017.1| hypothetical protein CGSSp6... 57 2e-06
gi|152987120|ref|YP_001350565.1| probable permease of ABC t... 57 2e-06
gi|148361253|ref|YP_001252460.1| ABC transporter, permease ... 57 2e-06
gi|148546922|ref|YP_001267024.1| ABC transporter related [P... 57 2e-06
gi|85059056|ref|YP_454758.1| lipoprotein releasing system t... 57 2e-06
gi|104774754|ref|YP_619734.1| ABC transporter, ATP-binding/... 57 2e-06
gi|154508388|ref|ZP_02044030.1| hypothetical protein ACTODO... 57 2e-06
gi|83311671|ref|YP_421935.1| ABC-type transport system, per... 57 2e-06
gi|58338181|ref|YP_194766.1| ABC transporter ATP binding pr... 57 2e-06
gi|116751161|ref|YP_847848.1| lipoprotein releasing system,... 57 2e-06
gi|119875407|ref|ZP_01642473.1| ABC transporter related [St... 57 2e-06
gi|121998042|ref|YP_001002829.1| lipoprotein releasing syst... 57 2e-06
gi|145622821|ref|ZP_01778775.1| protein of unknown function... 57 2e-06
gi|77972876|ref|ZP_00828432.1| COG4591: ABC-type transport ... 57 2e-06
gi|118068046|ref|ZP_01536300.1| ABC transporter related [Se... 57 2e-06
gi|94971403|ref|YP_593451.1| ABC efflux pump, inner membran... 57 3e-06
gi|118475255|ref|YP_891934.1| macrolide-specific ABC-type e... 57 3e-06
gi|152985881|ref|YP_001347545.1| hypothetical protein PSPA7... 57 3e-06
gi|15599789|ref|NP_253283.1| probable permease of ABC trans... 57 3e-06
gi|83591172|ref|YP_431181.1| Protein of unknown function DU... 57 3e-06
gi|15598184|ref|NP_251678.1| hypothetical protein PA2988 [P... 57 3e-06
gi|49475641|ref|YP_033682.1| Lipoprotein releasing system t... 57 3e-06
gi|126170594|gb|EAZ56105.1| hypothetical protein PACG_04825... 57 3e-06
gi|126197892|gb|EAZ61955.1| hypothetical protein PA2G_05375... 57 3e-06
gi|84317206|ref|ZP_00965659.1| COG0577: ABC-type antimicrob... 57 3e-06
gi|84323376|ref|ZP_00971449.1| COG0577: ABC-type antimicrob... 57 3e-06
gi|77917982|ref|YP_355797.1| ABC-type transport system, per... 57 3e-06
gi|107099744|ref|ZP_01363662.1| hypothetical protein PaerPA... 57 3e-06
gi|116052735|ref|YP_793052.1| putative ABC transporter [Pse... 57 3e-06
gi|146294257|ref|YP_001184681.1| ABC transporter related [S... 57 3e-06
gi|15801042|ref|NP_287058.1| hypothetical protein Z1554 [Es... 57 3e-06
gi|124544738|ref|ZP_01703986.1| ABC transporter related [Sh... 57 3e-06
gi|120597604|ref|YP_962178.1| ABC transporter related [Shew... 57 3e-06
gi|117921892|ref|YP_871084.1| ABC transporter related [Shew... 57 3e-06
gi|154488855|ref|ZP_02029704.1| hypothetical protein BIFADO... 57 3e-06
gi|58616806|ref|YP_196005.1| Lipoprotein releasing system t... 57 3e-06
gi|57238817|ref|YP_179953.1| putative lipoprotein releasing... 57 3e-06
gi|29376226|ref|NP_815380.1| permease protein, putative [En... 57 3e-06
gi|81096560|ref|ZP_00874900.1| Protein of unknown function ... 57 3e-06
gi|34557766|ref|NP_907581.1| PROBABLE TRANSMEMBRANE ATP-BIN... 57 3e-06
gi|117619235|ref|YP_857494.1| macrolide-specific ABC-type e... 57 3e-06
gi|145299912|ref|YP_001142753.1| ABC-type transporter, ATP-... 57 3e-06
gi|74317779|ref|YP_315519.1| lipoprotein releasing system, ... 57 3e-06
gi|107025770|ref|YP_623281.1| protein of unknown function D... 57 3e-06
gi|146311054|ref|YP_001176128.1| ABC transporter related [E... 57 3e-06
gi|120601937|ref|YP_966337.1| lipoprotein releasing system,... 57 3e-06
gi|88711034|ref|ZP_01105122.1| ABC transporter, permease pr... 57 3e-06
gi|30248830|ref|NP_840900.1| DUF214 [Nitrosomonas europaea ... 57 3e-06
gi|46580780|ref|YP_011588.1| lipoprotein releasing system, ... 57 3e-06
gi|149378068|ref|ZP_01895790.1| ABC-type transport system, ... 57 4e-06
gi|77974577|ref|ZP_00830116.1| COG0577: ABC-type antimicrob... 57 4e-06
gi|145637558|ref|ZP_01793215.1| outer membrane-specific lip... 57 4e-06
gi|148998776|ref|ZP_01826213.1| hypothetical protein CGSSp1... 57 4e-06
gi|15794315|ref|NP_284137.1| integral membrane protein [Nei... 57 4e-06
gi|90578104|ref|ZP_01233915.1| ABC-type antimicrobial pepti... 57 4e-06
gi|126175732|ref|YP_001051881.1| ABC transporter related [S... 57 4e-06
gi|116493378|ref|YP_805113.1| ABC-type antimicrobial peptid... 57 4e-06
gi|67154522|ref|ZP_00416267.1| Protein of unknown function ... 57 4e-06
gi|113950113|ref|ZP_01435749.1| ABC transporter related [Sh... 57 4e-06
gi|152999340|ref|YP_001365021.1| ABC transporter related [S... 57 4e-06
gi|81177400|ref|ZP_00876224.1| Protein of unknown function ... 57 4e-06
gi|23012408|ref|ZP_00052501.1| COG4591: ABC-type transport ... 57 4e-06
gi|70731438|ref|YP_261179.1| macrolide efflux ABC transport... 57 4e-06
gi|91793034|ref|YP_562685.1| Lipoprotein releasing system, ... 57 4e-06
gi|110602472|ref|ZP_01390554.1| Protein of unknown function... 57 4e-06
gi|146329236|ref|YP_001210109.1| ABC-type lipoprotein relea... 57 4e-06
gi|32474570|ref|NP_867564.1| probable ATP-binding/permease ... 57 4e-06
gi|54309555|ref|YP_130575.1| putative ABC transporter, inte... 56 4e-06
gi|87307060|ref|ZP_01089206.1| probable lipoprotein releasi... 56 4e-06
gi|56696020|ref|YP_166374.1| lipoprotein releasing system t... 56 5e-06
gi|154253643|ref|YP_001414467.1| lipoprotein releasing syst... 56 5e-06
gi|47564782|ref|ZP_00235826.1| ABC transporter, ATP-binding... 56 5e-06
gi|75760547|ref|ZP_00740582.1| Export ABC transporter perme... 56 5e-06
gi|53713160|ref|YP_099152.1| ABC transporter permease prote... 56 5e-06
gi|71909075|ref|YP_286662.1| Protein of unknown function DU... 56 5e-06
gi|114778142|ref|ZP_01453029.1| hypothetical protein SPV1_0... 56 5e-06
gi|145629721|ref|ZP_01785517.1| ABC-type transport system, ... 56 5e-06
gi|90961192|ref|YP_535108.1| ABC transporter, ATP-binding p... 56 5e-06
gi|83748273|ref|ZP_00945299.1| LolC [Ralstonia solanacearum... 56 5e-06
gi|124485020|ref|YP_001029636.1| hypothetical protein Mlab_... 56 5e-06
gi|52081526|ref|YP_080317.1| possible acetoin transport sys... 56 5e-06
gi|116622905|ref|YP_825061.1| protein of unknown function D... 56 5e-06
gi|118442876|ref|YP_877600.1| lipoprotein releasing system ... 56 6e-06
gi|29654316|ref|NP_820008.1| lipoprotein ABC transporter, p... 56 6e-06
gi|153206738|ref|ZP_01945579.1| lipoprotein ABC transporter... 56 6e-06
gi|89208359|ref|ZP_01186870.1| Protein of unknown function ... 56 6e-06
gi|11498622|ref|NP_069850.1| hypothetical protein AF1017 [A... 56 6e-06
gi|126650468|ref|ZP_01722691.1| hypothetical protein BB1490... 56 6e-06
gi|95927309|ref|ZP_01310069.1| hypothetical protein CburR_0... 56 6e-06
gi|89075698|ref|ZP_01162093.1| ABC-type antimicrobial pepti... 56 6e-06
gi|154173690|ref|YP_001408250.1| macrolide export ATP-bindi... 56 6e-06
gi|86150730|ref|ZP_01068946.1| permease, putative [Campylob... 56 6e-06
gi|121613149|ref|YP_001000624.1| permease, putative [Campyl... 56 6e-06
gi|154497699|ref|ZP_02036077.1| hypothetical protein BACCAP... 56 6e-06
gi|54302049|ref|YP_132042.1| hypothetical protein PBPRB0369... 56 6e-06
gi|77956321|ref|ZP_00820432.1| COG4591: ABC-type transport ... 56 6e-06
gi|15792270|ref|NP_282093.1| putative integral membrane pro... 56 6e-06
gi|28211095|ref|NP_782039.1| putative permease [Clostridium... 56 6e-06
gi|91793032|ref|YP_562683.1| Lipoprotein releasing system, ... 56 7e-06
gi|122064313|sp|Q2YRG7|MACB_BRUA2 Macrolide export ATP-bind... 56 7e-06
gi|28211463|ref|NP_782407.1| ABC transporter ATP-binding pr... 56 7e-06
gi|122064314|sp|Q8YIT2|MACB_BRUME Macrolide export ATP-bind... 56 7e-06
gi|15677107|ref|NP_274259.1| hypothetical protein NMB1235 [... 56 7e-06
gi|42782273|ref|NP_979520.1| permease, putative [Bacillus c... 56 7e-06
gi|50085711|ref|YP_047221.1| transport protein of outer mem... 56 7e-06
gi|27365415|ref|NP_760943.1| hypothetical protein VV1_2082 ... 56 7e-06
gi|126466329|ref|YP_001041438.1| protein of unknown functio... 56 7e-06
gi|77976595|ref|ZP_00832075.1| COG0577: ABC-type antimicrob... 55 8e-06
gi|150382949|ref|ZP_01921811.1| lipoprotein releasing syste... 55 8e-06
gi|150010153|ref|YP_001304896.1| ABC transporter, putative ... 55 8e-06
gi|56460622|ref|YP_155903.1| ABC-type transport system, inv... 55 8e-06
gi|94971402|ref|YP_593450.1| ABC efflux pump, inner membran... 55 8e-06
gi|42522999|ref|NP_968379.1| Lipoprotein releasing system t... 55 8e-06
gi|33592244|ref|NP_879888.1| lipoprotein releasing system t... 55 8e-06
gi|73670882|ref|YP_306897.1| putative ABC transporter perme... 55 8e-06
gi|148259325|ref|YP_001233452.1| ABC transporter related [A... 55 8e-06
gi|20091110|ref|NP_617185.1| ABC transporter, permease prot... 55 9e-06
gi|83592913|ref|YP_426665.1| Lipoprotein releasing system, ... 55 9e-06
gi|146299429|ref|YP_001194020.1| protein of unknown functio... 55 9e-06
gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding... 55 9e-06
gi|17986644|ref|NP_539278.1| ABC TRANSPORTER ATP-BINDING PR... 55 9e-06
gi|20092755|ref|NP_618830.1| ABC transporter, permease prot... 55 9e-06
gi|149121004|ref|ZP_01847441.1| lipoprotein releasing syste... 55 9e-06
gi|114047311|ref|YP_737861.1| lipoprotein releasing system,... 55 9e-06
gi|126656747|ref|ZP_01727961.1| hypothetical protein CY0110... 55 9e-06
gi|145591287|ref|YP_001153289.1| protein of unknown functio... 55 9e-06
gi|82700459|ref|YP_415033.1| Protein of unknown function DU... 55 9e-06
gi|152990578|ref|YP_001356300.1| hypothetical protein NIS_0... 55 9e-06
gi|156740288|ref|YP_001430417.1| protein of unknown functio... 55 9e-06
gi|70729343|ref|YP_259080.1| lipoprotein releasing system t... 55 9e-06
gi|148269706|ref|YP_001244166.1| protein of unknown functio... 55 9e-06
gi|11496870|ref|NP_045651.1| hypothetical protein BBJ27 [Bo... 55 1e-05
gi|123442015|ref|YP_001005998.1| lipoprotein releasing syst... 55 1e-05
>gi|42527357|ref|NP_972455.1| ABC transporter, permease protein, putative [Treponema denticola
ATCC 35405]
gi|41817942|gb|AAS12366.1| ABC transporter, permease protein, putative [Treponema denticola
ATCC 35405]
Length = 506
Score = 959 bits (2478), Expect = 0.0, Method: Composition-based stats.
Identities = 506/506 (100%), Positives = 506/506 (100%)
Query: 1 MNKTIFKMAVKNLFASKAKMIITLSLIGIGTFLVILGFGILNFSLQQTQEVCISDFSGDV 60
MNKTIFKMAVKNLFASKAKMIITLSLIGIGTFLVILGFGILNFSLQQTQEVCISDFSGDV
Sbjct: 1 MNKTIFKMAVKNLFASKAKMIITLSLIGIGTFLVILGFGILNFSLQQTQEVCISDFSGDV 60
Query: 61 LITGKPEKDTVMVQLLGVFQTVSVSMDTPKMPYLVPFEKVKSKVESLPDVKGLTPSVFAS 120
LITGKPEKDTVMVQLLGVFQTVSVSMDTPKMPYLVPFEKVKSKVESLPDVKGLTPSVFAS
Sbjct: 61 LITGKPEKDTVMVQLLGVFQTVSVSMDTPKMPYLVPFEKVKSKVESLPDVKGLTPSVFAS 120
Query: 121 GMLKALDLPDSWEAEDKNRSFLPYAQILGIEPESYKNLFDTINIYEGEYPKTSNGKFALI 180
GMLKALDLPDSWEAEDKNRSFLPYAQILGIEPESYKNLFDTINIYEGEYPKTSNGKFALI
Sbjct: 121 GMLKALDLPDSWEAEDKNRSFLPYAQILGIEPESYKNLFDTINIYEGEYPKTSNGKFALI 180
Query: 181 PRDLKEKFEKYYDRPLNLGDEILVTAFAGKARQQKVIITGFFDYAHPDTAIDGIAYFDVD 240
PRDLKEKFEKYYDRPLNLGDEILVTAFAGKARQQKVIITGFFDYAHPDTAIDGIAYFDVD
Sbjct: 181 PRDLKEKFEKYYDRPLNLGDEILVTAFAGKARQQKVIITGFFDYAHPDTAIDGIAYFDVD 240
Query: 241 TTRILADMTMGARVAAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLL 300
TTRILADMTMGARVAAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLL
Sbjct: 241 TTRILADMTMGARVAAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLL 300
Query: 301 GSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMY 360
GSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMY
Sbjct: 301 GSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMY 360
Query: 361 YSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
YSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA
Sbjct: 361 YSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAM 480
ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAM
Sbjct: 421 ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAM 480
Query: 481 LLAGLAANWYPVRLALKISPLEAINR 506
LLAGLAANWYPVRLALKISPLEAINR
Sbjct: 481 LLAGLAANWYPVRLALKISPLEAINR 506
>gi|108760326|ref|YP_630649.1| ABC transporter, permease protein [Myxococcus xanthus DK 1622]
gi|108464206|gb|ABF89391.1| ABC transporter, permease protein [Myxococcus xanthus DK 1622]
Length = 702
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 23/329 (6%)
Query: 196 LNLGDEILVTAFAGKARQQKVIITGFFDYAHPDTAIDGIA----------------YFDV 239
L +GD + +TAF Q V + + Y +A Y
Sbjct: 373 LRMGDVLTITAFTRTGYMQSVNVKVYGTYQFKGLEKSAMAGALSLMDLMSFRDLYGYLTA 432
Query: 240 DTTRILADMTMGARVAAAIPDSVDLSL-SEKSEDELFADDSGADIIDTVQNSNSK--IDY 296
D LA++ + + A D + +L E S++EL A+ + +D+ D + + +
Sbjct: 433 DKKAELAEIQKQSGLEALSRDEAEEALFGEASDNELVAEATSSDVDDQAAFTGDQGALTR 492
Query: 297 ENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERG 356
ENLL + + + + LKD + + L K+ G+ R V+W+
Sbjct: 493 ENLLQRVYTQQEI---EQGVALSAAVMLKDPELLEQTMVELRQAAKDAGLKLRVVSWQEA 549
Query: 357 MAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRK 416
+ + +++ + I+ VV L++I N +++A MQR E+GTMRAIGA++ F+
Sbjct: 550 AGIIGQFVLLGKLVLYFAVFIIFVVALVIINNAMMMATMQRVREVGTMRAIGAQRSFILG 609
Query: 417 IFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVG-DILAAMFGGKQIRVSISIGSAVW 475
+ E+ + V G ++ A++N+ I G + L F G ++ ++S + V
Sbjct: 610 MVLVETLVLGLVFGSAGSLVGSGIMALLNSAGIPAGNEALYFFFSGPRLFPTLSASNLVA 669
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAI 504
+L + YP LA ++SPL+A+
Sbjct: 670 AFVIVLGVSAISTLYPAFLATRVSPLQAM 698
>gi|115379701|ref|ZP_01466779.1| efflux ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
gi|115363291|gb|EAU62448.1| efflux ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
Length = 686
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 270 SEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHI--------V 321
+ED LF +S DI+ + + ++ ID E++L E + +L + +
Sbjct: 443 AEDALFGSNS--DIVGSAEQAH--IDEESVLEGREPGENKSLKETYTQEELDQSVVLSAA 498
Query: 322 IKLKDSSKTQSVIKTLNDWFKEEGISARAVNWER--GMAMYYSAIEGTRILFITMLAILS 379
+ LK + +SV L D + +G+ + W++ G+ ++ + + F + +
Sbjct: 499 VLLKPGNSLESVAPALEDLAQNKGLPIKLSTWKQASGLIGQFTLVVKAALYFGVFM--IF 556
Query: 380 VVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV-GVLIGLVLAL 438
VV LIVI N +++A +QR EIGTMRAIGA++GFVR + E+ F+ G + L L
Sbjct: 557 VVALIVINNAMMMAALQRVREIGTMRAIGAQRGFVRWMIILETLFLGITFGSMGALASVL 616
Query: 439 IAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKI 498
+ + N V D + F G ++ SIS+ + + +L + + YP LA ++
Sbjct: 617 LMGYLGNTGLPAVTDEMHFFFSGPRLFPSISVANLLAGYVMVLGVSVLSTLYPAILATRV 676
Query: 499 SPLEAI 504
SP++A+
Sbjct: 677 SPVQAM 682
>gi|153003369|ref|YP_001377694.1| protein of unknown function DUF214 [Anaeromyxobacter sp. Fw109-5]
gi|152026942|gb|ABS24710.1| protein of unknown function DUF214 [Anaeromyxobacter sp. Fw109-5]
Length = 712
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 31/257 (12%)
Query: 268 EKSEDELFAD-------------DSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADN 314
E++E ELF D GA + ++ S D + S E +R +A N
Sbjct: 463 ERAEAELFGGGGGLVGEARAAEIDEGALVAGREEDRASAADLAARVYSREELER-GVALN 521
Query: 315 EAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITM 374
A + L+D + + + ++ G+ + V+W+ + + R++ T
Sbjct: 522 AA-----LILEDPRQLDRTRRDVEAAIRDAGLGLKVVDWQEAAGLVGQFVTLLRVVLFTA 576
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGL 434
+ I + L++I N +V+A +QR EIGTMRAIG ++ FV + E ++ VGV+ G+
Sbjct: 577 VVIFFAIALVIINNAMVMATLQRVKEIGTMRAIGTQRRFVVTMLLVE---IATVGVVFGI 633
Query: 435 VLALIAAAVVNAFDIR-------VGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAA 487
AL+ VV + IR V D+L +F G + + + ++ +LL + +
Sbjct: 634 AGALLGGVVV--WGIRAAGGIPAVTDLLYFVFSGPALFPRLGALAVGGSLVVVLLVAILS 691
Query: 488 NWYPVRLALKISPLEAI 504
YP +A++++P+EA+
Sbjct: 692 ALYPAVIAMRVTPVEAM 708
>gi|124008067|ref|ZP_01692766.1| efflux ABC transporter, permease protein [Microscilla marina ATCC
23134]
gi|123986481|gb|EAY26287.1| efflux ABC transporter, permease protein [Microscilla marina ATCC
23134]
Length = 408
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 117/228 (51%), Gaps = 6/228 (2%)
Query: 283 IIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFK 342
I+ ++SN+ D N+ +L L ++ HHIV ++ + V+K L
Sbjct: 182 IVGLYKSSNTVYDESNVFVRQNDLQKL-LGNDVLIHHIVCRVDNYQVAPEVVKNLQGKLA 240
Query: 343 EEGISARAVNW-ERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEI 401
+ + +W + + Y+ +++LFI + I+ + + + I+NT+++AV++R+ E+
Sbjct: 241 KNHQNITVQSWKDTSPDLAYANDMMSQMLFI-FVGIILLGLSMGIVNTMLMAVLERTREL 299
Query: 402 GTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAM--F 459
G + A+G KG V ++ E+FF++CVG IG++LA + I +G + + F
Sbjct: 300 GMLMAVGMSKGRVFRMIVIETFFLTCVGAPIGILLAWATIQYTGSNGIDLGMFSSGLENF 359
Query: 460 GGKQIRVSISIGSAVWTMAAMLL-AGLAANWYPVRLALKISPLEAINR 506
G I + GS + M++ A L + YP ALK+ P+EAI +
Sbjct: 360 GYDSIIRPMIEGSYYAQIGLMVVAAALLSAIYPAIKALKLKPVEAIRK 407
>gi|126178445|ref|YP_001046410.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
gi|125861239|gb|ABN56428.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
Length = 397
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 315 EAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITM 374
+ + +V+K+ D S+ + V ++ ++ + ++Y + I + +
Sbjct: 206 QDYSRVVVKVGDLSEIEGVKAAIDQQINRRKEVVDVLDSREILEIFYETTDAINIFLLGI 265
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGL 434
A+ +V + I+N ++++V +R+ EIG MR+IGA+K V ++F ES + G + G
Sbjct: 266 GAVSLLVASVSILNVMIISVTERTGEIGLMRSIGARKREVLRMFLYESLVLGIAGSIAGG 325
Query: 435 VLALIAAAVVNAFDIRVGDILA--AMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPV 492
++++ A V V + L AM G I V++ IG + MA + A +YP
Sbjct: 326 IVSIAVAYYVTT---TVAEYLTDFAMSAGAGIPVTVVIGYVAFAMAFGTATSIVAGFYPA 382
Query: 493 RLALKISPLEAI 504
A +++P+EA+
Sbjct: 383 WKAAQLNPIEAL 394
>gi|87122130|ref|ZP_01078014.1| hypothetical protein MED121_04273 [Marinomonas sp. MED121]
gi|86162677|gb|EAQ63958.1| hypothetical protein MED121_04273 [Marinomonas sp. MED121]
Length = 413
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 22/271 (8%)
Query: 229 TAIDGIAYFDVDTTRILADMTMGARVAAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQ 288
T I+G F D L + + A I D + L L+ ++ + A D I+ +
Sbjct: 141 TLIEGEDLFPEDQAGALVGQGLYNALNANIGDYLTL-LASTADGAVNAVD--VQIVGAIN 197
Query: 289 NSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISA 348
++D N L L +L + +V+ LKD+++TQ V+ L+ F++EG++
Sbjct: 198 TGTREVD--NRLLRINLSHAQDLQFTQGVSRLVVLLKDTAQTQIVMDKLSQLFEQEGLTL 255
Query: 349 RAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTM 404
+W + +A YY + LF + L ++VL + I NT+++AVM+R+ EIG++
Sbjct: 256 EMRSWSQ-LADYYHEVVN---LFDGVFGFLKIIVLFIAALSIANTMMMAVMERTPEIGSI 311
Query: 405 RAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQ- 463
RA+GA + V +F E+ ++ G +G++L + A + + I+ G Q
Sbjct: 312 RALGATRHEVMMLFLTEASYLGLFGSTLGVLLGIFMANSITLAEF----IMPTPPGSSQS 367
Query: 464 --IRVSISIGSAVWTMAAM-LLAGLAANWYP 491
IR+ + + VW A +L + A+ YP
Sbjct: 368 YPIRIFVE-WTVVWQTALTGVLVAVLASIYP 397
>gi|115376589|ref|ZP_01463820.1| ABC transporter, permease protein, putative [Stigmatella aurantiaca
DW4/3-1]
gi|115366394|gb|EAU65398.1| ABC transporter, permease protein, putative [Stigmatella aurantiaca
DW4/3-1]
Length = 391
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 81/154 (52%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
NWE ++ ++G L + +L V++ + IMNTL +A+ +R+ E+GT+RAIG ++
Sbjct: 235 NWEDEISFVQWVVKGLGFLTGFLTFVLLVIIAVGIMNTLWIAIRERTREVGTLRAIGMQR 294
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
V +F E+ +S L G LA + +NA +R +++ M + + + G
Sbjct: 295 RRVLVMFLTEALMLSLSATLAGATLATLFCLAINAQSVRAPEVVQVMLLTENWFLKVEPG 354
Query: 472 SAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
S + + + L +A + P LA ++ P+ A++
Sbjct: 355 SVAFAVTLITLCAMAVSLIPSFLAARMKPVTAMH 388
>gi|121634344|ref|YP_974589.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis FAM18]
gi|120866050|emb|CAM09788.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis FAM18]
Length = 644
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+KD++ TQ K L D K G +N + + GT L I+ +A++
Sbjct: 468 ITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALI 527
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S+VV I +MN ++V+V +R+ EIG AIGA++G + + F E+ + +G L+G+ L+
Sbjct: 528 SLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLS 587
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ V N F V D + IS S + +A G+A + P A K
Sbjct: 588 AAVSLVFNHF---VTD----------FPMDISAMSVIGAVACSTGIGIAFGFMPANKAAK 634
Query: 498 ISPLEAI 504
++P++A+
Sbjct: 635 LNPIDAL 641
>gi|15793705|ref|NP_283527.1| ABC transporter ATP-binding protein [Neisseria meningitidis Z2491]
gi|81543047|sp|Q9JVR5|MACB_NEIMA Macrolide export ATP-binding/permease protein macB
gi|121051679|emb|CAM07982.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 644
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+KD++ TQ K L D K G +N + + GT L I+ +A++
Sbjct: 468 ITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALI 527
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S+VV I +MN ++V+V +R+ EIG AIGA++G + + F E+ + +G L+G+ L+
Sbjct: 528 SLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLS 587
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ V N F V D + IS S + +A G+A + P A K
Sbjct: 588 AAVSLVFNHF---VTD----------FPMDISAMSVIGAVACSTGIGIAFGFMPANKAAK 634
Query: 498 ISPLEAI 504
++P++A+
Sbjct: 635 LNPIDAL 641
>gi|15676455|ref|NP_273594.1| ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
gi|81784931|sp|Q9K0N7|MACB_NEIMB Macrolide export ATP-binding/permease protein macB
gi|7225775|gb|AAF40978.1| ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
Length = 644
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+KD++ TQ K L D K G +N + + GT L I+ +A++
Sbjct: 468 ITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQIVESTTGTMKLLISSIALI 527
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S+VV I +MN ++V+V +R+ EIG AIGA++G + + F E+ + +G L+G+ L+
Sbjct: 528 SLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQQFLIEAVLICVIGGLVGVGLS 587
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ V N F V D + IS S + +A G+A + P A K
Sbjct: 588 AAVSLVFNHF---VTD----------FPMDISAMSVIGAVACSTGIGIAFGFMPANKAAK 634
Query: 498 ISPLEAI 504
++P++A+
Sbjct: 635 LNPIDAL 641
>gi|108758874|ref|YP_630648.1| hypothetical protein MXAN_2428 [Myxococcus xanthus DK 1622]
gi|108462754|gb|ABF87939.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 433
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 79/154 (51%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
NWE ++ + L ++ +L V++ + IMNTL +A+ +R+ EIGT+RAIG ++
Sbjct: 277 NWEDEISFITWTLTALNSLTGVLIFVLMVIIGVGIMNTLWIAIRERTREIGTLRAIGMQR 336
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
V +F E+ + +G L G L+ VNA + V +++A + +++
Sbjct: 337 TRVLLMFVFEALLLGMLGTLAGASTGLVLCLAVNAMAVHVPEVVAVFIMSDTLNLAVHPS 396
Query: 472 SAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
S + MA + A + P LA ++ P+ A++
Sbjct: 397 SILGAMAFITACTTAISLIPSFLAARLKPVTAMH 430
>gi|59801781|ref|YP_208493.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae FA 1090]
gi|75355670|sp|Q5F6V6|MACB_NEIG1 Macrolide export ATP-binding/permease protein macB
gi|59718676|gb|AAW90081.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae FA 1090]
Length = 644
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+KD++ T+ K L + K G +N + + GT L I+ +A++
Sbjct: 468 ITVKIKDNANTRVAEKGLAELLKARHGTEDFFMNNSDSIRQMVESTTGTMKLLISSIALI 527
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S+VV I +MN ++V+V +R+ EIG AIGA++G + + F E+ + +G L+G+ L+
Sbjct: 528 SLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQQFLIEAVLICIIGGLVGVGLS 587
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ V N F V D + IS S + +A G+A + P A K
Sbjct: 588 AAVSLVFNHF---VTD----------FPMDISAASVIGAVACSTGIGIAFGFMPANKAAK 634
Query: 498 ISPLEAI 504
++P++A+
Sbjct: 635 LNPIDAL 641
>gi|75350657|sp|Q5MK06|MACB_NEIGO Macrolide export ATP-binding/permease protein macB
gi|56385102|gb|AAV85982.1| MacB [Neisseria gonorrhoeae]
Length = 644
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+KD++ T+ K L + K G +N + + GT L I+ +A++
Sbjct: 468 ITVKIKDNANTRVAEKGLAELLKARHGTEDFFMNNSDSIRQMVESTTGTMKLLISSIALI 527
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S+VV I +MN ++V+V +R+ EIG AIGA++G + + F E+ + +G L+G+ L+
Sbjct: 528 SLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQQFLIEAVLICIIGGLVGVGLS 587
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ V N F V D + IS S + +A G+A + P A K
Sbjct: 588 AAVSLVFNHF---VTD----------FPMDISAASVIGAVACSTGIGIAFGFMPANKAAK 634
Query: 498 ISPLEAI 504
++P++A+
Sbjct: 635 LNPIDAL 641
>gi|86160354|ref|YP_467139.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776865|gb|ABC83702.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 713
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 324 LKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVL 383
L+D S+ + ++ + G+ + ++W++ + + R++ + + I + L
Sbjct: 527 LRDPSRLRDTLRDVQAASDRAGLHLKVIDWQQASGLVGQFVTLLRVILYSAVVIFFAIAL 586
Query: 384 IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAE------SFFMSCVGVLIGLVLA 437
++I N +V+A +QR EIGT+RAIGA++ FV + E +F ++ G+ V A
Sbjct: 587 VIINNAMVMATLQRVKEIGTLRAIGAQRRFVLAMMLVEIASVGLAFGLAGAGLGGLGVWA 646
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ AA + A D+L +F G + ++ GS ++ +++ + + +YP LA++
Sbjct: 647 VRAAGGIPA----TSDLLNFLFSGPALMPTLGGGSVAVSIVVVVVVSVLSGFYPALLAMR 702
Query: 498 ISPLEAI 504
++P+EA+
Sbjct: 703 VTPVEAM 709
>gi|153815064|ref|ZP_01967732.1| hypothetical protein RUMTOR_01281 [Ruminococcus torques ATCC 27756]
gi|145847632|gb|EDK24550.1| hypothetical protein RUMTOR_01281 [Ruminococcus torques ATCC 27756]
Length = 465
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 376 AILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLV 435
A+ V I I NT+++++ +R+ EIG M+ IG G +R++F E+ F+ G +IG V
Sbjct: 339 AVSLFVAAIGIANTMMMSIYERTKEIGVMKVIGCSLGNIRQMFLLEAAFIGLGGGVIGNV 398
Query: 436 LALIAAAVVNAFDIRVGDILAAMFGGKQIRVS-ISIGSAVWTMAAMLLAGLAANWYPVRL 494
L+ + +A +NA + G ++S I + + ++ +L G AA ++P R
Sbjct: 399 LSFLMSAAINAL------VKGKEMGMTTGQISYIPLWLVLVSLGFAMLVGTAAGYFPARR 452
Query: 495 ALKISPLEAI 504
A+K+SPL AI
Sbjct: 453 AMKLSPLAAI 462
>gi|76818324|ref|YP_336629.1| putative permease [Burkholderia pseudomallei 1710b]
gi|76582797|gb|ABA52271.1| putative permease [Burkholderia pseudomallei 1710b]
Length = 716
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 578 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 637
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 638 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 691
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 692 VAGFSAWLPARHAARLSIVDAL 713
>gi|15669701|ref|NP_248514.1| hypothetical protein MJ1507 [Methanocaldococcus jannaschii DSM
2661]
gi|2496185|sp|Q58902|Y1507_METJA Uncharacterized ABC transporter permease MJ1507
gi|1592141|gb|AAB99519.1| hypothetical protein MJ_1507 [Methanocaldococcus jannaschii DSM
2661]
Length = 399
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 330 TQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIV-IMN 388
++ + K L F +E S +A S++ G +F+ +A +S++V V I N
Sbjct: 232 SEEIKKALKKSFGDEDFSVLTA---EQLAKTVSSVLGVITIFVVGVAAISLLVGAVGISN 288
Query: 389 TLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFD 448
T+ +++++R +IG ++A+GA+ + IF ES F+ G ++GLVL ++ A V+ A
Sbjct: 289 TMHMSILERRKDIGILKALGAETTDILAIFVVESGFLGLFGGIVGLVLGILLAEVIEALA 348
Query: 449 IRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
++G ++ + ++ V + I S L G+ + ++P R K++P+E +
Sbjct: 349 HKMGYLMVNAWISWELIVGVLIFS--------FLVGVISGYFPARSGAKLNPIETL 396
>gi|126442800|ref|YP_001064248.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei
668]
gi|126222291|gb|ABN85796.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei
668]
Length = 475
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 337 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 397 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 450
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 451 VAGFSAWLPARHAARLSIIDAL 472
>gi|83717341|ref|YP_440531.1| ABC transporter, permease protein, putative [Burkholderia
thailandensis E264]
gi|83651166|gb|ABC35230.1| ABC transporter, permease protein, putative [Burkholderia
thailandensis E264]
Length = 477
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 339 MIFGFVFVLIGAIVLFVVSNTMSAAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 398
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VN LA + V++++ W + A+ AGLA
Sbjct: 399 GASIGVLVALALAFAVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFAGLAF 452
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 453 VAGLSAWLPARHAARLSIVDAL 474
>gi|82534412|ref|ZP_00893447.1| hypothetical protein Bpse110_02004311 [Burkholderia pseudomallei
1106b]
gi|126456102|ref|YP_001077172.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei
1106a]
gi|126229870|gb|ABN93283.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei
1106a]
Length = 475
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 337 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 397 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 450
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 451 VAGFSAWLPARHAARLSIVDAL 472
>gi|134281899|ref|ZP_01768606.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei
305]
gi|134246961|gb|EBA47048.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei
305]
Length = 475
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 337 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 397 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 450
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 451 VAGFSAWLPARHAARLSIVDAL 472
>gi|53723341|ref|YP_112326.1| permease [Burkholderia pseudomallei K96243]
gi|90290962|ref|ZP_01210601.1| hypothetical protein Bpse17_02004369 [Burkholderia pseudomallei
1710a]
gi|100121884|ref|ZP_01327782.1| hypothetical protein BpseS_03004148 [Burkholderia pseudomallei S13]
gi|52213755|emb|CAH39810.1| putative permease [Burkholderia pseudomallei K96243]
Length = 475
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 337 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 397 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 450
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 451 VAGFSAWLPARHAARLSIVDAL 472
>gi|99908520|ref|ZP_01316203.1| hypothetical protein Bpse1_03004448 [Burkholderia pseudomallei
1655]
Length = 475
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 337 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 397 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 450
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 451 VAGFSAWLPARHAARLSIVDAL 472
>gi|100059925|ref|ZP_01322056.1| hypothetical protein BpseP_03004154 [Burkholderia pseudomallei
Pasteur]
gi|100231480|ref|ZP_01332973.1| hypothetical protein Bpse4_03004568 [Burkholderia pseudomallei
406e]
Length = 472
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 334 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 393
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 394 GASIGVLVALALAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 447
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 448 VAGFSAWLPARHAARLSIVDAL 469
>gi|53715894|ref|YP_106592.1| putative ABC transporter, permease protein [Burkholderia mallei
ATCC 23344]
gi|67640413|ref|ZP_00439221.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Burkholderia mallei GB8
horse 4]
gi|83618344|ref|ZP_00928808.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Burkholderia mallei FMH]
gi|83623256|ref|ZP_00933533.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Burkholderia mallei JHU]
gi|100267308|ref|ZP_01341571.1| hypothetical protein Bmal2_03000720 [Burkholderia mallei
2002721280]
gi|100916546|ref|ZP_01345028.1| hypothetical protein Bmal10_03001990 [Burkholderia mallei 10399]
gi|121597577|ref|YP_990711.1| efflux ABC transporter, permease protein [Burkholderia mallei
SAVP1]
gi|124382534|ref|YP_001025193.1| efflux ABC transporter, permease protein [Burkholderia mallei NCTC
10229]
gi|126445824|ref|YP_001079547.1| efflux ABC transporter, permease protein [Burkholderia mallei NCTC
10247]
gi|52421864|gb|AAU45434.1| putative ABC transporter, permease protein [Burkholderia mallei
ATCC 23344]
gi|121225375|gb|ABM48906.1| efflux ABC transporter, permease protein [Burkholderia mallei
SAVP1]
gi|124290554|gb|ABM99823.1| efflux ABC transporter, permease protein [Burkholderia mallei NCTC
10229]
gi|126238678|gb|ABO01790.1| efflux ABC transporter, permease protein [Burkholderia mallei NCTC
10247]
gi|147745852|gb|EDK52931.1| efflux ABC transporter, permease protein [Burkholderia mallei FMH]
gi|147755066|gb|EDK62130.1| efflux ABC transporter, permease protein [Burkholderia mallei JHU]
gi|148025177|gb|EDK83346.1| efflux ABC transporter, permease protein [Burkholderia mallei
2002721280]
Length = 475
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++ +VL V+ NT+ A+++R+ EIGT+R++G ++G ++ +F E + V
Sbjct: 337 MIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVV 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-AVWTMAAMLLAGLA- 486
G IG+++AL A VVN LA + V++++ W + A+ GLA
Sbjct: 397 GASIGVLVALAFAFVVNHSG------LAWTPPARIDSVALTVRVWGEWRLIALTFVGLAF 450
Query: 487 ----ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 451 VAGFSAWLPARHAARLSIVDAL 472
>gi|115379702|ref|ZP_01466780.1| efflux ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
gi|115363292|gb|EAU62449.1| efflux ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
Length = 408
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 351 VNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
VNW GM +L ++ +L V + + +MNTL +A+ +R+ E+GT+RAIG +
Sbjct: 260 VNWTSGM---------LNVLSFALMFVLIVTIAVGLMNTLWIAIRERTQEVGTLRAIGMQ 310
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI 470
+ V +F E+ +S + G VL I A++NA + V + G ++ + +
Sbjct: 311 RSRVVLMFALEALVLSVMSAGTGAVLGSILCAILNALQVPVPHAVQLFLMGDRLYLLVDA 370
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
A++++ + A P LA ++ P+ A++
Sbjct: 371 EVALFSITMISACTTAIALIPSFLAARLKPITAMH 405
>gi|57242035|ref|ZP_00369975.1| conserved hypothetical integral membrane protein [Campylobacter
upsaliensis RM3195]
gi|57017227|gb|EAL54008.1| conserved hypothetical integral membrane protein [Campylobacter
upsaliensis RM3195]
Length = 397
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 350 AVNWERGMAMYYSAIE-GTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIG 408
A+ W ++SA+E R LFI ++ I+ V L +I ++L++ VM R SEI + A+G
Sbjct: 242 AIGWWEQNQNFFSALELEKRALFIVLMLIILVAGLNII-SSLLMIVMNRRSEIALLLALG 300
Query: 409 AKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSI 468
A K ++K FFA + G++ G++LA + ++ FD+ + A ++G ++ + +
Sbjct: 301 ASKKEIKKSFFALGMLIGGSGMVCGVILAFVVLWLLGNFDLV--SLPADVYGTSKLPLDL 358
Query: 469 SIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
S+ V T+ L+ +++YP + A +++ L+ +
Sbjct: 359 SVLDFVLTLMGALVIIALSSFYPAKKATEVNILDTL 394
>gi|67156832|ref|ZP_00418329.1| Protein of unknown function DUF214 [Azotobacter vinelandii AvOP]
gi|67086021|gb|EAM05492.1| Protein of unknown function DUF214 [Azotobacter vinelandii AvOP]
Length = 416
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 287 VQNSNSKID-YENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEG 345
+Q NS ++ E+ L L NL D + I + L D T+ + TL + G
Sbjct: 197 LQTFNSPVEALEDKLMLVNLEFAQNLYDTTSVDRINVLLGDGMLTEPMRATLRNELAARG 256
Query: 346 ISARAVNWERGMAMYYSAIEGT-RILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTM 404
+ W ++ +Y+ ++ ++F+ I+ +V++ ++NT+ +A+M+R+ EIGT+
Sbjct: 257 LEVEIKTWNE-LSTFYTKVKNMFDVIFLFAFLIVFTIVVMSVINTVGMAIMERTREIGTL 315
Query: 405 RAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLAL 438
RA+G K+ + +F ES + +G L+G++L L
Sbjct: 316 RALGVKRRGIVGLFALESMLLGLIGSLVGVLLTL 349
>gi|94267998|ref|ZP_01291055.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
gi|93451770|gb|EAT02530.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
Length = 388
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 375 LAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+A++++V+ V +MN++++AV +RS EIG MRAIGA + + +I E+ ++ G L G
Sbjct: 261 IALVALVIGAVGVMNSILMAVFERSQEIGMMRAIGASRWNIFQIIIKETTILTISGGLAG 320
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+V+A+ ++++ F R + + G + + + +A A L+ GL A YP
Sbjct: 321 IVIAVFGSSLIENFVRRT---MPYVPSGDMLHFDLGLAAACLGFA--LVVGLLAGLYPAW 375
Query: 494 LALKISPLEAI 504
A +I+P+EAI
Sbjct: 376 KASRINPIEAI 386
>gi|16080093|ref|NP_390919.1| hypothetical protein BSU30410 [Bacillus subtilis subsp. subtilis
str. 168]
gi|2293174|gb|AAC00252.1| YtrF [Bacillus subtilis]
gi|2635525|emb|CAB15019.1| ytrF [Bacillus subtilis subsp. subtilis str. 168]
Length = 436
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 327 SSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVI 386
+ K ++V + ND ++G +V E A + + ++F+ +A+ ++ I I
Sbjct: 256 ADKFENVEQLTND-LTDDGYYVTSVTTELEGANTFFMVFKIGLIFVGCIAV--IISAIGI 312
Query: 387 MNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNA 446
NT+ +AV +R+ EIG M+AIGA +R++F ES ++ +G +IG++++ + +VN
Sbjct: 313 FNTMTMAVTERTQEIGIMKAIGASPSIIRRMFLMESAYIGILGCVIGIIISYGVSYLVN- 371
Query: 447 FDIRVGDILAAMFGGKQIRVSIS---IGSAVWTMAAMLLAGLA--ANWYPVRLALKISPL 501
+ V ILAA GG ++ + I +++ +A ++ G+A + P R A K + L
Sbjct: 372 --LAVPMILAATSGGDAGDLNYTFSYIPASLVIIAVVICGGVAVISGMNPARKATKTNVL 429
Query: 502 EAINR 506
A+ R
Sbjct: 430 TALRR 434
>gi|108757413|ref|YP_634527.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
1622]
gi|108461293|gb|ABF86478.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
1622]
Length = 408
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
Query: 282 DIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWF 341
DI+D N + + L +L +L D + +++ L D + T+ L
Sbjct: 187 DIVDDFNTGNVGTNDKFLYLPFDLAK--SLYDFDGAERLIVLLDDKAFTEQARTELTAQL 244
Query: 342 KEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEI 401
K+ G W + Y ++F + + + +VV++ I+N++ + V++R+ EI
Sbjct: 245 KQAGFDVELKTWLELSSFYSQVKRLFDMIFAFIFSNVFIVVVMSIVNSMSMTVVERTREI 304
Query: 402 GTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDI-----RVGDILA 456
GT+R++G ++ + ++F E+F + +G GL+ L+ VN+ I ++++
Sbjct: 305 GTLRSMGLRRSGILRLFTTEAFMLVVLGCAGGLLFTLLVRLAVNSAGITYTPPNSSNVVS 364
Query: 457 AMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
M V + + T + L G+AA ++P R A +
Sbjct: 365 LM-------VDLDVPRMARTFVMLSLLGIAAAFFPARTAAR 398
>gi|119896348|ref|YP_931561.1| hypothetical protein azo0056 [Azoarcus sp. BH72]
gi|119668761|emb|CAL92674.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 465
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 19/155 (12%)
Query: 360 YYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFF 419
Y + R LF + +++VV L + NT+ +AV +R+ EIG++RAIG + +R++F
Sbjct: 317 YNQVVRMFRTLFGFVSLLMAVVTLFAVANTVNMAVSERTGEIGSLRAIGLPRARIRRMFV 376
Query: 420 AESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFG----GKQIRVSISI---GS 472
E + G ++G+ LA++ A G I A F G V I+I GS
Sbjct: 377 LEGGLVGAFGAVLGVALAVVLAG---------GLINHAGFSWTPPGNITPVPITIDVQGS 427
Query: 473 A---VWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
A + T+ AM L ++W+P R A ++ +EA+
Sbjct: 428 ARLCLGTVLAMTLIACISSWWPARRAARLEIVEAL 462
>gi|122064312|sp|Q2KVS6|MACB_BORA1 Macrolide export ATP-binding/permease protein macB
Length = 655
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 13/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L ++M+A++S+VV+ I +MN ++V+V +R+ EIG A+GA++ + + F E+
Sbjct: 525 ATLTLLVSMIAVISLVVVGIGVMNIMLVSVTERTREIGVRMAVGARRSDIMQQFLIEAVL 584
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ +G ++G++L+L +V+ A G Q+ S GS V L G
Sbjct: 585 VCLIGGVLGILLSLSIGVLVS----------QATRGAFQMLY--SSGSMVLAFVCSTLIG 632
Query: 485 LAANWYPVRLALKISPLEAINR 506
+A + P R A ++ P+E++ R
Sbjct: 633 VAFGFLPARSAARLDPVESLAR 654
>gi|115423873|emb|CAJ50424.1| putative macrolide-specific ABC-type efflux carrier [Bordetella
avium 197N]
Length = 655
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 13/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L ++M+A++S+VV+ I +MN ++V+V +R+ EIG A+GA++ + + F E+
Sbjct: 525 ATLTLLVSMIAVISLVVVGIGVMNIMLVSVTERTREIGVRMAVGARRSDIMQQFLIEAVL 584
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ +G ++G++L+L +V+ A G Q+ S GS V L G
Sbjct: 585 VCLIGGVLGILLSLSIGVLVS----------QATRGAFQMLY--SSGSMVLAFVCSTLIG 632
Query: 485 LAANWYPVRLALKISPLEAINR 506
+A + P R A ++ P+E++ R
Sbjct: 633 VAFGFLPARSAARLDPVESLAR 654
>gi|15641884|ref|NP_231516.1| hypothetical protein VC1882 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|116189222|ref|ZP_01478978.1| hypothetical protein VchoM_02001862 [Vibrio cholerae MO10]
gi|121587298|ref|ZP_01677070.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727121|ref|ZP_01680295.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674975|ref|YP_001217415.1| hypothetical protein VC0395_A1472 [Vibrio cholerae O395]
gi|153222974|ref|ZP_01953564.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|153818866|ref|ZP_01971533.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823447|ref|ZP_01976114.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|9656413|gb|AAF95030.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
str. N16961]
gi|121548458|gb|EAX58516.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630499|gb|EAX62891.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124118475|gb|EAY37218.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|125618209|gb|EAZ46752.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|126510594|gb|EAZ73188.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126519036|gb|EAZ76259.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316858|gb|ABQ21397.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 414
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 309 LNLADNEAWHH-------IVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYY 361
L L D +A+ H I +K+ D + +++ + + E +W++ Y
Sbjct: 206 LPLEDAQAYAHLGSGVTGISVKVADVLQATQIVRDVGNQLNE---YVYLHSWQQKYGFLY 262
Query: 362 SAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAE 421
I+ R + ++ ++ V I++TL++AV R+ EI +R +GA G +++IF +
Sbjct: 263 RDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAGEIAILRTMGATDGLIKRIFVWQ 322
Query: 422 SFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAML 481
F +G ++G VL ++ A + + ++ F I + S V +L
Sbjct: 323 GVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQFLSGDIYFVDFLPSQVEWADVVL 382
Query: 482 LAGLA------ANWYPVRLALKISPLEAIN 505
++G A A WYP R A +++P + ++
Sbjct: 383 VSGTAIVLSLLATWYPARRASRLNPAQVLS 412
>gi|153856020|ref|ZP_01996933.1| hypothetical protein DORLON_02959 [Dorea longicatena DSM 13814]
gi|149751741|gb|EDM61672.1| hypothetical protein DORLON_02959 [Dorea longicatena DSM 13814]
Length = 467
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 376 AILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLV 435
A+ +V I I NT+++++ +R+ EIG M+ +G +R++F E+ F+ +G + G +
Sbjct: 339 AVSLLVAAIGIANTMMMSIYERTKEIGVMKVLGCSLRNIREMFLLEAAFIGLLGGIAGNI 398
Query: 436 LALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLA 495
L+ + +A +N I VG A G I + +M +L G+ A ++P + A
Sbjct: 399 LSFVMSAAIN---IIVGSSGAMSMGTDSTISYIPWWLVLMSMVFAVLVGVLAGYFPAKRA 455
Query: 496 LKISPLEAI 504
+K+SPL AI
Sbjct: 456 MKLSPLAAI 464
>gi|15896818|ref|NP_350167.1| Predicted permease [Clostridium acetobutylicum ATCC 824]
gi|15026680|gb|AAK81507.1|AE007854_14 Predicted permease [Clostridium acetobutylicum ATCC 824]
Length = 440
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 34/218 (15%)
Query: 315 EAWHHIVIKLKDSSKTQSVIKTLNDWFKEEG---ISARAVNWE---------RGMAMYYS 362
EA + I+ ++ ++K +S +D+ K G I A N E + M YY
Sbjct: 229 EADNQIMASIELTNKIKSYYTFQDDYLKSNGYESIVIIAKNTENTLSIGKSIKNMGYYYV 288
Query: 363 A----IEGTRILFITMLAILSVVVLIV-------IMNTLVVAVMQRSSEIGTMRAIGAKK 411
+ ++ ++ + M AIL+V+ LIV I+NT+ + + +R+ IG M+++GA +
Sbjct: 289 SYQDIVKRSQNSYKIMEAILAVLGLIVLFVAAIGIVNTMTMVIYERTKSIGIMKSMGANR 348
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
G +R IF ++ M +G +IGL+ + I +V ++G L A + I+ S+ I
Sbjct: 349 GEIRSIFILQAGIMGVLGGVIGLIFSFINVKIV-----QLG--LNAYLRSRNIKESLDIV 401
Query: 472 SAVW----TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
W T+A + + A YP A ++ P++A+N
Sbjct: 402 MPYWLVIGTLAFSIFIAVLAGMYPSGKASRMDPVDALN 439
>gi|121609498|ref|YP_997305.1| protein of unknown function DUF214 [Verminephrobacter eiseniae
EF01-2]
gi|121554138|gb|ABM58287.1| protein of unknown function DUF214 [Verminephrobacter eiseniae
EF01-2]
Length = 441
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 249 TMGARVAAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDR 308
T+GA +A + S D + + + ++ + + V S K DY++ + L+
Sbjct: 183 TIGAGLARGLAVSYDSQIDMLAINPAGGQNAMSAHVRGVMESGIK-DYDDRVLKMPLKTA 241
Query: 309 LNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTR 368
L + + I++ L ++ +T + +E G+ W Y +
Sbjct: 242 QTLLETKEVSKIIVLLNETDRTAQAQARIERVIEERGLQLETRPWSSLAVFYDQVVNLFN 301
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
+F + I+S +V+ +I NT+++ V++R+ EIGT+RAIG + V ++F E M V
Sbjct: 302 GIFFFIKTIVSTIVVFMISNTMMMNVLERTREIGTLRAIGLTEREVSRLFLLEGVIMGFV 361
Query: 429 GVLIGLVLALIAAAVVN 445
G ++ + + + A ++N
Sbjct: 362 GAVLSIAVGIALAELIN 378
>gi|56962482|ref|YP_174208.1| antimicrobial peptide ABC transporter permease [Bacillus clausii
KSM-K16]
gi|56908720|dbj|BAD63247.1| antimicrobial peptide ABC transporter permease [Bacillus clausii
KSM-K16]
Length = 820
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 362 SAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAE 421
SA+ G L ML ++ + I NTLV+ M+R +EIGTMRA+G K VRK+ AE
Sbjct: 685 SAVSGMNELISVMLFMMIGLASIGTANTLVMNTMERITEIGTMRALGFTKQQVRKMIMAE 744
Query: 422 SFFMSCVGVLIGLVLALIAAAVVN---------AFDIRVGDILAAMFGGKQIRVSISIGS 472
F + GV+IG+ + ++ V + +F + VG+++ A+ G + +S+G+
Sbjct: 745 GFLIGLAGVVIGMAIGVLLIFVTSQSEIMEGFMSFQLPVGNMVLALIAG----IGLSLGA 800
Query: 473 A 473
A
Sbjct: 801 A 801
>gi|154148848|ref|YP_001406500.1| lipoprotein release system transmembrane protein [Campylobacter
hominis ATCC BAA-381]
gi|153804857|gb|ABS51864.1| lipoprotein release system transmembrane protein [Campylobacter
hominis ATCC BAA-381]
Length = 396
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 334 IKTLNDWFKEEGISARAVNWERGMAMYYSAIE-GTRILFITMLAILSVVVLIVIMNTLVV 392
IK +N+ + +ARA+ W ++SA+ R LFI ++ I+ +V + I+++L++
Sbjct: 228 IKKINEILPQ---TARAIGWWEQNGNFFSALALEKRALFIVLMLII-LVASLNIVSSLLM 283
Query: 393 AVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVG 452
VM R EI + ++GA K V++ FF + G++ GL+L L ++ FDI
Sbjct: 284 TVMNRRQEIALLLSLGASKKEVKQTFFRLGAVIGGSGIIFGLILGLFGVWLLGNFDIV-- 341
Query: 453 DILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ A ++G ++ + +S + ++ L +++YP + A ++ L+ +
Sbjct: 342 KLPADVYGSSKLPMELSFSDLAMILGGAIVIVLISSFYPAKKATQVDVLDTL 393
>gi|118075120|ref|ZP_01543262.1| protein of unknown function DUF214 [Shewanella woodyi ATCC 51908]
gi|118020440|gb|EAV34302.1| protein of unknown function DUF214 [Shewanella woodyi ATCC 51908]
Length = 277
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 319 HIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
H+ + L D +S+ + + FK +GI +W +SA++ + + ML+++
Sbjct: 91 HLRLYLADPFNAESLSSEVTNLFKRQGIEVTTSDWRDTYGHLFSAVKMEKNMMSLMLSLI 150
Query: 379 SVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLAL 438
V I++ LV+ V+ +++++ ++ G V IF + + +G+++GL++ +
Sbjct: 151 IAVAAFNIVSALVMMVVDKTTDVAVLKTQGLSTANVMGIFIFQGSLNAIIGLVLGLIIGV 210
Query: 439 IAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKI 498
+N VG ++ + G+ + V I W + L+ A YP A K+
Sbjct: 211 GLTLNLNTMMNSVG--ISILGAGQSLPVQIEWSQMSWIVIGTLVITFCATLYPAFRAAKV 268
Query: 499 SPLEAI 504
P A+
Sbjct: 269 QPATAL 274
>gi|115376580|ref|ZP_01463811.1| efflux ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
gi|115366385|gb|EAU65389.1| efflux ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
Length = 535
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 82/354 (23%), Positives = 163/354 (46%), Gaps = 39/354 (11%)
Query: 183 DLKEKFEKYYDR--PL------NLGDEILVTAFA--GKARQQKVIITGFFDYAHPDTA-- 230
+L ++E++Y + PL +GD + +T+F G + V I G + + + +
Sbjct: 185 NLVTRYEQFYAQLVPLLDLYRIRMGDSLTITSFTRTGYVQNVNVPIYGTYQFNGLEKSPL 244
Query: 231 IDGIAYFDVDTTRILADMTMGARVA--AAIPDSVDLS--LSEKSEDELFADDSGADII-- 284
+ D+ + R L ++A A + + L+ E +E+ LF +++ + ++
Sbjct: 245 AGSVNLMDLVSFRELYGYLTADKLAEIAQLQEKSGLTEVKRENAEEALFGEEAPSTLVAN 304
Query: 285 ---------DTVQNSNSKIDYENLL----GSTELRDRLNLADNEAWHHIVIKLKDSSKTQ 331
+ +Q+ + + E+LL EL D + L+ I LKD SK +
Sbjct: 305 ATPGLINENEQIQSEATALRKEDLLKRVYSKKELEDGMVLS-------AAIILKDPSKLE 357
Query: 332 SVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLV 391
S + L + + R V+W++ + + + +++ ++ IL VVVL +I N ++
Sbjct: 358 STLAELQQSPEVKDAKLRVVSWQKAVGLIGQFVLLMKMVLWGVIVILFVVVLAIINNAVM 417
Query: 392 VAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDI-R 450
+A +QR E+GTMRAIGA++ F+ + E+ + V G L + + I
Sbjct: 418 MATLQRVREVGTMRAIGAQRTFILSMILLETVVLGLVFGGAGAGLGSGLISYLGRVGIPA 477
Query: 451 VGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
V D L F G ++ +S G+ + ++ + + YP LA ++SP+ A+
Sbjct: 478 VSDELYFFFSGPRLLPFLSPGNFITAFLLVVGVSIFSTLYPAFLATRVSPVTAM 531
>gi|20090527|ref|NP_616602.1| hypothetical protein MA1674 [Methanosarcina acetivorans C2A]
gi|19915553|gb|AAM05082.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 389
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 319 HIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
+I +++ D + +++ ++ EE AV+W A + ++ T+++F+ + +L
Sbjct: 208 NIGVRVADPYQAEAIAASI-----EEETGLDAVSWSEANAEILNLLD-TQMVFVNIFYLL 261
Query: 379 SV-VVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
+ I NTL+ V QR+ EIG ++A+GA + + +F +S + +G+++G++L
Sbjct: 262 IYGIAGFGIANTLITIVAQRTREIGILKAMGASQKSIMVVFLFQSLVLGAIGLVLGIILG 321
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
I + ++I V + FG + + + + + V+ + + + YP R A K
Sbjct: 322 YIVTIALQNYEIEVPQEM--YFGLQTLPLEVKPLNFVYAAFFAFIVNIISGIYPARKAAK 379
Query: 498 ISPLEAI 504
+ P++AI
Sbjct: 380 LDPVKAI 386
>gi|41614969|ref|NP_963467.1| hypothetical protein NEQ175 [Nanoarchaeum equitans Kin4-M]
gi|40068693|gb|AAR39028.1| NEQ175 [Nanoarchaeum equitans Kin4-M]
Length = 381
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 10/151 (6%)
Query: 357 MAMYYSAIEGTRILFITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVR 415
+A ++++ G LFI+ +A +S++ I+ IMNT+ + + +R SEIG +RAIGAKK +
Sbjct: 239 LAKRFASLLGFVSLFISAIAGISLINAIIGIMNTMYMVITERISEIGILRAIGAKKRDIL 298
Query: 416 KIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVW 475
+F ES F+S VG ++G+ ++ I A + +G A+F I I +G V
Sbjct: 299 FLFLFESGFLSLVGGIVGIAISTIIALITIIVFKSMG--FKAIF---YINPLIVLGLLVL 353
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAINR 506
+ ++AGL P + A ++ P++A+ R
Sbjct: 354 SFVVGIIAGL----LPSKKASELEPVKALRR 380
>gi|118474523|ref|YP_891767.1| permease, putative [Campylobacter fetus subsp. fetus 82-40]
gi|118413749|gb|ABK82169.1| permease, putative [Campylobacter fetus subsp. fetus 82-40]
Length = 399
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 322 IKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIE-GTRILFITMLAILSV 380
I + + Q +IK LND +AV W ++SA+ R LFI ++ I+ V
Sbjct: 220 IHIYSQNPKQDIIK-LNDILPP---GQKAVGWWEQNGNFFSALALEKRALFIVLMLIILV 275
Query: 381 VVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIA 440
L +I ++L++ VM R EI + A+GA K ++K FF + + G+L GL L L
Sbjct: 276 ASLNII-SSLLMTVMNRRQEIALLLALGASKNEIKKSFFTQGLCIGGSGILFGLALGLFG 334
Query: 441 AAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
++ +FDI ++ A ++G ++ + +S+ + + +++YP + A +
Sbjct: 335 VWLLGSFDII--NLPADVYGSSKLPMELSLSDLSMIIIGAIFIVAFSSYYPAKKASNVDI 392
Query: 501 LEAI 504
L +
Sbjct: 393 LTTL 396
>gi|57240551|ref|ZP_00368500.1| conserved hypothetical integral membrane protein [Campylobacter
lari RM2100]
gi|57018892|gb|EAL55665.1| conserved hypothetical integral membrane protein [Campylobacter
lari RM2100]
Length = 400
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 101/180 (56%), Gaps = 9/180 (5%)
Query: 327 SSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIE-GTRILFITMLAILSVVVLIV 385
S+K IK + D+ G ++ W +++A+ R LFI ++ I+ +V +
Sbjct: 225 SNKPFEDIKQIEDFL---GARYASIGWWEQNGNFFAALALEKRALFIVLMLII-LVASLN 280
Query: 386 IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVN 445
I+++L++ VM R SEI + ++GA K ++K FF+ F + G++ G++LA IA V+
Sbjct: 281 IVSSLLMIVMNRRSEIALLLSLGASKLEIKKTFFSLGFLIGGSGIIAGVILAAIALWVLG 340
Query: 446 AFDIRVGDILAAMFGGKQIRVSISIGSAVWTM-AAMLLAGLAANWYPVRLALKISPLEAI 504
FDI + + ++G ++ + +S+ T+ A+++ GL++ +YP + A ++ L+ +
Sbjct: 341 NFDII--SLPSDVYGMSKLPLELSLVDFCATLFGAIVIVGLSS-YYPAKKATQVDILDTL 397
>gi|154174987|ref|YP_001408405.1| PglC [Campylobacter curvus 525.92]
gi|112802928|gb|EAU00272.1| PglC [Campylobacter curvus 525.92]
Length = 399
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 349 RAVNWERGMAMYYSAIE-GTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAI 407
+A+ W + ++SA+ R LFI ++ I+ V L +I ++L++ VM R EI + A+
Sbjct: 243 KAIGWWQQNGNFFSALALEKRALFIVLMLIILVASLNII-SSLLMTVMNRRQEIALLLAL 301
Query: 408 GAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVS 467
GA K +++ FF + + G++ GLVL + ++ F+I ++ A ++G ++ +
Sbjct: 302 GASKNEIKQSFFYQGLVIGGSGIVFGLVLGFVGMWLLGNFNII--NLPADVYGTSKLPME 359
Query: 468 ISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+S+ +A +L +++YP + A +I L+ +
Sbjct: 360 LSLLDFAMIVAGAVLIVAVSSYYPAKKATQIDVLQTL 396
>gi|66045854|ref|YP_235695.1| ABC transporter:Protein of unknown function DUF214 [Pseudomonas
syringae pv. syringae B728a]
gi|81308199|sp|Q4ZT65|MACB2_PSEU2 Macrolide export ATP-binding/permease protein macB 2
gi|63256561|gb|AAY37657.1| ABC transporter:Protein of unknown function DUF214 [Pseudomonas
syringae pv. syringae B728a]
Length = 653
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 282 DIIDTVQNSNSKIDYEN----LLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTL 337
+I DT +N N + YE LLG T L I +++KD ++ V +
Sbjct: 447 NIFDTSKNLNIWMPYETASGRLLGQTYLDG------------ITVRVKDGQPSKVVEDNV 494
Query: 338 NDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVA 393
N ++ + + M ++ T +L++++V+ L V +MN ++V+
Sbjct: 495 NKLLQKRHGTKDFFTYNLDSVM--QTVQKTSQSLALLLSLIAVISLAVGGIGVMNIMLVS 552
Query: 394 VMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGD 453
V +R+ EIG A+GA++ +R+ F E+ + +G +IG+ L+ + V F + V
Sbjct: 553 VTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLIGGVIGISLSFVIGYV---FSLLV-- 607
Query: 454 ILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAINR 506
K+ ++ S+GS V L G+ + P R A ++ P+EA+ R
Sbjct: 608 --------KEWQMVFSLGSIVTAFICSTLIGIVFGFVPARNAAQLDPIEALAR 652
>gi|46143385|ref|ZP_00135343.2| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|126208108|ref|YP_001053333.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae L20]
gi|126096900|gb|ABN73728.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae L20]
Length = 640
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 122/247 (49%), Gaps = 20/247 (8%)
Query: 263 DLSLSEKSEDE-LFADDSGADIIDTVQNSNS--KIDYENLLGSTELRDRLNLADNEAWHH 319
DL L++ E + + D +I Q SN+ + + + T L R+ + +
Sbjct: 406 DLGLTDPVEGKVILVDKKPLTVIGMAQESNNLNQTSLKMWMPYTTLMQRI--SGEKFIDS 463
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
+ +K+KD+ ++Q+ K++N+ + G V + ++ T L I+ +A++
Sbjct: 464 LTVKVKDNVESQTAEKSINELLTAKHGKKDFFVMNSDTIKQTITSTTNTMKLLISSIAMI 523
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S++V I +MN ++V+V +R+ EIG AIGAK+ + + F E+ + +G +IG++ A
Sbjct: 524 SLIVGGIGVMNIMLVSVTERTKEIGVRMAIGAKQNNILQQFLIEAILICLLGGIIGILFA 583
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
+ A++ +F+ G ++ +S S V + L G+ + P + A K
Sbjct: 584 M---AIIFSFNTL----------GTNFKMILSPASVVLAVFCSTLIGVVFGYMPAKNASK 630
Query: 498 ISPLEAI 504
++P+ A+
Sbjct: 631 LNPITAL 637
>gi|148653631|ref|YP_001280724.1| ABC transporter related [Psychrobacter sp. PRwf-1]
gi|148572715|gb|ABQ94774.1| ABC transporter related [Psychrobacter sp. PRwf-1]
Length = 696
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 367 TRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM 425
T L I+ +AI+S+VV I +MN ++V+V +R++EIG A+GA++ + + F E+ +
Sbjct: 567 TMTLLISSIAIISLVVGGIGVMNIMLVSVTERTNEIGVRMAVGARQSDIMQQFLIEAVLV 626
Query: 426 SCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGL 485
+G +G++LA + +N+ G V S S V L G+
Sbjct: 627 CVLGGALGVLLAFMIGEAINS------------LGSDSFSVIYSPTSIVAAFICSTLIGV 674
Query: 486 AANWYPVRLALKISPLEAINR 506
+ P R A K++P+EA++R
Sbjct: 675 VFGFLPARNAAKLNPVEALSR 695
>gi|94971657|ref|YP_593705.1| ABC efflux pump, inner membrane subunit [Acidobacteria bacterium
Ellin345]
gi|94553707|gb|ABF43631.1| ABC efflux pump, inner membrane subunit [Acidobacteria bacterium
Ellin345]
Length = 419
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
+LFI ML + + + +MN ++V+V +R EIG RA+GAKK ++ F AE+ + +
Sbjct: 284 LLFIGMLTL--GIGGVGVMNIMLVSVDERIREIGLRRALGAKKWHIKLQFLAETMLLMLM 341
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +IG+ L+ + + V + +G + G I + ISI + + + A +++ G+A+
Sbjct: 342 GGVIGIGLSYLLSWAVGTLPL-LGPLFEDDSGKGDIHLHISIFTVLLSTAVLVVTGIASG 400
Query: 489 WYPVRLALKISPLEAI 504
P A ++ P+EA+
Sbjct: 401 LVPAFKASRLDPVEAL 416
>gi|28900079|ref|NP_799734.1| putative ABC transporter, ATP-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|81839699|sp|Q87JM4|MACB_VIBPA Macrolide export ATP-binding/permease protein macB
gi|28808362|dbj|BAC61567.1| putative ABC transporter, ATP-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
Length = 654
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L I+ +A++S++V I +MN ++V+V +R+ EIG A+GA++ + + F E+
Sbjct: 525 ATMTLLISAIAVISLIVGGIGVMNIMLVSVTERTKEIGVRMAVGARQADILRQFLIEAVL 584
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ G + G+ LA + A G ++ S+ S +W L G
Sbjct: 585 VCLCGGIAGIGLAFLIG-------------FAFSTSGSSFQMIYSMNSIIWAFICSTLIG 631
Query: 485 LAANWYPVRLALKISPLEAINR 506
+A + P R A K+ P+EA+ R
Sbjct: 632 IAFGFLPARNAAKLDPIEALAR 653
>gi|21228952|ref|NP_634874.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
gi|20907489|gb|AAM32546.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
Length = 405
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 342 KEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSV-VVLIVIMNTLVVAVMQRSSE 400
+E G++A V+W A +E T+++F+ + +L + I NTL+ V QR+ E
Sbjct: 244 RETGLNA--VSWSEANAEILGLLE-TQMVFVNIFYLLIYGIAGFGIANTLITIVAQRTRE 300
Query: 401 IGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFG 460
IG ++A+GA + + IF +S + +G+++G VL I + + I V + FG
Sbjct: 301 IGILKAMGASQKSIMVIFIFQSLVLGAIGLVLGTVLGYITIVALQNYKIEVPQEM--YFG 358
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + + + + V+ + + + YP R A K+ P++AI
Sbjct: 359 LQTLPLEVEALNFVYAAFFAFIVNILSGIYPARKASKLDPVKAI 402
>gi|153837027|ref|ZP_01989694.1| macrolide-specific ABC-type efflux carrier [Vibrio parahaemolyticus
AQ3810]
gi|149749615|gb|EDM60360.1| macrolide-specific ABC-type efflux carrier [Vibrio parahaemolyticus
AQ3810]
Length = 654
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L I+ +A++S++V I +MN ++V+V +R+ EIG A+GA++ + + F E+
Sbjct: 525 ATMTLLISAIAVISLIVGGIGVMNIMLVSVTERTKEIGVRMAVGARQADILRQFLIEAVL 584
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ G + G+ LA + A G ++ S+ S +W L G
Sbjct: 585 VCLCGGIAGIGLAFLIG-------------FAFSTSGSSFQMIYSMNSIIWAFICSTLIG 631
Query: 485 LAANWYPVRLALKISPLEAINR 506
+A + P R A K+ P+EA+ R
Sbjct: 632 IAFGFLPARNAAKLDPIEALAR 653
>gi|39995783|ref|NP_951734.1| ABC transporter, permease protein, putative [Geobacter
sulfurreducens PCA]
gi|39982547|gb|AAR34007.1| ABC transporter, permease protein, putative [Geobacter
sulfurreducens PCA]
Length = 387
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 25/249 (10%)
Query: 265 SLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKL 324
S K DE+ + + ++ + SK D L + ++ A ++ + +K+
Sbjct: 154 SFGLKPGDEVTIRGTRLPVKGVLKETGSKDDTTLFLALSVAQELFKAAGKASF--VAVKV 211
Query: 325 KDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLI 384
D S+T I + +E ++A V+ ++ M I GT + + ++A +SV+
Sbjct: 212 DDLSRTDDYIMKI-----KETVNAGVVS-DKQMLKSVLGIIGTVNVTLQLIAAISVLAAA 265
Query: 385 V-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAV 443
I+NT++ A +R EIG ++AIGA++ + IF ES F +G + G+ L A+ +
Sbjct: 266 FGIVNTMMTATYERRREIGILQAIGARRREIFAIFLMESGFYGLLGGICGVAGGLAASIL 325
Query: 444 V------NAFDIRV-GDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
V NAF V G+ AA+ K + +GS +++A L+AGL YP A
Sbjct: 326 VGPMVNQNAFLAFVKGNDPAAVLDPK-----LMVGSVAFSVAVALVAGL----YPAWRAA 376
Query: 497 KISPLEAIN 505
+++P+EAI+
Sbjct: 377 RLTPVEAIS 385
>gi|83644121|ref|YP_432556.1| ABC-type antimicrobial peptide transport system, permease component
[Hahella chejuensis KCTC 2396]
gi|83632164|gb|ABC28131.1| ABC-type antimicrobial peptide transport system, permease component
[Hahella chejuensis KCTC 2396]
Length = 404
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 22/149 (14%)
Query: 361 YSAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFF 419
+ I T L + +A +S+ V ++IMN ++++V QR++EIG ++A+GA VR++F
Sbjct: 267 FDEILRTLTLAVGGIAGISLAVAGVLIMNVMLISVSQRTAEIGLLKALGASAATVRRLFL 326
Query: 420 AESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVW---- 475
+E+ ++ +G LIGL+++ A G+ + I +GS VW
Sbjct: 327 SEALLLAIIGSLIGLLISETLLAT-----------------GRLLYDQIPLGSPVWVKIA 369
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAI 504
++ ++ L + P R A ++P+EA+
Sbjct: 370 AVSVAIVTALLFAYLPARKAAALAPVEAL 398
>gi|84386594|ref|ZP_00989620.1| putative ABC transporter, integral membrane protein [Vibrio
splendidus 12B01]
gi|84378400|gb|EAP95257.1| putative ABC transporter, integral membrane protein [Vibrio
splendidus 12B01]
Length = 414
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 315 EAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITM 374
EA + +K+ D S+++ + + + +W++ Y I+ R + +
Sbjct: 219 EAVTGVSLKVTDVLNANSIVREVGNQLD---VYVYLRSWQQKFGFLYRDIQLVRTIMYLV 275
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM----SCVGV 430
+ ++ V I++TL++AV R+SEI +R +GA G V++IF + F S VG
Sbjct: 276 MVLVIGVACFNIVSTLMMAVKDRASEIAILRTMGASDGLVKRIFVWQGVFSGVLGSLVGS 335
Query: 431 LIGLVLALIAAAVVNAFDIRV------GDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
IG+++AL ++ + V GDI F Q+ ++ V ++
Sbjct: 336 AIGVLVALNLTTLIKGLETLVDHQFLSGDIYFVDFLPSQLDMT----DVVVVSGTAIVLS 391
Query: 485 LAANWYPVRLALKISPLEAIN 505
L A WYP A K++P ++
Sbjct: 392 LLATWYPASRAAKLNPASVLS 412
>gi|86146941|ref|ZP_01065259.1| hypothetical protein MED222_19604 [Vibrio sp. MED222]
gi|85835191|gb|EAQ53331.1| hypothetical protein MED222_19604 [Vibrio sp. MED222]
Length = 414
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 315 EAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITM 374
EA + +K+ D S+++ + + + +W++ Y I+ R + +
Sbjct: 219 EAVTGVSLKVTDVLNANSIVREVGNQLD---VYVYLRSWQQKFGFLYRDIQLVRTIMYLV 275
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM----SCVGV 430
+ ++ V I++TL++AV R+SEI +R +GA G V++IF + F S VG
Sbjct: 276 MVLVIGVACFNIVSTLMMAVKDRASEIAILRTMGASDGLVKRIFVWQGVFSGVLGSLVGS 335
Query: 431 LIGLVLALIAAAVVNAFDIRV------GDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+IG+++AL ++ + V GDI F Q+ ++ V ++
Sbjct: 336 VIGVLVALNLTTLIKGLERLVDHQFLSGDIYFVDFLPSQLDMT----DVVVVSGTAIVLS 391
Query: 485 LAANWYPVRLALKISPLEAIN 505
L A WYP A K++P ++
Sbjct: 392 LLATWYPASRAAKLNPASVLS 412
>gi|91224239|ref|ZP_01259502.1| putative ABC transporter, ATP-binding protein [Vibrio alginolyticus
12G01]
gi|91191150|gb|EAS77416.1| putative ABC transporter, ATP-binding protein [Vibrio alginolyticus
12G01]
Length = 654
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L I+ +A++S++V I +MN ++V+V +R+ EIG A+GA++ + + F E+
Sbjct: 525 ATMTLLISAIAVISLIVGGIGVMNIMLVSVTERTKEIGVRMAVGARQADILRQFLIEAVV 584
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ G + G+ LA + A G ++ S+ S +W L G
Sbjct: 585 VCLCGGIAGIGLAFLIG-------------FAFSTSGSSFQMIYSMNSIIWAFICSTLIG 631
Query: 485 LAANWYPVRLALKISPLEAINR 506
+A + P R A K+ P+EA+ R
Sbjct: 632 IAFGFLPARNAAKLDPIEALAR 653
>gi|154490311|ref|ZP_02030572.1| hypothetical protein PARMER_00544 [Parabacteroides merdae ATCC
43184]
gi|154088922|gb|EDN87966.1| hypothetical protein PARMER_00544 [Parabacteroides merdae ATCC
43184]
Length = 406
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 359 MYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIF 418
M S + +L + I +V I IMN + V+V +R+ EIG +IGAK + F
Sbjct: 272 MLTSTTDMMTVLLAAVAGISLLVGGIGIMNIMYVSVTERTREIGLRMSIGAKGIDILAQF 331
Query: 419 FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMA 478
ES +S G LIG+V + AA VVN G + I S V + A
Sbjct: 332 LIESILISVTGGLIGVVFGVGAALVVN--------------GVAHFPIYIQPWSVVLSFA 377
Query: 479 AMLLAGLAANWYPVRLALKISPLEAI 504
+ G+ WYP + A ++ P+EAI
Sbjct: 378 VCTVTGVFFGWYPAKKAAQLDPIEAI 403
>gi|154687162|ref|YP_001422323.1| YtrF [Bacillus amyloliquefaciens FZB42]
gi|154353013|gb|ABS75092.1| YtrF [Bacillus amyloliquefaciens FZB42]
Length = 436
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 343 EEGISARAVNWE-RGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEI 401
++G R+V E +G+ ++ + ++F+ +A+ V+ I I NT+ +AV +R+ EI
Sbjct: 270 DDGFYVRSVTTELKGVNTFFLVFK-IGLIFVGFIAV--VISAIGIFNTMTMAVTERTQEI 326
Query: 402 GTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAM--- 458
G M+AIGA +R++F ES ++ +G +IG++ I+ V A ++ V IL A+
Sbjct: 327 GIMKAIGASPSIIRRMFLMESAYIGILGSVIGII---ISYGVSFAVNLAVPVILKAVGGN 383
Query: 459 FGGKQIRVSIS-IGSAVWTMAAMLLAGLA--ANWYPVRLALKISPLEAINR 506
G + + + S I ++ +A ++ AG+A + P R A K + L A+ R
Sbjct: 384 TGAEDLHYTFSYIPLSLVVIAVVICAGVAVISGMNPARKATKTNVLTALRR 434
>gi|24373810|ref|NP_717853.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
oneidensis MR-1]
gi|24348205|gb|AAN55297.1|AE015667_7 lipoprotein releasing system transmembrane protein LolE [Shewanella
oneidensis MR-1]
Length = 410
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 80/432 (18%), Positives = 168/432 (38%), Gaps = 83/432 (19%)
Query: 74 QLLGVFQTVSVSMDTPKMPYLVPFEKVKSKVESLPDVKGLTPSVFASGMLKALDLPDSWE 133
++LG ++V P + + EK+ LP V+G+TPSV M+++
Sbjct: 58 RILGAVPQLTVYTKAPLSDWTIAAEKLTM----LPGVQGVTPSVSTQAMVQS-------- 105
Query: 134 AEDKNRSFLPYAQILGIEPESYKNLFDTI-NIYEGEYPKTSNGKFALIPRDLKEKFEKYY 192
+ + Q+ G+ PE + L + Y G + + ++G++ +I
Sbjct: 106 -----AANIRAVQVFGVFPELAEKLSAVAQHTYSGAFSELTSGQYQVI------------ 148
Query: 193 DRPLNLGDEILVTAFAGKARQQKVIITGFFDYAHPDTAIDGIAYFDVDTTRILADMTMGA 252
LG E+ ARQ KV P DT R+L+ +
Sbjct: 149 -----LGSEL--------ARQLKV---------SPG-----------DTVRLLSGDGVVY 175
Query: 253 RVAAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLA 312
+P ++ V S++D + RL
Sbjct: 176 SPLGPVPSQRKF------------------LVSAVFEMGSQVDAGVAYVHYQDAKRLMRQ 217
Query: 313 DNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFI 372
++ + + + L D ++ K + +GI A +W +SA++ + +
Sbjct: 218 PSDEINQLRLYLNDPFTAPALAKDVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMS 277
Query: 373 TMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLI 432
ML+++ V I++ LV+ V+ +++++ ++ G + V IF + + +G+ +
Sbjct: 278 LMLSLIVAVAAFNIVSALVMMVVDKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLAL 337
Query: 433 GLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPV 492
GLV+ ++ +N +G ++ + G+ + V +++G + L+ L A YP
Sbjct: 338 GLVVGILITLNLNGLMATLG--ISILGAGQMLPVKLALGQLSLIIVGTLVVTLVATLYPA 395
Query: 493 RLALKISPLEAI 504
A ++ P A+
Sbjct: 396 LRAARVQPATAL 407
>gi|28897753|ref|NP_797358.1| hypothetical protein VP0979 [Vibrio parahaemolyticus RIMD 2210633]
gi|28805966|dbj|BAC59242.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 414
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R++EI +R +GAK
Sbjct: 253 SWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAAEIAILRTMGAKD 312
Query: 412 GFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFGG 461
G +++IF + F S VG L+G+++AL ++ + + GDI F
Sbjct: 313 GLIKRIFVWQGVFSGVFGSLVGSLVGVLVALNLTPIIKGLEGLIGHQFLSGDIYFVDFLP 372
Query: 462 KQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ A+ + A++L+ L A WYP A K++P
Sbjct: 373 SQLHWP---DVALVSTTAIVLS-LLATWYPASRAAKLNP 407
>gi|120434567|ref|YP_860260.1| FtsX family membrane protein (predicted permease) [Gramella
forsetii KT0803]
gi|117576717|emb|CAL65186.1| FtsX family membrane protein (predicted permease) [Gramella
forsetii KT0803]
Length = 421
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 27/286 (9%)
Query: 238 DVDTTRIL--ADMTMGARVAAAIPDSVDLSLSEKSEDEL--FADDSGAD--IIDTVQN-- 289
D+ + R L +D+ +VA I D V +L E++E+ + + SG + +I T +
Sbjct: 141 DITSGRFLNHSDLQQKRKVAV-IGDGVRNALYERNEEVIGSYIKISGVNFMVIGTYKKKG 199
Query: 290 ----SNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEG 345
++ + E + T N+ D W + I KD+ ++ + + K
Sbjct: 200 NGGGNSEEAQKEIFVPFTSFSQAFNMGDRVGW--MAITAKDAYSITNLKSEIFELIKSRH 257
Query: 346 ISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIM-------NTLVVAVMQRS 398
+ G Y LFI + A+ V ++V++ N +++ V +R+
Sbjct: 258 TIHPDDDRAIGNFDLYEEFSKVNGLFIALKAVAYFVGVLVLLSGIIGISNIMLIVVKERT 317
Query: 399 SEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAM 458
+EIG RA+GA +R ES F++ V + G++LA +VN + D M
Sbjct: 318 NEIGVRRALGATPWMIRGQILMESVFLTIVSGMAGIILATGIIWLVN-LQLDGTDTSETM 376
Query: 459 FGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
F S+++G + ++ ++++GL A P + A+KI P++A+
Sbjct: 377 FANP----SVNLGVVMVALSILIISGLLAGMIPAQHAIKIKPVDAL 418
>gi|45358197|ref|NP_987754.1| hypothetical protein MMP0634 [Methanococcus maripaludis S2]
gi|44920954|emb|CAF30190.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 397
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 314 NEAWHHIVIKLKDSSKTQSVIKTLNDWFKE-EGISARAVNWERGMAMYYSAIEGTRILFI 372
++ ++ ++K+KD V + + D ++ G +V +A S+I +F+
Sbjct: 210 DDEYNMFMVKIKDGEDVTKVSEDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFL 269
Query: 373 TMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVL 431
+A +S++V V I NT+ +++++R +IG ++A+GA+ + IF E+ F+ G +
Sbjct: 270 VGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGI 329
Query: 432 IGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYP 491
+G +L ++ A + + +AA+ G IR IS V + + G+ + ++P
Sbjct: 330 VGTILGILIAKAI--------EYVAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFP 381
Query: 492 VRLALKISPLEAI 504
R K++P++ +
Sbjct: 382 ARSGAKLNPVDTL 394
>gi|40062675|gb|AAR37588.1| permease, putative [uncultured bacterium 314]
Length = 406
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 314 NEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFIT 373
N H I + K +++ + K ++ K G+ W++ M E + T
Sbjct: 211 NNLIHEIALNSKGRLESEEIQKLVSA--KTTGVDIET--WQQLMPTIALMTEKMTVFMRT 266
Query: 374 MLA-ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLI 432
+ + I + + +MNT++++ R E G +RAIG + K E+ M+ +I
Sbjct: 267 LFSLIFGIAASLGVMNTMIMSTYDRMREFGIIRAIGTTPWRILKQVSLEAILMTFFASII 326
Query: 433 GLVLALIAAAVVNAFDIRVGDILAAMFGGKQI----RVSISIGSAVWTMAAMLLAGLAAN 488
G+V+ L A + V FGG + R S+S+G + M+L + A+
Sbjct: 327 GVVVGLSVALYFQKYGFDVSGSGNMSFGGVVMDPIWRASVSVGIVFLPVVLMMLISIVAS 386
Query: 489 WYPVRLALKISPLEAIN 505
YP +A +I P+EAI+
Sbjct: 387 IYPASIAARIKPVEAIH 403
>gi|154496631|ref|ZP_02035327.1| hypothetical protein BACCAP_00923 [Bacteroides capillosus ATCC
29799]
gi|150274264|gb|EDN01355.1| hypothetical protein BACCAP_00923 [Bacteroides capillosus ATCC
29799]
Length = 437
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML L + L V I NT+++++ +R+ EIG M+++G +R +F +E+ + +G
Sbjct: 296 MLGGLGAISLFVAALGITNTMIMSISERTREIGIMKSLGCYVSDIRVMFLSEAGAIGLIG 355
Query: 430 VLIGLVLALIAAAVVNAFDI--RVGDILAAMFGGKQI-RVS-ISIGSAVWTMAAMLLAGL 485
LIG V++ I + ++N + + +++ A+ GG+ + RVS I ++ + + GL
Sbjct: 356 GLIGCVISFIVSVIINLVSLGPSLENLIPAIVGGENVNRVSVIPPWLLLFAIIFSVFIGL 415
Query: 486 AANWYPVRLALKISPLEAI 504
+ +YP A++I LEAI
Sbjct: 416 GSGYYPANKAVQIPALEAI 434
>gi|154503119|ref|ZP_02040179.1| hypothetical protein RUMGNA_00943 [Ruminococcus gnavus ATCC 29149]
gi|153796113|gb|EDN78533.1| hypothetical protein RUMGNA_00943 [Ruminococcus gnavus ATCC 29149]
Length = 464
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 7/131 (5%)
Query: 376 AILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLV 435
A+ V I I NT+++++ +R+ EIG ++ +G ++++F E+ F+ +G L+G +
Sbjct: 338 AVSLFVAAIGIANTMMMSIYERTKEIGVIKVLGCSLRNIKQMFLLEAAFIGFIGGLVGNI 397
Query: 436 LALIAAAVVNAFDIRVGDILAAMFGGKQIRVS-ISIGSAVWTMAAMLLAGLAANWYPVRL 494
L+ + + V+NA G + G + +S I I A +M + G+AA ++P
Sbjct: 398 LSFLISFVINAIVASSGAM------GVEGNISYIPIWLAAASMIFAVFVGMAAGYFPALR 451
Query: 495 ALKISPLEAIN 505
A+++SPL AI+
Sbjct: 452 AMRLSPLAAIH 462
>gi|116625537|ref|YP_827693.1| protein of unknown function DUF214 [Solibacter usitatus Ellin6076]
gi|116228699|gb|ABJ87408.1| protein of unknown function DUF214 [Solibacter usitatus Ellin6076]
Length = 417
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 369 ILFITMLAILSVVVL---IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM 425
I + M+ I + +L I IMN ++ V++R+ EIG RAIGA++G + + F E+ +
Sbjct: 290 IFNVVMICIAGISLLVGGIGIMNIMLATVLERTREIGIRRAIGARQGDIVRQFLTEAVLI 349
Query: 426 SCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGL 485
S VG LIG+ AF + ++A++ G + ++ S V + GL
Sbjct: 350 SIVGGLIGI-----------AFGFTLSKVIASVAGWSTV---VTTSSIVVAFGVSVFIGL 395
Query: 486 AANWYPVRLALKISPLEAI 504
YP A K+ P+EAI
Sbjct: 396 LFGIYPAVQAAKLDPIEAI 414
>gi|116186116|ref|ZP_01476015.1| hypothetical protein VEx2w_02001379 [Vibrio sp. Ex25]
gi|151938486|gb|EDN57323.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
sp. Ex25]
Length = 407
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R++EI +R +GAK
Sbjct: 246 SWQQKFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAAEIAILRTMGAKD 305
Query: 412 GFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFGG 461
+++IF + F S VG +IG+++AL ++ + + GDI F
Sbjct: 306 SLIKRIFVWQGVFSGVFGSLVGSVIGVLVALNLTPLIKGLESLIGHQFLSGDIYFVDFLP 365
Query: 462 KQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ A+ +M A++L+ L A WYP A K++P
Sbjct: 366 SQLHWP---DVALVSMTAIVLS-LLATWYPASRAAKLNP 400
>gi|118732222|ref|ZP_01580736.1| ABC transporter related [Delftia acidovorans SPH-1]
gi|118667569|gb|EAV74165.1| ABC transporter related [Delftia acidovorans SPH-1]
Length = 648
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 372 ITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVL 431
I M+A+L V I +MN ++V+V +R+ EIG AIGA++ + + F E+ + VG +
Sbjct: 528 IAMIALL--VGGIGVMNIMLVSVTERTREIGVRMAIGARQSDILQQFLIEAVLVCIVGGI 585
Query: 432 IGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYP 491
+G+ LAL LA G ++S S S V +A L G+ + P
Sbjct: 586 LGVSLALSLG-------------LAVSLSGSSFQLSFSAASIVLAVACSSLIGITFGFLP 632
Query: 492 VRLALKISPLEAINR 506
R A ++ P++A++R
Sbjct: 633 ARSAARLDPVQALSR 647
>gi|20091991|ref|NP_618066.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
gi|19917197|gb|AAM06546.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
Length = 414
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 312 ADNEAWHHIVIKLKDSSKTQSVIKTLNDWFK------EEGISARAVNWERGMAMYYSAIE 365
A+ + + I +K + SV+ + D E +V + MA + +
Sbjct: 218 AEEDVFDSITVKAQSEELVDSVVTKIEDKLMISRHIVREDDRDFSVTASKSMAESVTEMT 277
Query: 366 GTRILFITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
+ LF+ +A +S++V V I NT+ +V++++ EIGTM+AIGAK + IF S
Sbjct: 278 DSITLFLGAIAAVSLLVGAVGIANTMFTSVLEKTKEIGTMKAIGAKNRDILMIFVYNSAM 337
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ VG + G++L + +A+ + + M GG +S+S G + + +L G
Sbjct: 338 VGFVGGIFGVMLGGLVSALFPYLGVTL------MRGGSGTSISLSPGLMTFGLTLAVLIG 391
Query: 485 LAANWYPVRLALKISPLEAI 504
+ + P A K+ P++A+
Sbjct: 392 VISGAVPAYRASKLKPVDAL 411
>gi|156867699|gb|EDO61071.1| hypothetical protein CLOLEP_02684 [Clostridium leptum DSM 753]
Length = 386
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 15/143 (10%)
Query: 364 IEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAES 422
+ T L + +A +S++V I IMN ++V+V +R+ EIG +A+GAK+ + F ES
Sbjct: 256 VNNTMSLLLAGIAAISLLVGGIGIMNIMLVSVTERTREIGIRKAVGAKRQHIMLQFLCES 315
Query: 423 FFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLL 482
+S +G LIGLVL +AAVV+A++ G A +G IG A A++
Sbjct: 316 CILSVLGGLIGLVL---SAAVVSAYNTAAGSSAAINWG---------IGMAAIAFCAVI- 362
Query: 483 AGLAANWYPVRLALKISPLEAIN 505
G+ YP A ++ P++A++
Sbjct: 363 -GILFGSYPAAKASRLQPIDALH 384
>gi|82703624|ref|YP_413190.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosospira multiformis ATCC 25196]
gi|82411689|gb|ABB75798.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosospira multiformis ATCC 25196]
Length = 414
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 320 IVIKLKDSSK-------TQSVIKTLNDWFKEEGISARAV----------NWERGMAMYYS 362
++I L D+ K V L+D FK ++ V +W R A Y+
Sbjct: 204 VLIHLADAQKLYRMENQVSGVRLKLHDLFKAPQVARELVPLISSDVYISDWTRQHANYFR 263
Query: 363 AIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAES 422
AI+ + + +LA++ V I++TLV+AV + S+I +R +GA + KIF +
Sbjct: 264 AIQIEKRMLSLILALIIAVAAFNIVSTLVMAVTDKQSDIAILRTLGASPRSIMKIFIVQG 323
Query: 423 FFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS------AVWT 476
++ VG +G++ ++ A V A + + + F ++ V I S +
Sbjct: 324 TWIGVVGTALGVIGGVLLAYNVEAVIAMIERLFSVQFLSSEVYVISEIPSDLQFDDVIAV 383
Query: 477 MAAMLLAGLAANWYPVRLALKISPLEAI 504
+ L A YP A KI+P EA+
Sbjct: 384 AIVSFVLTLLATLYPSYRASKINPAEAL 411
>gi|118717535|ref|ZP_01570070.1| protein of unknown function DUF214 [Burkholderia multivorans ATCC
17616]
gi|118658900|gb|EAV65645.1| protein of unknown function DUF214 [Burkholderia multivorans ATCC
17616]
Length = 475
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
++F + ++S +VL VI NT+ A+++R+ EIGT+RA+G ++G ++ +F E +
Sbjct: 337 VIFGFVFVLISAIVLFVISNTMSTAIIERTVEIGTLRAMGMRRGGIQTLFVCEGALLGIA 396
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLA-- 486
G +G+++AL AA +N R G + + +++ + W A+ AGLA
Sbjct: 397 GATLGVLVALAIAAAIN----RSGLVWTPPARIDAVALTVRVWGE-WRTIALTFAGLACV 451
Query: 487 ---ANWYPVRLALKISPLEAI 504
+ W P R A ++S ++A+
Sbjct: 452 AGLSAWLPARHAARLSIVDAL 472
>gi|117619856|ref|YP_855302.1| macrolide-specific ABC-type efflux carrier [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|134048473|sp|A0KGB3|MACB1_AERHH Macrolide export ATP-binding/permease protein macB 1
gi|117561263|gb|ABK38211.1| macrolide-specific ABC-type efflux carrier [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 648
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 362 SAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
++ T L I M+A++S+VV I +MN ++V+V +R+ EIG A+GA+ G + + F
Sbjct: 515 TSTNATLTLLIAMIALISLVVGGIGVMNIMLVSVSERTREIGVRMAVGARTGDILQQFLI 574
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAM 480
E+ + +G G++L+L+ + F Q +S S+ + +
Sbjct: 575 EAVLVCLLGGAAGVLLSLLIGVLFEHFS-------------SQFTLSYSLDAVLMAFFCS 621
Query: 481 LLAGLAANWYPVRLALKISPLEAINR 506
L G+ ++P R A ++ P+ A+ R
Sbjct: 622 SLIGVLFGFFPARRAARMDPIHALER 647
>gi|152979011|ref|YP_001344640.1| ABC transporter related [Actinobacillus succinogenes 130Z]
gi|150840734|gb|ABR74705.1| ABC transporter related [Actinobacillus succinogenes 130Z]
Length = 643
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+ D+ T K+L D+ G + + + GT L I+ +A +
Sbjct: 467 ITVKIADNVNTTVAEKSLTDYLTVRHGKKDFFIMNSDTIKQTIESTTGTMKLLISSIAFI 526
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S++V I +MN ++V+V +R+ EIG AIGA+K + + F E+ + +G + G++L+
Sbjct: 527 SLIVGGIGVMNIMLVSVTERTKEIGVRMAIGARKSNILQQFLIEAILICMIGGISGILLS 586
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
LI + N F +S S S V + L G+ + P + A +
Sbjct: 587 LIIGGLFNVF-------------MTDFTMSFSTFSIVAAVLFSTLIGVIFGYMPAKKAAQ 633
Query: 498 ISPLEAINR 506
+ P+ A+ R
Sbjct: 634 LDPITALAR 642
>gi|134094169|ref|YP_001099244.1| macrolide transport protein (ABC superfamily, atp_bind
(N-terminal), membrane (C-terminal)) [Herminiimonas
arsenicoxydans]
gi|133738072|emb|CAL61117.1| macrolide transport protein (ABC superfamily, atp_bind
(N-terminal), membrane (C-terminal)) [Herminiimonas
arsenicoxydans]
Length = 655
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 355 RGMAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAK 410
R MA A+E T+ +L ++ + L+V +MN ++V+V +R+ EIG A GA+
Sbjct: 514 RNMASIMEAMEQTQNTLTILLGSIAAISLLVGGIGVMNIMLVSVTERTREIGIRMATGAR 573
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI 470
+ + + F E+ +S +G IG+V L AAV++AF G I+ S +
Sbjct: 574 ESNIMQQFLIEAVVVSAIGGAIGVVFGLATAAVISAF-------------GTPIKYSAA- 619
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + GL + P + A ++ P+ A++
Sbjct: 620 -PVLLAFGCAFMTGLVFGYLPAKKAAQLDPVVALS 653
>gi|126178017|ref|YP_001045982.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
gi|125860811|gb|ABN56000.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
Length = 381
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 313 DNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFI 372
D + + +++K++D + +V +++ ++ RG+ G+ +F+
Sbjct: 196 DEDDYDQVIVKVRDVNDIDAVKESIEQRMNRREDVVNVMD-TRGILESIFEATGSITVFL 254
Query: 373 TMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVL 431
+ +S++V + I+N ++++V +R EIG +R+IG ++G V ++F E+ + G +
Sbjct: 255 AGIGAISLLVAGVSILNVMLMSVTERIKEIGVLRSIGTRRGEVMRMFIYEALVLGLAGAV 314
Query: 432 IGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYP 491
+G VL+ A +V A + D L S+ V+ MA ++ +A+ YP
Sbjct: 315 LGGVLSFCAGYLVTAIFVGNADYLFD---------PTSLLYIVFGMAFGVITSVASGLYP 365
Query: 492 VRLALKISPLEAI 504
A ++P++A+
Sbjct: 366 AWKAAHLNPIQAL 378
>gi|148980816|ref|ZP_01816226.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrionales bacterium SWAT-3]
gi|145961051|gb|EDK26372.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrionales bacterium SWAT-3]
Length = 414
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R+SEI +R +GA
Sbjct: 253 SWQQKFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRASEIAILRTMGASD 312
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
G V++IF + F +G L+G + ++ A + + ++ F I +
Sbjct: 313 GLVKRIFVWQGVFSGVLGSLVGSAIGVLVALNLTTLIKGLEKLIDHQFLSGDIYFVDFLP 372
Query: 472 SAVWTMAAMLLAGLA------ANWYPVRLALKISPLEAIN 505
S + M ++++G A A WYP A K++P ++
Sbjct: 373 SQLNMMDVVVVSGTAIALSLLATWYPASRAAKLNPASVLS 412
>gi|62391391|ref|YP_226793.1| ABC-type transport system, involved in lipoprotein release,
permease component [Corynebacterium glutamicum ATCC
13032]
gi|41326732|emb|CAF21214.1| ABC-type transport system, involved in lipoprotein release,
permease component [Corynebacterium glutamicum ATCC
13032]
Length = 853
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 257 AIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEA 316
+I S+DLS ++ FAD++G + DT+Q + +G EL N+A
Sbjct: 599 SIDGSLDLSNPGVVTNQTFADENGWAVGDTLQLESMG----QTIGDIELIG--TFTGNDA 652
Query: 317 WHHIVIK---LKDSSKTQSVIKTLNDWFKEEGISARAV--NWERGMAMY----------- 360
+++I L D+ + + + EEG + N E +A Y
Sbjct: 653 IGNMIISESSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEF 712
Query: 361 ----YSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRK 416
+ I+ + +LA+ +V +I I+NTL + V++R EIG +RA+G K+G VR
Sbjct: 713 AGETVAMIDTMMNILYALLALSVIVAIIGIINTLALNVIERRQEIGMLRAVGVKRGQVRT 772
Query: 417 IFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI--GSAV 474
+ ES ++ G +IG+ + L +G + G+ + ++SI G
Sbjct: 773 MITLESVQIAIYGAVIGIAIGL-----------GLGWAFVTVMSGEGLDAAVSIPWGQVG 821
Query: 475 WTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + G+ A +P A + PL+AI
Sbjct: 822 LMLVGSAVVGVIAALWPAVKASRTPPLDAI 851
>gi|23308948|ref|NP_601752.2| ABC-type transporter, permease component [Corynebacterium
glutamicum ATCC 13032]
gi|21325324|dbj|BAB99945.1| ABC-type transporter, permease components [Corynebacterium
glutamicum ATCC 13032]
Length = 847
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 257 AIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEA 316
+I S+DLS ++ FAD++G + DT+Q + +G EL N+A
Sbjct: 593 SIDGSLDLSNPGVVTNQTFADENGWAVGDTLQLESMG----QTIGDIELIG--TFTGNDA 646
Query: 317 WHHIVIK---LKDSSKTQSVIKTLNDWFKEEGISARAV--NWERGMAMY----------- 360
+++I L D+ + + + EEG + N E +A Y
Sbjct: 647 IGNMIISESSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEF 706
Query: 361 ----YSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRK 416
+ I+ + +LA+ +V +I I+NTL + V++R EIG +RA+G K+G VR
Sbjct: 707 AGETVAMIDTMMNILYALLALSVIVAIIGIINTLALNVIERRQEIGMLRAVGVKRGQVRT 766
Query: 417 IFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI--GSAV 474
+ ES ++ G +IG+ + L +G + G+ + ++SI G
Sbjct: 767 MITLESVQIAIYGAVIGIAIGL-----------GLGWAFVTVMSGEGLDAAVSIPWGQVG 815
Query: 475 WTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + G+ A +P A + PL+AI
Sbjct: 816 LMLVGSAVVGVIAALWPAVKASRTPPLDAI 845
>gi|153835242|ref|ZP_01987909.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
harveyi HY01]
gi|148868280|gb|EDL67414.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
harveyi HY01]
Length = 414
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R++EI +R +GAK
Sbjct: 253 SWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAAEIAILRTMGAKD 312
Query: 412 GFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFGG 461
G +++IF + F S G ++G+++AL ++ + + GDI F
Sbjct: 313 GLIKRIFVWQGVFSGVFGSLAGSVVGVLVALNLTPIIKGLEALIGHQFLSGDIYFVDFLP 372
Query: 462 KQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ A+ ++ A++L+ L A WYP A K++P
Sbjct: 373 SQLHWP---DVALVSITAIVLS-LLATWYPASRAAKLNP 407
>gi|150009938|ref|YP_001304681.1| ABC transporter permease protein [Parabacteroides distasonis ATCC
8503]
gi|149938362|gb|ABR45059.1| ABC transporter permease protein [Parabacteroides distasonis ATCC
8503]
Length = 406
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 355 RGMAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAK 410
R M + + T + T+LA ++ + L+V IMN + V+V +R+ EIG +IGAK
Sbjct: 264 RSMQELSTMLTSTTDIMTTLLAAVAGISLLVGGIGIMNIMYVSVTERTREIGLRMSIGAK 323
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI 470
+ F ES +S G LIG++ + AA +VN + I
Sbjct: 324 GMDILAQFLIESILISVTGGLIGVLFGVGAALIVNVV--------------AHFPIYIQP 369
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
S + + + G+ WYP + A ++ P+EAI
Sbjct: 370 WSVLLSFVVCTVTGVFFGWYPAKKAAQLDPIEAI 403
>gi|121609486|ref|YP_997293.1| protein of unknown function DUF214 [Verminephrobacter eiseniae
EF01-2]
gi|121554126|gb|ABM58275.1| protein of unknown function DUF214 [Verminephrobacter eiseniae
EF01-2]
Length = 407
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 9/188 (4%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILS 379
+V+ L+D+ T ++ L I W Y + RI+F + I++
Sbjct: 225 LVLALRDTDATDALASRLRAQLPALDIK----RWIELAPFYNQVVSLYRIIFTVLGIIIA 280
Query: 380 VVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALI 439
+VV I N+++++VM+R E+GT+RAIG +++ F E + +G +GLVLAL+
Sbjct: 281 IVVFISTANSMLMSVMERIREVGTLRAIGIPDRRIQQTFLLEGGMIGMLGGSVGLVLALL 340
Query: 440 AAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSA--VWTMAAMLLAGLAANWYPVRLALK 497
A VVN DIR+ I +S+ + ++ +W + +LL+ LAA W P R+ +
Sbjct: 341 TALVVNLSDIRMPPPPGRTTDYPLI-ISMQVDTSLMIW-LVFILLSALAA-WAPHRVTRR 397
Query: 498 ISPLEAIN 505
+S +E +N
Sbjct: 398 LSIIEKLN 405
>gi|156973822|ref|YP_001444729.1| hypothetical protein VIBHAR_01532 [Vibrio harveyi ATCC BAA-1116]
gi|156525416|gb|ABU70502.1| hypothetical protein VIBHAR_01532 [Vibrio harveyi ATCC BAA-1116]
Length = 407
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W++ Y I+ R I+++ M ++ V ++ +TL++AV R++EI +R +GAK
Sbjct: 246 SWQQQFGFLYRDIQLVRTIMYLVMFLVIGVACFNIV-STLMMAVKDRAAEIAILRTMGAK 304
Query: 411 KGFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFG 460
G +++IF + F S G ++G+++AL ++ + + GDI F
Sbjct: 305 DGLIKRIFVWQGVFSGVFGSLAGSVVGVLVALNLTPIIKGLEALIGHQFLSGDIYFVDFL 364
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ A+ ++ A++L+ L A WYP A K++P
Sbjct: 365 PSQLHWP---DVALVSITAIVLS-LLATWYPASRAAKLNP 400
>gi|34763698|ref|ZP_00144622.1| EXPORT ABC TRANSPORTER PERMEASE PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886550|gb|EAA23783.1| EXPORT ABC TRANSPORTER PERMEASE PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 408
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 361 YSAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFF 419
+ I T LF+T+ A +S++V I +MN ++V V++R+ EIG +A+GAK + K F
Sbjct: 275 FDKILSTLSLFVTLAASISLLVGGIGVMNIMLVTVVERTKEIGIRKALGAKNRDILKQFL 334
Query: 420 AESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAA 479
ES ++ +G LIG+V+ + G + A+ G K I S+ S + +++
Sbjct: 335 FESIILTVLGGLIGMVVGIF-----------FGLLTGAIMGIKPI---FSLLSIIVSLSI 380
Query: 480 MLLAGLAANWYPVRLALKISPLEAI 504
++ G+ P R A K++P++A+
Sbjct: 381 SVIVGIIFGVSPARRAAKLNPIDAL 405
>gi|94969853|ref|YP_591901.1| ABC efflux pump, inner membrane subunit [Acidobacteria bacterium
Ellin345]
gi|94551903|gb|ABF41827.1| ABC efflux pump, inner membrane subunit [Acidobacteria bacterium
Ellin345]
Length = 453
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 334 IKTLNDWFKEEGISARAV-NWERGMAMYYSAIEGTRILFITMLAILSVVVL-IVIMNTLV 391
++ + D K+ G S ++ + + + ++ ++ +F+ + L++ V I I+NTLV
Sbjct: 285 VQQVEDGVKKLGFSTFSILDASKSVTQFFRVLD----MFLAIFGSLALTVASIGIVNTLV 340
Query: 392 VAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNA---FD 448
+A+++R EIG M+AIGA V+ +FF E+ M +G ++G+ L + AV+N F
Sbjct: 341 MAILERRREIGIMKAIGASDADVKLLFFTEAGAMGVLGGILGVTLGWLIGAVINIGTNFY 400
Query: 449 IRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+R ++ +Q+ V +S ++ MA + L A YP A K+ P++ +
Sbjct: 401 LRRQELPP-----EQLWV-VSWWLVLFAMAISVGISLLAGLYPAGRAAKLDPVQTL 450
>gi|16119402|ref|NP_396108.1| hypothetical protein AGR_pAT_247 [Agrobacterium tumefaciens str.
C58]
gi|17938764|ref|NP_535552.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
tumefaciens str. C58]
gi|81848841|sp|Q8UKE4|MACB_AGRT5 Macrolide export ATP-binding/permease protein macB
gi|15161930|gb|AAK90549.1| AGR_pAT_247p [Agrobacterium tumefaciens str. C58]
gi|17743610|gb|AAL45868.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
tumefaciens str. C58]
Length = 648
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 375 LAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+A++S++V I +MN ++V+V +R+ EIG A+GA++ + F E+ + VG L+G
Sbjct: 528 VAVISLIVGGIGVMNIMLVSVTERTKEIGVRVAVGARRSDILSQFLIEAVMVCLVGGLMG 587
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
++LAL +A+ N +L+ F ++ S GS + A L G+ + P R
Sbjct: 588 IMLALGISALFN--------LLSPDF-----KMIFSPGSIIVAFACSTLIGIVFGFLPAR 634
Query: 494 LALKISPLEAINR 506
A K+ P+EA+ R
Sbjct: 635 NAAKLDPIEALAR 647
>gi|68055620|ref|ZP_00539763.1| Protein of unknown function DUF214 [Exiguobacterium sibiricum
255-15]
gi|68007755|gb|EAM86999.1| Protein of unknown function DUF214 [Exiguobacterium sibiricum
255-15]
Length = 299
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 313 DNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFI 372
DN ++K ++T+++ T+ K E I + E + ++ +EG RI I
Sbjct: 118 DNPLHDRYIVKATSPNETETIANTVK---KMENIDSVEYG-EDYVEKMFNFLEGVRIGGI 173
Query: 373 TMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLI 432
++ L+ + + +I NT+ V + R EI MR +GAK GF+R FF E M +G LI
Sbjct: 174 ILIVGLTFMAMFLISNTIKVTIFSRRREIEIMRLVGAKNGFIRAPFFIEGLLMGVLGALI 233
Query: 433 GLVLALIAAAVV-NAFDIRVGDILAAMF-----GGKQIRVSI 468
+ + V NA ++ + A++F G I+VS+
Sbjct: 234 PIAVVYFGYEVTYNALQPQLVSLNASIFTLIPPGELSIQVSV 275
>gi|154148879|ref|YP_001406639.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
hominis ATCC BAA-381]
gi|153804888|gb|ABS51895.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
hominis ATCC BAA-381]
Length = 640
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 72/318 (22%), Positives = 141/318 (44%), Gaps = 49/318 (15%)
Query: 221 FFDYAHPDTAIDG-IAYFDVDTTRILADMTMGARVAAAIPDSVDLSLSEKSEDELFADDS 279
+ DY+ P+T+ +G IAY ++ + IL+ G + SV+L D+ + +
Sbjct: 339 YIDYSTPNTSANGLIAYANLSSNGILS----GGGANSLAIRSVELQSGRNFTDDDIKNSA 394
Query: 280 GADIID--TVQNSNSKID-------YEN----LLGSTE-----LRDRLNL---------- 311
IID TV + D ++N ++G E +DRL +
Sbjct: 395 SVVIIDQNTVDTFFTNTDPIGKILLFKNRPLLIIGMAENEKFSSQDRLKIYAPYTTVMNK 454
Query: 312 -ADNEAWHHIVIKLKDSSKTQSVIKTLNDWF-KEEGISARAVNWERGMAMYYSAIEGTRI 369
+ N I +K+ D+ T++ ++ K I + + GT
Sbjct: 455 ISGNRDISSITVKISDNVSTKTAEDSITAILTKRHIIKDFHTRNSDTIKETIESTMGTMR 514
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L I+ +A++S++V I +MN ++V+V +R+ EIG AIGAK+ + + F E+ + +
Sbjct: 515 LLISSIAVISLIVGGIGVMNIMLVSVTERTKEIGVRMAIGAKESNILEQFLIEAILLCSI 574
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G ++G+++AL A N+ + S+ A+ + A G+
Sbjct: 575 GGVLGIIIALGFGAAFNSVS-------------SDFVMKFSLMPAITALIASCAIGIVFG 621
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A +++P++A+++
Sbjct: 622 YLPARNASRLNPIDALSQ 639
>gi|89893282|ref|YP_516769.1| hypothetical protein DSY0536 [Desulfitobacterium hafniense Y51]
gi|89332730|dbj|BAE82325.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 443
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 310 NLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRI 369
N + +++ + ++K+ SK V K + K G R++ R M A + ++
Sbjct: 261 NTTEKKSYQNALVKVNHISKVAEVEKEI----KRLGFDTRSMESIR-EPMEKEARQ-KQL 314
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
+ + AI V I I NT+++++ +R+ EIG M+A+G +R IF ES + +G
Sbjct: 315 MLGGLGAISLFVAAIGITNTMIMSISERTKEIGIMKALGCYVKDIRIIFLTESGIIGFLG 374
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
+IG V++LI + V+N ++ GG ++ + I + + + + G+ + +
Sbjct: 375 GVIGNVVSLIISLVMN--------FVSEGAGGSKLSI-IPLWLIGFAVVFSIFIGVGSGY 425
Query: 490 YPVRLALKISPLEAI 504
YP A+KIS LEAI
Sbjct: 426 YPANKAVKISALEAI 440
>gi|38234455|ref|NP_940222.1| Putative ABC transport system permease protein [Corynebacterium
diphtheriae NCTC 13129]
gi|38200718|emb|CAE50414.1| Putative ABC transport system permease protein [Corynebacterium
diphtheriae]
Length = 854
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 324 LKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVL 383
LK Q + K + D+ +A+ E+ S I + +L + +V +
Sbjct: 687 LKPDELKQEIEKAVEDFLVVRVQTAKEFAGEQA-----STISQMMNILYALLGLAVIVAV 741
Query: 384 IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAV 443
I I+NTL + V++R EIG +RA+G ++G +R + ES ++ G ++G+V+ L
Sbjct: 742 IGIINTLALNVIERRQEIGMLRAVGTQRGQIRTMISIESVQIALYGAVMGIVVGLGLG-- 799
Query: 444 VNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEA 503
L + VS+ VW + + G+ A +P R A K PL+A
Sbjct: 800 --------WSFLKVLSSQGLENVSVPWSQMVWLLVGSAVVGVIAAVWPARRAAKTPPLDA 851
Query: 504 I 504
I
Sbjct: 852 I 852
>gi|85860097|ref|YP_462299.1| lipoprotein releasing system, permease component [Syntrophus
aciditrophicus SB]
gi|85723188|gb|ABC78131.1| lipoprotein releasing system, permease component [Syntrophus
aciditrophicus SB]
Length = 425
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 22/223 (9%)
Query: 295 DYENLLGSTELRD---RLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAV 351
+Y++ L LRD LNL D + + IK+ D + ++ +T+ K+ G A
Sbjct: 209 EYDSTLAYLSLRDCQAFLNLDDVAS--GLEIKVNDIYRADTIARTIE---KKLGYPYWAR 263
Query: 352 NWERGMAMYYSAIE-GTRILFITMLAILSVVVLIV---IMNTLVVAVMQRSSEIGTMRAI 407
+W ++A++ R++FI ILS++VL+ I++TL++ VM+++ +I ++++
Sbjct: 264 HWMEMNKNLFAALKLEKRVMFI----ILSLIVLVAAFNIISTLIMVVMEKNKDIAILKSM 319
Query: 408 GAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILA-AMFGGKQIRV 466
GA G + KIF + + +G +G + L A ++ + V ++ + G +
Sbjct: 320 GATSGSIMKIFVFQGLTIGTIGTALGCIAGLAVAHNLSGLSVFVENLFGFKILPGDVYYL 379
Query: 467 SISIGSAVWTMAAMLLAG-----LAANWYPVRLALKISPLEAI 504
S +T A+++AG + YP R A ++ P EA+
Sbjct: 380 SELPSRVDYTDVAIIVAGSILISFLSTLYPSRRAARLDPAEAL 422
>gi|4098079|gb|AAD09219.1| ABC transporter membrane protein subunit [Streptococcus mutans]
Length = 498
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 22/251 (8%)
Query: 261 SVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADN---EAW 317
S +LS+ +++ + + AD ++ N N+ Y++ L +++ + DN E
Sbjct: 260 SDNLSVQQQASMASMSAEELADYVNRY-NENANATYKDNL------EKIGIIDNNNPETI 312
Query: 318 HHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSA----IEGTRILFIT 373
H KD + +I N K++ +R + + + + S+ I + I
Sbjct: 313 HFYASSFKDKEALKDLISDYNKKVKKDKHKSRVIRYTDTVGLMMSSVTTMINAVTYILIG 372
Query: 374 MLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+AI +V I+I ++V++R+ EIG +RA+GA K V +IF AE+ + ++G
Sbjct: 373 FVAISLIVSSIMIGIITYISVLERTKEIGILRAMGASKRDVTRIFTAETIIEGAIAGVLG 432
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+++ L+ +I + I+ I S+ I SA+ +A +L + A P R
Sbjct: 433 ILITLL-------LNIAITLIVKNWLNINHIS-SLPIWSAIVLIAISILLTVFAGILPSR 484
Query: 494 LALKISPLEAI 504
+A K P+EA+
Sbjct: 485 VAAKKDPVEAL 495
>gi|56414005|ref|YP_151080.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|81821434|sp|Q5PGK9|MACB_SALPA Macrolide export ATP-binding/permease protein macB
gi|56128262|gb|AAV77768.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 648
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAMLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L++ A ++ F G +I S++ ++ + + G+
Sbjct: 583 GGALGISLSMFIAFMLQLF-----------LPGWEIGFSLTALASAFLCST--FTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|88800941|ref|ZP_01116493.1| hypothetical protein MED297_04704 [Reinekea sp. MED297]
gi|88776316|gb|EAR07539.1| hypothetical protein MED297_04704 [Reinekea sp. MED297]
Length = 405
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 311 LADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRIL 370
L D + + + L+D+S + L+ F E ++ W+ Y S +
Sbjct: 214 LVDADRVSQLSVYLRDTSAQADYEQQLSALFPELKVTP----WQDRAFFYRSVKNLYDRI 269
Query: 371 FITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGV 430
F M ++ ++VL + NT ++VM+R EIG + A+G + + ++F E+ +++ +G
Sbjct: 270 FGVMGGVILIMVLFAVFNTSAMSVMERIREIGMLSAMGTHRREIVRLFLIEASYLAILGT 329
Query: 431 LIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWY 490
+GL+++ + ++ F I + G ++V +A W++ + + LAA+
Sbjct: 330 ALGLIISAVITLLLIGFPINMPPP-PGQTEGYPLQVYFFWQAAAWSLVLVWVMALAASAL 388
Query: 491 PVRLALKISPLEAI 504
VR ++ + EA+
Sbjct: 389 AVRKGVRYTVAEAL 402
>gi|144899843|emb|CAM76707.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Magnetospirillum gryphiswaldense MSR-1]
Length = 414
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 333 VIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVV 392
V +T N F+ + R +W++ A +++A++ R + +L ++ +V I+++L++
Sbjct: 234 VTETRNAIFRLTQGNVRIYDWQQANASFFNAVQVERNVMFLILTLIILVAAFNIISSLIM 293
Query: 393 AVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVG 452
V + +I +R +GA +G + +IFF + VG + G +L + A + +
Sbjct: 294 LVKDKGRDIAILRTMGATRGMIMRIFFLAGASVGVVGTVFGTILGVWFATHIEQIRQFIQ 353
Query: 453 DIL------AAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
I+ A ++ Q+ + G V + L +AA YP A + P+EA+
Sbjct: 354 SIIGRELFAAEIYFLTQLPARVEYGEVVVVVLMALGLSIAATIYPSWRAANLDPVEAL 411
>gi|70729518|ref|YP_259256.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas fluorescens Pf-5]
gi|122064297|sp|Q4KES7|MACB1_PSEF5 Macrolide export ATP-binding/permease protein macB 1
gi|68343817|gb|AAY91423.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas fluorescens Pf-5]
Length = 652
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 375 LAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+A++S+VV I +MN ++V+V +R+ EIG A+GA++ +R+ F E+ + +G IG
Sbjct: 532 IAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLIGGAIG 591
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+ L+ + F K+ + S+GS + A L G+ + P R
Sbjct: 592 ISLSFAIGYLFTLFI-------------KEWEMVFSMGSIITAFACSTLIGIVFGFVPAR 638
Query: 494 LALKISPLEAINR 506
A ++ P+EA+ R
Sbjct: 639 NAARLDPIEALAR 651
>gi|26990902|ref|NP_746327.1| ABC export system, permease/ATP-binding protein, putative
[Pseudomonas putida KT2440]
gi|81840489|sp|Q88F88|MACB_PSEPK Macrolide export ATP-binding/permease protein macB
gi|24985917|gb|AAN69791.1|AE016615_7 ABC export system, permease/ATP-binding protein, putative
[Pseudomonas putida KT2440]
Length = 654
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML ++ + L+V +MN +++ V +R+ EIG A GA++ + + F +E+ +S VG
Sbjct: 532 MLGAIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVG 591
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L G+ LAL+ A + DI V L A+ G A ++ G+ +
Sbjct: 592 GLTGIALALVVGASLTLADIAVAFALPAIVGA---------------FACAVITGVVFGF 636
Query: 490 YPVRLALKISPLEAI 504
P R A ++ P++A+
Sbjct: 637 MPARKAARLDPVKAL 651
>gi|42522295|ref|NP_967675.1| Macrolide specific ABC-type transporter, ATP-binding protein
[Bdellovibrio bacteriovorus HD100]
gi|81829284|sp|Q6MPX9|MACB_BDEBA Macrolide export ATP-binding/permease protein macB
gi|39574826|emb|CAE78668.1| Macrolide specific ABC-type transporter, ATP-binding protein
[Bdellovibrio bacteriovorus HD100]
Length = 650
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 357 MAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKG 412
MA A+ T +LA ++ + L+V IMN ++V+V +R+ EIG +AIGA++
Sbjct: 510 MADIQQALNSTSQTLSMLLASIAAISLVVGGIGIMNIMLVSVTERTKEIGLRKAIGARRR 569
Query: 413 FVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS 472
+ F AES +S G L+G+ L + F + + +L +S GS
Sbjct: 570 DILLQFLAESIVVSVCGGLLGIALGV-------GFSLLISKVLGW-------STVVSAGS 615
Query: 473 AVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + L G+ YP A K+ P+EA+
Sbjct: 616 VILSFGFSALIGIVFGSYPASKASKLHPIEAL 647
>gi|24379816|ref|NP_721771.1| putative ABC transporter, membrane protein subunit and ATP-binding
protein [Streptococcus mutans UA159]
gi|24377785|gb|AAN59077.1|AE014974_7 putative ABC transporter, membrane protein subunit and ATP-binding
protein [Streptococcus mutans UA159]
Length = 842
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 22/251 (8%)
Query: 261 SVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADN---EAW 317
S +LS+ +++ + + AD ++ N N+ Y++ L +++ + DN E
Sbjct: 604 SDNLSVQQQASMASMSAEELADYVNRY-NENANATYKDNL------EKIGIIDNNNPETI 656
Query: 318 HHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSA----IEGTRILFIT 373
H KD + +I N K++ +R + + + + S+ I + I
Sbjct: 657 HFYASSFKDKEALKDLISDYNKKVKKDKHKSRVIRYTDTVGLMMSSVTTMINAVTYILIG 716
Query: 374 MLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+AI +V I+I ++V++R+ EIG +RA+GA K V +IF AE+ + ++G
Sbjct: 717 FVAISLIVSSIMIGIITYISVLERTKEIGVLRAMGASKRDVTRIFTAETIIEGAIAGVLG 776
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+++ L+ +I + I+ I S+ I SA+ +A ++ + A P R
Sbjct: 777 ILITLL-------LNIAITLIVKNWLNINHIS-SLPIWSAIVLIAISIVLTVFAGILPSR 828
Query: 494 LALKISPLEAI 504
+A K P+EA+
Sbjct: 829 VAAKKDPVEAL 839
>gi|148324037|gb|EDK89287.1| antimicrobial peptide ABC superfamily ATP binding cassette
transporter membrane protein [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 408
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 23/149 (15%)
Query: 361 YSAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFF 419
+ I T LF+T+ A +S++V I +MN ++V V++R+ EIG +A+GAK + K F
Sbjct: 275 FDKILSTLSLFVTLAASISLLVGGIGVMNIMLVTVVERTKEIGIRKALGAKNRDILKQFL 334
Query: 420 AESFFMSC----VGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVW 475
ES ++ VG+ IG++ L+ AVV I+ S+ S +
Sbjct: 335 FESIILTVFGGLVGIFIGILFGLLTGAVVG------------------IKPIFSMASIIA 376
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAI 504
+++ ++ G+ P R A K++P++A+
Sbjct: 377 SLSISVIVGIIFGVSPARRAAKLNPIDAL 405
>gi|153869422|ref|ZP_01999022.1| ABC transporter, permease protein [Beggiatoa sp. PS]
gi|152074084|gb|EDN70980.1| ABC transporter, permease protein [Beggiatoa sp. PS]
Length = 397
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 16/194 (8%)
Query: 313 DNEAWHHIVIKLKDSSKTQSVIKTLNDWF--KEEGISARAVNWERGMAMYYSAIEGTRIL 370
D++ I ++L+ ++ V + + D+F +E+G+ E+ + + +L
Sbjct: 215 DDKEIAGITVRLEPNANYSGVGQQVKDYFARQEKGLEVETHTAEKLIETKEQDAKRFTLL 274
Query: 371 FITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGV 430
+ +I +V I IMN ++ +VM R EIG +RAIGA++ ++ +F E+ +S VG
Sbjct: 275 LGAIGSISMLVGGIGIMNVMLTSVMDRRREIGILRAIGARQRDIQWLFLMEAILLSLVGG 334
Query: 431 LIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWY 490
++G+ L ++A+ V F+ L + F I + + + S V G+ +Y
Sbjct: 335 VLGISLGIVASYFVAWFN--DWQFLISSFA---IFLGVGVSSGV---------GIFFGFY 380
Query: 491 PVRLALKISPLEAI 504
P A K+ P+ A+
Sbjct: 381 PAYKAAKLDPITAL 394
>gi|86140728|ref|ZP_01059287.1| ABC transporter, permease protein, putative [Flavobacterium sp.
MED217]
gi|85832670|gb|EAQ51119.1| ABC transporter, permease protein, putative [Leeuwenhoekiella
blandensis MED217]
Length = 419
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 371 FITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGV 430
F+ +L +LS + I I N +++ V +R+ EIG RA+GA +R ES F++ +
Sbjct: 291 FVGILVLLSGI--IGISNIMLIVVKERTKEIGIRRALGASPWSIRGQILMESVFLTIISG 348
Query: 431 LIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWY 490
++G+ L V+NA G + MF S+ +G+ + + ++ +GL A +
Sbjct: 349 MVGISLGAALIYVLNAILDANGPV--EMFANP----SVDLGTVITALFILIFSGLLAGFI 402
Query: 491 PVRLALKISPLEAI 504
P + A+K+ P++A+
Sbjct: 403 PAQNAIKVKPIDAL 416
>gi|152974477|ref|YP_001373994.1| protein of unknown function DUF214 [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023229|gb|ABS20999.1| protein of unknown function DUF214 [Bacillus cereus subsp.
cytotoxis NVH 391-98]
Length = 393
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 320 IVIKLKDSSKTQSV----IKTLNDWFKEEGISARAVNWERGMAMYYSAIEGT-RILFITM 374
I +K+ + Q+V IK+LND K E + + G + +F +
Sbjct: 215 ITVKIDPAQDKQTVQDAVIKSLNDAKKPEYTGEFKIQDPQEALKEIDNFTGILKSVFGGI 274
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGL 434
AI +V I +MN ++V+V +R+ EIG +AIGA +G + F ES ++ +G IG
Sbjct: 275 AAISLLVGGIGVMNIMLVSVTERTREIGIRKAIGATRGKILLQFLIESCILTALGGFIGF 334
Query: 435 VLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRL 494
+L + A +V AMF G + VS+ +G + ++A +L G+ P
Sbjct: 335 LLGIFFAWIV------------AMFAGWPLVVSVKLG--IISVALSMLIGILFGLLPANK 380
Query: 495 ALKISPLEAI 504
K+ P+E +
Sbjct: 381 EAKLDPIECL 390
>gi|16759815|ref|NP_455432.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142412|ref|NP_805754.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
gi|81853310|sp|Q8Z824|MACB_SALTI Macrolide export ATP-binding/permease protein macB
gi|25307490|pir||AF0609 conserved hypothetical ABC transporter ybjZ [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502108|emb|CAD05344.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138042|gb|AAO69603.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
Length = 648
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L++ A ++ F G +I S++ ++ + + G+
Sbjct: 583 GGALGISLSMFIAFMLQLF-----------LPGWEIGFSLTALASAFLCST--FTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|16764304|ref|NP_459919.1| putative transport protein [Salmonella typhimurium LT2]
gi|81853745|sp|Q8ZQE4|MACB_SALTY Macrolide export ATP-binding/permease protein macB
gi|16419454|gb|AAL19878.1| putative ABC superfamily (atp&memb) transport protein [Salmonella
typhimurium LT2]
Length = 648
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L++ A ++ F G +I S++ ++ + + G+
Sbjct: 583 GGALGISLSMFIAFMLQLF-----------LPGWEIGFSLTALASAFLCST--FTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|62179467|ref|YP_215884.1| putative ABC superfamily (atp&memb) transport protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|81309729|sp|Q57R58|MACB_SALCH Macrolide export ATP-binding/permease protein macB
gi|62127100|gb|AAX64803.1| putative ABC superfamily (atp&memb) transport protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 648
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L++ A ++ F G +I S++ ++ + + G+
Sbjct: 583 GGALGISLSMFIAFMLQLF-----------LPGWEIGFSLTALASAFLCST--FTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|20091320|ref|NP_617395.1| hypothetical protein MA2489 [Methanosarcina acetivorans C2A]
gi|19916448|gb|AAM05875.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 389
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 342 KEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSV-VVLIVIMNTLVVAVMQRSSE 400
+E G+ A V+W A + +E T+ +F+ + L + I NTL+ V QR+ E
Sbjct: 228 RETGLDA--VSWIEENAEILNLLE-TQTVFVNIFYFLIYGIAGFGIANTLITIVAQRTRE 284
Query: 401 IGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFG 460
IG ++A+GA + + +F +S + +G+++G +L I + +++I V + FG
Sbjct: 285 IGILKAMGASQKSIMFVFLFQSMILGAIGLILGTILGYIVTVGLQSYEIEVPQEM--YFG 342
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + + I + V+ + + + YP R A K+ P++AI
Sbjct: 343 LQTLPLEIEPLNFVYAAFFAFIINIISGIYPARKAAKLDPVKAI 386
>gi|152986401|ref|YP_001348230.1| probable ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa PA7]
gi|150961559|gb|ABR83584.1| probable ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa PA7]
Length = 663
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
Query: 356 GMAMYYSAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFV 414
M +A + T L + +A +S++V I +MN +++ V +R+ EIG A GA++G +
Sbjct: 526 AMIQAEAATQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQGDI 585
Query: 415 RKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAV 474
+ F E+ +S VG L G+ LAL +G +L + G Q+ V+ S+ + V
Sbjct: 586 LRQFLTEAAMLSVVGGLAGIALAL-----------SIGGML--LLG--QVAVAFSLSAIV 630
Query: 475 WTMAAMLLAGLAANWYPVRLALKISPLEAI 504
L+ GL + P R A ++ P+ A+
Sbjct: 631 GAFGCALVTGLVFGFMPARKAAQLDPVAAL 660
>gi|16125183|ref|NP_419747.1| hypothetical protein CC_0931 [Caulobacter crescentus CB15]
gi|13422203|gb|AAK22915.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 401
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 315 EAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITM 374
E +I +KLKD ++ + F E RA W+ A++ TM
Sbjct: 223 EGVTNIEVKLKDPQDARATAR-----FLGEATGLRATPWQEKNVGLEDALKAQGQTG-TM 276
Query: 375 LAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+ I S++ +I+ + + LV++ +R SE+G MRA G GF+ +F + G+LIG
Sbjct: 277 IQIFSLISIIIGVASALVLSAYRRRSEVGIMRAFGVPGGFILWVFLLQ-------GLLIG 329
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
LV ALI A I + I G + ++ G + L + A+ P R
Sbjct: 330 LVGALIGCASGYGLCIWLESITRPD-GTSILPIAPRQGGYAAALVLTTLGAVIASILPAR 388
Query: 494 LALKISPLEAINR 506
A KI PLEAI +
Sbjct: 389 SASKIDPLEAIQQ 401
>gi|104782105|ref|YP_608603.1| macrolide ABC efflux protein MacB [Pseudomonas entomophila L48]
gi|123079163|sp|Q1I966|MACB1_PSEE4 Macrolide export ATP-binding/permease protein macB 1
gi|95111092|emb|CAK15812.1| macrolide ABC efflux protein MacB [Pseudomonas]
Length = 667
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 375 LAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+A++S+VV I +MN ++V+V +R+ EIG A+GA++ +R+ F E+ + +G +IG
Sbjct: 547 IAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLIGGVIG 606
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+ L+ +G + A KQ + S+GS V L G+ + P R
Sbjct: 607 IGLSY-----------GIGYLFALFV--KQWEMVFSLGSIVTAFVCSTLIGIVFGFVPAR 653
Query: 494 LALKISPLEAINR 506
A ++ P+EA+ R
Sbjct: 654 NAARLDPIEALAR 666
>gi|78059808|ref|YP_366383.1| protein of unknown function DUF214 [Burkholderia sp. 383]
gi|77964358|gb|ABB05739.1| protein of unknown function DUF214 [Burkholderia sp. 383]
Length = 465
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 14/142 (9%)
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
+F + +++ +VL + NT+ +AVM+R+ EIGT+RA+G + +R++F E + G
Sbjct: 328 IFGFIAVLIATIVLFTVGNTMNMAVMERTHEIGTLRALGLRGAGIRRLFVCEGCLLGLCG 387
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS-------AVWTMAAMLL 482
+ G VLAL A +N R G L G+ V++S+ A + + ++
Sbjct: 388 AVAGTVLALAAGVAIN----RAG--LHWTPPGQTDPVALSVRVWGEFGMIARYALGVTVV 441
Query: 483 AGLAANWYPVRLALKISPLEAI 504
A L+A W P A ++ ++A+
Sbjct: 442 ATLSA-WLPAHRAARLPIVDAL 462
>gi|145296543|ref|YP_001139364.1| hypothetical protein cgR_2452 [Corynebacterium glutamicum R]
gi|140846463|dbj|BAF55462.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 853
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 39/270 (14%)
Query: 257 AIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEA 316
+I S+DLS + FAD++G + DT+Q + +G EL N+A
Sbjct: 599 SIDGSLDLSNPGVVASQTFADENGWAVGDTLQLESMG----QTIGDIELIG--TFTGNDA 652
Query: 317 WHHIVIK---LKDSSKTQSVIKTLNDWFKEEGISARAV--NWERGMAMY----------- 360
++I L D+ + + + EEG + N E +A Y
Sbjct: 653 IGGMIISESSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEF 712
Query: 361 ----YSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRK 416
+ I+ + +LA+ +V +I I+NTL + V++R EIG +RA+G K+G VR
Sbjct: 713 AGETVAMIDTMMNILYALLALSVIVAVIGIINTLALNVIERRQEIGMLRAVGVKRGQVRT 772
Query: 417 IFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI--GSAV 474
+ ES ++ G +IG+ + L +G + G+ + ++SI G
Sbjct: 773 MITLESVQIAIYGAVIGIAIGL-----------GLGWAFVTVMSGEGLNAAVSIPWGQVG 821
Query: 475 WTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + G+ A +P A + PL+AI
Sbjct: 822 LMLVGSAVVGVIAALWPAVKASRTPPLDAI 851
>gi|50841543|ref|YP_054770.1| ABC transporter associated permease [Propionibacterium acnes
KPA171202]
gi|50839145|gb|AAT81812.1| ABC transporter associated permease [Propionibacterium acnes
KPA171202]
Length = 823
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 367 TRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMS 426
T+ + + AI +V I+I T ++ + QR +IG MRA+GA G VR+ AE+ +
Sbjct: 245 TKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEAIVLG 304
Query: 427 CVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLA 486
+G ++G+VL ++ A+ + LA +G I V IG + +AA L
Sbjct: 305 VLGSMLGVVLGILLTVAGTAYTGALAFGLAWPWG--DIIVEFLIGIVITVLAAFL----- 357
Query: 487 ANWYPVRLALKISPLEAI 504
P A +++PLEA+
Sbjct: 358 ----PALRATRVAPLEAL 371
>gi|146295699|ref|YP_001179470.1| protein of unknown function DUF214 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409275|gb|ABP66279.1| protein of unknown function DUF214 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 398
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 376 AILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLV 435
AI +V I IMN ++V+V +R+ EIG +A+GAK G +R F ESF +S +G L+G+V
Sbjct: 280 AISLIVSGIGIMNIILVSVTERTKEIGIRKAVGAKSGDIRLQFLIESFLISTIGCLVGIV 339
Query: 436 LALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLA 495
L V + D+L + IS + ++ L GL A W P A
Sbjct: 340 FGLGIVYGV------IPDVLG-------VEAIISPIWIIISIGICYLIGLLAGWAPAERA 386
Query: 496 LKISPLEAI 504
+++P+ A+
Sbjct: 387 SRLNPIVAL 395
>gi|77980018|ref|ZP_00835433.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Yersinia intermedia ATCC
29909]
Length = 415
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 254 SWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIV-STLVMAVKDKSSDIAVLRTLGAK 312
Query: 411 KGFVRKIF----FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRV 466
G +R IF F S GV++G+++++ ++ + +G G +
Sbjct: 313 DGLIRAIFIWYGLLAGFIGSISGVIVGVIVSMQLTNIIRGLERLIGH---QFLSGDIYFI 369
Query: 467 SISIGSAVW-----TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
W +A L+ L A+WYP R A +I P ++
Sbjct: 370 DFLPSELHWFDVACVLATALVLSLIASWYPARRASRIDPARVLS 413
>gi|84320967|ref|ZP_00969334.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Pseudomonas aeruginosa C3719]
gi|84327169|ref|ZP_00975192.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Pseudomonas aeruginosa 2192]
gi|60280008|gb|AAX16350.1| PA2390 [Pseudomonas aeruginosa]
gi|126167325|gb|EAZ52836.1| hypothetical protein PACG_01299 [Pseudomonas aeruginosa C3719]
gi|126194201|gb|EAZ58264.1| hypothetical protein PA2G_01495 [Pseudomonas aeruginosa 2192]
Length = 663
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML ++ + L+V +MN +++ V +R+ EIG A GA++G + + F E+ +S VG
Sbjct: 541 MLGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVG 600
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L G+ LAL V+ + G Q+ V+ S+ + V + L+ GL +
Sbjct: 601 GLAGIALALCIGGVL-------------LLG--QVAVAFSLSAIVGAFSCALVTGLVFGF 645
Query: 490 YPVRLALKISPLEAI 504
P R A ++ P+ A+
Sbjct: 646 MPARKAAQLDPVAAL 660
>gi|107101834|ref|ZP_01365752.1| hypothetical protein PaerPA_01002879 [Pseudomonas aeruginosa PACS2]
Length = 663
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML ++ + L+V +MN +++ V +R+ EIG A GA++G + + F E+ +S VG
Sbjct: 541 MLGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVG 600
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L G+ LAL V+ + G Q+ V+ S+ + V + L+ GL +
Sbjct: 601 GLAGIALALCIGGVL-------------LLG--QVAVAFSLSAIVGAFSCALVTGLVFGF 645
Query: 490 YPVRLALKISPLEAI 504
P R A ++ P+ A+
Sbjct: 646 MPARKAAQLDPVAAL 660
>gi|89211338|ref|ZP_01189708.1| Protein of unknown function DUF214 [Halothermothrix orenii H 168]
gi|89159080|gb|EAR78758.1| Protein of unknown function DUF214 [Halothermothrix orenii H 168]
Length = 422
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 319 HIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I+I+++D + + L+D +E G S RA +W + + + R+ +L I+
Sbjct: 227 QIIIRVEDRIRAVETARLLSDDLQEAGSSLRAFSWRKSAEYIVALNKAERVETQMILGII 286
Query: 379 SVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLAL 438
++ I I+N +V+A ++R EIG M+A+G K+ + +F E+ +S +G +IG L
Sbjct: 287 LLIAAIGIINFVVLAALERMEEIGMMKALGLKQWEIVIVFVMEAVGVSLIGGIIG---CL 343
Query: 439 IAAAVVNAFDIRVGDILAAMFGGKQIRVSISI------------GSAVWTMAAMLLAGLA 486
+ AVV DI + GG+ S+ I GS ++ + ++ L
Sbjct: 344 VGGAVVAYLVFYGVDIFS--LGGEDAISSMGIPVLGRIYGGFNPGSFIFVFSYSVIVSLL 401
Query: 487 ANWYPVRLALKISPLEAI 504
+ +P R A + P++AI
Sbjct: 402 VSIFPARWAARKDPVKAI 419
>gi|106895029|ref|ZP_01362138.1| Protein of unknown function DUF214 [Clostridium sp. OhILAs]
gi|106773688|gb|EAT30263.1| Protein of unknown function DUF214 [Clostridium sp. OhILAs]
Length = 442
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 23/166 (13%)
Query: 344 EGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIV---IMNTLVVAVMQRSSE 400
+G+S ++N M A + R++ + + I +V +L+ IMN ++VAV +R+SE
Sbjct: 296 DGMSITSLN-----QMIDEADQANRVMTLLLGGIAAVSLLVGGLGIMNIMLVAVTERTSE 350
Query: 401 IGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFG 460
IG RA+GAK+ + F E+F++S +GV+ G+ + + + F G A F
Sbjct: 351 IGVRRALGAKQLDMLAQFLLEAFYVSIIGVIAGVAIGVWGIQIFANF----GFPTAISFE 406
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAINR 506
+I +++GS GL YP A + P+EA+ R
Sbjct: 407 AIRIAAIVALGS-----------GLLFGVYPAMSASALPPVEALRR 441
>gi|116050331|ref|YP_790852.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa UCBPP-PA14]
gi|122259452|sp|Q02MI4|MACB_PSEAB Macrolide export ATP-binding/permease protein macB
gi|60279959|gb|AAX16304.1| PA2390 [Pseudomonas aeruginosa]
gi|115585552|gb|ABJ11567.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 663
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML ++ + L+V +MN +++ V +R+ EIG A GA++G + + F E+ +S VG
Sbjct: 541 MLGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVG 600
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L G+ LAL V+ + G Q+ V+ S+ + V + L+ GL +
Sbjct: 601 GLAGIALALCIGGVL-------------LLG--QVAVAFSLSAIVGAFSCALVTGLVFGF 645
Query: 490 YPVRLALKISPLEAI 504
P R A ++ P+ A+
Sbjct: 646 MPARKAAQLDPVAAL 660
>gi|15597586|ref|NP_251080.1| probable ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa PAO1]
gi|81857201|sp|Q9I190|MACB_PSEAE Macrolide export ATP-binding/permease protein macB
gi|9948431|gb|AAG05778.1|AE004665_5 probable ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa PAO1]
Length = 663
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML ++ + L+V +MN +++ V +R+ EIG A GA++G + + F E+ +S VG
Sbjct: 541 MLGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVG 600
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L G+ LAL V+ + G Q+ V+ S+ + V + L+ GL +
Sbjct: 601 GLAGIALALCIGGVL-------------LLG--QVAVAFSLSAIVGAFSCALVTGLVFGF 645
Query: 490 YPVRLALKISPLEAI 504
P R A ++ P+ A+
Sbjct: 646 MPARKAAQLDPVAAL 660
>gi|60279990|gb|AAX16333.1| PA2390 [Pseudomonas aeruginosa]
Length = 663
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 374 MLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
ML ++ + L+V +MN +++ V +R+ EIG A GA++G + + F E+ +S VG
Sbjct: 541 MLGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQGDILRQFLTEAAMLSVVG 600
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L G+ LAL V+ + G Q+ V+ S+ + V + L+ GL +
Sbjct: 601 GLAGIALALCIGGVL-------------LLG--QVAVAFSLSAIVGAFSCALVTGLVFGF 645
Query: 490 YPVRLALKISPLEAI 504
P R A ++ P+ A+
Sbjct: 646 MPARKAAQLDPVAAL 660
>gi|34499397|ref|NP_903612.1| hypothetical protein CV_3942 [Chromobacterium violaceum ATCC 12472]
gi|34105249|gb|AAQ61604.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 430
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 326 DSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGT-RILFITMLAILSVVVLI 384
D + T ++ L F+ G+ W+ M++YY ++ ++F +L I+ +V++
Sbjct: 251 DEATTIALRDRLQADFQAAGLDLEVRTWQ-DMSLYYKQVKNMYDLIFTLLLGIVLAIVVL 309
Query: 385 VIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVV 444
I N + ++V++R+ EIGT+RA+G ++ V +F AE+ +G L+GL+L +A+ V
Sbjct: 310 SIANAMSMSVLERTREIGTLRAMGYRRVRVVGLFIAEACLQVALGCLLGLLLFWLASHAV 369
Query: 445 NAFDIRVGDILAAMFGGKQIRVSISIG-SAVWTMAAMLLAG---LAANWYPVRLA 495
NA +I+ + G + V + I T+ AMLL G + A W P R A
Sbjct: 370 NAANIQY------VPPGNSVSVPLYIDFDPARTVFAMLLLGTLSIVAAWMPARKA 418
>gi|119356919|ref|YP_911563.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
gi|119354268|gb|ABL65139.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 429
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 278 DSGADIIDT-----VQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQS 332
D +++D V+++ ID L+ T + +L + IV+ L + T +
Sbjct: 196 DGAVNVLDVTVAGVVKSTMKSIDRYYLV--TNISTAQSLMQTDRVSKIVVVLDKTDNTAA 253
Query: 333 VIKTLNDWFKEEGISA--RAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTL 390
V ++ G A + W++ Y+S + RI+F I+ V+V + NT+
Sbjct: 254 VTPHVSAAINGSGKPALFTVIPWDQLAEYYHSIRDAYRIIFSFTGIIVVVIVFLSCTNTM 313
Query: 391 VVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIR 450
+++ M+R EIGT++AIG ++ +F E FF+ + ++ G+ L +I + ++N R
Sbjct: 314 LMSTMERVREIGTLKAIGIANPWISLMFLFEGFFIGLMSLVGGMALKIIFSFIINNSGFR 373
Query: 451 V 451
+
Sbjct: 374 M 374
>gi|125718340|ref|YP_001035473.1| ABC-type antimicrobial peptide transport system, permease
component, putative [Streptococcus sanguinis SK36]
gi|125498257|gb|ABN44923.1| ABC-type antimicrobial peptide transport system, permease
component, putative [Streptococcus sanguinis SK36]
Length = 422
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 384 IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAV 443
I +MN ++V+V +R+ EIG +A+GA +G + F ES ++ +G LIGLVLA A+V
Sbjct: 308 IGVMNIMLVSVTERTREIGLRKALGATRGNILMQFLIESMILTLIGGLIGLVLAAGLASV 367
Query: 444 VNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEA 503
+G ++ M G + VS+++ +A + G+ P A K+ P+EA
Sbjct: 368 -------LGSAMSQMLEGTPVTVSLTVSIISLLFSATI--GVLFGILPANKASKLDPIEA 418
Query: 504 I 504
+
Sbjct: 419 L 419
>gi|54026627|ref|YP_120869.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
gi|54018135|dbj|BAD59505.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
Length = 852
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 374 MLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+LA+ V+ ++ I+NTL ++V++R EIG +RA+GA + +R+ + ES ++ G ++G
Sbjct: 729 LLALAVVIAILGIINTLALSVVERRREIGMLRAVGAMRAQIRRTIYLESVLIAVFGAIVG 788
Query: 434 LVLALIAAAVVNAFDIRVGDILAAM-FGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPV 492
++L L I VG + FG QI ++ G V + A + G+ A +P
Sbjct: 789 VLLGL---------GIGVGFLRTLRDFGIDQI--AVPWGQLVAVLVASAIVGVLAALWPG 837
Query: 493 RLALKISPLEAI 504
A + PL AI
Sbjct: 838 IRAARTPPLAAI 849
>gi|114562987|ref|YP_750500.1| protein of unknown function DUF214 [Shewanella frigidimarina NCIMB
400]
gi|114334280|gb|ABI71662.1| protein of unknown function DUF214 [Shewanella frigidimarina NCIMB
400]
Length = 401
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 311 LADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEE-GISARAVNWERGMAMYYSA--IEGT 367
LA N+ I I +KD TQ V + + + +E ISA + M + A + GT
Sbjct: 212 LAGNQDVRLIQISVKDGVSTQKVEQAVTELLRERRHISANEDDDFSVMDLKEIANMLSGT 271
Query: 368 RILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESF 423
+ +L ++ V L+V IMN ++V+V +R+ EIG AIGA + V F E+
Sbjct: 272 TRVLTMLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALEREVLLQFLVEAI 331
Query: 424 FMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA 483
+S +G ++G++LAL A +V A I+V + +SI + S +++ A ++
Sbjct: 332 VLSSLGGIVGIILAL-AGSVALANLIQVPFVF---------NMSIVVVSFLFSAAVGVIF 381
Query: 484 GLAANWYPVRLALKISPLEAI 504
G ++P R A ++ P+EA+
Sbjct: 382 G----YFPARKAAQLDPIEAL 398
>gi|149908118|ref|ZP_01896782.1| export ABC transporter permease protein [Moritella sp. PE36]
gi|149808660|gb|EDM68593.1| export ABC transporter permease protein [Moritella sp. PE36]
Length = 416
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 373 TMLAILSVVVL----IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
+ L I+ +V L I I N + AV + + +IG A+GA ++ + +S F +
Sbjct: 281 SFLGIIGLVTLGVAGIGIANVMYAAVKRATRDIGLRMAVGASPATIKAHYLTQSLFTMAI 340
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G L+GL + + + + AF + G+ L G +S SI V + A+ L G+AA
Sbjct: 341 GGLLGLGMTVGLISSIQAFPL-TGNSLYEELGKPTPELSFSIIGLV--ILALGLVGVAAA 397
Query: 489 WYPVRLALKISPLEAI 504
W+P A I+PLEA+
Sbjct: 398 WFPANRAASITPLEAL 413
>gi|156934625|ref|YP_001438541.1| hypothetical protein ESA_02459 [Enterobacter sakazakii ATCC
BAA-894]
gi|156532879|gb|ABU77705.1| hypothetical protein ESA_02459 [Enterobacter sakazakii ATCC
BAA-894]
Length = 647
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 16/139 (11%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+K V + F E+ + V
Sbjct: 522 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARKSDVLQQFLIEAVLVCLV 581
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVS-ISIGSAVWTMAAMLLAGLAA 487
G +G+ L+L+ A L + G +I S +++ +A +A G+
Sbjct: 582 GGALGIGLSLLIAFA-----------LQLILPGWEIGFSPVALLTAFLCSSA---TGVLF 627
Query: 488 NWYPVRLALKISPLEAINR 506
W P R A +++P++A+ R
Sbjct: 628 GWLPARNAARLNPVDALAR 646
>gi|42527356|ref|NP_972454.1| ABC transporter, permease protein, putative [Treponema denticola
ATCC 35405]
gi|41817941|gb|AAS12365.1| ABC transporter, permease protein, putative [Treponema denticola
ATCC 35405]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 374 MLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+L +L V+ +I I NT + V +R E+GTMR+ G + +R++F AE+ F+S G + G
Sbjct: 310 ILIVLLVITMIGISNTFKIIVYERRGEVGTMRSCGVMRKHIRRLFLAEASFLSLFGAVCG 369
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLL 482
VLA++ V++ I V + V G W ++A+L+
Sbjct: 370 FVLAVLVMQVISFIPIAVDSPFS---------VFTKNGYFAWNLSALLV 409
>gi|73670883|ref|YP_306898.1| hypothetical protein Mbar_A3445 [Methanosarcina barkeri str.
Fusaro]
gi|72398045|gb|AAZ72318.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 389
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 350 AVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGA 409
AV+W A + + ++ ++ + I NTL+ V QR+ EIG ++A+GA
Sbjct: 234 AVSWIEANAEILNLLNTQKVFVNVFYILIYGIAGFGIANTLITIVAQRTREIGILKAMGA 293
Query: 410 KKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSIS 469
+ + +F +S + +G+++G +L IA + ++ I V + FG + + + +
Sbjct: 294 SQKSIMIVFLFQSVILGAMGLVLGTILGYIATITLQSYKIAVPQEM--YFGLQTLPLEVE 351
Query: 470 IGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ V+ + + + YP R A K+ P++AI
Sbjct: 352 PLNFVYAAFFAFIINIISGIYPARKAAKLDPVKAI 386
>gi|83717068|ref|YP_439986.1| macrolide-specific ABC-type efflux carrier [Burkholderia
thailandensis E264]
gi|122064318|sp|Q2T4B3|MACB_BURTA Macrolide export ATP-binding/permease protein macB
gi|83650893|gb|ABC34957.1| macrolide-specific ABC-type efflux carrier [Burkholderia
thailandensis E264]
Length = 653
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L ++++A++S+VV I +MN ++V+V +R+ EIG A+GA++ + + F E+ + +
Sbjct: 528 LLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQADIMQQFLVEAVTVCLM 587
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G IG+VL+L + V + F Q ++ S GS V L G+
Sbjct: 588 GGAIGIVLSLGMSFVFSLF-------------VDQWKMVFSAGSIVSAFLCSTLIGVVFG 634
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A ++ P++A+ R
Sbjct: 635 FMPARNASRLDPIDALAR 652
>gi|148826796|ref|YP_001291549.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittGG]
gi|148718038|gb|ABQ99165.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittGG]
Length = 416
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAF----------DIRVGDILAAMFGGKQIRVSISI 470
G LIG+VL +I A + F + GD+ F ++ S
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWS--- 380
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + A L L A+ YP A K+ P + ++
Sbjct: 381 -DVLMVLIAALALSLIASLYPASRAAKLQPAQVLS 414
>gi|153092764|gb|EDN73807.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica PHL213]
Length = 640
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 263 DLSLSEKSEDE-LFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIV 321
DL L+E E + + D II Q SN+ L + ++ + +
Sbjct: 406 DLGLTEPVEGKTILVDKKPLQIIGVAQQSNNMNQSSLTLWAPYTTIMQRISGAKQIDSLT 465
Query: 322 IKLKDSSKTQSVIKTLNDWF-KEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSV 380
+K+KD ++Q+ K++ + + G + + ++ T L I+ +A++S+
Sbjct: 466 VKIKDDIESQTAEKSIAELLVAKHGKKDFFIMNSDTIKQTITSTTNTMTLLISSIALISL 525
Query: 381 VVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALI 439
+V I +MN ++V+V +R+ EIG AIGAK+ + + F E+ + +G +IG+ L+
Sbjct: 526 IVGGIGVMNIMLVSVTERTREIGVRMAIGAKQRNILQQFLIEAVVICLIGGVIGI---LL 582
Query: 440 AAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKIS 499
A+A++ AF+ G ++ +S S + + L G+ + P R A +++
Sbjct: 583 ASAIIWAFNTL----------GTNFKMMLSPESVIIAVLCSTLIGVVFGYIPARNAAQLN 632
Query: 500 PLEAI 504
P+ A+
Sbjct: 633 PITAL 637
>gi|52425184|ref|YP_088321.1| hypothetical protein MS1129 [Mannheimia succiniciproducens MBEL55E]
gi|81825545|sp|Q65TH4|MACB_MANSM Macrolide export ATP-binding/permease protein macB
gi|52307236|gb|AAU37736.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 643
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 15/189 (7%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFK-EEGISARAVNWERGMAMYYSAIEGTRILFITMLAIL 378
I +K+ D+ T K+L ++ G + + + GT L I+ +A +
Sbjct: 467 ITVKIADNVNTAVAEKSLTEYLTVRHGKKDFFIMNSDTIKQTIESTTGTMKLLISSIAFI 526
Query: 379 SVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
S++V I +MN ++V+V +R+ EIG AIGA+K + + F E+ + +G + G++L+
Sbjct: 527 SLIVGGIGVMNIMLVSVTERTKEIGVRMAIGARKSNILQQFLIEAILICMIGGISGIMLS 586
Query: 438 LIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALK 497
LI + N F M + + SI +AV L G+ + P + A +
Sbjct: 587 LIIGGIFNVF----------MTDFTMVFSTFSIVAAVLCST---LIGVIFGYMPAKNAAQ 633
Query: 498 ISPLEAINR 506
+ P+ A+ R
Sbjct: 634 LDPITALAR 642
>gi|148826070|ref|YP_001290823.1| hypothetical protein CGSHiEE_05320 [Haemophilus influenzae PittEE]
gi|148716230|gb|ABQ98440.1| hypothetical protein CGSHiEE_05320 [Haemophilus influenzae PittEE]
Length = 416
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKEFDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAF----------DIRVGDILAAMFGGKQIRVSISI 470
G LIG+VL +I A + F + GD+ F ++ S
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWS--- 380
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + A L L A+ YP A K+ P + ++
Sbjct: 381 -DVLMVLIAALALSLIASLYPASRAAKLQPAQVLS 414
>gi|153949780|ref|YP_001400579.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pseudotuberculosis IP 31758]
gi|152961275|gb|ABS48736.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pseudotuberculosis IP 31758]
Length = 415
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 254 SWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIV-STLVMAVKDKSSDIAVLRTLGAK 312
Query: 411 KGFVRKIF----FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFG 460
G +R IF S G +IG++++L ++ + V GDI F
Sbjct: 313 DGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQFLSGDIYFIDFL 372
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
++R +A L+ L A+WYP R A +I P ++
Sbjct: 373 PSELRWF----DVACVLATALVLSLIASWYPARRASRIDPARVLS 413
>gi|145642057|ref|ZP_01797628.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae R3021]
gi|145273237|gb|EDK13112.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 22.4-21]
Length = 416
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAF----------DIRVGDILAAMFGGKQIRVSISI 470
G LIG+VL +I A + F + GD+ F ++ S
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWS--- 380
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + A L L A+ YP A K+ P + ++
Sbjct: 381 -DVLMVLIAALALSLIASLYPASRAAKLQPAQVLS 414
>gi|77635900|ref|ZP_00797979.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Yersinia pestis Angola]
gi|89105589|ref|ZP_01178106.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Yersinia pestis biovar
Orientalis str. IP275]
gi|108807892|ref|YP_651808.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Antiqua]
gi|108812166|ref|YP_647933.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Nepal516]
gi|145599103|ref|YP_001163179.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Pestoides F]
gi|108775814|gb|ABG18333.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Nepal516]
gi|108779805|gb|ABG13863.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Antiqua]
gi|145210799|gb|ABP40206.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Pestoides F]
Length = 415
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 254 SWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIV-STLVMAVKDKSSDIAVLRTLGAK 312
Query: 411 KGFVRKIF----FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVG------DILAAMFG 460
G +R IF S G +IG++++L ++ + VG DI F
Sbjct: 313 DGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQFLSSDIYFIDFL 372
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
++R +A L+ L A+WYP R A +I P ++
Sbjct: 373 PSELRWF----DVACVLATALVLSLIASWYPARRASRIDPARVLS 413
>gi|16121896|ref|NP_405209.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CO92]
gi|22125681|ref|NP_669104.1| kinase [Yersinia pestis KIM]
gi|45441568|ref|NP_993107.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis biovar Microtus str. 91001]
gi|149366407|ref|ZP_01888441.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CA88-4125]
gi|21958595|gb|AAM85355.1|AE013781_6 putative kinase [Yersinia pestis KIM]
gi|45436429|gb|AAS61984.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis biovar Microtus str. 91001]
gi|115347375|emb|CAL20273.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CO92]
gi|149290781|gb|EDM40856.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CA88-4125]
Length = 416
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 255 SWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIV-STLVMAVKDKSSDIAVLRTLGAK 313
Query: 411 KGFVRKIF----FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVG------DILAAMFG 460
G +R IF S G +IG++++L ++ + VG DI F
Sbjct: 314 DGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQFLSSDIYFIDFL 373
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
++R +A L+ L A+WYP R A +I P ++
Sbjct: 374 PSELRWF----DVACVLATALVLSLIASWYPARRASRIDPARVLS 414
>gi|156111027|gb|EDO12772.1| hypothetical protein BACOVA_01586 [Bacteroides ovatus ATCC 8483]
Length = 413
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 329 KTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVV-LIVIM 387
K + VIK + ++ + +N E +M + G IL + M+ + +++ I +
Sbjct: 244 KMEQVIKAAHYISPDDKQAVMCLNAEAMFSMVDNLFTGINIL-VWMVGLGTLLAGAIGVS 302
Query: 388 NTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAF 447
N ++V V +R++EIG RAIGA+ + + +ES ++ + + G+ A++ +V
Sbjct: 303 NIMMVTVKERTTEIGIRRAIGARPKDILQQILSESMVLTTIAGMCGISFAVMVLQLVE-- 360
Query: 448 DIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ A G R ++ G A+ T A ++ G+ A P A+ I P+EAI
Sbjct: 361 -------MGANADGGDTRFQVTFGLAIGTCALLIALGMLAGLAPAYRAMAIKPIEAI 410
>gi|109647405|ref|ZP_01371308.1| protein of unknown function DUF214 [Desulfitobacterium hafniense
DCB-2]
gi|109640495|gb|EAT50050.1| protein of unknown function DUF214 [Desulfitobacterium hafniense
DCB-2]
Length = 443
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 310 NLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRI 369
N + +++ + ++K+ SK V K + K G R++ R M A + ++
Sbjct: 261 NTTEKKSYQNALVKVDHISKVAEVEKEI----KRLGFDTRSMESIR-EPMEKEARQ-KQL 314
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
+ + AI V I I NT+++++ +R+ EIG M+A+G +R IF ES + +G
Sbjct: 315 MLGGLGAISLFVAAIGITNTMIMSISERTKEIGIMKALGCYVKDIRIIFLTESGIIGFLG 374
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
++G V++LI + ++N ++ GG ++ + I + + + + G+ + +
Sbjct: 375 GVVGNVVSLIISLIMN--------FVSEGAGGSKLSI-IPLWLIGFAVVFSIFIGVGSGY 425
Query: 490 YPVRLALKISPLEAI 504
YP A+KIS LEAI
Sbjct: 426 YPANKAVKISALEAI 440
>gi|59713647|ref|YP_206422.1| Lipoprotein releasing system transmembrane protein LolE [Vibrio
fischeri ES114]
gi|59481895|gb|AAW87534.1| Lipoprotein releasing system transmembrane protein LolE [Vibrio
fischeri ES114]
Length = 414
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W + Y I+ R I+++ M+ ++ V ++ +TL++AV R+ +I +R +GA
Sbjct: 253 SWIQKYGYLYRDIQLVRSIMYLVMVLVIGVACFNIV-STLMMAVKDRAGDIAILRTMGAN 311
Query: 411 KGFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFG 460
G +++IF + F S G ++G V+AL ++ A + + GDI F
Sbjct: 312 DGLIKRIFVCQGIFSGVTGSIAGSVLGSVVALNLTPMIKALESLIGHQFLSGDIYFVDFL 371
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ S A+ T A+LL+ + A WYP R A ++ P
Sbjct: 372 PSQLVWS---DVAIVTCTAILLSSI-ATWYPARRASRLQP 407
>gi|126178444|ref|YP_001046409.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
gi|125861238|gb|ABN56427.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
Length = 399
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 355 RGMAMYYSAIEGTRILFITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGF 413
R M Y I +F+ + +S++V V I+N + ++V +R EIG MR+IGA +
Sbjct: 246 RDMLRQYEEIYQQITVFLLGIGGISLIVAAVNILNVMYISVTERIREIGVMRSIGALRRE 305
Query: 414 VRKIFFAESFFMSCVGVLIGLVLA-----LIAAAVVNAFDIRVGDILAAMFGGKQIRVSI 468
V ++F E+ + +G +IG VL+ LI+ A V F FG +
Sbjct: 306 VLRMFLYEAVLLGLIGSIIGGVLSTAFGYLISLAAVEVF------TAGTTFGENITIFDL 359
Query: 469 S-IGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAINR 506
S +G V+ MA + +AA +YP A +++P++A+ +
Sbjct: 360 SAVGYIVFGMAFGIGTSIAAGFYPAWNASQLAPVDAMRQ 398
>gi|147920314|ref|YP_685915.1| predicted ABC-type transport system, permease component [uncultured
methanogenic archaeon RC-I]
gi|110621311|emb|CAJ36589.1| predicted ABC-type transport system, permease component [uncultured
methanogenic archaeon RC-I]
Length = 408
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 14/125 (11%)
Query: 380 VVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALI 439
VV I IMN +++ V +R+ EIG M+A+GA VR +F ES + + LIGL LA +
Sbjct: 295 VVGGIGIMNVMLLTVKERTKEIGLMKAVGATTANVRNLFLIESMSLGFISGLIGLALAFV 354
Query: 440 AAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKIS 499
+V++ +G + + +S+ +A +A LA A YP A K+
Sbjct: 355 VMLIVSSV---IG-----------MNMGVSLTNAAIGIAFGCLATTIAGVYPASQAAKLD 400
Query: 500 PLEAI 504
P+EA+
Sbjct: 401 PIEAL 405
>gi|149192124|ref|ZP_01870346.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio shilonii AK1]
gi|148834027|gb|EDL51042.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio shilonii AK1]
Length = 412
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R+SEI +R +GA
Sbjct: 251 SWKQKYGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRASEIAILRTMGATD 310
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMF-GGKQIRVSISI 470
G +++IF + F VG ++G +L + A + + ++ F G V
Sbjct: 311 GLIKRIFIWQGVFSGVVGSIVGGMLGSLVALNLTPLVSGLESLIGHKFLSGDIYFVDFLP 370
Query: 471 GSAVWTMAAML-----LAGLAANWYPVRLALKISPLEAIN 505
VW+ A++ + L A WYP A +++P ++
Sbjct: 371 SELVWSDVALVAGTATVLSLIATWYPATKASQLNPASVLS 410
>gi|116617457|ref|YP_817828.1| ABC-type antimicrobial peptide transport system, ATPase component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116096304|gb|ABJ61455.1| ABC-type antimicrobial peptide transport system, ATPase component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 662
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 318 HHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAI 377
+++ +K+ D+ +S + +N K+ G A + + I + +A
Sbjct: 482 NYLTLKVNDTENVKSTVSAVNK-IKDNGKQAVVAVSIGSVLDTINTITSLASYVLAAIAG 540
Query: 378 LSVVV-LIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
+S++V I+I+ T ++V +R+ EIG +RA+GA+ +R +F E+ M + ++G+V
Sbjct: 541 ISLIVSAIMIIVTTYMSVSERTKEIGVLRALGARSKDIRGLFTNEALLMGIISAVLGIVT 600
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIR-VSISIGSAVWTMAAMLLAGLAANWYPVRLA 495
A + +N AA++G + V +S+G+ ++ + L+ L A++ P R A
Sbjct: 601 AYLGQFAMN----------AALYGLIKFDIVQVSLGNVIFAVVISLVIALVASFVPSRRA 650
Query: 496 LKISPLEAI 504
++ ++A+
Sbjct: 651 ANLNTIDAL 659
>gi|148378094|ref|YP_001252635.1| ABC transporter permease protein [Clostridium botulinum A str. ATCC
3502]
gi|153933872|ref|YP_001382493.1| putative macrolide efflux ABC transporter, permease protein
[Clostridium botulinum A str. ATCC 19397]
gi|153935428|ref|YP_001386045.1| putative macrolide efflux ABC transporter, permease protein
[Clostridium botulinum A str. Hall]
gi|153939259|ref|YP_001389451.1| putative macrolide efflux ABC transporter, permease protein
[Clostridium botulinum F str. Langeland]
gi|148287578|emb|CAL81643.1| ABC transporter permease protein [Clostridium botulinum A str. ATCC
3502]
gi|152929916|gb|ABS35416.1| putative macrolide efflux ABC transporter, permease protein
[Clostridium botulinum A str. ATCC 19397]
gi|152931342|gb|ABS36841.1| putative macrolide efflux ABC transporter, permease protein
[Clostridium botulinum A str. Hall]
gi|152935155|gb|ABS40653.1| putative macrolide efflux ABC transporter, permease protein
[Clostridium botulinum F str. Langeland]
Length = 402
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 22/141 (15%)
Query: 370 LFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM 425
+F T + ++ + L+V +MN ++V+V +R+ EIG +A+GA + F ES +
Sbjct: 275 IFTTFIGAVAAISLLVGGIGVMNIMLVSVTERTREIGIRKALGATTKNILIQFLTESVII 334
Query: 426 SCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA-- 483
S +G LIG++L ++ A ++ GK I++S S+ A +A + +
Sbjct: 335 SLIGGLIGMILGIVFAEII----------------GKFIKISPSVSIAAILIAILFSSSV 378
Query: 484 GLAANWYPVRLALKISPLEAI 504
G+ YP + A K++P++A+
Sbjct: 379 GIFFGIYPAKKAAKLNPIDAL 399
>gi|153889535|ref|ZP_02010646.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
gi|151584416|gb|EDN47858.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
Length = 415
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
LFIT LA+ V I IMN V+V +R+ EIGT +A+GA++ + F E+ + VG
Sbjct: 293 LFITGLALF--VGAIGIMNITYVSVKERTREIGTRKALGARRRTILLQFLIEAVTICIVG 350
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
+ GLV+A +A+ V ++ +F G + V ++I +L G+ + +
Sbjct: 351 GITGLVMAGVASVAV----AKIAPTFPLVFSGGLVAVGLAIS---------VLTGIFSGF 397
Query: 490 YPVRLALKISPLEAI 504
P A K+ P+EA+
Sbjct: 398 APAWQASKLDPVEAL 412
>gi|134095407|ref|YP_001100482.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Herminiimonas arsenicoxydans]
gi|133739310|emb|CAL62359.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Herminiimonas arsenicoxydans]
Length = 421
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W + +++A++ + + +L ++ V +++TLV+ V + ++I +R +GA
Sbjct: 260 DWSKQNRNWFAAVQTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASP 319
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
G + KIF + + +G IG+ ++ AA ++ + IL F K I + S+
Sbjct: 320 GSIMKIFMIQGALVGLIGTAIGVGGGVLIAANIDVIVPFIERILGVQFLPKDIYLISSLP 379
Query: 472 S-----AVWTMA--AMLLAGLAANWYPVRLALKISPLEAI 504
S VWT+ A++LA L A YP A ++ P EA+
Sbjct: 380 SDLRWPDVWTIGGVAVVLAFL-ATLYPSWWAARVKPAEAL 418
>gi|77963639|ref|ZP_00827447.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Yersinia mollaretii ATCC
43969]
Length = 415
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 254 SWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIV-STLVMAVKDKSSDIAVLRTLGAK 312
Query: 411 KGFVRKIF----FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRV 466
G +R IF F S GV+ G++++L ++ + +G G +
Sbjct: 313 DGLIRAIFIWYGLLAGFIGSISGVVAGVIISLQLTNIIRGLEKLIGH---QFLSGDIYFI 369
Query: 467 SISIGSAVW-----TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
W +A L+ L A+WYP R A +I P ++
Sbjct: 370 DFLPSELHWFDVACVLATALVLSLIASWYPARRASRIDPARVLS 413
>gi|33152155|ref|NP_873508.1| macrolide-specific ABC-type efflux carrier [Haemophilus ducreyi
35000HP]
gi|81836044|sp|Q7VMF9|MACB_HAEDU Macrolide export ATP-binding/permease protein macB
gi|33148377|gb|AAP95897.1| macrolide-specific ABC-type efflux carrier [Haemophilus ducreyi
35000HP]
Length = 696
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L I+ +A +S++V I IMN ++V+V++R+ EIG A+GAK+ +R F ES +S +
Sbjct: 571 LMISSIAFISLIVGGIGIMNIMLVSVIERTKEIGIRIAVGAKERDIRFQFLIESTMVSLI 630
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G IG+ AL+ + + I++ ++ S + + G+
Sbjct: 631 GGCIGVGCALLFGGLFS-------------LAETSIKIQFTLSSFLIAFLCSSMIGIVFG 677
Query: 489 WYPVRLALKISPLEAINR 506
++P R A K+ P++A++R
Sbjct: 678 YFPARNAAKLRPVDALSR 695
>gi|91225266|ref|ZP_01260434.1| hypothetical protein V12G01_20903 [Vibrio alginolyticus 12G01]
gi|91189905|gb|EAS76177.1| hypothetical protein V12G01_20903 [Vibrio alginolyticus 12G01]
Length = 414
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R++EI +R +GAK
Sbjct: 253 SWQQKFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAAEIAILRTMGAKD 312
Query: 412 GFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFGG 461
+++IF + F S VG +IG+++AL ++ + + GDI F
Sbjct: 313 SLIKRIFVWQGVFSGVFGSLVGSVIGVLVALNLTPLIKGLESLIGHQFLSGDIYFVDFLP 372
Query: 462 KQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ A+ ++ A++L+ L A WYP A +++P
Sbjct: 373 SQLHWP---DVALVSVTAIVLS-LLATWYPASRAARLNP 407
>gi|145634885|ref|ZP_01790592.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittAA]
gi|145267751|gb|EDK07748.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittAA]
Length = 416
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 22/259 (8%)
Query: 260 DSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWH 318
D V L +S+++ DE FA + + + + + ++DY L +
Sbjct: 165 DWVTLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQIT 224
Query: 319 HIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTR-ILFITMLA 376
+ +KL D +++ + LND+ + + NW Y I+ R +++I M+
Sbjct: 225 GVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMYRDIQLIRTVMYIAMVL 280
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
++ V ++ +TL++AV + +I MR +GA F+++IF G LIG+VL
Sbjct: 281 VIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGIVL 339
Query: 437 ALIAAAVVNAF----------DIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLA 486
+I A + F + GD+ F ++ S + + A L L
Sbjct: 340 GIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWS----DVLMVLIAALALSLI 395
Query: 487 ANWYPVRLALKISPLEAIN 505
A+ YP A K+ P + ++
Sbjct: 396 ASLYPASRAAKLQPAQVLS 414
>gi|53732822|ref|ZP_00349581.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Haemophilus influenzae
R2846]
Length = 416
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGSTELRDRLNLADNEA 316
+ D + L +S+++ DE FA + + I + + ++DY L +
Sbjct: 163 VGDWITLLISQQNGDEQFAQPTREPVQITAILRLDGQLDYSYALLPLAQAQTFLTYQPDQ 222
Query: 317 WHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTR-ILFITM 374
+ +KL D +++ + LND+ + + NW Y I+ R +++I M
Sbjct: 223 ITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMYRDIQLIRTVMYIAM 278
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGL 434
+ ++ V ++ +TL++AV + +I MR +GA F+++IF G LIG+
Sbjct: 279 VLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGI 337
Query: 435 VLALIAAAVVNAFDIRVGDILA-AMFGGKQIRVSISIGSAVW-----TMAAMLLAGLAAN 488
VL +I A + F + I+ + G V W + A L L A+
Sbjct: 338 VLGIILALNLTTFIQCIEWIIGKKLLSGDVYFVDFLPSELHWLDVLMVLIAALALSLMAS 397
Query: 489 WYPVRLALKISPLEAIN 505
+YP A K+ P + ++
Sbjct: 398 FYPASRAAKLQPAQVLS 414
>gi|90413107|ref|ZP_01221104.1| putative ABC transporter, integral membrane protein [Photobacterium
profundum 3TCK]
gi|90325950|gb|EAS42396.1| putative ABC transporter, integral membrane protein [Photobacterium
profundum 3TCK]
Length = 414
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W + Y I+ R I+++ M+ ++ V +I +TL++AV R+ +I +R +GA
Sbjct: 253 SWTQKYGYLYRDIQMVRTIMYLVMVLVIGVACFNII-STLMMAVKDRAPDIAILRTMGAT 311
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAA----AVVNAFDIRV------GDILAAMFG 460
G V+ IF VG L+G +L + A ++V + + GDI F
Sbjct: 312 DGLVKSIFIWHGLLSGVVGSLVGSILGSLVAVNLTSLVKGLETLIGHQFLSGDIYFVDFL 371
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
++ ++ AV + A+LL+ L A WYP R A + P
Sbjct: 372 PTELEIN---DVAVVAITAILLS-LLATWYPARRASALQP 407
>gi|46133408|ref|ZP_00203154.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Haemophilus influenzae
R2866]
Length = 416
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVSCFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAF----------DIRVGDILAAMFGGKQIRVSISI 470
G LIG+VL +I A + F + GD+ F ++ S
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWS--- 380
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + A L L A+ YP A K+ P + ++
Sbjct: 381 -DVLMVLIAALALSLIASLYPASRAAKLQPAQVLS 414
>gi|57240328|ref|ZP_00368277.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100]
gi|57018669|gb|EAL55442.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100]
Length = 643
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 77/142 (54%), Gaps = 14/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L I+ +A++S++V I +MN ++V+V +R+ EIG AIGA+K + F E+
Sbjct: 514 ATLTLLISSIAVVSLIVGGIGVMNIMLVSVSERTREIGVRMAIGARKEDILMQFLIEAVL 573
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ +G + G++L+ I V N+ + FG I +S+ S + + +L G
Sbjct: 574 ICSLGAIFGVMLSFIIIEVFNSLN----------FGFTMI---LSLNSVFLGLLSSVLIG 620
Query: 485 LAANWYPVRLALKISPLEAINR 506
+ ++P + A ++P+ A+++
Sbjct: 621 VVFGFFPAKNAANLNPISALSK 642
>gi|15896817|ref|NP_350166.1| Predicted permease [Clostridium acetobutylicum ATCC 824]
gi|15026679|gb|AAK81506.1|AE007854_13 Predicted permease [Clostridium acetobutylicum ATCC 824]
Length = 443
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 106/197 (53%), Gaps = 19/197 (9%)
Query: 313 DNEAWHHIVIKLKDSSKTQSV---IKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRI 369
+ + + + ++ KD SV I+ LN + +G A +N + + + +I
Sbjct: 258 NEKGYDKVTVEAKDMDSVSSVSHRIQKLNYSYIAQGDYANQIN---NVYLIF------KI 308
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
L I AI+ +V I ++NT+ +AV +++ IG M+A GA + ++++F +S + +G
Sbjct: 309 LLIAAGAIVLLVASIGVINTMTMAVHEKTKMIGIMKAQGASRRNIKRMFIVQSGSLGFLG 368
Query: 430 VLIGLVLALIAAAVVNAFDI--RVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAA 487
+ G ++ALI++ ++N + +VG I A M IR SI I + ++T+ +LAGL
Sbjct: 369 AMGGTIVALISSVIINKVLVAYKVGGIEAGM-KMVDIRASIIIFTILFTIIVSMLAGL-- 425
Query: 488 NWYPVRLALKISPLEAI 504
P A K++P++++
Sbjct: 426 --LPAGKAAKLNPVDSL 440
>gi|116754228|ref|YP_843346.1| protein of unknown function DUF214 [Methanosaeta thermophila PT]
gi|116665679|gb|ABK14706.1| protein of unknown function DUF214 [Methanosaeta thermophila PT]
Length = 389
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 369 ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
I +I + AI I NT+++ + +R+ EIG + A+GA + + KIF ES ++
Sbjct: 258 IFYILIFAIAG----FGIANTMIMIITRRTKEIGILMAMGATRLSIMKIFILESLILAPP 313
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
LIG +LA IAA ++ + + ++ + ++ ++ V + W + ++ L A
Sbjct: 314 SALIGCILAYIAARLIMMYPV---ELPSEIYMVSRMTVVMKPEFFFWAVIYSMIVNLVAG 370
Query: 489 WYPVRLALKISPLEAI 504
YP A ++ P+EAI
Sbjct: 371 LYPAYRASRLDPVEAI 386
>gi|150388208|ref|YP_001318257.1| protein of unknown function DUF214 [Alkaliphilus metalliredigens
QYMF]
gi|149948070|gb|ABR46598.1| protein of unknown function DUF214 [Alkaliphilus metalliredigens
QYMF]
Length = 449
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 376 AILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLV 435
A+ V I I NT+++++ +R+ EIG ++ +GA +RK+F E+ + +G ++GLV
Sbjct: 322 AVSLFVAAIGITNTMIMSIYERTREIGIIKVLGANLSDIRKLFLIEAAMIGLLGGIMGLV 381
Query: 436 LALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA---GLAANWYPV 492
L+ + +N ++ G +ISI ++AA+ A G+ + + P
Sbjct: 382 LSYTISFGLNKINV-------GFMGPGGGDTAISIIPIQLSLAAVAFATVIGIVSGYSPA 434
Query: 493 RLALKISPLEAI 504
R A+K+S LEAI
Sbjct: 435 RRAMKLSALEAI 446
>gi|134046118|ref|YP_001097604.1| protein of unknown function DUF214 [Methanococcus maripaludis C5]
gi|132663743|gb|ABO35389.1| protein of unknown function DUF214 [Methanococcus maripaludis C5]
Length = 414
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 9/135 (6%)
Query: 371 FITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
F++ +A +S+VV + I NT+ V++++ EIG M+AIGAK + +F S + VG
Sbjct: 285 FLSFIAGISLVVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVG 344
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
+GLVL I + ++ F I +M Q +SI S V + L AG+ A
Sbjct: 345 GFLGLVLGTIISQIIVWF------IAQSMDSSYQF--VLSIKSVVIAIGCSLAAGIIAGI 396
Query: 490 YPVRLALKISPLEAI 504
P A K+ P+EA+
Sbjct: 397 IPAYNASKLKPVEAL 411
>gi|88803889|ref|ZP_01119409.1| ABC transporter, permease protein, putative [Robiginitalea
biformata HTCC2501]
gi|88784768|gb|EAR15937.1| ABC transporter, permease protein, putative [Robiginitalea
biformata HTCC2501]
Length = 419
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 303 TELRDRLNLADNEAWHHIVIKLKDS--SKTQSVIKTLNDWFKEEGISARAVNWERGMAMY 360
T N ADN W I S S + ++ TL + K RA+ + Y
Sbjct: 216 TTFSQAFNRADNVGWMAITANDGTSITSLKEQIVNTLKEKHKVHPDDQRAIGYFDLYEQY 275
Query: 361 ---YSAIEGTRIL--FITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVR 415
S R + F+ +L +LS + I + N +++ V +R+ EIG RA+G + ++
Sbjct: 276 NRVESLFGAMRFIAYFVGILVLLSGI--IGVSNIMLIVVKERTKEIGIRRALGEQPWSIK 333
Query: 416 KIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVW 475
ES F++ + + G+ + + VN+ G + MF + S+S+G V
Sbjct: 334 LQILLESIFLTIISGMAGIAMGALFIYAVNSLLDANGPV--DMF----MNPSVSLGVVVG 387
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ ++ +GL A + P + A+++ P++A+
Sbjct: 388 ALLILMASGLLAGFIPAQSAIRVKPIDAL 416
>gi|78061574|ref|YP_371482.1| hypothetical protein Bcep18194_B0724 [Burkholderia sp. 383]
gi|122064317|sp|Q399M3|MACB_BURS3 Macrolide export ATP-binding/permease protein macB
gi|77969459|gb|ABB10838.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 687
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILS 379
I ++++D + + K+L + R + M +E T +L++++
Sbjct: 511 ITVRVRDGQPSAAAEKSLEKLMTQR--HGRKDFFTYNMDSVVKTVEKTGQSLTLLLSLIA 568
Query: 380 VVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLV 435
V+ L+V +MN ++V+V +R+ EIG A+GA++ + + F E+ + +G IG+
Sbjct: 569 VISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDILQQFLVEAVLVCLLGGTIGIA 628
Query: 436 LALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLA 495
L+ A+ + F Q ++ S G+ V L G+ + P R A
Sbjct: 629 LSFGLGALFSMF-------------VAQWKMVFSAGAIVTAFVCSTLTGVIFGFMPARNA 675
Query: 496 LKISPLEAINR 506
++ P++A+ R
Sbjct: 676 SRLDPIDALAR 686
>gi|153837340|ref|ZP_01990007.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AQ3810]
gi|149749371|gb|EDM60144.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AQ3810]
Length = 414
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W++ Y I+ R + ++ ++ V I++TL++AV R++EI +R +GAK
Sbjct: 253 SWQQQFGFLYRDIQLVRTIMYLVMVLVIGVACFNIVSTLMMAVKDRAAEIAILRTMGAKD 312
Query: 412 GFVRKIFFAESFFM----SCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFGG 461
+++IF + F S VG L+G+++AL ++ + + GDI F
Sbjct: 313 SLIQRIFVWQGVFSGVFGSLVGSLVGVLVALNLTPIIKWLEGLIGHQFLSGDIYFVDFLP 372
Query: 462 KQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
Q+ A+ + A++L+ L A WYP A K++P
Sbjct: 373 SQLHWP---DVALVSTTAIVLS-LLATWYPASRAAKLNP 407
>gi|152969469|ref|YP_001334578.1| macrolide transport protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954318|gb|ABR76348.1| macrolide transport protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 646
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 20/141 (14%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++++VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 521 LFLTLVAVIALVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 580
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAML---LAGL 485
G +G+ L+L+ A ++ F G +I S + + A L L G+
Sbjct: 581 GGALGVALSLMIAFILQLF-----------LPGWEIGF-----SPLALLTAFLCSTLTGV 624
Query: 486 AANWYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 625 LFGWLPARNAARLDPVDALAR 645
>gi|75210431|ref|ZP_00710587.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli B171]
gi|75257405|ref|ZP_00728921.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli E22]
Length = 648
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 28/145 (19%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V++R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVIERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA----- 483
G +G+ L+L+ A + F G +I S A+LLA
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEIGFS---------PLALLLAFLCST 622
Query: 484 --GLAANWYPVRLALKISPLEAINR 506
G+ W P R A ++ P++A+ R
Sbjct: 623 ATGILFGWLPARNAARLDPVDALAR 647
>gi|149007840|ref|ZP_01831436.1| hypothetical protein CGSSp18BS74_04681 [Streptococcus pneumoniae
SP18-BS74]
gi|149020776|ref|ZP_01835305.1| hypothetical protein CGSSp23BS72_02024 [Streptococcus pneumoniae
SP23-BS72]
gi|147760690|gb|EDK67663.1| hypothetical protein CGSSp18BS74_04681 [Streptococcus pneumoniae
SP18-BS74]
gi|147930417|gb|EDK81400.1| hypothetical protein CGSSp23BS72_02024 [Streptococcus pneumoniae
SP23-BS72]
Length = 316
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 78 IGKSVSASIVESAAETSKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 137
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 138 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 192
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 193 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIYEAIWIVGIALLLAFLV 252
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 253 AQGVGSLANA-------IVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKIS 305
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 306 KMDPVESL 313
>gi|145632938|ref|ZP_01788671.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 3655]
gi|144986594|gb|EDJ93160.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 3655]
Length = 416
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
++ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYKSDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILA-AMFGGKQIRVSISIGSAVW---- 475
G LIG+VL +I A + F + ++ + G V W
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWLDVL 383
Query: 476 -TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ A L L A+ YP A K+ P + ++
Sbjct: 384 MVLIAALALSLMASLYPASRAAKLQPAQVLS 414
>gi|134298197|ref|YP_001111693.1| protein of unknown function DUF214 [Desulfotomaculum reducens MI-1]
gi|134050897|gb|ABO48868.1| protein of unknown function DUF214 [Desulfotomaculum reducens MI-1]
Length = 395
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
Query: 384 IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAV 443
I IMN + V V +R+ EIGT++AIGAKK + F E+ +S G +IG+++ +A V
Sbjct: 287 IGIMNVMFVTVRERTREIGTLKAIGAKKQEILNQFLIEAVIISLAGGIIGVIMGFLALPV 346
Query: 444 VNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEA 503
+ F G+ + S++ ++ + ++ G+ +YP A +SPLEA
Sbjct: 347 LRYF-------------GQNVIASVN--GVLFGLVFSVVTGVFFGFYPAWKAADLSPLEA 391
Query: 504 I 504
+
Sbjct: 392 L 392
>gi|88801158|ref|ZP_01116702.1| ABC transporter, permease protein, putative [Reinekea sp. MED297]
gi|88776095|gb|EAR07326.1| ABC transporter, permease protein, putative [Reinekea sp. MED297]
Length = 407
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 43/275 (15%)
Query: 255 AAAIPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLN---- 310
+A I +V LS + DEL GAD +N ++GSTE + N
Sbjct: 148 SALIGAAVARQLSLEMGDELILISQGAD----GSMANDLYRVVGVVGSTEGAEARNVYLP 203
Query: 311 LADNEAW-------HHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSA 363
LA +++ H+ + D ++ + + LN W + AV W+ +Y
Sbjct: 204 LAAAQSFFVMPEQAHYWAVLTSDYERSDQLSQRLNSWLDGDS-ELEAVTWKVVSKEFYET 262
Query: 364 ----IEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFF 419
+EG + + I+ +V I ++NT++++V++R+ E G ++AIG G V +
Sbjct: 263 MKADVEGGYVAYY----IIIFLVCIGVLNTVLMSVLERTGEFGVLKAIGTSPGRVFTLIV 318
Query: 420 AESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGS---AVWT 476
E+ ++ + L GL++A+ +N + VG +L + + VS I S +W
Sbjct: 319 TETLMLAVLSCLAGLIVAM----PINYYLAAVGFVLP-----EPMEVSGVIMSHMKGLWD 369
Query: 477 MA-----AMLLAGLAA--NWYPVRLALKISPLEAI 504
+ A+++ G AA + +P R A KI P++A+
Sbjct: 370 VKTFMEPALIVIGSAALISLFPARRAAKIVPVDAM 404
>gi|50120755|ref|YP_049922.1| lipoprotein releasing system transmembrane protein [Erwinia
carotovora subsp. atroseptica SCRI1043]
gi|49611281|emb|CAG74728.1| lipoprotein releasing system transmembrane protein [Erwinia
carotovora subsp. atroseptica SCRI1043]
Length = 415
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 332 SVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTL 390
S K + D K + +W Y I+ R I+++ M+ ++ V ++ +TL
Sbjct: 234 SANKLVRDAGKATNLYVHIRSWIGTYGYMYRDIQMVRTIMYLAMILVIGVACFNIV-STL 292
Query: 391 VVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIA----AAVVNA 446
V+AV +SS+I +R +GA G +R IF +G +IG V+ +IA ++
Sbjct: 293 VMAVKDKSSDIAVLRTLGASDGLIRAIFIWYGLLAGLLGSVIGAVVGVIATLQLTPMIRG 352
Query: 447 FDIRVGDILAA--MFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ +G L + ++ + + + + L+ L A+WYP R A +I P +
Sbjct: 353 IEALIGHKLLSGDIYFIDFLPSELHLMDVFIVLGTSLVLSLIASWYPARRASRIDPARVL 412
Query: 505 N 505
+
Sbjct: 413 S 413
>gi|119713574|gb|ABL97625.1| putative ABC transport system permease protein [uncultured marine
bacterium EB0_39H12]
Length = 326
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 10/214 (4%)
Query: 282 DIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWF 341
D++ T NS S E + + + D L + + ++K+K+ + +S+ K +++ F
Sbjct: 113 DLVGTYTNSVSDEQNEAFI-NWKYFDEARLYETGRPGNYIVKIKNPDQAESIAKEIDELF 171
Query: 342 KEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEI 401
+ E M+ I ++ ++LA +L++ NT+ AV R+ E+
Sbjct: 172 MNSLDETKTSTEEAFSRMFAEQIGNIGLIINSVLAASFFTILLLTGNTMSQAVRDRTPEL 231
Query: 402 GTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGG 461
G ++A+G + AESFF+ G LIG+++A + + + +A F G
Sbjct: 232 GALKAVGFSDRLIMLFILAESFFLCVAGALIGVLIAYLLFPLFSG--------VAIGFSG 283
Query: 462 K-QIRVSISIGSAVWTMAAMLLAGLAANWYPVRL 494
+ + +SI I + + +++G+ + +RL
Sbjct: 284 EIEFSISIVISAILVAFVTAVISGVIPAYSAMRL 317
>gi|15611791|ref|NP_223442.1| hypothetical protein jhp0724 [Helicobacter pylori J99]
gi|4155280|gb|AAD06298.1| putative [Helicobacter pylori J99]
Length = 410
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 324 LKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIE-GTRILFITMLAILSVVV 382
+KD K ++ +KT+N GI W + ++SA+E R LFI ++ I+ +
Sbjct: 235 MKDIEKLRNALKTIN----HHGIGIEG--WWQQNGNFFSAMELEKRALFIVLMLIILMAS 288
Query: 383 LIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAA 442
L +I ++L++ VM R EI + ++G+ + ++K FF + GV++G+VLA I+
Sbjct: 289 LNII-SSLLMVVMNRRKEIALLFSMGSSQKEIQKTFFYLGNIIGLGGVILGVVLAFISMY 347
Query: 443 VVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLE 502
+++ F I + A ++G + + +S+ T+ ++ +++YP + A I L
Sbjct: 348 LLSVFPII--SLPADVYGINTLPLDLSLMDFTLTLIGSVIIVALSSYYPSKKASAIDALS 405
Query: 503 AI 504
+
Sbjct: 406 VL 407
>gi|88801157|ref|ZP_01116701.1| putative ABC transporter, permease protein [Reinekea sp. MED297]
gi|88776094|gb|EAR07325.1| putative ABC transporter, permease protein [Reinekea sp. MED297]
Length = 409
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 318 HHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAI 377
H I D S + ++L W + G A W M + I + + I
Sbjct: 220 HEIAFNFVDESLSSD--ESLALWSELSGPQTIAEGWTTLMPDLATMIGLMDYSMLIVATI 277
Query: 378 LSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLA 437
L VV ++ ++N + +++ +R+ E G + AIG ++ + + AE ++ + +++G +L
Sbjct: 278 LFVVAILGVINAMFMSIYERTYEFGVVLAIGTRRSSLFVLIMAEGLMLALISLVLGSILG 337
Query: 438 LIAAAVVNAFDIRVGDI-LAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
IA + A I G++ ++ + + +R I+IG ++ + + A+ YP A
Sbjct: 338 AIAVEITGAVGIDYGNMDISGVALAEVLRPEITIGQFTELPFSVFVMTMVASLYPALHAA 397
Query: 497 KISPLEAINR 506
+I P +A+++
Sbjct: 398 RIVPAQALHK 407
>gi|84060877|ref|YP_444080.1| EtsB [Escherichia coli]
gi|126215740|sp|P0C2H3|MACB2_ECOK1 Macrolide export ATP-binding/permease protein macB 2
gi|126215741|sp|P0C2H2|MACB2_ECOLI Macrolide export ATP-binding/permease protein macB
gi|76781969|gb|ABA54762.1| EtsB [Escherichia coli]
gi|88770331|gb|ABD51768.1| EtsB [Escherichia coli APEC O1]
Length = 646
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWF-KEEGISA-RAVNWERGMAMYYSAIEGTRILFITMLAI 377
I ++LKD+ ++ I ++ + GI + N+E+ +IE T + F ++ +
Sbjct: 469 ISVRLKDNVDNEAAISAISQLLTRRHGIKDFQLYNFEQ----IRKSIEHTSMTFSILILM 524
Query: 378 LSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
++ + L++ +MN ++++V +R+ EIG A+GA++ + + F E+ + +G +G
Sbjct: 525 VACISLMIGSIGVMNIMLISVTERTHEIGVRMAVGARRSDIMQQFIIEAVLVCLIGGALG 584
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+ L+ I A+ NA I AA++ S +AV L G+ + P R
Sbjct: 585 IALSYITGALFNAL---ADGIFAAIY---------SWQAAVAAFFCSTLIGIIFGYLPAR 632
Query: 494 LALKISPL 501
A ++ P+
Sbjct: 633 KAARMDPV 640
>gi|68249937|ref|YP_249049.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 86-028NP]
gi|68058136|gb|AAX88389.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 86-028NP]
Length = 416
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 18/271 (6%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYQPDQITGVELKLDDPFSARNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILA-AMFGGKQIRVSISIGSAVW---- 475
G LIG+VL +I A + F + ++ + G V W
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWLDVL 383
Query: 476 -TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ A L L A+ YP A K+ P + ++
Sbjct: 384 MVLVAALALSLMASLYPASRAAKLQPAQVLS 414
>gi|51245605|ref|YP_065489.1| hypothetical protein DP1753 [Desulfotalea psychrophila LSv54]
gi|50876642|emb|CAG36482.1| hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 211
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 375 LAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+ LS++V +V I+N +++V +R EIGT++ +GA FV ++F E+ VG + G
Sbjct: 84 IVFLSLLVCVVGIINAQIMSVTERFREIGTLKCLGALDSFVVRVFVLEAGIQGLVGSIFG 143
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
++ L+ A F R G + A F ++ +S I A+ T +++ A YP
Sbjct: 144 AIVGLLVATGTALF--RFGSPVQAAFFSIEVLISFIITLAIGTGLSLIGA-----LYPAI 196
Query: 494 LALKISPLEAINR 506
+A ++ P+EA+ R
Sbjct: 197 IAARMQPVEAMRR 209
>gi|91209915|ref|YP_539901.1| macrolide-specific ABC-type efflux carrier [Escherichia coli UTI89]
gi|117623058|ref|YP_851971.1| macrolide-specific ABC-type efflux carrier [Escherichia coli APEC
O1]
gi|122064322|sp|Q1RE44|MACB_ECOUT Macrolide export ATP-binding/permease protein macB
gi|145566777|sp|A1A9B7|MACB1_ECOK1 Macrolide export ATP-binding/permease protein macB 1
gi|91071489|gb|ABE06370.1| macrolide-specific ABC-type efflux carrier [Escherichia coli UTI89]
gi|115512182|gb|ABJ00257.1| macrolide-specific ABC-type efflux carrier [Escherichia coli APEC
O1]
Length = 648
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|145639090|ref|ZP_01794698.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae PittII]
gi|145272062|gb|EDK11971.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae PittII]
Length = 416
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 149 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 208
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 209 LAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 264
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 265 RDIQLIRTVMYIAMVLVIGVSCFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 323
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAF----------DIRVGDILAAMFGGKQIRVSISI 470
G LIG+VL +I A + F + GD+ F ++ S
Sbjct: 324 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWS--- 380
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + A L L A+ YP A K+ P + ++
Sbjct: 381 -DVLIVLIAALALSLIASLYPASRAAKLQPAQVLS 414
>gi|75240944|ref|ZP_00724833.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli F11]
gi|110641080|ref|YP_668810.1| macrolide-specific ABC-type efflux carrier [Escherichia coli 536]
gi|122064321|sp|Q0TJH0|MACB_ECOL5 Macrolide export ATP-binding/permease protein macB
gi|110342672|gb|ABG68909.1| macrolide-specific ABC-type efflux carrier [Escherichia coli 536]
Length = 648
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|122064315|sp|Q1BPZ6|MACB_BURCA Macrolide export ATP-binding/permease protein macB
Length = 681
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L ++++A++S+VV I +MN ++V+V +R+ EIG A+GA++ + + F E+ + +
Sbjct: 556 LLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDILQQFLVEAVLVCLL 615
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G IG+ L+ A+ + F Q ++ S G+ V L G+
Sbjct: 616 GGTIGIALSFGLGALFSVF-------------VAQWKMVFSAGAIVTAFVCSTLTGVIFG 662
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A ++ P++A+ R
Sbjct: 663 FMPARNASRLDPIDALAR 680
>gi|75195068|ref|ZP_00705138.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli HS]
gi|75511041|ref|ZP_00733782.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli 53638]
gi|83585823|ref|ZP_00924463.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli 101-1]
gi|124527137|ref|ZP_01698974.1| ABC transporter related [Escherichia coli B]
gi|124501482|gb|EAY48946.1| ABC transporter related [Escherichia coli B]
gi|157066082|gb|ABV05337.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli HS]
Length = 648
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|16128847|ref|NP_415400.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli K12]
gi|89107730|ref|AP_001510.1| fused macrolide transporter subunits and ATP-binding component and
membrane component of ABC superfamily [Escherichia coli
W3110]
gi|2829633|sp|P75831|MACB_ECOLI Macrolide export ATP-binding/permease protein macB
gi|1787105|gb|AAC73966.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli K12]
gi|4062463|dbj|BAA35598.1| fused macrolide transporter subunits and ATP-binding component and
membrane component of ABC superfamily [Escherichia coli
W3110]
gi|15487341|dbj|BAB64542.1| macrolide-specific ABC-type efflux carrier [Escherichia coli]
Length = 648
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|37525538|ref|NP_928882.1| Macrolide-specific ABC-type efflux carrier protein MacB
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|81834016|sp|Q7N6F9|MACB_PHOLL Macrolide export ATP-binding/permease protein macB
gi|36784966|emb|CAE13884.1| Macrolide-specific ABC-type efflux carrier protein MacB
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 647
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+TM+A++S++V I +MN ++V+V +R+ EIG A+GA+ VR+ F E+ + V
Sbjct: 522 LFLTMVAVISLIVGGIGVMNIMLVSVTERTREIGIRMAVGARTSDVRQQFLIEAILVCLV 581
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G ++G+ L+ A + A+ G + I++ SA A+ G+
Sbjct: 582 GGVLGIGLSYTIAFIAQ----------LALPGWHFVFQPIALLSAFACSTAI---GVIFG 628
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A ++ P+EA+ R
Sbjct: 629 FLPARNAARLDPIEALAR 646
>gi|149175018|ref|ZP_01853641.1| Predicted permease [Planctomyces maris DSM 8797]
gi|148845996|gb|EDL60336.1| Predicted permease [Planctomyces maris DSM 8797]
Length = 523
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 17/144 (11%)
Query: 370 LFITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L ++++AI ++++ V I NT+V++V++R+ EIG M+A+GA++G ++ +F E
Sbjct: 385 LIVSLVAIFALIISAVGIANTMVMSVVERTREIGIMKALGAREGQIQMLFLIE------- 437
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSIS----IGSAVWTMAAML--- 481
G LIGL+ L A A+ A I + ++ KQ+ + I +W +A +L
Sbjct: 438 GALIGLIGGLCAMAIGLAIKIPIESYTISLL-EKQLNKTFEQQHVIEFPLWLLALVLAFS 496
Query: 482 -LAGLAANWYPVRLALKISPLEAI 504
+ A P R A +I P+ A+
Sbjct: 497 MIVTTLATILPARRAARIDPITAL 520
>gi|75229240|ref|ZP_00715805.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli B7A]
Length = 648
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|148992151|ref|ZP_01821925.1| hypothetical protein CGSSp9BS68_11710 [Streptococcus pneumoniae
SP9-BS68]
gi|147929200|gb|EDK80211.1| hypothetical protein CGSSp9BS68_11710 [Streptococcus pneumoniae
SP9-BS68]
Length = 318
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 80 IGKSVSASIVESAAETSKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 139
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 140 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 194
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 195 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIYEAIWIVGIALLLAFLV 254
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 255 AQGVGSLANA-------IVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKIS 307
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 308 KMDPIESL 315
>gi|116514891|ref|YP_813797.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116094206|gb|ABJ59359.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 665
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Query: 354 ERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGF 413
E+ M+ S + + ++ A+ +V I+I+ L ++V++R+ EIG M+A+GA++
Sbjct: 521 EQMTEMFDSILSVLTYVLTSIAAVSLLVSAIMILVVLNISVVERTQEIGVMKALGARRKD 580
Query: 414 VRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSA 473
+R+IF +E+F + ++G+ L + A +N+F + F K VS++ A
Sbjct: 581 IRRIFSSEAFLLGLASGIVGIALTWLLAQGINSFT-------KSAF--KADVVSLTPQYA 631
Query: 474 VWTMAAMLLAGLAANWYPVRLALKISPLEAINR 506
+ + ++ + A P A K+ P+EA+ +
Sbjct: 632 LTGLLISIVISMIAGILPANHASKLDPVEALRK 664
>gi|78485516|ref|YP_391441.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Thiomicrospira crunogena XCL-2]
gi|78363802|gb|ABB41767.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Thiomicrospira crunogena XCL-2]
Length = 416
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W + + ++ AIE + + +L ++ +V I++T+V+ V + +I +R IGA
Sbjct: 255 DWTQQHSNFFKAIEMEKRMMFIVLTLIIMVAAFNIVSTMVMVVTDKQKDIAVLRTIGATP 314
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
G V+ IF + + G ++G++ + + ++ + + F I I
Sbjct: 315 GSVQTIFIVQGLIIGTFGAILGVIGGVAISLNIDVIVPFIESVFGFKFFPADIYYISKIP 374
Query: 472 S-----AVWTMAAM-LLAGLAANWYPVRLALKISPLEAI 504
S VWT++ + + L A YP R A K+ P EA+
Sbjct: 375 SDLHWEDVWTVSGLAFVLTLLATIYPARRASKVQPAEAL 413
>gi|114772738|ref|ZP_01450080.1| ABC-type transport systems, involved in lipoprotein release,
permease components [alpha proteobacterium HTCC2255]
Length = 419
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 18/143 (12%)
Query: 367 TRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAES 422
T+ +F ++A ++ + L+V IMN ++ VM+R++EIG +RA+GA + +R F AES
Sbjct: 289 TQQIFNIVMACVAGISLLVGGIGIMNIMLANVMERTTEIGLLRAVGATQQDIRLQFLAES 348
Query: 423 FFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLL 482
F +S +G ++G+V L + ++ + VS S+ + + +++ LL
Sbjct: 349 FTISVLGGILGIVFGLALSEIIGFY--------------SDWAVSWSLTAILLSLSICLL 394
Query: 483 AGLAANWYPVRLALKISPLEAIN 505
G+ +P A K++P+EA++
Sbjct: 395 VGVGFGVFPAIKASKLNPIEALH 417
>gi|15901836|ref|NP_346440.1| hypothetical protein SP_2013 [Streptococcus pneumoniae TIGR4]
gi|14973523|gb|AAK76080.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
Length = 326
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 88 IGKSVSASIVESAAETSKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 147
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 148 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 202
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 203 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIYEAIWIVGIALLLAFLV 262
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 263 AQGVGSLANA-------IVSHFYPSITKVFKLNLLSVLGTLVFALLLGYVSAYFPARKIS 315
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 316 KMDPIESL 323
>gi|111657103|ref|ZP_01407892.1| hypothetical protein SpneT_02001676 [Streptococcus pneumoniae
TIGR4]
Length = 338
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 100 IGKSVSASIVESAAETSKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 159
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 160 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 214
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 215 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRDVKGIFIYEAIWIVGIALLLAFLV 274
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 275 AQGVGSLANA-------IVSHFYPSITKVFKLNLLSVLGTLVFALLLGYVSAYFPARKIS 327
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 328 KMDPIESL 335
>gi|15830219|ref|NP_308992.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. Sakai]
gi|13360424|dbj|BAB34388.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. Sakai]
Length = 648
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFMTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|15800637|ref|NP_286651.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 EDL933]
gi|81860835|sp|Q8XED0|MACB_ECO57 Macrolide export ATP-binding/permease protein macB
gi|12513909|gb|AAG55261.1|AE005269_5 putative ATP-binding component of a transport system [Escherichia
coli O157:H7 EDL933]
Length = 648
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFMTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 629
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 630 WLPARNAARLDPVDALAR 647
>gi|45358434|ref|NP_987991.1| hypothetical protein MMP0871 [Methanococcus maripaludis S2]
gi|44921192|emb|CAF30427.1| conserved hypothetical membrane protein [Methanococcus maripaludis
S2]
Length = 397
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 118/235 (50%), Gaps = 11/235 (4%)
Query: 272 DELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLADNEAWHHIVIKLKDSSKTQ 331
D++ +D +I ++ + + +++ S ++ + L +NE ++ +++ ++
Sbjct: 169 DKITINDKKYKVIGILEETGNPRTENSVILSKDVGEELFEINNE-YNMMIVSVRSGEDVN 227
Query: 332 SVIKTLNDWFKE-EGISARAVNWERGMAMYYSAIEGTRILFITMLAILSVVVLIV-IMNT 389
V + + D ++ G +V +A ++I +F+ +A +S++V V I NT
Sbjct: 228 LVSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNT 287
Query: 390 LVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDI 449
+ +++++R +IG ++A+GA+ + IF E+ F+ G ++G +L ++ A +
Sbjct: 288 MHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGILIAKAI----- 342
Query: 450 RVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ +AA+ G IR IS V + + G+ + ++P R K++P++ +
Sbjct: 343 ---EYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTL 394
>gi|145589649|ref|YP_001156246.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Polynucleobacter sp. QLW-P1DMWA-1]
gi|145048055|gb|ABP34682.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Polynucleobacter sp. QLW-P1DMWA-1]
Length = 420
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W R +++A++ + + +L ++ V +++TLV+ V ++ ++I +R +GA
Sbjct: 259 DWSRSNRNWFAAVQTEKKMMFIILTLIIAVAAFNLVSTLVMTVNEKQADIAILRTMGASP 318
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
G +++IF + + +G L G+ L L+ A ++ + I F + + +
Sbjct: 319 GLIQRIFLVQGLAIGLLGSLAGVGLGLLIALNIDVIVPTIEAIFRVRFLPRDVYFISELP 378
Query: 472 SAVW----TMAAMLLAGLA--ANWYPVRLALKISPLEAI 504
S V ++ GL+ A YP R A K+ P EA+
Sbjct: 379 SDVRLNDVVTVGLMAFGLSVLATLYPSRRAAKVQPAEAL 417
>gi|149003847|ref|ZP_01828675.1| hypothetical protein CGSSp14BS69_03268 [Streptococcus pneumoniae
SP14-BS69]
gi|147758181|gb|EDK65184.1| hypothetical protein CGSSp14BS69_03268 [Streptococcus pneumoniae
SP14-BS69]
Length = 277
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 39 IGKSVSASIVESAAETSKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 98
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 99 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 153
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 154 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIYEAIWIVGIALLLAFLV 213
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 214 AQGVGSLANA-------IVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKIS 266
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 267 KMDPVESL 274
>gi|116693048|ref|YP_838581.1| ABC transporter related [Burkholderia cenocepacia HI2424]
gi|123467361|sp|A0B212|MACB_BURCH Macrolide export ATP-binding/permease protein macB
gi|116651048|gb|ABK11688.1| ABC transporter related [Burkholderia cenocepacia HI2424]
Length = 681
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L ++++A++S+VV I +MN ++V+V +R+ EIG A+GA++ + + F E+ + +
Sbjct: 556 LLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDILQQFLVEAVLVCLL 615
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G IG+ L+ A+ + F Q ++ S G+ V L G+
Sbjct: 616 GGTIGIALSFGLGALFSVF-------------VAQWKMVFSAGAIVTAFVCSTLTGVIFG 662
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A ++ P++A+ R
Sbjct: 663 FMPARNASRLDPIDALAR 680
>gi|34557623|ref|NP_907438.1| hypothetical protein WS1259 [Wolinella succinogenes DSM 1740]
gi|34483340|emb|CAE10338.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 403
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 346 ISARAVNWERGMAMYYSAIE-GTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTM 404
+ A V W + +++A++ R LFI ++ I+ + L +I ++L++ VM R EI +
Sbjct: 244 LEAGIVGWWQQNGNFFAALQLEKRALFIVLMLIILIASLNII-SSLLMTVMNRRREIALL 302
Query: 405 RAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQI 464
+GA + +++ FF + G+ +G++LA IA V++ F I + A ++G ++
Sbjct: 303 LTLGATQSEIKRTFFRLGNTIGLSGIALGVLLAGIALWVLSTFPII--SLPADVYGSSKL 360
Query: 465 RVSISIGSAVWTMAAMLLAG-----LAANWYPVRLALKISPLEAI 504
+ +S W M+L G L +++YP A KI PL +
Sbjct: 361 PLELS-----WIDFGMILLGSTLIVLLSSYYPAYQATKIDPLSVL 400
>gi|118714404|ref|ZP_01566959.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
gi|118648123|gb|EAV54933.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
Length = 681
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L ++++A++S+VV I +MN ++V+V +R+ EIG A+GA++ + + F E+ + +
Sbjct: 556 LLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDILQQFLVEAVLVCLL 615
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G IG+ L+ A+ + F Q ++ S G+ V L G+
Sbjct: 616 GGTIGIALSFGLGALFSVF-------------VAQWKMVFSAGAIVTAFVCSTLTGVIFG 662
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A ++ P++A+ R
Sbjct: 663 FMPARNASRLDPIDALAR 680
>gi|84352619|ref|ZP_00977572.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Burkholderia cenocepacia PC184]
gi|124876612|gb|EAY66602.1| ABC-type antimicrobial peptide transport system, permease component
[Burkholderia cenocepacia PC184]
Length = 684
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L ++++A++S+VV I +MN ++V+V +R+ EIG A+GA++ + + F E+ + +
Sbjct: 559 LLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDILQQFLVEAVLVCLL 618
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G IG+ L+ A+ + F Q ++ S G+ V L G+
Sbjct: 619 GGTIGIALSFGLGALFSVF-------------VAQWKMVFSAGAIVTAFVCSTLTGVIFG 665
Query: 489 WYPVRLALKISPLEAINR 506
+ P R A ++ P++A+ R
Sbjct: 666 FMPARNASRLDPIDALAR 683
>gi|145631789|ref|ZP_01787549.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 22.4-21]
gi|144982579|gb|EDJ90129.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae R3021]
Length = 371
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 18/271 (6%)
Query: 248 MTMGARVA----AAIPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGS 302
+ +GA +A + D + L +S+++ DE FA + + + + + ++DY L
Sbjct: 104 LVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLP 163
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYY 361
+ + +KL D +++ + LND+ + + NW Y
Sbjct: 164 LAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLSMLNDYPQMLYMQ----NWISKFGYMY 219
Query: 362 SAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFA 420
I+ R +++I M+ ++ V ++ +TL++AV + +I MR +GA F+++IF
Sbjct: 220 RDIQLIRTVMYIAMVLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIW 278
Query: 421 ESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILA-AMFGGKQIRVSISIGSAVW---- 475
G LIG+VL +I A + F + ++ + G V W
Sbjct: 279 YGLQAGMKGCLIGIVLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWLDVL 338
Query: 476 -TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ A L L A+ YP A K+ P + ++
Sbjct: 339 MVLIAALALSLMASLYPASRAAKLQPAQVLS 369
>gi|15903868|ref|NP_359418.1| hypothetical protein spr1826 [Streptococcus pneumoniae R6]
gi|15459514|gb|AAL00629.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 326
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 88 IGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 147
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 148 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 202
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 203 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIYEAIWIVGIALLLAFLV 262
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 263 AQGVGSLANA-------IVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKIS 315
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 316 KMDPVESL 323
>gi|68549504|ref|ZP_00588967.1| Protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
gi|68243592|gb|EAN25790.1| Protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 411
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 18/140 (12%)
Query: 366 GTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM 425
GT I+ +A+L+ V IMN ++V+V +R+ EIG +++GA + + + F ESFF+
Sbjct: 286 GTGAFIISFMALLTAGV--GIMNIMLVSVTERTREIGIRKSVGAPRRTILRQFLLESFFL 343
Query: 426 SCVGVLIGLVLALIAA-AVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
S G +IG++ +IA AV F+ L +F I VS+ + S + G
Sbjct: 344 SLAGGVIGVLAGIIAGNAVAWKFN------LPPIFPWVWITVSMLVCSGI---------G 388
Query: 485 LAANWYPVRLALKISPLEAI 504
+A +P A ++P+EA+
Sbjct: 389 MAFGLFPAWKAANLNPVEAL 408
>gi|56460624|ref|YP_155905.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina loihiensis L2TR]
gi|56179634|gb|AAV82356.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina loihiensis L2TR]
Length = 409
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 352 NWERGMAMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
+W + + A+ + + MLA++ V ++ L++ + + +I ++ +G
Sbjct: 255 DWRQNYGQLFEAVGMEKRMMWLMLALIIAVAAFNTLSALIMVINDKRHDIAILQTLGLSN 314
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQ--IRVSIS 469
G +R +F + + +G LIG++L LI + +N G A +F G + + I+
Sbjct: 315 GRIRTVFLLQGLYNGVLGSLIGVILGLILSWYLNDILALFG---AQIFAGSDEGLPIIIN 371
Query: 470 IGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ + T+ A + L A YP A + P EA+
Sbjct: 372 VSQVIITVVAAITLTLVATLYPASQAAHVQPSEAL 406
>gi|116619830|ref|YP_821986.1| protein of unknown function DUF214 [Solibacter usitatus Ellin6076]
gi|116222992|gb|ABJ81701.1| protein of unknown function DUF214 [Solibacter usitatus Ellin6076]
Length = 809
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 22/139 (15%)
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
L + + SV+ L+ I L ++V R EI A+GA++ +RK+ FAE F + G
Sbjct: 686 LLVGFALVGSVLTLVGIYGVLSLSVAARRREIAIRAAVGAERSDIRKLVFAEGFRLIAGG 745
Query: 430 VLIGLVLALIAAAVVNAF--DIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLA- 486
VL G++ AL+ + V+ +F ++ D + I +G +L G+A
Sbjct: 746 VLSGMLAALVLSRVLKSFLYEVEATDPVTL----------IGVG--------LLFTGVAL 787
Query: 487 -ANWYPVRLALKISPLEAI 504
A W P R A K+ P+EA+
Sbjct: 788 LACWEPTRRAAKVDPIEAL 806
>gi|24372410|ref|NP_716452.1| ABC transporter, ATP-binding/permease protein [Shewanella
oneidensis MR-1]
gi|81845905|sp|Q8EIL8|MACB_SHEON Macrolide export ATP-binding/permease protein macB
gi|24346376|gb|AAN53897.1|AE015526_8 ABC transporter, ATP-binding/permease protein [Shewanella
oneidensis MR-1]
Length = 656
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 366 GTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFF 424
T L I+ +A++S+VV I +MN ++V+V +R+ EIG A+GA++ + + F E+
Sbjct: 527 ATMTLLISAIAVISLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQSDILRQFLIEAVL 586
Query: 425 MSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAG 484
+ G +G+ LA + +G + A G Q+ S + S V A L G
Sbjct: 587 VCLCGGALGVALAYL-----------IGVVFAQAGGSFQMIYSTT--SIVAAFACSTLIG 633
Query: 485 LAANWYPVRLALKISPLEAINR 506
+ + P R A ++ P+EA+ R
Sbjct: 634 VLFGFLPARNAARLDPVEALAR 655
>gi|153874278|ref|ZP_02002559.1| protein of unknown function DUF214 [Beggiatoa sp. PS]
gi|152069258|gb|EDN67441.1| protein of unknown function DUF214 [Beggiatoa sp. PS]
Length = 288
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILS 379
+++ L+++S+T I + F + + W Y+S + +F + +I+
Sbjct: 106 LIVVLRETSQTDISIAQIRTQFPNLTV----IPWYEKATFYHSVVNLYWTIFGFLGSIII 161
Query: 380 VVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALI 439
+VV++ NTL++ VM+R E+GT+ A+G + V F E + G +IG++ L+
Sbjct: 162 IVVILTSFNTLMMTVMERIPEVGTLMAVGIPRVKVMWAFLLEGGLIGFFGAIIGIIATLV 221
Query: 440 AAAVVNAFDIRVGDILAAMFG 460
A +VN I + FG
Sbjct: 222 VAVIVNLIQIPMPPPPGGTFG 242
>gi|119896902|ref|YP_932115.1| ATP-binding/permease fusion ABC transporter [Azoarcus sp. BH72]
gi|134048477|sp|A1K323|MACB_AZOSB Macrolide export ATP-binding/permease protein macB
gi|119669315|emb|CAL93228.1| ATP-binding/permease fusion ABC transporter [Azoarcus sp. BH72]
Length = 656
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 355 RGMAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAK 410
R MA + T+ +L ++ + L+V +MN ++V+V +R+ EIG A GA+
Sbjct: 515 RNMASVIDTVSATQNTLTILLGTVAAISLLVGGIGVMNIMLVSVTERTREIGIRMATGAR 574
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI 470
+ + F E+ +S +G LIG+ + L AAV+ FD + L + V ++
Sbjct: 575 MKNILQQFLIEALVVSALGGLIGVAVGLGTAAVIALFDTPIKYSL--------LPVVLAF 626
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
G A T GL + P R A ++ P+ A+
Sbjct: 627 GCAFAT-------GLVFGYLPARKAARLDPVVAL 653
>gi|45358084|ref|NP_987641.1| ABC transporter, permease protein [Methanococcus maripaludis S2]
gi|44920841|emb|CAF30077.1| ABC transporter, permease protein [Methanococcus maripaludis S2]
Length = 415
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 9/135 (6%)
Query: 371 FITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
F++ +A +S++V + I NT+ V++++ EIG M+AIGAK + +F S + VG
Sbjct: 286 FLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVG 345
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
+GLVL I + ++ F I +M Q +SI S V + L AG+ A
Sbjct: 346 GFLGLVLGTILSQIIVWF------IAQSMDSSYQF--VLSIKSVVIAIGCSLAAGIIAGI 397
Query: 490 YPVRLALKISPLEAI 504
P A K+ P+EA+
Sbjct: 398 IPAYNASKLKPVEAL 412
>gi|109672408|ref|ZP_01374646.1| ABC transporter, ATP-binding protein [Campylobacter concisus 13826]
gi|112801313|gb|EAT98657.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
concisus 13826]
Length = 642
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 367 TRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM 425
T L I+ +A++S+VV I +MN ++V+V +R+ EIG AIGA++ + + F E+ +
Sbjct: 514 TMRLLISSIAVVSLVVGGIGVMNIMLVSVTERTKEIGIKMAIGARQSNILQQFLIEAVLL 573
Query: 426 SCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGL 485
+G IG++L+ + N F + G I S GS V + + G+
Sbjct: 574 CLIGGAIGIILSYAIGYIFNNF----------LNGFSMI---FSNGSIVLALVTSMAIGI 620
Query: 486 AANWYPVRLALKISPLEAINR 506
+ P + A K++P++A++R
Sbjct: 621 IFGYMPAKNASKLNPIDALSR 641
>gi|16273448|ref|NP_439697.1| hypothetical protein HI1548 [Haemophilus influenzae Rd KW20]
gi|1175890|sp|P44250|LOLE_HAEIN Lipoprotein-releasing system transmembrane protein lolC
gi|1574393|gb|AAC23198.1| conserved hypothetical transmembrane protein [Haemophilus
influenzae Rd KW20]
Length = 416
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADI-IDTVQNSNSKIDYENLLGSTELRDRLNLADNEA 316
+ D + L +S+++ DE FA + + + ++ + ++DY L +
Sbjct: 163 VGDWITLLISQQNGDEQFAQPTREPVQVTSILRLDGQLDYSYALLPLAQAQTFLTYQPDQ 222
Query: 317 WHHIVIKLKDSSKTQSV-IKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTR-ILFITM 374
+ +KL D +++ + LND+ + + NW Y I+ R +++I M
Sbjct: 223 ITGVELKLDDPFSARNLDLSMLNDYPQMLYMQ----NWISKFGYMYRDIQLIRTVMYIAM 278
Query: 375 LAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGL 434
+ ++ V ++ +TL++AV + +I MR +GA F+++IF G LIG+
Sbjct: 279 VLVIGVACFNIV-STLIMAVKDKQGDIAIMRTLGANNAFIKRIFIWYGLQAGMKGCLIGI 337
Query: 435 VLALIAAAVVNAFDIRVGDILA-AMFGGKQIRVSISIGSAVW-----TMAAMLLAGLAAN 488
VL +I A + F + ++ + G V W + A L L A+
Sbjct: 338 VLGIILALNLTTFIQGIEWVIGKKLLSGDVYFVDFLPSELHWLDVLMVLVAALALSLMAS 397
Query: 489 WYPVRLALKISPLEAIN 505
YP A K+ P + ++
Sbjct: 398 LYPASRAAKLQPAQVLS 414
>gi|24112255|ref|NP_706765.1| putative ATP-binding component of a transport system [Shigella
flexneri 2a str. 301]
gi|30062367|ref|NP_836538.1| putative ATP-binding component of a transport system [Shigella
flexneri 2a str. 2457T]
gi|81839292|sp|Q83LR7|MACB_SHIFL Macrolide export ATP-binding/permease protein macB
gi|24051105|gb|AAN42472.1| putative ATP-binding component of a transport system [Shigella
flexneri 2a str. 301]
gi|30040612|gb|AAP16344.1| putative ATP-binding component of a transport system [Shigella
flexneri 2a str. 2457T]
Length = 648
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA----- 483
G +G+ L+L+ A + F G +I S A+LLA
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEIGFS---------PLALLLAFLCST 622
Query: 484 --GLAANWYPVRLALKISPLEAINR 506
G+ W P R A ++ P++A+ R
Sbjct: 623 ATGILFGWLPARNAARLDPVDALAR 647
>gi|74311424|ref|YP_309843.1| putative ATP-binding component of a transport system [Shigella
sonnei Ss046]
gi|122064335|sp|Q3Z3Q4|MACB_SHISS Macrolide export ATP-binding/permease protein macB
gi|73854901|gb|AAZ87608.1| putative ATP-binding component of a transport system [Shigella
sonnei Ss046]
Length = 648
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA----- 483
G +G+ L+L+ A + F G +I S A+LLA
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEIGFS---------PLALLLAFLCST 622
Query: 484 --GLAANWYPVRLALKISPLEAINR 506
G+ W P R A ++ P++A+ R
Sbjct: 623 ATGILFGWLPARNAARLDPVDALAR 647
>gi|116515615|ref|YP_817232.1| hypothetical protein SPD_1824 [Streptococcus pneumoniae D39]
gi|116076191|gb|ABJ53911.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 320
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 258 IPDSVDLSLSEKSEDELFADDSGADIIDTVQNSNSKIDYENLLGSTELRDRLNLAD-NEA 316
I SV S+ E + + I+ + + + D + + S ++ L A +A
Sbjct: 82 IGKSVSASIVESAAEASKIAQFQTKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKA 141
Query: 317 WHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLA 376
+ +++LKD S+T+ V + L ++ ++ +R + + + I + L I + +
Sbjct: 142 VSYFILELKDPSQTKVVTEEL-----QKNKKYTVLSQQRVLDIVITFIRVIQGLLIVLSS 196
Query: 377 ILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
VV ++I + + +MQRS EIG M+A+G + V+ IF E+ ++ + +L+ ++
Sbjct: 197 QAIVVAAVMIGIIIYINIMQRSKEIGVMKAVGYQNRGVKGIFIYEAIWIVGIALLLAFLV 256
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
A ++ NA I++ + +++ S + T+ LL G + ++P R
Sbjct: 257 AQGVGSLANA-------IVSHFYPSITKVFELNLLSVLGTLVFALLLGYVSAYFPARKIS 309
Query: 497 KISPLEAI 504
K+ P+E++
Sbjct: 310 KMDPVESL 317
>gi|51596762|ref|YP_070953.1| ABC tranporter/lipoprotein releasing system, permease subunit lolE
[Yersinia pseudotuberculosis IP 32953]
gi|51590044|emb|CAH21678.1| ABC tranporter/lipoprotein releasing system, permease subunit lolE
[Yersinia pseudotuberculosis IP 32953]
Length = 415
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 254 SWIGTYGYMYRDIQMIRTIMYLAMVLVIGVASFNIV-STLVMAVKDKSSDIAVLRTLGAK 312
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI 470
G +R IF +G + G V+ +I + + + ++ F I +
Sbjct: 313 DGLIRAIFIWYGLLAGLIGSISGAVIGVIVSLQLTTIIRGLEKMVGHQFLSSDIYFIDFL 372
Query: 471 GSAV-W-----TMAAMLLAGLAANWYPVRLALKISPLEAIN 505
S + W +A L+ L A+WYP R A +I P ++
Sbjct: 373 PSELHWFDVACVLATALVLSLIASWYPARRASRIDPARVLS 413
>gi|75178316|ref|ZP_00698370.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Shigella boydii BS512]
Length = 648
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA----- 483
G +G+ L+L+ A + F G +I S A+LLA
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEIGFS---------PLALLLAFLCST 622
Query: 484 --GLAANWYPVRLALKISPLEAINR 506
G+ W P R A ++ P++A+ R
Sbjct: 623 ATGILFGWLPARNAARLDPVDALAR 647
>gi|75214596|ref|ZP_00713136.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli E110019]
Length = 648
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLA----- 483
G +G+ L+L+ A + F G +I S A+LLA
Sbjct: 583 GGALGITLSLLIAFTLQLF-----------LPGWEIGFS---------PLALLLAFLCST 622
Query: 484 --GLAANWYPVRLALKISPLEAINR 506
G+ W P R A ++ P++A+ R
Sbjct: 623 ATGILFGWLPARNAARLDPVDALAR 647
>gi|32265817|ref|NP_859849.1| hypothetical protein HH0318 [Helicobacter hepaticus ATCC 51449]
gi|32261866|gb|AAP76915.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 417
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 353 WERGMAMYYSAIE-GTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
W + ++SA+E R LFI ++ I+ V+ + I+++L++ VM R EI + ++GA +
Sbjct: 265 WWQQNGNFFSALELEKRALFIVLMLII-VMAALNIISSLLMVVMNRRKEIALLLSLGASR 323
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIG 471
++ IFF + G+ +G++L IA V++ F I + A ++G ++ + +S+
Sbjct: 324 QEIKSIFFWVGNTIGLSGIALGIILTGIAMYVLDTFPII--SLPADVYGSSKLPLDLSLI 381
Query: 472 SAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ T+ + +++YP R A + L+ +
Sbjct: 382 DFLLTIIGAIFIVCLSSYYPARKASLVDTLQVL 414
>gi|75189920|ref|ZP_00703187.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Escherichia coli E24377A]
Length = 465
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 340 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 399
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAAN 488
G +G+ L+L+ A + F G +I S + + + G+
Sbjct: 400 GGALGITLSLLIAFTLQLF-----------LPGWEI--GFSPLALLLAFLCSTVTGILFG 446
Query: 489 WYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 447 WLPARNAARLDPVDALAR 464
>gi|54298922|ref|YP_125291.1| hypothetical protein lpp2989 [Legionella pneumophila str. Paris]
gi|53752707|emb|CAH14142.1| hypothetical protein [Legionella pneumophila str. Paris]
Length = 397
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 321 VIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSV 380
V+ LK S VI + + + + + + R +++E +F +LA++
Sbjct: 223 VLLLKPDSPIDEVINEIKEIINSQ--APKLSVFPRSAKQIIASMENQGRIFTLLLAVIGG 280
Query: 381 VVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
+ L+V +MN ++V+V +R EIG +A+GAK ++ +F ES +S +G ++G++L
Sbjct: 281 ISLLVGGIGVMNVMLVSVSERKKEIGIRKAVGAKNREIQALFLVESVMLSLLGGVLGVIL 340
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
LI +V A F V + A + ++A G+ +YP R A
Sbjct: 341 GLIFTRIV------------AYFSDWTFTVYLLPPIAGFLVSAA--TGIFFGFYPARRAS 386
Query: 497 KISPLEAI 504
K+ P+ ++
Sbjct: 387 KLEPMVSL 394
>gi|146311289|ref|YP_001176363.1| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter sp. 638]
gi|145318165|gb|ABP60312.1| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter sp. 638]
Length = 414
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W Y I+ R I+++ M+ ++ V ++ +TLV+AV +SS+I +R +GAK
Sbjct: 253 SWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIV-STLVMAVKDKSSDIAVLRTLGAK 311
Query: 411 KGFVRKIF----FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRV------GDILAAMFG 460
G +R IF F S GV+IG+V++L ++N + + GDI F
Sbjct: 312 DGLIRAIFVWYGLLAGLFGSLCGVVIGVVVSLQLTPIINGIEKLIGHQFLSGDIYFIDF- 370
Query: 461 GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ + ++ + LL L A+WYP R A +I P ++
Sbjct: 371 ---LPSELHWLDVIYVLVTALLLSLLASWYPARRASRIDPARVLS 412
>gi|88860906|ref|ZP_01135542.1| hypothetical protein PTD2_10168 [Pseudoalteromonas tunicata D2]
gi|88817119|gb|EAR26938.1| hypothetical protein PTD2_10168 [Pseudoalteromonas tunicata D2]
Length = 411
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 18/142 (12%)
Query: 367 TRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAES 422
T+ +F +++ ++ + L+V IMN ++ V++R+ EIG +RAIGA + +R F AES
Sbjct: 281 TQQIFNIVMSCVAGISLLVGGIGIMNIMLATVLERTKEIGLLRAIGATEKDIRIQFIAES 340
Query: 423 FFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLL 482
F +S +G L+G+V ++ + ++ + A M+ I +S SI +A+
Sbjct: 341 FTISILGGLLGVVFGILLSELIAIY-----SQWAVMWSISAILLSFSICAAI-------- 387
Query: 483 AGLAANWYPVRLALKISPLEAI 504
GL YP A ++ P+ A+
Sbjct: 388 -GLIFGVYPAIKASQLDPITAL 408
>gi|121542731|ref|ZP_01674448.1| lipoprotein releasing system, permease component [Candidatus
Desulfococcus oleovorans Hxd3]
gi|121517367|gb|EAX54258.1| lipoprotein releasing system, permease component [Candidatus
Desulfococcus oleovorans Hxd3]
Length = 408
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 320 IVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILS 379
I I++KD + +V + L G A +W +SA++ + + +L ++
Sbjct: 226 IEIRVKDIYRADTVGEQL---VARLGYPYYARDWMSMNRNLFSALKLEKTVMFIILTLII 282
Query: 380 VVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALI 439
+V I ++L++ VM + EIG ++A+GA + +++IF E + G L+GL ++
Sbjct: 283 LVAAFNIASSLIMIVMNKKREIGILKAMGATRKSIKRIFVIEGMIIGGAGTLLGLFFGVL 342
Query: 440 AAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKIS 499
A ++ + D+ ++ + V + + + A L A YP A K+
Sbjct: 343 ACLLLQRYQFI--DLPDDVYYITTLPVQLELTDGLIIALAALAICYLATLYPANQASKVD 400
Query: 500 PLEAI 504
P+EAI
Sbjct: 401 PVEAI 405
>gi|86143876|ref|ZP_01062244.1| ABC-type transport systems, involved in lipoprotein release,
permease component [Flavobacterium sp. MED217]
gi|85829583|gb|EAQ48046.1| ABC-type transport systems, involved in lipoprotein release,
permease component [Leeuwenhoekiella blandensis MED217]
Length = 417
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 313 DNEAWHHIVIKLKDSSKTQSVIKTLNDWFKE------EGISARAVNWERGMAMYYSAIEG 366
+ A+ I IK KD L ++ E + +N G+ + I G
Sbjct: 228 NKSAFPQITIKPKDGVDIAEFNAILEQRLRQLRGLRPEETNTFFINQLSGLTDFIDNITG 287
Query: 367 TRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFM 425
T + + S++V I N + V+V +R++ IG +A+GAK F+ F ES +
Sbjct: 288 TMSTIGGFIGLFSLLVGGFGIANIMFVSVKERTNLIGIQKALGAKNRFILLQFLFESVIL 347
Query: 426 SCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGL 485
+ +G LIGL L I A V++ F GD +S + ++ +++ ++ GL
Sbjct: 348 ATIGGLIGLTLVWIIAQVMSQF---TGD----------FEFVLSATNVIFGLSSSIIIGL 394
Query: 486 AANWYPVRLALKISPLEAI 504
A P +A ++ P+EAI
Sbjct: 395 IAGIVPAFMASRLDPVEAI 413
>gi|114331336|ref|YP_747558.1| protein of unknown function DUF214 [Nitrosomonas eutropha C91]
gi|114308350|gb|ABI59593.1| protein of unknown function DUF214 [Nitrosomonas eutropha C91]
Length = 400
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 18/140 (12%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
L + +A++S+ V I++MN ++V+V QR++EIG ++AIG +R IF AE+ ++S
Sbjct: 275 LGVAGIAVISLAVAGILVMNVMLVSVSQRTAEIGLLKAIGTPAAVIRYIFLAEAVWLSLA 334
Query: 429 GVLIGLVLALIAA-AVVNAFDIRVG-DILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLA 486
G L G +L + A+ A+ + L A F G +G AV LAG+
Sbjct: 335 GALAGFILGQAGSWALRLAYPLLPAWPPLWANFAG--------VGVAV-------LAGVL 379
Query: 487 ANWYPVRLALKISPLEAINR 506
A P A K+ P++A+ +
Sbjct: 380 AGLLPAIRAAKLDPVDALGK 399
>gi|118045400|ref|ZP_01514061.1| protein of unknown function DUF214 [Chloroflexus aggregans DSM
9485]
gi|117998131|gb|EAV12312.1| protein of unknown function DUF214 [Chloroflexus aggregans DSM
9485]
Length = 416
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 357 MAMYYSAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVR 415
+A +AI G FI ++A +S+VV I IMN ++VAV +R+ EIG +A+GA G V
Sbjct: 283 LAAISTAITG----FIAVVAGISLVVGGIGIMNIMLVAVTERTREIGVRKALGASDGDVL 338
Query: 416 KIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVW 475
F E+ +S VG LIG++ A+ +++A GG I IS V
Sbjct: 339 GQFVMEAVALSLVGSLIGVIGAIGLVWLISA------------VGG--INTGISWIGIVL 384
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAI 504
+ G+ +YP R A + P+EA+
Sbjct: 385 ALGFASAIGIGFGYYPARRAALLPPIEAL 413
>gi|92089466|ref|ZP_01274408.1| conserved hypothetical protein [Lactobacillus reuteri 100-23]
gi|91803763|gb|EAS88620.1| conserved hypothetical protein [Lactobacillus reuteri 100-23]
Length = 660
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 120/263 (45%), Gaps = 55/263 (20%)
Query: 245 LADMTMGARVAAAIPDSVDLSLSEKSEDELFADDSGADI--IDTVQNSNSKIDYENLLGS 302
+A +T GA +I S +L +K+ A+ ++ +D VQ +KID NL GS
Sbjct: 447 VAGITEGASAGTSITYSTMRALLQKANASTAANFVTVNVTNLDNVQGVANKID--NLRGS 504
Query: 303 TELRDRLNLADNEAWHHIVIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYS 362
R + + S++KT+N Y
Sbjct: 505 NNKR-----------------ILGAITVGSILKTVNT---------------------YV 526
Query: 363 AIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAES 422
++ T + I +++L ++I++ T+ ++V +R+ EIG +RA+G +K +R++F +ES
Sbjct: 527 SLASTVLASIAGISLLVSALMIIV--TMYMSVSERTKEIGILRALGERKKDIRRLFTSES 584
Query: 423 FFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGG-KQIRVSISIGSAVWTMAAML 481
F+ ++ L++ + ++N A++G K V I++G+ ++ + +
Sbjct: 585 VFIGLFSAILALLIVAVVTVIIN----------HALYGLIKYNIVQITVGNVIFAIVIAI 634
Query: 482 LAGLAANWYPVRLALKISPLEAI 504
+ A +P R A ++P++A+
Sbjct: 635 VISFIAALFPARRAANLNPIDAL 657
>gi|118728193|ref|ZP_01576760.1| protein of unknown function DUF214 [Clostridium cellulolyticum H10]
gi|118662413|gb|EAV69107.1| protein of unknown function DUF214 [Clostridium cellulolyticum H10]
Length = 833
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 370 LFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
+F + + + ++VI N+ ++VM+R G +R+IGA K +R++ F E+ MS +
Sbjct: 250 IFAIIAGFVVICTVVVIYNSFNISVMERIKHFGILRSIGATKAQIRRLVFKEAAIMSAIS 309
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAML--LAGLAA 487
+ IG++ A + F + + L A I V +AA+L +
Sbjct: 310 IPIGIIAGF--AGIFITFRLFMNGFLGAF--------EIGFYPKVIIVAAILGIFTVFIS 359
Query: 488 NWYPVRLALKISPLEAI 504
++P R A K+SP++AI
Sbjct: 360 AFFPARTASKVSPIDAI 376
>gi|153093880|gb|EDN74808.1| possible lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
PHL213]
Length = 421
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 353 WERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKK 411
W Y+ I+ R +++I M+ ++ V +I +TL++AV + +I +R +GA
Sbjct: 261 WIDKFGYMYNDIQLIRTVMYIAMVLVIGVACFNII-STLIMAVKDKQGDIAILRTLGANN 319
Query: 412 GFVRKIFFAESFFMSCVGVLIGLVLALIAA----AVVNAFD--IRVGDILAAMFGGKQIR 465
GF+R+IF G L GL+L +I + A++ A + V + ++ +
Sbjct: 320 GFIRRIFLWYGLISGMKGALFGLILGVILSLNLTAIIKAIEAFFEVKLLSDGVYFVDFLP 379
Query: 466 VSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEAIN 505
+ V+ +AA ++ L A+ YP A K+ P + ++
Sbjct: 380 SELHWQDVVYVLAATIILSLFASLYPANRAAKLEPAKVLS 419
>gi|37526702|ref|NP_930046.1| Lipoprotein releasing system transmembrane protein lolE
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|36786134|emb|CAE15186.1| Lipoprotein releasing system transmembrane protein lolE
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 415
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 352 NWERGMAMYYSAIEGTR-ILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAK 410
+W R Y I+ R I+++ M+ ++ V ++ +TL++AV +SS+I +R +GAK
Sbjct: 254 SWIRNYGYMYHDIQMVRSIMYLAMILVIGVACFNIV-STLIMAVKDKSSDIAILRTLGAK 312
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAF---------------DIRVGDIL 455
+R +F G + G V ++A+ + A D+ D L
Sbjct: 313 DRQIRAVFLWYGLLTGMTGSIAGAVAGVLASLNLTALIHGLEKLIGHQFLSGDVYFIDFL 372
Query: 456 AAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISP 500
+ G + ++ +A L+ L A+WYP R A ++ P
Sbjct: 373 PSELHGMDV---------LYVLATALILSLLASWYPARRASRLDP 408
>gi|114763440|ref|ZP_01442847.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. HTCC2601]
gi|114543978|gb|EAU46989.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. HTCC2601]
Length = 428
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 374 MLAILSVVVLIVIMNT---LVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGV 430
M ILSV+VLI MN L++ V + +IG +R +G +G V ++FF F +G
Sbjct: 286 MFVILSVLVLIATMNIVSGLIMLVKNKGRDIGILRTMGLTEGAVLRVFFICGAFTGVIGT 345
Query: 431 LIGLVLALIAAAVVNAFDIRVGDILA------AMFGGKQIRVSISIGSAVWTMAAMLLAG 484
L+G+VL + A ++ V + A+ G + + +G + MA L
Sbjct: 346 LMGVVLGCLFAIYIDPIFSFVNYVAGGGVWDPAVRGIYALPAKLQMGDVLSAMALSLGLS 405
Query: 485 LAANWYPVRLALKISPLEAI 504
+P R A +++P+EA+
Sbjct: 406 FVVTIFPARRAARMNPVEAL 425
>gi|68553449|ref|ZP_00592823.1| ABC transporter:Protein of unknown function DUF214
[Prosthecochloris aestuarii DSM 271]
gi|68239628|gb|EAN21915.1| ABC transporter:Protein of unknown function DUF214
[Prosthecochloris aestuarii DSM 271]
Length = 653
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 359 MYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIF 418
M S E +L ++ AI VV I IMN ++V+V +R+ EIG +AIGA+K + F
Sbjct: 519 MMTSTTETMSLLLGSIAAISLVVGGIGIMNIMLVSVTERTREIGLRKAIGARKSDIMLQF 578
Query: 419 FAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMA 478
ES M+ G LIG IAA ++ + V F G ++ S+ S +
Sbjct: 579 IVESVGMTLTGGLIG-----IAAGAGVSWALSV-------FAGWSVKTSLF--SVLLATT 624
Query: 479 AMLLAGLAANWYPVRLALKISPLEAI 504
+L GL +P R A + P+EA+
Sbjct: 625 FSMLIGLFFGLWPARKAADLKPVEAL 650
>gi|148263720|ref|YP_001230426.1| protein of unknown function DUF214 [Geobacter uraniumreducens Rf4]
gi|146397220|gb|ABQ25853.1| protein of unknown function DUF214 [Geobacter uraniumreducens Rf4]
Length = 850
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 385 VIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVV 444
+I N VAV +R +IGT+RA+GA V+ +F AE+ + VG ++G L +
Sbjct: 273 LIFNAFNVAVNRRRRDIGTLRALGATPRQVQALFLAEALVIGIVGGILG---CLAGTTLS 329
Query: 445 NAFDIRVGDILAAMFG-GKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEA 503
F +G ++G V + G A+ +M LLA L W P A +ISP EA
Sbjct: 330 QGFLQMMGQTTETVYGVTSSGAVHLPPGIALESMVLGLLASLVGAWGPALAASRISPTEA 389
Query: 504 INR 506
+ +
Sbjct: 390 LAK 392
>gi|71065140|ref|YP_263867.1| ABC macrolide efflux transporter MacB, fused ATPase and inner
membrane domains [Psychrobacter arcticus 273-4]
gi|122064328|sp|Q4FU75|MACB_PSYAR Macrolide export ATP-binding/permease protein macB
gi|71038125|gb|AAZ18433.1| ABC macrolide efflux transporter MacB, fused ATPase and inner
membrane domains [Psychrobacter arcticus 273-4]
Length = 665
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 384 IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAV 443
I +MN ++V+V +R++EIG A+GA++ + + F E+ + +G L+G+ +A +
Sbjct: 554 IGVMNIMLVSVTERTNEIGVRMAVGARQSDIMQQFLIEAVLVCILGGLLGIGMAFAIGEL 613
Query: 444 VNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLEA 503
+N RV GG +V S S + L G+ + P R A K+ P+EA
Sbjct: 614 IN----RV--------GGDSFKVIYSSTSIIAAFVCSTLIGVVFGFLPARNAAKLDPVEA 661
Query: 504 INR 506
++R
Sbjct: 662 LSR 664
>gi|28870017|ref|NP_792636.1| macrolide ABC efflux protein MacB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|81840156|sp|Q881Q1|MACB2_PSESM Macrolide export ATP-binding/permease protein macB 2
gi|28853263|gb|AAO56331.1| macrolide ABC efflux protein MacB [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 668
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 375 LAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIG 433
+A++S+VV I +MN ++V+V +R+ EIG A+GA++ +R+ F E+ + +G +IG
Sbjct: 548 IAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLMGGVIG 607
Query: 434 LVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVR 493
+ L+ + F +Q + S+ S V A L G+ + P R
Sbjct: 608 IGLSYAIGYLFTLF-------------VQQWEMVFSLASVVTAFACSTLIGVLFGFVPAR 654
Query: 494 LALKISPLEAINR 506
A ++ P+EA+ R
Sbjct: 655 NAARLDPIEALAR 667
>gi|126667501|ref|ZP_01738472.1| transmembrane ATP-binding ABC transporter protein [Marinobacter sp.
ELB17]
gi|126628093|gb|EAZ98719.1| transmembrane ATP-binding ABC transporter protein [Marinobacter sp.
ELB17]
Length = 649
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 355 RGMAMYYSAIEGTRILFITMLAILSVVVLIV----IMNTLVVAVMQRSSEIGTMRAIGAK 410
R MA + T+ +L ++ + L+V +MN ++V+V +R+ EIG A GA+
Sbjct: 508 RNMASLIDTVSDTQDTLTWLLGSIAAISLLVGGIGVMNIMLVSVTERTREIGIRMATGAR 567
Query: 411 KGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISI 470
+ + F E++ +S +G +IG++L + A +V FD V +++
Sbjct: 568 TRNILQQFLTEAWLVSAIGGVIGVILGIAATQIVGWFD---------------TPVVVTV 612
Query: 471 GSAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
V + GL + P R A + P++A+
Sbjct: 613 FPMVLAFSCAFGTGLLFGYLPARKAAHLDPVQAL 646
>gi|52843116|ref|YP_096915.1| ABC transporter, permease [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630227|gb|AAU28968.1| ABC transporter, permease [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 415
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 321 VIKLKDSSKTQSVIKTLNDWFKEEGISARAVNWERGMAMYYSAIEGTRILFITMLAILSV 380
V+ LK S VI + + + + + + R +++E +F +LA++
Sbjct: 241 VLLLKPDSPIDEVINEIKEIINSQ--APKLSVFPRSAKQIIASMENQGRIFTLLLAVIGG 298
Query: 381 VVLIV----IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVL 436
+ L+V +MN ++V+V +R EIG +A+GAK ++ +F ES +S +G ++G++L
Sbjct: 299 ISLLVGGIGVMNVMLVSVSERKKEIGIRKAVGAKNREIQALFLVESVMLSLLGGVLGVIL 358
Query: 437 ALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLAL 496
LI +V F +I + + G+ +YP R A
Sbjct: 359 GLIFTRIVAYF--------------SDWTFTIYLLPPIAGFLVSAATGIFFGFYPARRAS 404
Query: 497 KISPLEAI 504
K+ P+ ++
Sbjct: 405 KLEPMVSL 412
>gi|150403456|ref|YP_001330750.1| protein of unknown function DUF214 [Methanococcus maripaludis C7]
gi|150034486|gb|ABR66599.1| protein of unknown function DUF214 [Methanococcus maripaludis C7]
Length = 415
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 371 FITMLAILSVVVLIV-IMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
F++ +A +S++V + I NT+ V++++ EIG M+AIGAK + +F S + VG
Sbjct: 286 FLSAIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVG 345
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
++GL+L I + ++ F I ++M + +SIS S V + + L AG+ A
Sbjct: 346 GILGLILGTIISQIIVWF------IASSMDSSYEFVLSIS--SVVIAIGSSLAAGIIAGI 397
Query: 490 YPVRLALKISPLEAI 504
P A K+ P++A+
Sbjct: 398 IPAYNASKLKPVDAL 412
>gi|149922453|ref|ZP_01910886.1| hypothetical protein PPSIR1_07723 [Plesiocystis pacifica SIR-1]
gi|149816733|gb|EDM76224.1| hypothetical protein PPSIR1_07723 [Plesiocystis pacifica SIR-1]
Length = 411
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 345 GISARAVNWERGM---AMYYSAIEGTRILFITMLAILSVVVLIVIMNTLVVAVMQRSSEI 401
G S A+ W + A + S EG ++ M AI++V++ I NT+ V+VM+R E
Sbjct: 243 GESVSALPWSGALPDLAAFVSVKEGGNVV---MQAIITVLIAAGIFNTMFVSVMERMREF 299
Query: 402 GTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAAVVNAFDIRVGDIL--AAMF 459
G + AIG + + + ES +++ G++ G+VL + I ++ A
Sbjct: 300 GILAAIGFSRVQLFALIVWESLWVALCGLIAGVVLTAYPYYYLATTGIDTAELAGQGAQV 359
Query: 460 GGKQIRVSISIG----SAVWTMAAMLLAGLAANWYPVRLALKISPLEAI 504
G + + +G AV A++ A LAA YP A ++SP+E I
Sbjct: 360 SGVTMPAVMYVGLYPPHAVVIAGAIVFATLAAGLYPAYRAGRVSPVEVI 408
>gi|157083646|gb|ABV13324.1| hypothetical protein CKO_02201 [Citrobacter koseri ATCC BAA-895]
Length = 648
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 20/141 (14%)
Query: 370 LFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCV 428
LF+T++A++S+VV I +MN ++V+V +R+ EIG A+GA+ V + F E+ + V
Sbjct: 523 LFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLV 582
Query: 429 GVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAML---LAGL 485
G +G+ L+++ A + F G +I S V + A L G+
Sbjct: 583 GGALGIGLSMLIAFTLQMF-----------LPGWEIGF-----SPVALLTAFLCSTFTGI 626
Query: 486 AANWYPVRLALKISPLEAINR 506
W P R A ++ P++A+ R
Sbjct: 627 LFGWLPARNAARLDPVDALAR 647
>gi|19704163|ref|NP_603725.1| ABC transporter permease protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714379|gb|AAL95024.1| ABC transporter permease protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 408
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 23/149 (15%)
Query: 361 YSAIEGTRILFITMLAILSVVVL-IVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFF 419
+ I T LF+T+ A +S++V I +MN ++V V++R+ EIG +A+GAK + K F
Sbjct: 275 FDKILSTLSLFVTLAASISLLVGGIGVMNIMLVTVVERTKEIGIRKALGAKNRDILKQFL 334
Query: 420 AESFFMSC----VGVLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVW 475
ES ++ VG+ IG++ L+ VV + +F I VS+SI V
Sbjct: 335 FESIILTVFGGLVGIFIGILFGLLTGVVVG---------IKPIFSMVSIIVSLSISVVV- 384
Query: 476 TMAAMLLAGLAANWYPVRLALKISPLEAI 504
G+ P R A K++P++A+
Sbjct: 385 --------GVIFGVSPARRAAKLNPIDAL 405
>gi|73668226|ref|YP_304241.1| ABC transporter, permease protein [Methanosarcina barkeri str.
Fusaro]
gi|72395388|gb|AAZ69661.1| ABC transporter, permease protein [Methanosarcina barkeri str.
Fusaro]
Length = 404
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 15/135 (11%)
Query: 371 FITMLAILSVVV-LIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVG 429
F+ +LA++S+ V I IMN ++V V +R+ EIG M+++G + +F ES +S G
Sbjct: 281 FLLVLALISLFVGSIGIMNIMLVTVTERTREIGIMKSVGYSNSNILSLFLLESVMVSSFG 340
Query: 430 VLIGLVLALIAAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANW 489
L+G V+ + A+ + + L +F I + I++ +L G+ A
Sbjct: 341 GLVGTVIGGLG-----AYALEITLKLPPVFPLALIEIGIAVS---------VLVGVTAGL 386
Query: 490 YPVRLALKISPLEAI 504
YP R A +++P++A+
Sbjct: 387 YPARKAARMNPVDAL 401
>gi|81429032|ref|YP_396032.1| Putative drug ABC exporter, ATP-binding and
membrane-spanning/permease subunits [Lactobacillus sakei
subsp. sakei 23K]
gi|78610674|emb|CAI55725.1| Putative drug ABC exporter, ATP-binding and
membrane-spanning/permease subunits [Lactobacillus sakei
subsp. sakei 23K]
Length = 646
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 380 VVVLIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALI 439
+V I+I+ L ++V +R+ EIG +RAIGA+K +R +F +E+F + ++G ++A
Sbjct: 528 LVSAIMIIVVLYISVSERTKEIGILRAIGARKKDIRYLFVSEAFLIGLFSSVLGALIAWG 587
Query: 440 AAAVVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKIS 499
A+VN ++A I V+I+ G ++ + ++ L A P R A K+
Sbjct: 588 GQALVN--------VIAQPLTHMPI-VAITSGYVIFGIVISVVISLLAALAPSRKAAKLD 638
Query: 500 PLEAI 504
P+EA+
Sbjct: 639 PIEAL 643
>gi|154491749|ref|ZP_02031375.1| hypothetical protein PARMER_01365 [Parabacteroides merdae ATCC
43184]
gi|154087990|gb|EDN87035.1| hypothetical protein PARMER_01365 [Parabacteroides merdae ATCC
43184]
Length = 430
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 383 LIVIMNTLVVAVMQRSSEIGTMRAIGAKKGFVRKIFFAESFFMSCVGVLIGLVLALIAAA 442
+I + N ++V V +R+ EIG RAIGAK + +ES ++ + LIGL + +
Sbjct: 309 IIGVSNIMMVTVRERTREIGVRRAIGAKPFDIISQIMSESLLLTSLAGLIGLSVGVFLLD 368
Query: 443 VVNAFDIRVGDILAAMFGGKQIRVSISIGSAVWTMAAMLLAGLAANWYPVRLALKISPLE 502
VVN GD+ F I IG+AV +L +GL A P A++I ++
Sbjct: 369 VVNNAMASDGDVSNDTFFSNP---EIHIGTAVAATVILLFSGLLAGLIPAWRAMQIKAID 425
Query: 503 AI 504
AI
Sbjct: 426 AI 427
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.321 0.137 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,680,321,677
Number of Sequences: 5470121
Number of extensions: 70092574
Number of successful extensions: 219960
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 831
Number of HSP's that attempted gapping in prelim test: 218832
Number of HSP's gapped (non-prelim): 1390
length of query: 506
length of database: 1,894,087,724
effective HSP length: 137
effective length of query: 369
effective length of database: 1,144,681,147
effective search space: 422387343243
effective search space used: 422387343243
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 132 (55.5 bits)